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Search of human proteins with 239749652
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749652 PREDICTED: hypothetical protein [Homo sapiens]
(60 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749652 PREDICTED: hypothetical protein [Homo sapiens] 125 6e-30
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-07
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-06
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-06
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-05
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 45 1e-05
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 45 1e-05
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 45 1e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 45 2e-05
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 45 2e-05
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 44 2e-05
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 44 2e-05
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 44 2e-05
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 44 3e-05
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 44 4e-05
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 44 4e-05
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 44 4e-05
gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo sapi... 44 4e-05
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-05
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 43 6e-05
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 43 6e-05
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 42 8e-05
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 42 8e-05
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 42 8e-05
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 42 8e-05
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 42 8e-05
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 42 1e-04
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 41 2e-04
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 41 2e-04
gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens] 41 2e-04
>gi|239749652 PREDICTED: hypothetical protein [Homo sapiens]
Length = 60
Score = 125 bits (315), Expect = 6e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR
Sbjct: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 50.4 bits (119), Expect = 3e-07
Identities = 19/37 (51%), Positives = 33/37 (89%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ERKR ++R++K+ KERK+E+E+G +E+KRKK K+++
Sbjct: 131 RERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEE 167
Score = 47.0 bits (110), Expect = 3e-06
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 7/45 (15%)
Query: 3 GGKERKRGRKRERKKEKERK-KEREKGNKE------KKRKKEKEK 40
G KE+K+ +KRER KE+ERK KEREK KE +KRKKEK+K
Sbjct: 59 GKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKK 103
Score = 46.2 bits (108), Expect = 6e-06
Identities = 20/41 (48%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRER-KKEKERKKEREKGNKEKKRKKEKEKDHLE 44
+ER++ RKRER KKEK+++K+RE+G + ++++KE+EK E
Sbjct: 48 REREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKE 88
Score = 45.8 bits (107), Expect = 7e-06
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E KER+ KR+R++EKERK+ER K K+K++K+E+ K+
Sbjct: 35 ERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKE 74
Score = 44.3 bits (103), Expect = 2e-05
Identities = 21/44 (47%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EGGKERKRGRK-RERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E GKER+R RK RE+++++ R+KER K KEKK+++ K++ E
Sbjct: 70 ERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRE 113
Score = 43.9 bits (102), Expect = 3e-05
Identities = 16/40 (40%), Positives = 32/40 (80%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
KER+ +R+RKKEK++++ +++G +E+K+KKE+++ E
Sbjct: 87 KERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERE 126
Score = 43.5 bits (101), Expect = 4e-05
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK---GNKEKKRKKEKEKDHLEWVVTPRNGFQAIR 57
E K+R+R RK ERKKE+ERK+ RE+ KE+++KKE++KD T F+ +R
Sbjct: 167 EREKKRERNRK-ERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLR 224
Score = 43.1 bits (100), Expect = 5e-05
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K RK+ R++ERK+EKER K K K KK ++EK+++
Sbjct: 137 KRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRE 173
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/40 (47%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
K+R+RG++RERK+ KER+K+R++ ++++RK++KEK E
Sbjct: 67 KKRERGKERERKR-KEREKQRKERREKERRKRKKEKKKRE 105
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/37 (48%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 5 KER-KRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
KER KR RKR+++K++ER+K+RE+ KE+K+++E+++
Sbjct: 151 KERGKRERKRKKRKKEEREKKRERNRKERKKERERKE 187
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/36 (52%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+ERK+ +RERKK+KER KERE+ NK+++ +K K++
Sbjct: 104 RERKQRGRRERKKKKER-KERERENKQRRERKRKKR 138
Score = 41.6 bits (96), Expect = 1e-04
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Query: 5 KERKRGR---KRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
KERKR + KRERK++K +K+EREK + +++++KE++ E
Sbjct: 145 KERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKE 187
Score = 40.8 bits (94), Expect = 2e-04
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+R+ RK+ER++ ++RK+EREK K ++ KKEK+K
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKK 65
Score = 39.7 bits (91), Expect = 5e-04
Identities = 14/38 (36%), Positives = 31/38 (81%)
Query: 3 GGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
G +ERKR ++++ ++EK+R++ R++ KE++RK+ +E+
Sbjct: 154 GKRERKRKKRKKEEREKKRERNRKERKKERERKERRER 191
Score = 38.5 bits (88), Expect = 0.001
Identities = 13/37 (35%), Positives = 29/37 (78%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++RK+ +K ER+K++ER ++ K +E+K ++E++K+
Sbjct: 158 RKRKKRKKEEREKKRERNRKERKKERERKERRERKKE 194
Score = 37.4 bits (85), Expect = 0.003
Identities = 15/40 (37%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E GK R+R RK+ +K+E+E+K+ER + ++K+R++++ ++
Sbjct: 152 ERGK-RERKRKKRKKEEREKKRERNRKERKKERERKERRE 190
Score = 36.2 bits (82), Expect = 0.006
Identities = 12/36 (33%), Positives = 30/36 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+++KR RK+ ++E+++KKER++ +E K+++E+++
Sbjct: 100 EKKKRERKQRGRRERKKKKERKERERENKQRRERKR 135
Score = 35.8 bits (81), Expect = 0.008
Identities = 16/41 (39%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDH 42
E ++ +R RK+E+KK +ERK+ + K+KK +KE+E+++
Sbjct: 88 ERREKERRKRKKEKKK-RERKQRGRRERKKKKERKEREREN 127
Score = 35.8 bits (81), Expect = 0.008
Identities = 12/40 (30%), Positives = 32/40 (80%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
+++KR ++R+R+KE+ +++ + K K+++R+K++E++ E
Sbjct: 139 RKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE 178
Score = 35.4 bits (80), Expect = 0.010
Identities = 14/40 (35%), Positives = 31/40 (77%), Gaps = 4/40 (10%)
Query: 5 KERKRGRKRERKKEKERKKE----REKGNKEKKRKKEKEK 40
+E +R ++R +++++R++E RE+G KEKK++K++E+
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRKKRER 71
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 16 KKEKERKKEREKGNKEKK-RKKEKEKD 41
++E ERKKER + K K+ R+KE++++
Sbjct: 31 QRESERKKERREREKRKREREKERKRE 57
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 47.0 bits (110), Expect = 3e-06
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 4 GKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
GKER R R R+ +++KERKKER+K KEKK+++++ +D
Sbjct: 242 GKERDRERDRKEERKKERKKERKKERKEKKKEEKRRED 279
Score = 45.1 bits (105), Expect = 1e-05
Identities = 21/38 (55%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
Query: 5 KERKRGRKRERKKE--KERKKEREKGNKEKKRKKEKEK 40
++R+R RK ERKKE KERKKER++ KE+KR+++K++
Sbjct: 245 RDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKR 282
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRK 35
+ERK+ RK+ERKKE++ KK+ EK ++KKRK
Sbjct: 253 EERKKERKKERKKERKEKKKEEKRREDKKRK 283
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/36 (44%), Positives = 29/36 (80%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
++R R R +ER +E++RK+ER+K K++++K+ KEK
Sbjct: 235 RQRDRDRGKERDRERDRKEERKKERKKERKKERKEK 270
Score = 40.8 bits (94), Expect = 2e-04
Identities = 17/40 (42%), Positives = 31/40 (77%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
++R + R RER +++ERKKER+K K+++++K+KE+ E
Sbjct: 239 RDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRRE 278
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
K+ + R RER+K+K R++ER++G +E++R +++EK+ R+G + T+R
Sbjct: 117 KQTEIERDREREKQKGRERERDRG-RERERDRDREKERERQTEKDRDGQRETETER 171
Score = 39.7 bits (91), Expect = 5e-04
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKE---KKRKKEKEKDHLE 44
EG +E R R+R+R +++ ++++RE+ KE K+RKKE++K+ E
Sbjct: 224 EGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKE 269
Score = 38.5 bits (88), Expect = 0.001
Identities = 16/45 (35%), Positives = 33/45 (73%), Gaps = 7/45 (15%)
Query: 4 GKERKRGRKRERKKEKERKKEREK-------GNKEKKRKKEKEKD 41
G+ER+R R RER+++++R+KERE+ G +E + ++E++++
Sbjct: 132 GRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDRE 176
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 6 ERKRGRKRERKKEKERKKEREKG-----NKEKKRKKEKEKDHLEWVVTPR 50
E +R R RER+K+KER+ ER++ KE++R+ ++E+D T R
Sbjct: 168 ETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTER 217
Score = 36.6 bits (83), Expect = 0.004
Identities = 17/40 (42%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K++ R R+R+R +E+ER ++RE KE++R+ EK++D
Sbjct: 126 EREKQKGRERERDRGRERERDRDRE---KERERQTEKDRD 162
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 2 EGGKERKRGRKRERK-KEKERKKEREKGNK-EKKRKKEKEK 40
E ++RKR R+R RK KE R ++REK + E+ R++EK+K
Sbjct: 91 ERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQK 131
Score = 34.7 bits (78), Expect = 0.017
Identities = 16/41 (39%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKERE-KGNKEKKRKKEKEKD 41
E ++R R ++RER+ EK+R +RE + +E+ R++EK+K+
Sbjct: 142 ERERDRDREKERERQTEKDRDGQRETETERERDREREKQKE 182
Score = 34.3 bits (77), Expect = 0.022
Identities = 13/40 (32%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+G +E + R+R+R++EK++++E E+ +++++R EKE++
Sbjct: 162 DGQRETETERERDREREKQKERETER-DRDRQRDTEKERE 200
Score = 33.5 bits (75), Expect = 0.038
Identities = 13/38 (34%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 5 KERKRGR-KRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER R R K E++++++RK++RE+ KEK+ + ++++
Sbjct: 79 RERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDRE 116
Score = 33.1 bits (74), Expect = 0.049
Identities = 12/36 (33%), Positives = 26/36 (72%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E++R R R+R +E+ RK++ N++++++ E E+D
Sbjct: 89 EKERDRDRKRDRERRRKEKETNRNRDREKQTEIERD 124
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 15/52 (28%)
Query: 4 GKERKRGRKRERKKEK--------------ERKKEREKGNKEKKRKKEKEKD 41
G+ER+R R RE+++E+ ER+++RE+ K+K+R+ E+++D
Sbjct: 140 GRERERDRDREKERERQTEKDRDGQRETETERERDRER-EKQKERETERDRD 190
Score = 33.1 bits (74), Expect = 0.049
Identities = 13/36 (36%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
ER R R+R+ +KE+ER+ +RE+ ++++K + E++++
Sbjct: 186 ERDRDRQRDTEKERERQTDRER-DRQRKTQTERQRE 220
Score = 32.0 bits (71), Expect = 0.11
Identities = 14/43 (32%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG---NKEKKRKKEKEKD 41
E +E R +RE + +ER+++R++G ++E+ RK+E++K+
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKE 258
Score = 31.6 bits (70), Expect = 0.14
Identities = 10/35 (28%), Positives = 27/35 (77%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
++ ++ R R+RK+++ER+++ ++ N+ + R+K+ E
Sbjct: 86 EKTEKERDRDRKRDRERRRKEKETNRNRDREKQTE 120
Score = 30.0 bits (66), Expect = 0.42
Identities = 14/60 (23%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
E ++ +R + ER++++ER+K++E+ +++ R+++ EK+ R+ + +T+R
Sbjct: 158 EKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTER 217
Score = 30.0 bits (66), Expect = 0.42
Identities = 12/53 (22%), Positives = 32/53 (60%), Gaps = 13/53 (24%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-------------GNKEKKRKKEKEKD 41
E ++R+R ++ER+++ +R+++R++ G +E R++E+++D
Sbjct: 186 ERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRD 238
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/35 (25%), Positives = 24/35 (68%)
Query: 10 GRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
G R+R++++ R+K ++ ++++KR +E+ + E
Sbjct: 74 GDDRQRERDRVREKTEKERDRDRKRDRERRRKEKE 108
Score = 26.2 bits (56), Expect = 6.0
Identities = 8/34 (23%), Positives = 23/34 (67%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K ++R+R ++++R++ R++ + R +EK+ +
Sbjct: 87 KTEKERDRDRKRDRERRRKEKETNRNRDREKQTE 120
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 46.6 bits (109), Expect = 4e-06
Identities = 18/36 (50%), Positives = 33/36 (91%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
KE+++ +++E++KEKE++KE+EK K+KK+KK+K+K
Sbjct: 74 KEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKK 109
Score = 46.6 bits (109), Expect = 4e-06
Identities = 18/36 (50%), Positives = 33/36 (91%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
KE+++ +++E++KEKE++KE+EK K+KK+KK+K+K
Sbjct: 76 KEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKK 111
Score = 43.5 bits (101), Expect = 4e-05
Identities = 17/38 (44%), Positives = 33/38 (86%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
E KE+++ +++E++KEKE++KE++K K+KK+KK+K+
Sbjct: 75 EKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKK 112
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/39 (43%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E KE+++ +++E++KEKE+KK+++K K+KK+KK K
Sbjct: 79 EKEKEKEKEKEKEKEKEKEKKKKKKK-KKKKKKKKLNAK 116
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/25 (64%), Positives = 23/25 (92%), Gaps = 1/25 (4%)
Query: 17 KEKERKKEREKGNKEKKRKKEKEKD 41
KEKE++KE+EK KEK+++KEKEK+
Sbjct: 74 KEKEKEKEKEK-EKEKEKEKEKEKE 97
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 11 RKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+K KE++KE+EK KEK+++KEKEK+
Sbjct: 66 KKTTTTTTKEKEKEKEK-EKEKEKEKEKEKE 95
Score = 29.6 bits (65), Expect = 0.55
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E++ KR RKK+ +KK+++K +KK+K +K
Sbjct: 18 EKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKK 52
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKE 37
KRGRK++ K+K++KK K K+ KK+
Sbjct: 24 KRGRKKKTTKKKKKKKTTMKKKKKTTTKKK 53
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+K+ + +K+ KK KEK+++KEKEK+
Sbjct: 51 KKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKE 85
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K+ +K KE+EK KEK+++KEKEK+
Sbjct: 59 KKRTTTTKKTTTTTTKEKEK-EKEKEKEKEKEKE 91
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K + +KR +K ++ KEK+++KEKEK+
Sbjct: 53 KTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKE 89
Score = 25.8 bits (55), Expect = 7.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+K+ K+++KK+ KK+++ K+K K K++
Sbjct: 28 KKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKR 61
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 45.4 bits (106), Expect = 1e-05
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
EG KER+ RK+ER++ ++RK+EREK K ++ KKEK+
Sbjct: 50 EGKKERESERKKERREREKRKREREKERKRERGKKEKK 87
Score = 44.7 bits (104), Expect = 2e-05
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+ERK RKRE +KE+ERKKE + +E+K +K++E+
Sbjct: 133 RERKEERKREERKERERKKEEREKERERKERKKRER 168
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E KER+ KR+R++EKERK+ER K K+ +RKKE+ +
Sbjct: 58 ERKKERREREKRKREREKERKRERGKKEKKGERKKEERE 96
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 4/40 (10%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKK---RKKEKEKD 41
K+R+R RK ERKKE+ERK+ RE+ + KK RKKE++KD
Sbjct: 187 KKRERNRK-ERKKERERKERRERKKERKKKEERKKERQKD 225
Score = 42.7 bits (99), Expect = 6e-05
Identities = 16/39 (41%), Positives = 32/39 (82%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E G+ K G++RERK+E++R++ +E+ K+++R+KE+E+
Sbjct: 122 ERGRTSKEGKERERKEERKREERKERERKKEEREKERER 160
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E ++ +R RK+ERKK++ERKKER+K + R+KE+ K
Sbjct: 199 ERERKERRERKKERKKKEERKKERQKDRQTNWREKERGK 237
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 5 KERKR-GRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+ERK+ G K E +KEKERK+ +++ K+RKKE+E+
Sbjct: 166 RERKQVGEKEEERKEKERKERKKRERNRKERKKERER 202
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 2 EGGKERKRGRK----RERKKEKERKKEREKGNKEKKRKKEKEK 40
E GK+ K+G + RERKK + K+ +E KEK++KKEK++
Sbjct: 80 ERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKE 122
Score = 38.5 bits (88), Expect = 0.001
Identities = 15/37 (40%), Positives = 29/37 (78%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ERK+ RK++ +++KER+K+R+ +EK+R K + K+
Sbjct: 206 RERKKERKKKEERKKERQKDRQTNWREKERGKRERKE 242
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/36 (58%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKE-KKRKKEKE 39
+ER++ RKRER K KE+K ER+K +E KKR++EKE
Sbjct: 71 REREKERKRERGK-KEKKGERKKEERERKKRRREKE 105
Score = 38.1 bits (87), Expect = 0.002
Identities = 17/44 (38%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 5 KERKRGRKRERKKEKERK----KEREKGNKEKKRKKEKEKDHLE 44
+ER++ R+R+ +K++ERK KE E+ KE+K +K++E++ E
Sbjct: 152 EEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Query: 2 EGGKERKRGRKRER-KKEKERKKEREKGNKEKKRKK---EKEKDHLE 44
E +ERKR ++ER +K++ER+KERE+ ++K+ +K EKE++ E
Sbjct: 134 ERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKE 180
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 2 EGGKERKRGRKRERKKEK----ERKKEREKGNKEKKRKKEKEKD 41
E +ERK ++ERKK + ERKKERE+ + +++K+ K+K+
Sbjct: 173 EKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKE 216
Score = 36.6 bits (83), Expect = 0.004
Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
KE K G ++E++K+KE KKER + +KE K ++ KE+
Sbjct: 104 KENKEGEEKEKRKKKE-KKERGRTSKEGKERERKEE 138
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 3 GGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
G + R R+RE + KE KKERE K+++R++EK K E
Sbjct: 33 GWQSEIREREREIETRKEGKKERESERKKERREREKRKRERE 74
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEK----KRKKEKEKDHLE 44
E + KR R+RE+++++ER K+ +KG ++K ++K+ +EK++ E
Sbjct: 62 ERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKE 108
Score = 36.2 bits (82), Expect = 0.006
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKDHLE 44
++++RGR + KE+ERK+ER++ KE++RKKE+ + E
Sbjct: 119 EKKERGRTSKEGKERERKEERKREERKERERKKEEREKERE 159
Score = 35.0 bits (79), Expect = 0.013
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
+E KE K+ R+ ERKKE+ +EREK +E+++++++E+ E
Sbjct: 45 IETRKEGKKERESERKKER---REREKRKREREKERKRERGKKE 85
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/44 (38%), Positives = 34/44 (77%), Gaps = 4/44 (9%)
Query: 2 EGGKERKRGRK-RERKKEKERKKEREK---GNKEKKRKKEKEKD 41
E KER+R ++ RE+++E++ +K+RE+ G KE++RK+++ K+
Sbjct: 142 EERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKE 185
Score = 34.7 bits (78), Expect = 0.017
Identities = 14/39 (35%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Query: 2 EGGKERKRGRKRERKKEKERK---KEREKGNKEKKRKKE 37
E KERK+ +R+++++K+R+ +E+E+G +E+K +K+
Sbjct: 207 ERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 34.3 bits (77), Expect = 0.022
Identities = 15/37 (40%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+ ++E KKE+E ++++E+ +E KRK+E+EK+
Sbjct: 41 REREIETRKEGKKERESERKKERRERE-KRKREREKE 76
Score = 33.5 bits (75), Expect = 0.038
Identities = 13/40 (32%), Positives = 28/40 (70%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
K+R+R ++ + +EKE++K++EK + + K+ KE++ E
Sbjct: 98 KKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKE 137
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E KE + +KR R+KE + +E+EK ++KK KKE+ + E
Sbjct: 89 ERKKEERERKKRRREKENKEGEEKEK--RKKKEKKERGRTSKE 129
Score = 32.3 bits (72), Expect = 0.084
Identities = 14/37 (37%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
KE + KR++K++KER + ++G KE++RK+E++++
Sbjct: 107 KEGEEKEKRKKKEKKERGRTSKEG-KERERKEERKRE 142
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 45.4 bits (106), Expect = 1e-05
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
ME +E + G + +KKEKE++KE+EK KEK+R+KEKEK
Sbjct: 99 MEKKEEEENGERPRKKKEKEKEKEKEK-EKEKEREKEKEK 137
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 16 KKEKERKKEREKGNKEKKRKKEKEKD 41
KKE+E ER + KEK+++KEKEK+
Sbjct: 101 KKEEEENGERPRKKKEKEKEKEKEKE 126
Score = 32.7 bits (73), Expect = 0.065
Identities = 13/37 (35%), Positives = 27/37 (72%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K+ + K+E ++ ER +++++ KEK+++KEKEK+
Sbjct: 94 KQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKE 130
Score = 28.9 bits (63), Expect = 0.93
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 14 ERKKEKERKKEREKGNKEKKRKKEKEKD 41
E++ K KKE E+ + ++KKEKEK+
Sbjct: 93 EKQLIKMEKKEEEENGERPRKKKEKEKE 120
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 45.4 bits (106), Expect = 1e-05
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
ME +E + G + +KKEKE++KE+EK KEK+R+KEKEK
Sbjct: 99 MEKKEEEENGERPRKKKEKEKEKEKEK-EKEKEREKEKEK 137
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 16 KKEKERKKEREKGNKEKKRKKEKEKD 41
KKE+E ER + KEK+++KEKEK+
Sbjct: 101 KKEEEENGERPRKKKEKEKEKEKEKE 126
Score = 32.7 bits (73), Expect = 0.065
Identities = 13/37 (35%), Positives = 27/37 (72%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K+ + K+E ++ ER +++++ KEK+++KEKEK+
Sbjct: 94 KQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKE 130
Score = 28.9 bits (63), Expect = 0.93
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 14 ERKKEKERKKEREKGNKEKKRKKEKEKD 41
E++ K KKE E+ + ++KKEKEK+
Sbjct: 93 EKQLIKMEKKEEEENGERPRKKKEKEKE 120
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 45.1 bits (105), Expect = 1e-05
Identities = 20/43 (46%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E +ER+R R+RER++E+ER++ERE+ +E++R+K+K++D E
Sbjct: 394 ERERERERERERERERERERERERER-EREREREKDKKRDREE 435
Score = 44.3 bits (103), Expect = 2e-05
Identities = 19/37 (51%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+R R+RER+KEKER++ERE+ ++++ R KE+++D
Sbjct: 325 REREREREREREKEKERERERER-DRDRDRTKERDRD 360
Score = 44.3 bits (103), Expect = 2e-05
Identities = 20/40 (50%), Positives = 34/40 (85%), Gaps = 3/40 (7%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RER++E+ER++ERE +E++R++E+EKD
Sbjct: 392 ERERERERERERERERERERERERE---REREREREREKD 428
Score = 43.9 bits (102), Expect = 3e-05
Identities = 19/40 (47%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RER++E+ER++ERE+ +EK +K+++E+D
Sbjct: 398 ERERERERERERERERERERERERER-EREKDKKRDREED 436
Score = 43.9 bits (102), Expect = 3e-05
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E +ER+R R+RER++E+ER++ERE+ +K+ ++E E+D E
Sbjct: 400 EREREREREREREREREREREREREREKDKKRDREEDEEDAYE 442
Score = 42.4 bits (98), Expect = 8e-05
Identities = 20/38 (52%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
Query: 5 KERKRGRKRERK-KEKERKKEREKGNKEKKRKKEKEKD 41
+ER+R R+RER+ +E+ER++ERE+ KEK+R++E+E+D
Sbjct: 312 RERERERERERRERERERERERER-EKEKERERERERD 348
Score = 41.6 bits (96), Expect = 1e-04
Identities = 20/41 (48%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
Query: 2 EGGKERKRGR-KRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R +RER++E+ER++EREK KE++R++E+++D
Sbjct: 311 ERERERERERERREREREREREREREK-EKERERERERDRD 350
Score = 41.6 bits (96), Expect = 1e-04
Identities = 16/37 (43%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+E+ R R+RER++E+ER++ERE+ +E++R++E+E++
Sbjct: 385 REKSRDRERERERERERERERER-ERERERERERERE 420
Score = 40.8 bits (94), Expect = 2e-04
Identities = 15/37 (40%), Positives = 30/37 (81%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
KER+ K R++E+ER++ERE+ +E++R++E+E++
Sbjct: 300 KERQEIEKERRERERERERERERRERERERERERERE 336
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/43 (41%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG---NKEKKRKKEKEKD 41
E +ER+R R+RE++KE+ER++ER++ KE+ R +++E+D
Sbjct: 324 EREREREREREREKEKERERERERDRDRDRTKERDRDRDRERD 366
Score = 40.0 bits (92), Expect = 4e-04
Identities = 14/40 (35%), Positives = 32/40 (80%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+G KE++R + ++E+ER++ERE+ +E++R++E+E++
Sbjct: 295 KGKKEKERQEIEKERRERERERERERERRERERERERERE 334
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/37 (40%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ R++ R RER++E+ER++ERE+ +E++R++E+E++
Sbjct: 383 RSREKSRDRERERERERERERER-ERERERERERERE 418
Score = 39.3 bits (90), Expect = 7e-04
Identities = 14/37 (37%), Positives = 30/37 (81%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++ +R R+RER++E+ER++ + +E++R+KEKE++
Sbjct: 306 EKERRERERERERERERREREREREREREREKEKERE 342
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/37 (40%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K+R R R++ R +E+ER++ERE+ +E++R++E+E++
Sbjct: 379 KDRSRSREKSRDRERERERERER-ERERERERERERE 414
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/37 (37%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ R R + R+R++E+ER++ERE+ +E++R++E+E++
Sbjct: 381 RSRSREKSRDRERERERERERER-ERERERERERERE 416
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 11/51 (21%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG-----------NKEKKRKKEKEKD 41
E +ER+R R R+R KE++R ++RE+ NK++ R +EK +D
Sbjct: 340 ERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRD 390
Score = 37.0 bits (84), Expect = 0.003
Identities = 14/39 (35%), Positives = 30/39 (76%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +ER+R R+RER++EK++K++RE+ ++ +++ E+
Sbjct: 410 EREREREREREREREREKDKKRDREEDEEDAYERRKLER 448
Score = 36.6 bits (83), Expect = 0.004
Identities = 14/40 (35%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +R + R R R+K ++R++ERE+ +E++R++E+E++
Sbjct: 372 ERSSDRNKDRSRSREKSRDRERERER-ERERERERERERE 410
Score = 36.6 bits (83), Expect = 0.004
Identities = 13/37 (35%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ + R R RE+ +++ER++ERE+ +E++R++E+E++
Sbjct: 377 RNKDRSRSREKSRDRERERERER-ERERERERERERE 412
Score = 35.8 bits (81), Expect = 0.008
Identities = 15/38 (39%), Positives = 29/38 (76%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
E +ER+R R+RER+K+K+R +E ++ + ++RK E++
Sbjct: 412 EREREREREREREREKDKKRDREEDEEDAYERRKLERK 449
Score = 34.3 bits (77), Expect = 0.022
Identities = 13/37 (35%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++R+R R R+R++ +R K+R + ++EK R +E+E++
Sbjct: 361 RDRERDRDRDRERSSDRNKDRSR-SREKSRDRERERE 396
Score = 33.5 bits (75), Expect = 0.038
Identities = 13/38 (34%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
++R R R+R + K+R + REK ++E++R++E+E++
Sbjct: 365 RDRDRDRERSSDRNKDRSRSREKSRDRERERERERERE 402
Score = 32.7 bits (73), Expect = 0.065
Identities = 11/37 (29%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER R ++R + +E+ ++RE+ +E++R++E+E++
Sbjct: 371 RERSSDRNKDRSRSREKSRDRER-ERERERERERERE 406
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDH 42
+ERK+ R+ E++ E+E ++ RE KE KR KE +D+
Sbjct: 467 RERKKTREYEKEAEREEERRREMA-KEAKRLKEFLEDY 503
Score = 30.8 bits (68), Expect = 0.25
Identities = 14/38 (36%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 8 KRGRKRERKKEKERKK-EREKGNKEKKRKKEKEKDHLE 44
K+ + + KKEKER++ E+E+ +E++R++E+E+ E
Sbjct: 289 KKLEEEKGKKEKERQEIEKERRERERERERERERRERE 326
Score = 30.0 bits (66), Expect = 0.42
Identities = 9/37 (24%), Positives = 28/37 (75%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+E K +++ER++ ++ ++ERE+ + ++ ++E+E++
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERRERERE 328
Score = 30.0 bits (66), Expect = 0.42
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE-WVVTPR 50
E +ER++ +KR+R++++E ER K ++ + K+ ++ L+ W + R
Sbjct: 420 EREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRER 469
Score = 29.6 bits (65), Expect = 0.55
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKK-EKEKDHLE 44
ME K R+ + ++ +K E EKG KEK+R++ EKE+ E
Sbjct: 269 MEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERE 313
Score = 29.6 bits (65), Expect = 0.55
Identities = 10/37 (27%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++R+R R + + + R+K R++ +E++R++E+E++
Sbjct: 369 RDRERSSDRNKDRSRSREKSRDR-ERERERERERERE 404
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 39/82 (47%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNK------------------------------- 30
E +ER+R R+RER++E+ER++EREK K
Sbjct: 402 EREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERL 461
Query: 31 --------EKKRKKEKEKDHLE 44
+K R+ EKE + E
Sbjct: 462 KNWEIRERKKTREYEKEAEREE 483
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
ME ER+R + +++ E E ++E EK KE+KR++ E++
Sbjct: 565 MEQEAERRRQPQIKQEPESE-EEEEEKQEKEEKREEPMEEE 604
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
+E +R R+ + K+E E ++E E EK+ K+EK ++ +E
Sbjct: 567 QEAERRRQPQIKQEPESEEEEE----EKQEKEEKREEPME 602
Score = 25.8 bits (55), Expect = 7.9
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 15 RKKEKERKKEREKGNKEKKRKKEK 38
+K+ ++R+KE E +++KR+KE+
Sbjct: 519 QKRLRDREKEMEADERDRKREKEE 542
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/41 (53%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNK-EKKRKKEKEKD 41
E KER++ R+R+++KEKE +KE+EK + EK+RK+EKEK+
Sbjct: 526 EREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKE 566
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/38 (47%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
+ER++ R+RE++ EKE+++EREK K+++R++EKEK+
Sbjct: 507 REREKEREREKELEKEQEQEREKEREKDRERQQEKEKE 544
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/38 (50%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
E KER+R ++ E+++E+ER+KEREK ++E++++KEKE
Sbjct: 508 EREKEREREKELEKEQEQEREKEREK-DRERQQEKEKE 544
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 11/60 (18%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKK----------EKEKDHLEWVVTPR 50
+E +E++R ++ERK+EKE++ ER+K KEK+ +K EKE++ LE + PR
Sbjct: 545 LEKEQEKQREMEKERKQEKEKELERQK-EKEKELQKMKEQEKECELEKEREKLEEKIEPR 603
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 33/45 (73%), Gaps = 5/45 (11%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKK-----RKKEKEKD 41
E +ER++ +++E +KE+E+++E EK K++K R+KEKEK+
Sbjct: 532 EKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKE 576
Score = 37.0 bits (84), Expect = 0.003
Identities = 16/34 (47%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
R+R R++ER++EKE +KE+E+ +EK+R+K++E+
Sbjct: 505 REREREKEREREKELEKEQEQ-EREKEREKDRER 537
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/30 (53%), Positives = 27/30 (90%), Gaps = 1/30 (3%)
Query: 13 RERKKEKERKKERE-KGNKEKKRKKEKEKD 41
RER++EKER++E+E + +E++R+KE+EKD
Sbjct: 505 REREREKEREREKELEKEQEQEREKEREKD 534
Score = 36.2 bits (82), Expect = 0.006
Identities = 17/40 (42%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEK 40
E +E++ +++E+++EKER+K+RE+ KEK+ +KE+EK
Sbjct: 512 EREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEK 551
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 44.7 bits (104), Expect = 2e-05
Identities = 17/36 (47%), Positives = 32/36 (88%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+R+R R+RER +EKER++ERE+ +E++R++E+E++
Sbjct: 734 DRERERERERDREKEREREREERERERERERERERE 769
Score = 43.9 bits (102), Expect = 3e-05
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 7/47 (14%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGN-------KEKKRKKEKEKD 41
E +ER+R R+RER++E+ER +EREK +E++R++EKE+D
Sbjct: 678 ERDRERERDRERERERERERDREREKERELERERAREREREREKERD 724
Score = 43.5 bits (101), Expect = 4e-05
Identities = 16/40 (40%), Positives = 33/40 (82%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E ++R R+RER++E++R+KERE+ +E++R++E+E++
Sbjct: 726 ERDRDRDHDRERERERERDREKEREREREERERERERERE 765
Score = 42.4 bits (98), Expect = 8e-05
Identities = 15/37 (40%), Positives = 32/37 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+R R+R+R+KE+ER++E + +E++R++E+E++
Sbjct: 735 RERERERERDREKEREREREERERERERERERERERE 771
Score = 41.2 bits (95), Expect = 2e-04
Identities = 17/37 (45%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
ER+R R+RER++EKER +ER++ + +++R++E+E+D
Sbjct: 708 ERERAREREREREKERDRERDRDRDHDRERERERERD 744
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/42 (42%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKDH 42
E +ER R R++ER+ E+ER +ERE+ KE+ R++++++DH
Sbjct: 692 ERERERDREREKERELERERAREREREREKERDRERDRDRDH 733
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/37 (43%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+R R+RER++E+ER++ERE+ +E+ +++E+++D
Sbjct: 754 EERERERERERERERERERERERA-RERDKERERQRD 789
Score = 40.4 bits (93), Expect = 3e-04
Identities = 13/37 (35%), Positives = 32/37 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++ R R+RER++++E+++ERE+ +E++R++E+E++
Sbjct: 731 RDHDRERERERERDREKEREREREERERERERERERE 767
Score = 39.7 bits (91), Expect = 5e-04
Identities = 17/39 (43%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +ER R R+R+R++E+ER++ER++ +EK+R+ E+E+
Sbjct: 674 ERARERDRERERDRERERERERERDR-EREKERELERER 711
Score = 38.9 bits (89), Expect = 0.001
Identities = 14/40 (35%), Positives = 30/40 (75%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER R R +R++E+ER+++REK + ++ ++E+E++
Sbjct: 722 ERDRERDRDRDHDRERERERERDREKEREREREERERERE 761
Score = 38.5 bits (88), Expect = 0.001
Identities = 15/40 (37%), Positives = 31/40 (77%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RER++E+ER++ RE+ + ++++ ++KD
Sbjct: 755 ERERERERERERERERERERERARERDKERERQRDWEDKD 794
Score = 38.5 bits (88), Expect = 0.001
Identities = 16/39 (41%), Positives = 30/39 (76%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +ER+R R+RER++E+ER +ER+K + ++ ++K+K
Sbjct: 757 ERERERERERERERERERERARERDKERERQRDWEDKDK 795
Score = 38.5 bits (88), Expect = 0.001
Identities = 19/60 (31%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK-DHLEWVVTPRNGFQAIRTQR 60
E +ER+R R+R R+++KER+++R+ +K+K R +EK + + PR+G ++++
Sbjct: 765 ERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKK 824
Score = 38.1 bits (87), Expect = 0.002
Identities = 17/36 (47%), Positives = 29/36 (80%), Gaps = 3/36 (8%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
ER R R RER++++ER++ERE +E+ R++EKE++
Sbjct: 674 ERARERDRERERDRERERERE---RERDREREKERE 706
Score = 38.1 bits (87), Expect = 0.002
Identities = 13/40 (32%), Positives = 31/40 (77%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R++ER++E+E ++ + +E++R++E+E++
Sbjct: 736 ERERERERDREKEREREREERERERERERERERERERERE 775
Score = 37.7 bits (86), Expect = 0.002
Identities = 18/40 (45%), Positives = 33/40 (82%), Gaps = 4/40 (10%)
Query: 5 KERKRGRK---RERKKEKERKKEREKGNKEKKRKKEKEKD 41
KER+R R+ RER++E+ER++ERE+ +E+ R+++KE++
Sbjct: 747 KEREREREERERERERERERERERER-ERERARERDKERE 785
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/41 (41%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
Query: 2 EGGKERKRGRKRE-RKKEKERKKEREKGNKEKKRKKEKEKD 41
E +E++R R+RE R++E+ER++ERE+ +E++R++ +E+D
Sbjct: 742 ERDREKEREREREERERERERERERER-ERERERERARERD 781
Score = 37.0 bits (84), Expect = 0.003
Identities = 15/50 (30%), Positives = 34/50 (68%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRN 51
E +ER+R R+RER +E+++++ER++ ++K + ++ ++ E + RN
Sbjct: 763 ERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN 812
Score = 36.6 bits (83), Expect = 0.004
Identities = 16/36 (44%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+R+ R RER +E+ER +ERE+ +E++R +E+EK+
Sbjct: 670 DRRDERARERDRERERDRERER-ERERERDREREKE 704
Score = 35.8 bits (81), Expect = 0.008
Identities = 17/40 (42%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Query: 2 EGGKERKRGRKRER-KKEKERKKEREKGNKEKKRKKEKEK 40
E +ER R ++RER ++E+ER++ERE+ +E++R++E+E+
Sbjct: 738 ERERERDREKEREREREERERERERER-ERERERERERER 776
Score = 34.7 bits (78), Expect = 0.017
Identities = 13/42 (30%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
+E + R+R R+RE+++++ER ++R+ +E++R++++EK+
Sbjct: 707 LERERAREREREREKERDRERDRDRDHDRERERERERDREKE 748
Score = 32.3 bits (72), Expect = 0.084
Identities = 14/41 (34%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +ER+ R +R+ E+ R+++RE+ ++E++R++E+E+D
Sbjct: 658 ERREERRVDRVDDRRDERARERDRERERDRERERERERERD 698
Score = 30.4 bits (67), Expect = 0.32
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHL 43
+ K+ R R R+R +E+ER++ER +K+R ++E++ L
Sbjct: 1326 DADKDWPRNRDRDRLRERERERER-----DKRRDLDRERERL 1362
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 4 GKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAI 56
G+ ++ RK ERK+ R +E+E KEK +K+++ E + + R Q I
Sbjct: 887 GRWKEEDRKPERKESSRRYEEQEL--KEKVSSVDKQREQTEILESSRMRAQDI 937
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 6 ERKRGRKRERKKEKERKKEREKG-----NKEKKRKKEKEKD 41
E R R+RER+ ++R+ +R+ N+++ R +E+E++
Sbjct: 1306 EHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERE 1346
Score = 26.6 bits (57), Expect = 4.6
Identities = 10/35 (28%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 11 RKRERKKEKERKKEREKGNKEKKRKKEKE---KDH 42
R+ ER+++ K++REK ++E++ ++ + +DH
Sbjct: 412 RRHERREDTRGKRDREKDSREEREYEQDQSSSRDH 446
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 16 KKEKERKKEREKGNKE--KKRKKEKEKDHLEW 45
+KE R + REK + + K+R E E++++EW
Sbjct: 113 RKESSRGRHREKEDIKITKERTPESEEENVEW 144
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 44.3 bits (103), Expect = 2e-05
Identities = 16/37 (43%), Positives = 31/37 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+E K G+++E++KEK ++KE++K KE +++KEKE++
Sbjct: 22 EEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEE 58
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/36 (47%), Positives = 30/36 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+E+KR RKR++KKE+E ++E E+ +E+K ++EKE+
Sbjct: 58 EEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEE 93
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/40 (40%), Positives = 31/40 (77%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
++RK K+++ KE E++KE+E+ K++KRK++K+K+ E
Sbjct: 35 EKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEE 74
Score = 39.3 bits (90), Expect = 7e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
++ KR K ++KK KE +K +EK +EKKRK++++K
Sbjct: 33 RKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKK 68
Score = 38.9 bits (89), Expect = 0.001
Identities = 17/36 (47%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+E++ GR+R++KK K R+KE E+ K+K+R+K K+K
Sbjct: 89 EEKEEGRRRKKKK-KRRRKEEEEEKKKKRRRKTKKK 123
Score = 38.1 bits (87), Expect = 0.002
Identities = 15/37 (40%), Positives = 29/37 (78%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+E ++ RKR+RKK+KE ++ E+ +E++ K+E+EK+
Sbjct: 56 EEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKE 92
Score = 36.6 bits (83), Expect = 0.004
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E KE++ K+ ++K K++K+E E+ +E++ ++EKE++ E
Sbjct: 50 EKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKE 92
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 13/56 (23%)
Query: 2 EGGKERKRGRKR-ERKKEKERKK------------EREKGNKEKKRKKEKEKDHLE 44
E KE KR KR E++KEKE+KK E EK K K++KK++E++ E
Sbjct: 22 EEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREE 77
Score = 35.4 bits (80), Expect = 0.010
Identities = 14/43 (32%), Positives = 31/43 (72%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E K+ K KR+ K+E+E+K++R++ K+++ ++E+E++ E
Sbjct: 41 EKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEE 83
Score = 34.7 bits (78), Expect = 0.017
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +E ++ R RKK+K+R+++ E+ K+KKR+++ +K
Sbjct: 84 EEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKK 122
Score = 34.7 bits (78), Expect = 0.017
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKK 33
E G+ RK+ +KR RK+E+E KK++ + +KK
Sbjct: 92 EEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 34.3 bits (77), Expect = 0.022
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K++K + E +E E ++E+E KEK+++K KEK+
Sbjct: 5 KKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKE 41
Score = 34.3 bits (77), Expect = 0.022
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +E++ K E ++ K++KK R K +E+K+KK + K
Sbjct: 81 EEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 32.3 bits (72), Expect = 0.084
Identities = 12/43 (27%), Positives = 29/43 (67%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
E K +++ + +++K K +KK+ E+ +E++ ++E+EK+ E
Sbjct: 48 ETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEE 90
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 2 EGGKERKRGRKRERKKEKERK---KEREKGNKEKKRKKEKEKDHLE 44
E +E + ++E K++++RK KE+EK K K+ +K KEK+ E
Sbjct: 14 EETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEE 59
Score = 32.0 bits (71), Expect = 0.11
Identities = 10/40 (25%), Positives = 30/40 (75%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
K ++ +++E+++E++++K + K KE++ ++E+E++ E
Sbjct: 45 KTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEE 84
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 2 EGGKERKRGRKRERK--KEKERKKEREKGNKEKKRKKEKEK 40
E +E + + E K K KE++KE+ K ++KK+ KE EK
Sbjct: 11 EETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEK 51
Score = 30.8 bits (68), Expect = 0.25
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +E + K E +KE+ R+++++K + K+ ++EK+K
Sbjct: 76 EEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKE-RKKEREKGNKEKKRKKEKEKD 41
+E + + E ++EKE ++KE+ K +++K KK+K K+
Sbjct: 11 EETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKE 48
Score = 29.3 bits (64), Expect = 0.71
Identities = 10/39 (25%), Positives = 26/39 (66%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +E K ++E + +++KK+R + +E+++KK++ +
Sbjct: 80 EEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRR 118
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRK-KEKEK 40
++K+ +K+E ++ +E ++ E+ KE KRK K KEK
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEK 36
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
KE + + E +E+E K+ + K +++KRK++++K
Sbjct: 8 KETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKK 43
Score = 26.9 bits (58), Expect = 3.5
Identities = 10/26 (38%), Positives = 21/26 (80%)
Query: 16 KKEKERKKEREKGNKEKKRKKEKEKD 41
KK+K++KKE E+ + ++ ++E+EK+
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKE 26
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 44.3 bits (103), Expect = 2e-05
Identities = 21/44 (47%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG---NKEKKRKKEKEKDH 42
E +E++R +++ER K K+R KEREK +KEK R++E+EK+H
Sbjct: 398 EREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEH 441
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/40 (50%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E + +++ R++ER++EKER+KE+E+G K K R KE+EKD
Sbjct: 386 EKERVKEKDREKEREREKEREKEKERG-KNKDRDKEREKD 424
Score = 43.5 bits (101), Expect = 4e-05
Identities = 19/38 (50%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
KE+ R ++RER+KE+E++KER K +++K+R+K++EKD
Sbjct: 391 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKD 428
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/41 (48%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E KE+ R R+RE++ EK+R KE+EK +KEK+R+K++ K+
Sbjct: 426 EKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKE 466
Score = 41.6 bits (96), Expect = 1e-04
Identities = 18/40 (45%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E KER + + R++++EK+R+K++EK ++E++R+KE EKD
Sbjct: 406 EKEKERGKNKDRDKEREKDREKDKEK-DREREREKEHEKD 444
Score = 40.8 bits (94), Expect = 2e-04
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNK---EKKRKKEKEKD 41
E GK + R ++RE+ +EK+++K+RE+ + EK R KEKEK+
Sbjct: 410 ERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKE 452
Score = 40.4 bits (93), Expect = 3e-04
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKDHLEWVVTPRNGFQAIRT 58
E +E+ + + RER++EKE +K+R+K KE+ ++KE+EKD + + R + RT
Sbjct: 422 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRT 479
Score = 39.7 bits (91), Expect = 5e-04
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
E K+R + +++E+ KEKER+K+R K EK++K +K + TP + A R R
Sbjct: 440 EHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR-------TPPRSYNASRRSR 491
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/34 (52%), Positives = 29/34 (85%), Gaps = 3/34 (8%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
R++ +++ER KEK+R+KERE +EK+R+KEKE+
Sbjct: 381 REKIKEKERVKEKDREKERE---REKEREKEKER 411
Score = 38.1 bits (87), Expect = 0.002
Identities = 16/38 (42%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
+E+ R + +E+ +E+ER+KE EK +KEK+++++KEK+
Sbjct: 421 REKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKE 458
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
KR RE+ KEKER KE+++ KE++R+KE+EK+
Sbjct: 376 KRKDTREKIKEKERVKEKDR-EKEREREKEREKE 408
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K +++ R +E+ +EKER++E+E+ KEK+R K K++D
Sbjct: 383 KIKEKERVKEKDREKEREREKER-EKEKERGKNKDRD 418
Score = 33.5 bits (75), Expect = 0.038
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 7 RKRGRKRERKKEKERKKEREKGN------KEKKRKKEKEKD 41
+KR + RER+K + R R+K KEK+R KEK+++
Sbjct: 356 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE 396
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K R R R+++K+ K + ++ KEK R+KE+E++
Sbjct: 363 ERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERERE 402
Score = 32.3 bits (72), Expect = 0.084
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 5 KERKRGRK--RERKKEKERKKEREKGNKEKKRKKEKEK 40
K+R+R + ++R K +ER+K R + + KRK +EK
Sbjct: 346 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREK 383
Score = 30.4 bits (67), Expect = 0.32
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 2 EGGK--ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDH 42
E GK ERK GR R + K R + +++ + K + + H
Sbjct: 296 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSH 338
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 5 KERKRGRKRERK---------KEKERKKEREKGNKEKKRKKEKEKDHL 43
+ER+R R R K K + + +K +K+EKE+DH+
Sbjct: 495 RERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHI 542
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRERKKEKERKKERE-KGNKEKKRKKEKEKDHLE 44
+ R++ R+R + K+R K RE + ++ + ++K KD E
Sbjct: 342 RSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTRE 382
Score = 26.6 bits (57), Expect = 4.6
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 7 RKRGRKRERKKEKERKKEREKGNK-----EKKRKKEKEK 40
RKR + + R + R + R+K + KKR K +E+
Sbjct: 326 RKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRER 364
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Query: 12 KRERKKEKER-----KKEREKGNKEKKRKKEKE-KDHLE 44
K+++K+EKER ++ERE+ +K +++ K+ LE
Sbjct: 530 KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLE 568
Score = 25.8 bits (55), Expect = 7.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 5 KERKRGRKRER---KKEKER-----KKEREKGNKEKKRKKE---KEKDH 42
K++KR ++R+ ++E+ER K ++ KEK K KEK+H
Sbjct: 531 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEH 579
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 44.3 bits (103), Expect = 2e-05
Identities = 21/44 (47%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG---NKEKKRKKEKEKDH 42
E +E++R +++ER K K+R KEREK +KEK R++E+EK+H
Sbjct: 282 EREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEH 325
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/40 (50%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E + +++ R++ER++EKER+KE+E+G K K R KE+EKD
Sbjct: 270 EKERVKEKDREKEREREKEREKEKERG-KNKDRDKEREKD 308
Score = 43.5 bits (101), Expect = 4e-05
Identities = 19/38 (50%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
KE+ R ++RER+KE+E++KER K +++K+R+K++EKD
Sbjct: 275 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKD 312
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/41 (48%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E KE+ R R+RE++ EK+R KE+EK +KEK+R+K++ K+
Sbjct: 310 EKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKE 350
Score = 41.6 bits (96), Expect = 1e-04
Identities = 18/40 (45%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E KER + + R++++EK+R+K++EK ++E++R+KE EKD
Sbjct: 290 EKEKERGKNKDRDKEREKDREKDKEK-DREREREKEHEKD 328
Score = 40.8 bits (94), Expect = 2e-04
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNK---EKKRKKEKEKD 41
E GK + R ++RE+ +EK+++K+RE+ + EK R KEKEK+
Sbjct: 294 ERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKE 336
Score = 40.4 bits (93), Expect = 3e-04
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKDHLEWVVTPRNGFQAIRT 58
E +E+ + + RER++EKE +K+R+K KE+ ++KE+EKD + + R + RT
Sbjct: 306 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRT 363
Score = 39.7 bits (91), Expect = 5e-04
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
E K+R + +++E+ KEKER+K+R K EK++K +K + TP + A R R
Sbjct: 324 EHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR-------TPPRSYNASRRSR 375
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/34 (52%), Positives = 29/34 (85%), Gaps = 3/34 (8%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
R++ +++ER KEK+R+KERE +EK+R+KEKE+
Sbjct: 265 REKIKEKERVKEKDREKERE---REKEREKEKER 295
Score = 38.1 bits (87), Expect = 0.002
Identities = 16/38 (42%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
+E+ R + +E+ +E+ER+KE EK +KEK+++++KEK+
Sbjct: 305 REKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKE 342
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
KR RE+ KEKER KE+++ KE++R+KE+EK+
Sbjct: 260 KRKDTREKIKEKERVKEKDR-EKEREREKEREKE 292
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K +++ R +E+ +EKER++E+E+ KEK+R K K++D
Sbjct: 267 KIKEKERVKEKDREKEREREKER-EKEKERGKNKDRD 302
Score = 33.5 bits (75), Expect = 0.038
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 7 RKRGRKRERKKEKERKKEREKGN------KEKKRKKEKEKD 41
+KR + RER+K + R R+K KEK+R KEK+++
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE 280
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K R R R+++K+ K + ++ KEK R+KE+E++
Sbjct: 247 ERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERERE 286
Score = 32.3 bits (72), Expect = 0.084
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 5 KERKRGRK--RERKKEKERKKEREKGNKEKKRKKEKEK 40
K+R+R + ++R K +ER+K R + + KRK +EK
Sbjct: 230 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREK 267
Score = 30.4 bits (67), Expect = 0.32
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 2 EGGK--ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDH 42
E GK ERK GR R + K R + +++ + K + + H
Sbjct: 180 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSH 222
Score = 28.9 bits (63), Expect = 0.93
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 5 KERKRGRKRERK---------KEKERKKEREKGNKEKKRKKEKEKDHL 43
+ER+R R R K K + + +K +K+EKE+DH+
Sbjct: 379 RERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHI 426
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRERKKEKERKKERE-KGNKEKKRKKEKEKDHLE 44
+ R++ R+R + K+R K RE + ++ + ++K KD E
Sbjct: 226 RSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTRE 266
Score = 26.6 bits (57), Expect = 4.6
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 7 RKRGRKRERKKEKERKKEREKGNK-----EKKRKKEKEK 40
RKR + + R + R + R+K + KKR K +E+
Sbjct: 210 RKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRER 248
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Query: 12 KRERKKEKER-----KKEREKGNKEKKRKKEKE-KDHLE 44
K+++K+EKER ++ERE+ +K +++ K+ LE
Sbjct: 414 KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLE 452
Score = 25.8 bits (55), Expect = 7.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 5 KERKRGRKRER---KKEKER-----KKEREKGNKEKKRKKE---KEKDH 42
K++KR ++R+ ++E+ER K ++ KEK K KEK+H
Sbjct: 415 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEH 463
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-------GNKEKKRKKEKEKDHLEWVVTPRNGFQ 54
E +ER+R RKRER++E+ER++ER++ +E+KRK++ E D T R G +
Sbjct: 306 ERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRR 365
Query: 55 AIRTQR 60
+R
Sbjct: 366 QAERER 371
Score = 41.2 bits (95), Expect = 2e-04
Identities = 19/41 (46%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +ER+R R+R RK+E+ER++ERE+ +E +R +EKE++
Sbjct: 302 ERQRERERERERNRKRERERERERERERQRETERDREKERE 342
Score = 41.2 bits (95), Expect = 2e-04
Identities = 17/38 (44%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
+ER+R R R+R+KE+ER+ E+++ G +E ++++E+EKD
Sbjct: 386 EERERDRDRDRQKERERQTEKDRDGQRETEKQREREKD 423
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/41 (43%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E ++R+R R+RER++E+ RK+ERE+ +E++R++E E+D
Sbjct: 296 ETERKRERQRERERERERNRKRERERERERERERQRETERD 336
Score = 39.3 bits (90), Expect = 7e-04
Identities = 16/36 (44%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
ER+ RKRER++EK+R ++R++ ++E++R +EKE++
Sbjct: 72 ERETDRKRERRREKDRHRKRDR-HRERQRDREKERE 106
Score = 39.3 bits (90), Expect = 7e-04
Identities = 17/40 (42%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Query: 5 KERKRGRKRERKKEKERKKEREKG---NKEKKRKKEKEKD 41
++R R R+R+R+KE+ER+ +RE+ KE+ R+KE+E++
Sbjct: 91 RDRHRERQRDREKERERQTDRERDRQREKERNRQKERERE 130
Score = 38.9 bits (89), Expect = 0.001
Identities = 15/37 (40%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++R+ RKRER++E+ER++ER + +E++R++E+E++
Sbjct: 293 RDRETERKRERQRERERERERNR-KRERERERERERE 328
Score = 38.5 bits (88), Expect = 0.001
Identities = 16/40 (40%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E + RKR R RER++++E+++ER+ ++E+ R++EKE++
Sbjct: 84 EKDRHRKRDRHRERQRDREKERERQT-DRERDRQREKERN 122
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 6 ERKRGRKRERKKEKERKKEREK---GNKEKKRKKEKEKD 41
+RKR R+ ER +E ERK+ER++ +E+ RK+E+E++
Sbjct: 284 DRKRQRRTERDRETERKRERQRERERERERNRKRERERE 322
Score = 38.1 bits (87), Expect = 0.002
Identities = 13/40 (32%), Positives = 31/40 (77%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
EG ++ +R R+RER+++++ +ERE+ +++ R ++KE++
Sbjct: 362 EGRRQAERERERERERDRQSAREREERERDRDRDRQKERE 401
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/35 (40%), Positives = 27/35 (77%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
ER+R +RE +++KER++ER++ +R+KE+E+
Sbjct: 247 ERERASERETERDKERERERDRDRDRDRRQKERER 281
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
M+ + R+ GR+ R+ E+ER++ERE+ + + ++E+E+D
Sbjct: 351 MDRERNRQTGREGRRQAERERERERERDRQSAREREERERD 391
Score = 37.7 bits (86), Expect = 0.002
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
R+ R+RER++E++R+ RE+ +E+ R ++++K+ R+G + QR
Sbjct: 365 RQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQR 418
Score = 37.4 bits (85), Expect = 0.003
Identities = 15/41 (36%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +ER+ R+R+R+ E+ R+KERE+ N++++R++E++++
Sbjct: 156 EKERERQTDRERQRQTERNRQKEREREKNRQERRERERQRE 196
Score = 37.4 bits (85), Expect = 0.003
Identities = 16/41 (39%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKERE-KGNKEKKRKKEKEKD 41
E ++RK R+RE++ E+ER ERE + +KE++R++++++D
Sbjct: 231 ERDRQRKTEREREKQAERERASERETERDKERERERDRDRD 271
Score = 37.0 bits (84), Expect = 0.003
Identities = 16/35 (45%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
+ER+R +R R+KE+ER+K R++ +E++R++EKE
Sbjct: 165 RERQRQTERNRQKEREREKNRQE-RRERERQREKE 198
Score = 37.0 bits (84), Expect = 0.003
Identities = 14/38 (36%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
+ +R R+ ERK+E++R++ERE+ N++++R++E+E++
Sbjct: 289 RRTERDRETERKRERQRERERERERNRKRERERERERE 326
Score = 35.8 bits (81), Expect = 0.008
Identities = 13/40 (32%), Positives = 29/40 (72%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E ++++R R++ R++ +ER+++REK NK + R E+ ++
Sbjct: 172 ERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRE 211
Score = 35.8 bits (81), Expect = 0.008
Identities = 15/39 (38%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +E +R R+R+R++E+ER++ R K +E++R++E+E+
Sbjct: 292 ERDRETERKRERQRERERERERNR-KRERERERERERER 329
Score = 35.4 bits (80), Expect = 0.010
Identities = 13/40 (32%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E ++R++ R+R+ +E++R++E+E+ N++K+R++E E++
Sbjct: 96 ERQRDREKERERQTDRERDRQREKER-NRQKERERETERE 134
Score = 35.4 bits (80), Expect = 0.010
Identities = 15/42 (35%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
Query: 5 KERKRGRKRERKKEKERKKEREK-----GNKEKKRKKEKEKD 41
+E++R R++ER++E ER+ ER + G +E++R+++ EK+
Sbjct: 117 REKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKE 158
Score = 35.4 bits (80), Expect = 0.010
Identities = 15/39 (38%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E G+ER+R R+ E + E++R+ +RE+ ++++K ++E+EK
Sbjct: 207 ERGRERERERETETETERKRQTDRER-DRQRKTEREREK 244
Score = 35.4 bits (80), Expect = 0.010
Identities = 15/40 (37%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
Query: 5 KERKRGRKRERKKEKERKKER---EKGNKEKKRKKEKEKD 41
+ER R RK ER++EK+ ++ER + ++K+R++E+++D
Sbjct: 230 RERDRQRKTEREREKQAERERASERETERDKERERERDRD 269
Score = 35.4 bits (80), Expect = 0.010
Identities = 13/35 (37%), Positives = 27/35 (77%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
ER+R R+RER ++ R++E + ++++ R+KE+E+
Sbjct: 368 ERERERERERDRQSAREREERERDRDRDRQKERER 402
Score = 35.0 bits (79), Expect = 0.013
Identities = 10/37 (27%), Positives = 30/37 (81%)
Query: 4 GKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
G +R+R R++ER++ +E+++ + +++++R++EK++
Sbjct: 51 GDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/40 (35%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+G +ER+R R E+++E++ +ER++ E+ R+KE+E++
Sbjct: 144 DGQRERERQRDAEKERERQTDRERQR-QTERNRQKERERE 182
Score = 35.0 bits (79), Expect = 0.013
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K R+ R+RER++EKE K E + ++R++E+E +
Sbjct: 180 EREKNRQERRERERQREKENKTEDRHSERGRERERERETE 219
Score = 35.0 bits (79), Expect = 0.013
Identities = 12/39 (30%), Positives = 29/39 (74%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E ER+ R +ER++E++R ++R++ KE++R+ ++++
Sbjct: 249 ERASERETERDKERERERDRDRDRDRRQKERERQTDRKR 287
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/37 (37%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+ RKR+R+ E++R+ ER+ +E++R++E+E++
Sbjct: 279 RERQTDRKRQRRTERDRETERK---RERQRERERERE 312
Score = 34.7 bits (78), Expect = 0.017
Identities = 15/40 (37%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+ R+R+R++EKER +++E+ +E +R+ E+ +D
Sbjct: 102 EKERERQTDRERDRQREKERNRQKER-ERETEREGERGRD 140
Score = 34.7 bits (78), Expect = 0.017
Identities = 14/37 (37%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGN-KEKKRKKEKEKD 41
+R+R R+R+ ++E+E++ ERE+ + +E +R KE+E++
Sbjct: 229 DRERDRQRKTEREREKQAERERASERETERDKERERE 265
Score = 34.7 bits (78), Expect = 0.017
Identities = 12/37 (32%), Positives = 27/37 (72%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER R+ ER KE+ER+++R++ +++++E++ D
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTD 284
Score = 34.3 bits (77), Expect = 0.022
Identities = 12/31 (38%), Positives = 24/31 (77%)
Query: 11 RKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
R+R R+KE+ER++E+ + +E RK+E+ ++
Sbjct: 54 RERNRQKERERRREKRQTERETDRKRERRRE 84
Score = 34.3 bits (77), Expect = 0.022
Identities = 13/41 (31%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
E ++R+R R+++R ++++R +ER++ KE++R+ ++E+D
Sbjct: 74 ETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERD 114
Score = 34.3 bits (77), Expect = 0.022
Identities = 11/37 (29%), Positives = 28/37 (75%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
KER+R + R+ ++E+ER++E+E +++ ++ +E++
Sbjct: 177 KEREREKNRQERRERERQREKENKTEDRHSERGRERE 213
Score = 34.3 bits (77), Expect = 0.022
Identities = 12/40 (30%), Positives = 29/40 (72%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +E+ R +RER++++E++ + E + E+ R++E+E++
Sbjct: 178 EREREKNRQERRERERQREKENKTEDRHSERGRERERERE 217
Score = 34.3 bits (77), Expect = 0.022
Identities = 16/40 (40%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E ++R R ++RER+ EK+R +RE EK+R++EK+++
Sbjct: 389 ERDRDRDRQKERERQTEKDRDGQRE---TEKQREREKDRE 425
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER R ++RER++EK R+ ERE ++KR++ +EKD
Sbjct: 54 RERNRQKERERRREK-RQTERE---TDRKRERRREKD 86
Score = 33.5 bits (75), Expect = 0.038
Identities = 15/36 (41%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 6 ERKRGRKRERKKEKERKKERE-KGNKEKKRKKEKEK 40
E+ R +RE +K++ER+K+RE + +E+ R++EK+K
Sbjct: 405 EKDRDGQRETEKQREREKDRESERGRERGREREKQK 440
Score = 33.5 bits (75), Expect = 0.038
Identities = 13/36 (36%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+R+ ++RER+K++E ++ RE+G +E++++K +E+D
Sbjct: 411 QRETEKQREREKDRESERGRERG-REREKQKGRERD 445
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 5 KERKRGRKRERKKEKERKKEREK---GNKEKKRKKEKEKD 41
+ +RGR+RER++E E + ER++ ++++RK E+E++
Sbjct: 204 RHSERGRERERERETETETERKRQTDRERDRQRKTERERE 243
Score = 33.1 bits (74), Expect = 0.049
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
ERKR RER ++++ ++EREK +E+ ++E E+D
Sbjct: 223 ERKRQTDRERDRQRKTEREREKQAERERASERETERD 259
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E KER+R R R+R +++ R+KERE+ ++KR++ E+D
Sbjct: 257 ERDKERERERDRDRDRDR-RQKERER-QTDRKRQRRTERD 294
Score = 33.1 bits (74), Expect = 0.049
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K+R+R + RE ++ +ER +EREK K ++R +E++ D
Sbjct: 413 ETEKQREREKDRESERGRERGREREK-QKGRERDRERQTD 451
Score = 32.7 bits (73), Expect = 0.065
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKK 36
E + R+RGR+RE++K +ER +ER+ + +++K
Sbjct: 425 ESERGRERGREREKQKGRERDRERQTDRQAGRQRK 459
Score = 32.3 bits (72), Expect = 0.084
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K+ +R R ER+ E+++++ERE+ + +++KE++
Sbjct: 241 EREKQAERERASERETERDKERERERDRDRDRDRRQKERE 280
Score = 32.3 bits (72), Expect = 0.084
Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 9/45 (20%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNK---------EKKRKKEKEKD 41
ER R ++RERK++++ + +RE+ + E++R++E+E+D
Sbjct: 334 ERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERD 378
Score = 32.3 bits (72), Expect = 0.084
Identities = 13/39 (33%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +ER++ R+ ER +E+ R++E++KG +E+ R+++ ++
Sbjct: 415 EKQREREKDRESERGRERGREREKQKG-RERDRERQTDR 452
Score = 32.0 bits (71), Expect = 0.11
Identities = 13/45 (28%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-----GNKEKKRKKEKEKD 41
E ++R++ R+R+RK++ E +ER + G ++ +R++E+E++
Sbjct: 332 ETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERE 376
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/59 (25%), Positives = 33/59 (55%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRNGFQAIRTQR 60
E ++ +R R+R+R+KE + + + +E++R++E E + T R + +T+R
Sbjct: 182 EKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTER 240
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTP 49
E +E +RGR+R R++EK++ +ER++ + ++ + K +V P
Sbjct: 421 EKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPP 468
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/46 (34%), Positives = 32/46 (69%), Gaps = 6/46 (13%)
Query: 2 EGGKERKRGRKRERK-KEKERKKEREK-----GNKEKKRKKEKEKD 41
E +ER R R R+R+ KE+ER+ +R++ ++E +RK+E++++
Sbjct: 261 ERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRE 306
Score = 30.8 bits (68), Expect = 0.25
Identities = 13/39 (33%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E +E +RGR R+ ++ER+++R+ KE++R+ ++E+
Sbjct: 130 ETEREGERGRDRQTDGQRERERQRD-AEKERERQTDRER 167
Score = 30.8 bits (68), Expect = 0.25
Identities = 9/39 (23%), Positives = 29/39 (74%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E + +R +R++++E+ER ++R++ ++K+R+++ ++
Sbjct: 247 ERERASERETERDKERERERDRDRDRDRRQKERERQTDR 285
Score = 29.3 bits (64), Expect = 0.71
Identities = 10/35 (28%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
R++ R+R+ ++++R+ ER++ E+KR++++E++
Sbjct: 275 RQKERERQTDRKRQRRTERDR-ETERKRERQRERE 308
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+ R+ ER ++++ +RE +E++R EKE++
Sbjct: 127 RERETEREGERGRDRQTDGQRE---RERQRDAEKERE 160
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 43.5 bits (101), Expect = 4e-05
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-KRKKEKEKDHLE 44
KER++ K +K+EKER+KER+K KE+ K++KE+EK E
Sbjct: 726 KERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKE 766
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/40 (35%), Positives = 31/40 (77%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E K+ K +K+E+++EKER+K+ ++ K++K ++++EK+
Sbjct: 727 ERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKE 766
Score = 36.6 bits (83), Expect = 0.004
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-KRKKEKEKDHLE 44
KE ++ K +K+EKER+K+ ++ KE+ K++KE+EK E
Sbjct: 719 KETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKE 759
Score = 36.2 bits (82), Expect = 0.006
Identities = 13/34 (38%), Positives = 29/34 (85%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEK 38
KER++ R+++ K+ ++++KEREK KE++++++K
Sbjct: 740 KEREKERQKQEKEREKQEKEREKQEKERQKQEKK 773
Score = 35.8 bits (81), Expect = 0.008
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKER-KKEREKGNKEKKRKKEKEK 40
E K+ K K +K+EKER K+E+E+ +EK+R+K+++K
Sbjct: 734 ERQKQEKEREKERQKQEKEREKQEKEREKQEKERQKQEKK 773
Score = 33.5 bits (75), Expect = 0.038
Identities = 18/38 (47%), Positives = 33/38 (86%), Gaps = 3/38 (7%)
Query: 5 KERKRGRKRERKKEKER-KKEREKGNKEK-KRKKEKEK 40
KER++ +++ER+KE+++ +KEREK KE+ K++KE++K
Sbjct: 733 KERQK-QEKEREKERQKQEKEREKQEKEREKQEKERQK 769
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 2 EGGKERKRGRKRERKKEKER-KKEREKGNKEKKRKKEK 38
E KER++ K K+EKER K+E+E+ +EKK + K
Sbjct: 741 EREKERQKQEKEREKQEKEREKQEKERQKQEKKAQGRK 778
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 5 KERKRGRKRERKKEKERKKEREK--GNKEKKRKK 36
KER++ K K+EKER+K+ +K G K R+K
Sbjct: 751 KEREKQEKEREKQEKERQKQEKKAQGRKLSLRRK 784
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 43.5 bits (101), Expect = 4e-05
Identities = 19/37 (51%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+R R+RER+ ++ER+KERE+ +EK+R++EKE++
Sbjct: 237 REREREREREREADREREKERER-EREKEREQEKERE 272
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/41 (48%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +ER+R R+ +R++EKER++EREK +EK+R++EKE++
Sbjct: 238 EREREREREREADREREKEREREREKEREQEKEREREKERE 278
Score = 43.1 bits (100), Expect = 5e-05
Identities = 19/40 (47%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+ R+RE+++E+ER+KERE+ KE++R+KE+E++
Sbjct: 242 EREREREADREREKEREREREKEREQ-EKEREREKERERE 280
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/40 (45%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER++ R+RER+KE+E++KERE+ KE++R+ E++++
Sbjct: 248 EADREREKEREREREKEREQEKERER-EKERERELERQRE 286
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/42 (40%), Positives = 33/42 (78%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHL 43
E +ER+R ++RE++KE+ER+KERE+ + ++ ++ +EK+ L
Sbjct: 254 EKEREREREKEREQEKEREREKERERELERQREQRAREKELL 295
Score = 40.0 bits (92), Expect = 4e-04
Identities = 17/37 (45%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+E +R R+RER++E+ER+ +RE+ KE++R++EKE++
Sbjct: 231 EELRREREREREREREREADRER-EKEREREREKERE 266
Score = 39.7 bits (91), Expect = 5e-04
Identities = 17/40 (42%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RE +E+E+++ERE+ KE++++KE+E++
Sbjct: 236 EREREREREREREADREREKERERER-EKEREQEKERERE 274
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/41 (43%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
M+ R+R R+RER++E+E +EREK +E++R+KE+E++
Sbjct: 229 MDEELRREREREREREREREADREREK-EREREREKEREQE 268
Score = 38.1 bits (87), Expect = 0.002
Identities = 14/40 (35%), Positives = 33/40 (82%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E KER+R R++ER++EKER++E+E+ + +++++++ ++
Sbjct: 252 EREKEREREREKEREQEKEREREKERERELERQREQRARE 291
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHL 43
E +E++R R++ER++E ER++E+ KE K E L
Sbjct: 264 EREQEKEREREKERERELERQREQRAREKELLAAKALEPSFL 305
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 43.5 bits (101), Expect = 4e-05
Identities = 19/37 (51%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+R R+RER+ ++ER+KERE+ +EK+R++EKE++
Sbjct: 341 REREREREREREADREREKERER-EREKEREQEKERE 376
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/41 (48%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +ER+R R+ +R++EKER++EREK +EK+R++EKE++
Sbjct: 342 EREREREREREADREREKEREREREKEREQEKEREREKERE 382
Score = 43.1 bits (100), Expect = 5e-05
Identities = 19/40 (47%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+ R+RE+++E+ER+KERE+ KE++R+KE+E++
Sbjct: 346 EREREREADREREKEREREREKEREQ-EKEREREKERERE 384
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/40 (45%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER++ R+RER+KE+E++KERE+ KE++R+ E++++
Sbjct: 352 EADREREKEREREREKEREQEKERER-EKERERELERQRE 390
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/42 (40%), Positives = 33/42 (78%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHL 43
E +ER+R ++RE++KE+ER+KERE+ + ++ ++ +EK+ L
Sbjct: 358 EKEREREREKEREQEKEREREKERERELERQREQRAREKELL 399
Score = 40.0 bits (92), Expect = 4e-04
Identities = 17/37 (45%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+E +R R+RER++E+ER+ +RE+ KE++R++EKE++
Sbjct: 335 EELRREREREREREREREADRER-EKEREREREKERE 370
Score = 39.7 bits (91), Expect = 5e-04
Identities = 17/40 (42%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RE +E+E+++ERE+ KE++++KE+E++
Sbjct: 340 EREREREREREREADREREKERERER-EKEREQEKERERE 378
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/41 (43%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
M+ R+R R+RER++E+E +EREK +E++R+KE+E++
Sbjct: 333 MDEELRREREREREREREREADREREK-EREREREKEREQE 372
Score = 38.1 bits (87), Expect = 0.002
Identities = 14/40 (35%), Positives = 33/40 (82%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E KER+R R++ER++EKER++E+E+ + +++++++ ++
Sbjct: 356 EREKEREREREKEREQEKEREREKERERELERQREQRARE 395
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHL 43
E +E++R R++ER++E ER++E+ KE K E L
Sbjct: 368 EREQEKEREREKERERELERQREQRAREKELLAAKALEPSFL 409
>gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo
sapiens]
Length = 795
Score = 43.5 bits (101), Expect = 4e-05
Identities = 19/38 (50%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 4 GKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
GK+R R R RE + K+R +ER++G++E++R+KEKEK+
Sbjct: 24 GKDRDRDRDRE-DRSKDRDRERDRGDREREREKEKEKE 60
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 43.1 bits (100), Expect = 5e-05
Identities = 16/36 (44%), Positives = 32/36 (88%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+E K+ +++E+KK+K++KK+++K K+KK+KK+K+K
Sbjct: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKK 137
Score = 42.7 bits (99), Expect = 6e-05
Identities = 16/39 (41%), Positives = 34/39 (87%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E KE+++ +K+++KK+K++KK+++K K+KK+KK+K++
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKR 141
Score = 42.0 bits (97), Expect = 1e-04
Identities = 15/39 (38%), Positives = 34/39 (87%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E KE+K+ +K+++KK+K++KK+++K K+KK+K+++++
Sbjct: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKR 145
Score = 42.0 bits (97), Expect = 1e-04
Identities = 15/36 (41%), Positives = 32/36 (88%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K+RK++R++ K KK++K+K+K
Sbjct: 125 KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Score = 41.6 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 34/39 (87%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E K++K+ +K+++KK+K++KK+++K K+KKRK+++++
Sbjct: 109 EKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKR 147
Score = 41.2 bits (95), Expect = 2e-04
Identities = 15/36 (41%), Positives = 30/36 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K ++K + K ++KKRKK+K+K
Sbjct: 126 KKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/33 (48%), Positives = 29/33 (87%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+R K+E++KEK++KK+++K K+KK+KK+K+K
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKK 133
Score = 40.4 bits (93), Expect = 3e-04
Identities = 15/40 (37%), Positives = 33/40 (82%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+ G +R+ +++E++K+K++KK+++K K+KK+KK+K+K
Sbjct: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK 135
Score = 40.4 bits (93), Expect = 3e-04
Identities = 16/39 (41%), Positives = 31/39 (79%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E ++ K +K+++KK+K++KK+++K K+KK+KK+K K
Sbjct: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRK 142
Score = 40.4 bits (93), Expect = 3e-04
Identities = 14/39 (35%), Positives = 34/39 (87%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E K++K+ +K+++KK+K++KK+++K K++KRK+++++
Sbjct: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
Score = 40.4 bits (93), Expect = 3e-04
Identities = 14/36 (38%), Positives = 31/36 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK+R++ K K+++K+K K
Sbjct: 121 KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
Score = 40.4 bits (93), Expect = 3e-04
Identities = 14/36 (38%), Positives = 31/36 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK + K +++KRKK+++K
Sbjct: 122 KKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
Score = 40.4 bits (93), Expect = 3e-04
Identities = 14/36 (38%), Positives = 31/36 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++K++R++ K K++KK K+K
Sbjct: 123 KKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
Score = 40.0 bits (92), Expect = 4e-04
Identities = 14/36 (38%), Positives = 30/36 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK+++K K K+++K K K
Sbjct: 115 KKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
Score = 40.0 bits (92), Expect = 4e-04
Identities = 14/36 (38%), Positives = 30/36 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK+++K K K+++K K K
Sbjct: 117 KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
Score = 40.0 bits (92), Expect = 4e-04
Identities = 13/36 (36%), Positives = 33/36 (91%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK+++K +++KRK++++K
Sbjct: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
Score = 39.7 bits (91), Expect = 5e-04
Identities = 13/36 (36%), Positives = 32/36 (88%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK++ K +++KRK++K++
Sbjct: 120 KKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
Score = 39.3 bits (90), Expect = 7e-04
Identities = 13/36 (36%), Positives = 31/36 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK++++ K K+++K K+K
Sbjct: 119 KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
Score = 38.9 bits (89), Expect = 0.001
Identities = 12/36 (33%), Positives = 33/36 (91%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K++KK+++K +++KRK+++++
Sbjct: 116 KKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR 151
Score = 38.1 bits (87), Expect = 0.002
Identities = 12/36 (33%), Positives = 31/36 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K++K+ +K+++KK+K+++K + K +++K+K++K+K
Sbjct: 124 KKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/35 (40%), Positives = 29/35 (82%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
K++K+ +K++RK++++RK++R+K K+KK+K E
Sbjct: 131 KKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
Score = 36.6 bits (83), Expect = 0.004
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDH 42
K++K+ +KR+RK++++RK+++++ K+KK E K H
Sbjct: 133 KKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKIH 170
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 42.7 bits (99), Expect = 6e-05
Identities = 19/42 (45%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Query: 5 KERKRGRKRERKKEKERKKER--EKGNKEKKRKKEKEKDHLE 44
+ER+R R+RERK+E +R+++R E+ ++K+RKKE++K+ E
Sbjct: 140 RERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKE 181
Score = 42.4 bits (98), Expect = 8e-05
Identities = 16/45 (35%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKDHLEW 45
+GG+ER + +RER +E+ER+++RE+ ++++RK+E +++ W
Sbjct: 117 KGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRW 161
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRK 35
+ERK+ RK+ERKKE++ KK+ EK ++KKRK
Sbjct: 165 EERKKERKKERKKERKEKKKEEKRREDKKRK 195
Score = 41.6 bits (96), Expect = 1e-04
Identities = 20/40 (50%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R +RE +K KERKKER+K KEKK+++++ +D
Sbjct: 153 ETDRERQRWAEREERK-KERKKERKKERKEKKKEEKRRED 191
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
E ++R+R RKRE +E++R ERE+ KE+K++++KE+
Sbjct: 141 ERERQRQRERKRETDRERQRWAEREERKKERKKERKKER 179
Score = 39.3 bits (90), Expect = 7e-04
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKER-EKGNKEKKRKKEKEKD 41
+ER + R RERK+E +R +ER KG +E+ ++ E+E+D
Sbjct: 94 RERDKDRDRERKRETDRNRERNRKGGRERDKQTERERD 131
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E KER R R+RER+ E+E +++RE+ +E+KR+ ++E+D
Sbjct: 57 ERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERD 97
Score = 38.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 33/41 (80%), Gaps = 4/41 (9%)
Query: 5 KERKRGRKRERKKEKERKKE----REKGNKEKKRKKEKEKD 41
+ER+R R+RER++++ERK+E R++ + ++RKKE++K+
Sbjct: 134 RERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKE 174
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
+ERKR RER K+++R+++RE N+E+ RK +E+D
Sbjct: 86 RERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERD 123
Score = 36.6 bits (83), Expect = 0.004
Identities = 15/37 (40%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ R+R R RER ++ +R+KERE+ KE+ R++++E++
Sbjct: 36 RHRQRDRHRERDRQTDREKERER-QKERDRQRQRERE 71
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/41 (34%), Positives = 28/41 (68%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
ME +ERKR R ++ E+ER ++RE+ N+ ++ + +++D
Sbjct: 1 MERQRERKRETDRGKETERERDRQRERENQTERENRHRQRD 41
Score = 35.4 bits (80), Expect = 0.010
Identities = 14/37 (37%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ R+R R+ +R+KE+ER+KER++ ++++R+ E+E +
Sbjct: 42 RHRERDRQTDREKERERQKERDR-QRQRERETERETE 77
Score = 34.3 bits (77), Expect = 0.022
Identities = 14/40 (35%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +E +R R+R+R++E++R+ +RE+ +K++ R++++E D
Sbjct: 71 ETERETERQRERQRQRERKRQTDRER-DKDRDRERKRETD 109
Score = 34.3 bits (77), Expect = 0.022
Identities = 12/40 (30%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E ++R+R R+RERK++ +R++++++ ++E+KR+ ++ ++
Sbjct: 75 ETERQRERQRQRERKRQTDRERDKDR-DRERKRETDRNRE 113
Score = 33.9 bits (76), Expect = 0.029
Identities = 12/37 (32%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++R R R+R+R+ ++E+++ER+K ++++R++E+E +
Sbjct: 38 RQRDRHRERDRQTDREKERERQK-ERDRQRQRERETE 73
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 2 EGGKERKRGRK--RERKKEKERKKEREKGNKEKKRKKEKEK 40
E + R+R RK RER K+ ER+++RE +E++R++E+E+
Sbjct: 107 ETDRNRERNRKGGRERDKQTERERDRE---RERQRQRERER 144
Score = 33.1 bits (74), Expect = 0.049
Identities = 13/40 (32%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEK 40
E ++ R ++RER+KE++R+++RE+ +E +R++E+++
Sbjct: 45 ERDRQTDREKERERQKERDRQRQRERETERETERQRERQR 84
Score = 32.7 bits (73), Expect = 0.065
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 4 GKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
GKE +R R R+R++E + ++E +++ R+++++ D
Sbjct: 14 GKETERERDRQRERENQTERENRHRQRDRHRERDRQTD 51
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 8/48 (16%)
Query: 2 EGGKERKRGRKRE-------RKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +ER R R+RE R ++++R +ER++ ++EK+R+++KE+D
Sbjct: 16 ETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERD 63
Score = 32.7 bits (73), Expect = 0.065
Identities = 12/37 (32%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
++R R R R+ +EKER++++E+ +++++R++E E++
Sbjct: 40 RDRHRERDRQTDREKERERQKER-DRQRQRERETERE 75
Score = 32.7 bits (73), Expect = 0.065
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTPRN 51
+ER+ R+ ER++E++R++ER+ ++ R+++K++D T RN
Sbjct: 68 RERETERETERQRERQRQRERK---RQTDRERDKDRDRERKRETDRN 111
Score = 32.3 bits (72), Expect = 0.084
Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 2 EGGKERKRGRKRE--RKKEKERKKEREKGNKEKKRKKEKEKD 41
E K+R R RKRE R +E+ RK RE+ +K+ +R++++E++
Sbjct: 95 ERDKDRDRERKRETDRNRERNRKGGRER-DKQTERERDRERE 135
Score = 31.6 bits (70), Expect = 0.14
Identities = 13/36 (36%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+ R R+R+R +E++R+ +REK E++R+KE+++
Sbjct: 32 ERENRHRQRDRHRERDRQTDREK---ERERQKERDR 64
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/41 (34%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEKD 41
E +E R R+R RK +ER K+ E+ ++E++R++++E++
Sbjct: 103 ERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERE 143
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/36 (27%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+ER R RE+++E++++++R++ +E++ ++E E+
Sbjct: 44 RERDRQTDREKERERQKERDRQR-QRERETERETER 78
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 42.7 bits (99), Expect = 6e-05
Identities = 19/41 (46%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 2 EGGKERKR-GRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RER++E+ER +ERE+ +E++R++E E+D
Sbjct: 403 ERERERERENRQRERERERERDRERERRQREREREREHERD 443
Score = 41.6 bits (96), Expect = 1e-04
Identities = 16/39 (41%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
Query: 5 KERKRGRKRE-RKKEKERKKEREKGNKEKKRKKEKEKDH 42
+ER+R R+RE R++E+ER++ER++ + ++R++E+E++H
Sbjct: 402 RERERERERENRQRERERERERDRERERRQREREREREH 440
Score = 39.7 bits (91), Expect = 5e-04
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEW 45
++R+R R+RER +E+ER++ + +E +R KE+++ EW
Sbjct: 413 RQRERERERERDRERERRQREREREREHERDKERQRRKEEW 453
Score = 39.7 bits (91), Expect = 5e-04
Identities = 13/38 (34%), Positives = 30/38 (78%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDH 42
++R+R R+RE +++KER++ +E+ +E+ ++ EK++ H
Sbjct: 430 RQREREREREHERDKERQRRKEEWERERAKRDEKDRQH 467
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/41 (41%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERK-KEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+R R+RER+ +E+ER++E E+ + ++RK+E E++
Sbjct: 416 ERERERERDRERERRQREREREREHERDKERQRRKEEWERE 456
Score = 37.7 bits (86), Expect = 0.002
Identities = 16/41 (39%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 2 EGGKERK-RGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +ER+ R R+RER++E++R++ER + +E++R+ E++K+
Sbjct: 405 ERERERENRQRERERERERDRERERRQREREREREHERDKE 445
Score = 37.0 bits (84), Expect = 0.003
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ R+R R+RER+ E++++++R K E++R K EKD
Sbjct: 428 ERRQREREREREHERDKERQRRKEEWERERAKRDEKD 464
Score = 35.8 bits (81), Expect = 0.008
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 11/48 (22%)
Query: 5 KERKRGRKRERKKEKERKKE---REKGNKEKK--------RKKEKEKD 41
+ER+R R+ ER KE++R+KE RE+ +++K R+KE+EK+
Sbjct: 432 REREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKE 479
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 2 EGGKERKRGRKRERKKE---KERKKEREKGNKEKKRKKEKEKDHLEWVVTPRN 51
E +E +R ++R+R+KE +ER K EK + + R +EKE++ + PR+
Sbjct: 435 EREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKEKGKPKPRS 487
Score = 30.4 bits (67), Expect = 0.32
Identities = 11/32 (34%), Positives = 23/32 (71%)
Query: 13 RERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
RER++E+ER+ + + +E++R +E+E+ E
Sbjct: 402 RERERERERENRQRERERERERDRERERRQRE 433
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 5 KERK-RGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K+R+ R R RE+++EKE+ K + + + R+ E K
Sbjct: 463 KDRQHRDRDREKEREKEKGKPKPRSPQPPSRQAEPPK 499
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+EGG + K+E+KK +RKK++EK K+KK KK KD
Sbjct: 1352 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKD 1392
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-------KRKKEKEK 40
KE+K+ KR++ KEK+ KK++ K K K+KK+K+K
Sbjct: 1364 KEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1406
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+EGG + K+E+KK +RKK++EK K+KK KK KD
Sbjct: 1391 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKD 1431
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-------KRKKEKEK 40
KE+K+ KR++ KEK+ KK++ K K K+KK+K+K
Sbjct: 1403 KEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1445
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+EGG + K+E+KK +RKK++EK K+KK KK KD
Sbjct: 1428 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKD 1468
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-------KRKKEKEK 40
KE+K+ KR++ KEK+ KK++ K K K+KK+K+K
Sbjct: 1440 KEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1482
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
sapiens]
Length = 1411
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+EGG + K+E+KK +RKK++EK K+KK KK KD
Sbjct: 1351 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKD 1391
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-------KRKKEKEK 40
KE+K+ KR++ KEK+ KK++ K K K+KK+K+K
Sbjct: 1363 KEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1405
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1 MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+EGG + K+E+KK +RKK++EK K+KK KK KD
Sbjct: 1390 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKD 1430
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEK-------KRKKEKEK 40
KE+K+ KR++ KEK+ KK++ K K K+KK+K+K
Sbjct: 1402 KEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1444
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 42.0 bits (97), Expect = 1e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K+ K+ +++ER KEK+++KE++K K KK+K KEK+
Sbjct: 846 KKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKE 882
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 5 KERKRGRKRERK-KEKERKKEREKGNKEKKRKKEKEKDH 42
K+ K+ +K+E+K KEKER KE++K ++KK K K+K H
Sbjct: 839 KKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKH 877
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/39 (41%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Query: 6 ERKRGRKRERKKEKERKKEREKGN----KEKKRKKEKEK 40
++K + +E++++KE+KKE+EK K+KK +KEKE+
Sbjct: 845 KKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEE 883
Score = 33.9 bits (76), Expect = 0.029
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRK 35
KE+K+ K ++KK ++ K+ER KG K+ K++
Sbjct: 864 KEKKKSPKPKKKKHRKEKEERTKGKKKSKKQ 894
Score = 32.7 bits (73), Expect = 0.065
Identities = 13/36 (36%), Positives = 26/36 (72%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
KER + +K+E++K+K K +++K KEK+ + + +K
Sbjct: 854 KERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKK 889
Score = 32.0 bits (71), Expect = 0.11
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 14 ERKKEKERKKEREKGNKEKKRKKEKEKD 41
E+K +K +KKE++ KE+ ++K+KEK+
Sbjct: 838 EKKSKKPKKKEKKHKEKERDKEKKKEKE 865
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 11/45 (24%)
Query: 5 KERKRGRKRERKKEKERK-----------KEREKGNKEKKRKKEK 38
K +++ R +E+KKEKE+K KE+E+ K KK+ K++
Sbjct: 850 KHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQ 894
Score = 30.0 bits (66), Expect = 0.42
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 17 KEKERKKEREKGNKEKKRKKEKEKD 41
K +E ++ R+K K+K+RKK KEK+
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKE 750
Score = 30.0 bits (66), Expect = 0.42
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKE 37
E KE+++ + + KK+K RK++ E+ +KK KK+
Sbjct: 859 EKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQ 894
Score = 29.6 bits (65), Expect = 0.55
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+ER+ +K E+ K ++++KE+EK K + E D
Sbjct: 729 EERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESD 765
Score = 29.3 bits (64), Expect = 0.71
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKR 34
E +R +++ +K+K RKK +EK K K+R
Sbjct: 728 EEERRHRQKLEKDKRRKKRKEKEKKGKRR 756
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/38 (26%), Positives = 27/38 (71%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
E +++++ +++E+KK + KK++ + KE++ K +K+
Sbjct: 853 EKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKK 890
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKE 37
E K K +K+ RK+++ER K ++K K+ +E
Sbjct: 865 EKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSEE 900
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 41.2 bits (95), Expect = 2e-04
Identities = 13/36 (36%), Positives = 31/36 (86%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
+E++R RER +E+ER++ER++G++++ R++++E+
Sbjct: 1277 REKRREHSRERDRERERERERDRGDRDRDRERDRER 1312
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/41 (39%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKG-NKEKKRKKEKEKD 41
E KER++ +RER ++ ER+K RE ++++R++E+E+D
Sbjct: 1258 EEQKEREKEAERERNRQLEREKRREHSRERDRERERERERD 1298
Score = 34.7 bits (78), Expect = 0.017
Identities = 11/36 (30%), Positives = 28/36 (77%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
ER++ R+ R++++ER++ERE+ ++ R +E++++
Sbjct: 1276 EREKRREHSRERDRERERERERDRGDRDRDRERDRE 1311
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 2 EGGKERKRGRK---RERKKEKERKKEREKG---NKEKKRKKEKEKD 41
E KER++ RK E +KE+E++ ERE+ +EK+R+ +E+D
Sbjct: 1243 ERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERD 1288
Score = 33.9 bits (76), Expect = 0.029
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E ++ +R ++RE +E++R++ERE+ R +++E+D
Sbjct: 1270 ERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERD 1309
Score = 33.5 bits (75), Expect = 0.038
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREK-GNKEKKRKKEKEK 40
E + K KR +++E+E +KEREK +E+ R+ E+EK
Sbjct: 1240 ERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREK 1279
Score = 33.1 bits (74), Expect = 0.049
Identities = 11/35 (31%), Positives = 26/35 (74%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
+K + ER KE+E++++ ++ ++K+R+KE E++
Sbjct: 1236 QKEAERAERAKEREKRRKEQEEEEQKEREKEAERE 1270
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
E +E R R RER++E+ER + ++E+ R++ +E+D
Sbjct: 1278 EKRREHSRERDRERERERERDRGDRDRDRERDRERGRERD 1317
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
K R+ R R R +++ R+KER K ++K KKEK ++
Sbjct: 1169 KVREGPRSRSRSRDR-RRKERAKSKEKKSEKKEKAQE 1204
Score = 30.8 bits (68), Expect = 0.25
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
EG + R R R R R+KE+ + KE++ KEK +++ K
Sbjct: 1172 EGPRSRSRSRDR-RRKERAKSKEKKSEKKEKAQEEPPAK 1209
Score = 30.4 bits (67), Expect = 0.32
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 2 EGGKERKRGRKRERK-----KEKERKKEREKGNKEKKRKKEK 38
E +ER R R+RER+ ++++R+++RE+G + +R ++
Sbjct: 1282 EHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDTKR 1323
Score = 28.9 bits (63), Expect = 0.93
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
ER+ R + R+ + R + R++ KE+ + KEK+ + E
Sbjct: 1162 EREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKE 1200
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/34 (29%), Positives = 24/34 (70%)
Query: 7 RKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
R+R R+RER++E++R ++++R +E+++
Sbjct: 1285 RERDRERERERERDRGDRDRDRERDRERGRERDR 1318
Score = 26.2 bits (56), Expect = 6.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKR 34
++R+RGR+R+R+ K + R + + R
Sbjct: 1308 RDRERGRERDRRDTKRHSRSRSRSTPVRDR 1337
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 41.2 bits (95), Expect = 2e-04
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 8 KRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
K K++ KKEK++KKE+EK KEK+R+KEK +
Sbjct: 697 KEKEKKKDKKEKKKKKEKEKEKKEKEREKEKRE 729
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/31 (58%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Query: 12 KRERKKEKERKKEREKGNKEK-KRKKEKEKD 41
++E++K K++KK+REKG K+K KR+KEK KD
Sbjct: 610 RKEKEKHKDKKKDREKGKKDKDKREKEKVKD 640
Score = 40.4 bits (93), Expect = 3e-04
Identities = 21/38 (55%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
Query: 5 KERKRGRKRERKKEKERK-KEREKGNKEK-KRKKEKEK 40
K+ K+ +K++++KEKE+K KEREK +E+ KR+KEKEK
Sbjct: 702 KKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEK 739
Score = 39.3 bits (90), Expect = 7e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 16 KKEKERKKEREKGNKEKKRKKEKEKDHLE 44
+KEK ++KE++K KEKK+KKEKEK+ E
Sbjct: 692 EKEKVKEKEKKKDKKEKKKKKEKEKEKKE 720
Score = 38.5 bits (88), Expect = 0.001
Identities = 15/45 (33%), Positives = 32/45 (71%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTP 49
K+ K+ +K + K++KE+++E+EK +EK+ K++++ H + V P
Sbjct: 705 KKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHEKIKVEP 749
Score = 38.1 bits (87), Expect = 0.002
Identities = 16/41 (39%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 5 KERKRGRKRERKKEK-ERKKEREKGNKEKKRKKEKEKDHLE 44
+E+++ +++E+KK+K E+KK++EK ++K++++EKEK E
Sbjct: 691 EEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKRERE 731
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 5 KERKRGRKRERKKEKERKKEREKG-----NKEKKRKKEKEKD 41
K +K + + +KKEK+R +EREK +KEK + KEKEKD
Sbjct: 524 KLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKD 565
Score = 35.8 bits (81), Expect = 0.008
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEW 45
KE++R R+RE+ K K++ KE++K +++K K+ + W
Sbjct: 536 KEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPW 576
Score = 34.3 bits (77), Expect = 0.022
Identities = 15/35 (42%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKE 39
K++++ R RER+K+K + K +EK +K K+++K+KE
Sbjct: 534 KKKEKQRDREREKDKNKDKSKEK-DKVKEKEKDKE 567
Score = 31.2 bits (69), Expect = 0.19
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 6 ERKRGRKRERK---KEKERKKEREKGNKEKKRKKEKEKDHLE 44
E K+ K+E K K+KE++++RE+ K+K + K KEKD ++
Sbjct: 520 EVKKKLKKELKTKMKKKEKQRDRER-EKDKNKDKSKEKDKVK 560
Score = 31.2 bits (69), Expect = 0.19
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLE 44
+ER++ + +++ KEK++ KE+EK + + K K+ L+
Sbjct: 542 REREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLK 581
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKDHLEWVVTP 49
KE+ + +K++R+K K+ K +REK + K +++K K +V P
Sbjct: 613 KEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLP 657
Score = 29.3 bits (64), Expect = 0.71
Identities = 12/39 (30%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 2 EGGKERKRGRKRERKKEKER-KKEREKGNKEKKRKKEKE 39
+G +++ + +++KK++E+ KK+++K KEK + K +E
Sbjct: 606 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGRE 644
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 2 EGGKERKRGRKRERKKEKE-RKKEREKGNKEK 32
E KE+K + + K+E+E R+KE+EK EK
Sbjct: 713 EKEKEKKEKEREKEKREREKREKEKEKHKHEK 744
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 2 EGGKERKRGRKRERKKEKERKKE--REKGNKEKKRKKEKEKD 41
E K + + +++++ KEKE+ KE RE K+ KE+E D
Sbjct: 545 EKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEAD 586
>gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]
Length = 524
Score = 41.2 bits (95), Expect = 2e-04
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEKD 41
KERKR R RERKK K R+++R + +KE++R + + +D
Sbjct: 53 KERKRSRDRERKKSKSRERKRSR-SKERRRSRSRSRD 88
Score = 36.6 bits (83), Expect = 0.004
Identities = 14/35 (40%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 6 ERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
ERKR + +ERK+ ++R++++ K ++E+KR + KE+
Sbjct: 46 ERKRSKSKERKRSRDRERKKSK-SRERKRSRSKER 79
Score = 32.0 bits (71), Expect = 0.11
Identities = 12/38 (31%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 3 GGKERKRGRKRERKKEKERKKEREKGNKEKKRKKEKEK 40
G +ER + RK+ + + + +++R K +KE+KR +++E+
Sbjct: 27 GHEERSKKRKKSKSRSRSHERKRSK-SKERKRSRDRER 63
Score = 29.3 bits (64), Expect = 0.71
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNK---EKKRKKEKEKD 41
+ +KR + + R + ERK+ + K K +++RKK K ++
Sbjct: 31 RSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRE 70
Score = 28.9 bits (63), Expect = 0.93
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 5 KERKRGRKRERKKEKERKKEREKGNKEKKR 34
+ERK+ + RERK+ + +++ R + +R
Sbjct: 61 RERKKSKSRERKRSRSKERRRSRSRSRDRR 90
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 2 EGGKERKRGRKRERKKEKERKKEREKGNKEKKR 34
E K + R RKR R KE+ R + R + + + R
Sbjct: 62 ERKKSKSRERKRSRSKERRRSRSRSRDRRFRGR 94
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.127 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,917,002
Number of Sequences: 37866
Number of extensions: 147683
Number of successful extensions: 15620
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 3902
Number of HSP's gapped (non-prelim): 8040
length of query: 60
length of database: 18,247,518
effective HSP length: 33
effective length of query: 27
effective length of database: 16,997,940
effective search space: 458944380
effective search space used: 458944380
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.