Search of human proteins with 239749610

Search of human proteins with 239749610

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749610 PREDICTED: hypothetical protein XP_002347102 [Homo
sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755097 PREDICTED: hypothetical protein XP_002346214 [Homo ...   441   e-124
gi|239749610 PREDICTED: hypothetical protein XP_002347102 [Homo ...   441   e-124
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            39   0.003
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  33   0.22 
gi|188536004 zinc finger protein 469 [Homo sapiens]                    32   0.29 
gi|253795481 plexin B3 isoform 2 [Homo sapiens]                        31   0.85 
gi|29336063 plexin B3 isoform 1 [Homo sapiens]                         31   0.85 
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    31   0.85 
gi|153792230 hypothetical protein LOC57670 [Homo sapiens]              30   1.1  
gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens]                      30   1.9  
gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]           30   1.9  
gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens]           30   1.9  
gi|7705971 leucine zipper protein 4 [Homo sapiens]                     29   2.5  
gi|4503433 E2F transcription factor 3 [Homo sapiens]                   29   3.2  
gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens]              29   3.2  
gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens]              29   3.2  
gi|45827729 scribble isoform b [Homo sapiens]                          29   3.2  
gi|45827731 scribble isoform a [Homo sapiens]                          29   3.2  
gi|239756028 PREDICTED: hypothetical protein [Homo sapiens]            28   4.2  
gi|171543895 ataxin 2 [Homo sapiens]                                   28   4.2  
gi|56786157 activating transcription factor 6 [Homo sapiens]           28   5.5  
gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo...    28   5.5  
gi|93277088 mediator of RNA polymerase II transcription, subunit...    28   5.5  
gi|56606114 trichohyalin-like 1 [Homo sapiens]                         28   5.5  
gi|154350246 hypothetical protein LOC84923 isoform 1 [Homo sapiens]    28   5.5  
gi|154350224 hypothetical protein LOC84923 isoform 2 [Homo sapiens]    28   5.5  
gi|226246554 hypothetical protein LOC643677 [Homo sapiens]             28   7.2  
gi|4505349 necdin [Homo sapiens]                                       28   7.2  
gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]            28   7.2  
gi|239746658 PREDICTED: hypothetical protein [Homo sapiens]            28   7.2  

>gi|239755097 PREDICTED: hypothetical protein XP_002346214 [Homo
           sapiens]
          Length = 207

 Score =  441 bits (1135), Expect = e-124
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MGLWCLPGAQGGSDCTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPT 60
           MGLWCLPGAQGGSDCTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPT
Sbjct: 1   MGLWCLPGAQGGSDCTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPT 60

Query: 61  LANSPEKGKFDVTHPPRMAVARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPP 120
           LANSPEKGKFDVTHPPRMAVARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPP
Sbjct: 61  LANSPEKGKFDVTHPPRMAVARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPP 120

Query: 121 KITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKS 180
           KITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKS
Sbjct: 121 KITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKS 180

Query: 181 QESQGQEQGSHREEKGKTEGRRPAAAL 207
           QESQGQEQGSHREEKGKTEGRRPAAAL
Sbjct: 181 QESQGQEQGSHREEKGKTEGRRPAAAL 207


>gi|239749610 PREDICTED: hypothetical protein XP_002347102 [Homo
           sapiens]
          Length = 207

 Score =  441 bits (1135), Expect = e-124
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MGLWCLPGAQGGSDCTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPT 60
           MGLWCLPGAQGGSDCTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPT
Sbjct: 1   MGLWCLPGAQGGSDCTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPT 60

Query: 61  LANSPEKGKFDVTHPPRMAVARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPP 120
           LANSPEKGKFDVTHPPRMAVARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPP
Sbjct: 61  LANSPEKGKFDVTHPPRMAVARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPP 120

Query: 121 KITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKS 180
           KITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKS
Sbjct: 121 KITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKS 180

Query: 181 QESQGQEQGSHREEKGKTEGRRPAAAL 207
           QESQGQEQGSHREEKGKTEGRRPAAAL
Sbjct: 181 QESQGQEQGSHREEKGKTEGRRPAAAL 207


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 2/97 (2%)

Query: 112 CVPETHAPPKITPRLRAHFTYPSFSQGLQ--SGTLGVGRLHPLLWWAQARVSQVLQTHPP 169
           C P   APP I P  +   T     +G    +G  GVG     L  ++      L     
Sbjct: 36  CSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREA 95

Query: 170 SPQSQDGDPKSQESQGQEQGSHREEKGKTEGRRPAAA 206
           SP    G P+++ S G+E G  R     + G+RPAAA
Sbjct: 96  SPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAA 132


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 16/104 (15%)

Query: 108  TSYQCVPETHAPPKITPRLRAHFTYPSFSQGLQSGTL---GVGRL--------HPLLWWA 156
            T+Y  +P    PP + P +    + P F Q   S TL   G G L         P L  +
Sbjct: 3051 TAYPGLPGL--PPVLLPGMNGPSSLPGFPQN--SNTLTPPGAGMLGFPTSATSSPALSLS 3106

Query: 157  QARVSQVLQTHPPSPQSQDGDPKSQES-QGQEQGSHREEKGKTE 199
             A    +LQT PP P      P S  S Q  EQ +   EK +T+
Sbjct: 3107 SAPTKPLLQTPPPPPPPPPPPPSSSLSGQQTEQQNKESEKKQTK 3150


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 25/135 (18%)

Query: 81   ARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPPKITPRLR--------AHFTY 132
            AR+  P      +P+   L   +     + +C P      +++ + R        +H T 
Sbjct: 2464 ARKHRPHPGAPAEPSPAALPAQQPLEPLAQKCQPPRKKSHRVSGKERPNHSRGDPSHVTQ 2523

Query: 133  PSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKSQES-----QGQE 187
            P  +QG +      G  H          SQ  Q HPPSP   + D K+  S     Q +E
Sbjct: 2524 PPPAQGSKEVLRAPGSPH----------SQ--QLHPPSPTEHEVDVKTPASKPRPDQARE 2571

Query: 188  QGSHREEKGKTEGRR 202
               H ++  K EGRR
Sbjct: 2572 DELHPKQAEKREGRR 2586


>gi|253795481 plexin B3 isoform 2 [Homo sapiens]
          Length = 1932

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 15   CTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRC----VFPTAPTLA---NSPEK 67
            C Q    +  C  V     C   + SLLLC    +PDR     VF T   +     S   
Sbjct: 1107 CIQLGGGLLQCSTV-----CSVNSSSLLLCRSPAVPDRAHPQRVFFTLDNVQVDFASASG 1161

Query: 68   GKFDVTHP-PRMAVARRQGPWGHQRQKP 94
            G+  +  P PR+A   R+GP    R KP
Sbjct: 1162 GQGFLYQPNPRLAPLSREGPARPYRLKP 1189


>gi|29336063 plexin B3 isoform 1 [Homo sapiens]
          Length = 1909

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 15   CTQPAKNVSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRC----VFPTAPTLA---NSPEK 67
            C Q    +  C  V     C   + SLLLC    +PDR     VF T   +     S   
Sbjct: 1084 CIQLGGGLLQCSTV-----CSVNSSSLLLCRSPAVPDRAHPQRVFFTLDNVQVDFASASG 1138

Query: 68   GKFDVTHP-PRMAVARRQGPWGHQRQKP 94
            G+  +  P PR+A   R+GP    R KP
Sbjct: 1139 GQGFLYQPNPRLAPLSREGPARPYRLKP 1166


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
            sapiens]
          Length = 1152

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 10/31 (32%), Positives = 22/31 (70%)

Query: 172  QSQDGDPKSQESQGQEQGSHREEKGKTEGRR 202
            + ++G+ + +E +G+E+G  RE++G+ E  R
Sbjct: 1026 EGEEGEGEGEEEEGEEEGEEREKEGEGEENR 1056



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 20/28 (71%)

Query: 174  QDGDPKSQESQGQEQGSHREEKGKTEGR 201
            ++G+ + +E +G+E   +REE+ + EG+
Sbjct: 1041 EEGEEREKEGEGEENRRNREEEEEEEGK 1068


>gi|153792230 hypothetical protein LOC57670 [Homo sapiens]
          Length = 1884

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 168  PPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRRPAA 205
            PPS  SQ G P    S G+++   RE   +T GR P+A
Sbjct: 1791 PPSRGSQYGGP-GWPSYGEDEAGRREAVPRTSGREPSA 1827


>gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens]
          Length = 528

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 10/68 (14%)

Query: 22  VSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPTLANSP---------EKGKFDV 72
           V +C++ P +   G E+Q +LLCA +   +R V P  P   ++P         EKG+ D 
Sbjct: 421 VVLCNLKPQKMR-GVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDE 479

Query: 73  THPPRMAV 80
              P+  V
Sbjct: 480 ELKPKKKV 487


>gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]
          Length = 1178

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 150  HPLLWWAQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQ 188
            HPL W A  +   +  + P +P  Q   P+ Q  Q Q+Q
Sbjct: 1136 HPLTWRAVPQTDVLPPSQPQAPPQQAAQPQVQAEQQQQQ 1174


>gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens]
          Length = 1507

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 150  HPLLWWAQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQ 188
            HPL W A  +   +  + P +P  Q   P+ Q  Q Q+Q
Sbjct: 1465 HPLTWRAVPQTDVLPPSQPQAPPQQAAQPQVQAEQQQQQ 1503


>gi|7705971 leucine zipper protein 4 [Homo sapiens]
          Length = 313

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 156 AQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRR 202
           AQA  +Q  Q+     QS+    KS+ESQGQ + +H  E+ +    R
Sbjct: 123 AQAEKNQG-QSEGNQHQSEGNPDKSEESQGQPEENHHSERSRNHLER 168


>gi|4503433 E2F transcription factor 3 [Homo sapiens]
          Length = 465

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/59 (32%), Positives = 25/59 (42%)

Query: 118 APPKITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDG 176
           AP      L  + +  S S  LQSG +  G L P    A+     +L T P  P S+ G
Sbjct: 53  APGAYIQILTTNTSTTSCSSSLQSGAVAAGPLLPSAPGAEQTAGSLLYTTPHGPSSRAG 111


>gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens]
          Length = 1562

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 156  AQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQG 189
            +  R+ +   T PPSP S  G    ++ +G+E G
Sbjct: 1085 SSTRLEESEGTQPPSPSSDTGSEGEEDDEGEEHG 1118


>gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens]
          Length = 1560

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 156  AQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQG 189
            +  R+ +   T PPSP S  G    ++ +G+E G
Sbjct: 1083 SSTRLEESEGTQPPSPSSDTGSEGEEDDEGEEHG 1116


>gi|45827729 scribble isoform b [Homo sapiens]
          Length = 1630

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 121 KITPRLRAHFTYPSFSQ---------GLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSP 171
           K TP  + HF      Q         G+Q    G G + P  W          +      
Sbjct: 605 KDTPHYKKHFKISKLPQPEAVVALLQGMQPD--GEGPVAPGGWHNGPHAPWAPRAQKEEE 662

Query: 172 QSQDGDPKSQESQGQEQGSHREEKGKTE 199
           + ++G P+ +E + +E+    EE+  TE
Sbjct: 663 EEEEGSPQEEEEEEEEENRAEEEEASTE 690


>gi|45827731 scribble isoform a [Homo sapiens]
          Length = 1655

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 121 KITPRLRAHFTYPSFSQ---------GLQSGTLGVGRLHPLLWWAQARVSQVLQTHPPSP 171
           K TP  + HF      Q         G+Q    G G + P  W          +      
Sbjct: 605 KDTPHYKKHFKISKLPQPEAVVALLQGMQPD--GEGPVAPGGWHNGPHAPWAPRAQKEEE 662

Query: 172 QSQDGDPKSQESQGQEQGSHREEKGKTE 199
           + ++G P+ +E + +E+    EE+  TE
Sbjct: 663 EEEEGSPQEEEEEEEEENRAEEEEASTE 690


>gi|239756028 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 45/170 (26%), Positives = 62/170 (36%), Gaps = 32/170 (18%)

Query: 25  CDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAP----TLANSPEKGKFDVTHPPRMAV 80
           CD  P  QG  +   S+    GV  P       A     T + SP      V  PP M V
Sbjct: 106 CDGGPKSQGGKSGWLSVPASRGVAPPGAMGILRARGGRGTGSQSPLPASLGVPPPPAMGV 165

Query: 81  ARRQGPWGHQRQKPTNRPLVMMRVKWSTSYQCVPETHAPPKITPRLRAHFTYPSFSQGLQ 140
            R +G  G   + P          +W     C+P     PK     R   + P  +  + 
Sbjct: 166 QRARGGRGVGSESPP---------RWG----CLPTCDGGPKSQGGKRGWLSVP--ASWVV 210

Query: 141 SGTLGVGRLHPLLWWAQARVSQVLQTHP-----PSPQSQDGDPKSQESQG 185
           S T  +G L       +AR  + +   P      SP+  DGDPKS+  +G
Sbjct: 211 SPTPAMGVL-------RARGGRGVALSPYLMGGASPRC-DGDPKSRGGRG 252


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 107  STSYQCVPETHAPPKITPRLRAHFTYPSFSQGLQSGTLGVGRLHPLLWWAQARVSQVLQT 166
            +T Y    +THA            T PSF   + +G+L     HP         +  L  
Sbjct: 1092 ATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHP---------NATLHP 1142

Query: 167  HPPSPQSQDGDPKSQESQGQEQGSH 191
            H P PQ     P  Q+ Q Q  GSH
Sbjct: 1143 HTPHPQPS-ATPTGQQ-QSQHGGSH 1165


>gi|56786157 activating transcription factor 6 [Homo sapiens]
          Length = 670

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 38  AQSLLLCAG--VGLPDRCVFPTAPTLANSPEKGKFDVTHPPRMAVARRQG 85
           AQ +L  AG    LP+  V       ANSP  GK  VT P   +  R  G
Sbjct: 252 AQPVLAVAGGVTQLPNHVVNVVPAPSANSPVNGKLSVTKPVLQSTMRNVG 301


>gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo
           sapiens]
          Length = 674

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 170 SPQSQDGDPKSQESQGQEQGSHREEKGKTEGRRPAAA 206
           SP+S   DP+S E +  E    +EEK   E  +  AA
Sbjct: 249 SPRSSGSDPRSWEYRSGEASEEKEEKAHKETGKGEAA 285


>gi|93277088 mediator of RNA polymerase II transcription, subunit 12
            homolog (S. cerevisiae)-like [Homo sapiens]
          Length = 2145

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 165  QTHPPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRR 202
            +  P SP SQ+ + KS E   Q + +  EEK KT+GR+
Sbjct: 1736 EEEPTSPVSQEPERKSAELSDQGKTTTDEEK-KTKGRK 1772


>gi|56606114 trichohyalin-like 1 [Homo sapiens]
          Length = 904

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 16/74 (21%)

Query: 140 QSGTLGVGRLHPLLWWAQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQGSH-------- 191
           +SG +G  R+ P   W +A+         P   S+  DPK++  +G EQ           
Sbjct: 148 ESGAVGNNRVDP---WREAKTHNF-----PGEASEHNDPKNKHLEGDEQSQEVAQDIQTT 199

Query: 192 REEKGKTEGRRPAA 205
            + +G+ +  +P A
Sbjct: 200 EDNEGQLKTNKPMA 213


>gi|154350246 hypothetical protein LOC84923 isoform 1 [Homo sapiens]
          Length = 207

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 167 HPPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRRP 203
           HPP+  S+   P+ +   G E+ +H   + K   R P
Sbjct: 62  HPPAAMSERLRPRKRRRNGNEEDNHLPPQTKRSSRNP 98


>gi|154350224 hypothetical protein LOC84923 isoform 2 [Homo sapiens]
          Length = 186

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 167 HPPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRRP 203
           HPP+  S+   P+ +   G E+ +H   + K   R P
Sbjct: 62  HPPAAMSERLRPRKRRRNGNEEDNHLPPQTKRSSRNP 98


>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
          Length = 7081

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)

Query: 160  VSQVLQTHPPSPQSQDGDPKSQ---ESQGQEQGSHREEKGKTEGRRPA 204
            +SQ L  +P  P  +DG+ + Q   + +G+EQG+     G+TE ++ A
Sbjct: 4365 LSQNLPLNPKEPGKRDGEGQEQGKEDGEGEEQGN---RDGETEEQQQA 4409


>gi|4505349 necdin [Homo sapiens]
          Length = 321

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 168 PPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRRPAA 205
           PP   + +GDPK+ +   +E  +H+       G  P A
Sbjct: 57  PPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPA 94


>gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 155 WAQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRR 202
           WA   +S     HPP+P +  G    +E  G  + S     GK E +R
Sbjct: 132 WASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQR 179


>gi|239746658 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 411

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 155 WAQARVSQVLQTHPPSPQSQDGDPKSQESQGQEQGSHREEKGKTEGRR 202
           WA   +S     HPP+P +  G    +E  G  + S     GK E +R
Sbjct: 319 WASTFLSAPGPQHPPTPPACSGAATRREPPGNARQSRGVGAGKPEPQR 366


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,363,756
Number of Sequences: 37866
Number of extensions: 519705
Number of successful extensions: 2213
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2164
Number of HSP's gapped (non-prelim): 65
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.