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Search of human proteins with 108389127
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|108389127 hypothetical protein LOC83541 [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46391104 hypothetical protein LOC83541 [Homo sapiens] 592 e-169
gi|108389127 hypothetical protein LOC83541 [Homo sapiens] 592 e-169
gi|13937401 hypothetical protein LOC83541 [Homo sapiens] 592 e-169
gi|22218339 hypothetical protein LOC90362 [Homo sapiens] 181 9e-46
gi|118200352 hypothetical protein LOC642273 [Homo sapiens] 119 4e-27
gi|117956393 glycine/arginine rich protein 1 [Homo sapiens] 105 6e-23
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 51 1e-06
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 51 1e-06
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 51 1e-06
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 49 5e-06
gi|18079216 CASK interacting protein 1 [Homo sapiens] 47 3e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 3e-05
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 46 3e-05
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 46 3e-05
gi|91208420 bassoon protein [Homo sapiens] 46 4e-05
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 45 6e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 45 1e-04
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 45 1e-04
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ... 44 1e-04
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 44 1e-04
gi|145309324 FH2 domain containing 1 [Homo sapiens] 44 2e-04
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 44 2e-04
gi|153792074 proline rich 12 [Homo sapiens] 44 2e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 44 2e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 44 2e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 44 2e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 44 2e-04
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 44 2e-04
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 44 2e-04
>gi|46391104 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 592 bits (1527), Expect = e-169
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA 60
MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA
Sbjct: 1 MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA 60
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP
Sbjct: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR
Sbjct: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
Query: 181 PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG 240
PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG
Sbjct: 181 PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG 240
Query: 241 PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG 295
PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG
Sbjct: 241 PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG 295
>gi|108389127 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 592 bits (1527), Expect = e-169
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA 60
MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA
Sbjct: 1 MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA 60
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP
Sbjct: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR
Sbjct: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
Query: 181 PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG 240
PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG
Sbjct: 181 PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG 240
Query: 241 PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG 295
PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG
Sbjct: 241 PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG 295
>gi|13937401 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 592 bits (1527), Expect = e-169
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA 60
MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA
Sbjct: 1 MPVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA 60
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP
Sbjct: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR
Sbjct: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
Query: 181 PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG 240
PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG
Sbjct: 181 PPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAG 240
Query: 241 PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG 295
PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG
Sbjct: 241 PGSSEGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESPAAEG 295
>gi|22218339 hypothetical protein LOC90362 [Homo sapiens]
Length = 370
Score = 181 bits (458), Expect = 9e-46
Identities = 131/354 (37%), Positives = 180/354 (50%), Gaps = 67/354 (18%)
Query: 3 VHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANT 62
V +SP A+P R+ + P Y R A+ ++ SAVERLEADKAKYVKS V N
Sbjct: 12 VKPVSPAGTFTSAVPLRILNKGPDYFRR-QAEPNPKRLSAVERLEADKAKYVKSQEVINA 70
Query: 63 RQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCR------RPQLDLDILSSLIDLCDS 116
+QEPV+P + +P P +R + +P+ + + R L L+IL ++I+ +
Sbjct: 71 KQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEILKNIINSSEG 130
Query: 117 PVSPA---EASRT--PGRAEGAG----------RPPPATPPRPPP--------------- 146
S + +SR P R+E + P R P
Sbjct: 131 SSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRLLEQSA 190
Query: 147 --------STSAVRRV-DVRPLPASPARPCPSPGP--------AAASSP----------- 178
S+S +R+V V+PL A P P P A+ SP
Sbjct: 191 ESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPACGV 250
Query: 179 ARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPS 238
+R P LQRSKSDLS+R+ R AD+ERFFN+CGLDPEE LG+ + ARA+SDI+SL S
Sbjct: 251 SRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRS 310
Query: 239 AGPGSS--EGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARES 290
A SS E S + ++ A +RVPYG+S +ERNAR+IKWLY ++QARES
Sbjct: 311 ASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARES 364
>gi|118200352 hypothetical protein LOC642273 [Homo sapiens]
Length = 321
Score = 119 bits (297), Expect = 4e-27
Identities = 108/309 (34%), Positives = 136/309 (44%), Gaps = 45/309 (14%)
Query: 19 RLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVA--NTRQEPVQPLLSKQPL 76
RL R P R P + SAVERL AD+AKYV+ E P K P
Sbjct: 14 RLLPRDPA-ATRDPDAARPARRSAVERLAADRAKYVRGRPGTGRGVASEGSGPGAIKCPG 72
Query: 77 FSPETRRTVLTP-SRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEAS------RTPGR 129
P P +RRA+ RP + + S AS + PG+
Sbjct: 73 NDPGPPARAPAPVARRAIARKPLRPDSLIIYRQKCEFVRGSGADGPRASLVKKLFQGPGK 132
Query: 130 ---------AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASS-PA 179
EG P P P P+ PA+P P P+ AA SS PA
Sbjct: 133 DKAPVPRTGDEGKAGNPETVPTTPGPAAD----------PATPETPAPAARSAAPSSVPA 182
Query: 180 RPP----------GLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASS 229
PP GLQRS+SDLS R+S A A+ + FF +CGLDPE LG + A S
Sbjct: 183 APPGPEPRVVRRRGLQRSQSDLSSRYSAALAESDTFFQYCGLDPEVVEALGRENFT-AGS 241
Query: 230 DIVSLAGPSAGPGSSEGGCSRRS----SVTVEERARERVPYGVSVVERNARVIKWLYGLR 285
D V+L S +S G SR S EE E+VP SV+ERNAR+IKWLY +
Sbjct: 242 DCVTLKVRSVSVATSGSGFSRHSGGDDEGLQEEELIEQVPSTTSVIERNARIIKWLYTCK 301
Query: 286 QARESPAAE 294
+A+E+P+ E
Sbjct: 302 KAKETPSQE 310
>gi|117956393 glycine/arginine rich protein 1 [Homo sapiens]
Length = 271
Score = 105 bits (261), Expect = 6e-23
Identities = 99/280 (35%), Positives = 115/280 (41%), Gaps = 52/280 (18%)
Query: 38 RKPSAVERLEADKAKYVKSLHVANTRQEPV----------QPLLSKQPLFSPETRRTVLT 87
R PSAVERLEADKAKYVK+ V RQEP P P SP T R V
Sbjct: 13 RTPSAVERLEADKAKYVKTHQVIARRQEPALRGSPGPLTPHPCNELGPPASPRTPRPVRR 72
Query: 88 PSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRPPPS 147
S R LP P SLI A ++ + +G R PR
Sbjct: 73 GSGRRLPRP-----------DSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGAPRDAAP 121
Query: 148 TSAVRRVDVRPLPASPARPCPSPGPAAASSPARPPGLQRSKSDLSERFSRAAADLERFFN 207
+S PAS RP S G AA G K L S ++ ERFFN
Sbjct: 122 SS----------PASTERPAASGGWAAPQDAPEAAG----KRALCPTCSLPLSEKERFFN 167
Query: 208 FCGLDPEEARGLGVAHLARAS--SDIVSLAGPSAGPGS--------------SEGGCSRR 251
+CGL+ LG + S +D AG S PGS S GG
Sbjct: 168 YCGLERALVEVLGAERFSPQSWGADASPQAGTSPPPGSGDASDWTSSDRGVDSPGGAGGG 227
Query: 252 SSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARESP 291
AR+R P VSVVERNARVI+WLYG ++AR P
Sbjct: 228 GGSEAAGSARDRRP-PVSVVERNARVIQWLYGCQRARGPP 266
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 50.8 bits (120), Expect = 1e-06
Identities = 65/205 (31%), Positives = 79/205 (38%), Gaps = 27/205 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P PG SAP P L P + L PA R P A + ++ ++ +
Sbjct: 62 PYQCGDPGTASAP--PAWLLLVSPEHGL-APAPTTIRDPEAGHQERPEEEGEDEAEASSG 118
Query: 62 TRQEPVQPLLSKQPLFSPETRRT-----VLTPSRRALPGPCRR---------PQLDLDIL 107
+ +EP L SP R VL R L G RR P+ L L
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 108 SS--LIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRP------PPSTSAVRRVDVRPL 159
+ LC SP ++ PG A PA+PPRP PP S V VR L
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAP-QHPAAPASPPRPSTAGAIPPLRSHKPTVAVRIL 237
Query: 160 PASPARPCPSPGPAA-ASSPARPPG 183
PA P P SPGP SSPAR G
Sbjct: 238 PAPPRPPISSPGPIIWVSSPARSLG 262
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 50.8 bits (120), Expect = 1e-06
Identities = 65/205 (31%), Positives = 79/205 (38%), Gaps = 27/205 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P PG SAP P L P + L PA R P A + ++ ++ +
Sbjct: 62 PYQCGDPGTASAP--PAWLLLVSPEHGL-APAPTTIRDPEAGHQERPEEEGEDEAEASSG 118
Query: 62 TRQEPVQPLLSKQPLFSPETRRT-----VLTPSRRALPGPCRR---------PQLDLDIL 107
+ +EP L SP R VL R L G RR P+ L L
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 108 SS--LIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRP------PPSTSAVRRVDVRPL 159
+ LC SP ++ PG A PA+PPRP PP S V VR L
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAP-QHPAAPASPPRPSTAGAIPPLRSHKPTVAVRIL 237
Query: 160 PASPARPCPSPGPAA-ASSPARPPG 183
PA P P SPGP SSPAR G
Sbjct: 238 PAPPRPPISSPGPIIWVSSPARSLG 262
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 50.8 bits (120), Expect = 1e-06
Identities = 65/205 (31%), Positives = 79/205 (38%), Gaps = 27/205 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P PG SAP P L P + L PA R P A + ++ ++ +
Sbjct: 62 PYQCGDPGTASAP--PAWLLLVSPEHGL-APAPTTIRDPEAGHQERPEEEGEDEAEASSG 118
Query: 62 TRQEPVQPLLSKQPLFSPETRRT-----VLTPSRRALPGPCRR---------PQLDLDIL 107
+ +EP L SP R VL R L G RR P+ L L
Sbjct: 119 SEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 108 SS--LIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRP------PPSTSAVRRVDVRPL 159
+ LC SP ++ PG A PA+PPRP PP S V VR L
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAP-QHPAAPASPPRPSTAGAIPPLRSHKPTVAVRIL 237
Query: 160 PASPARPCPSPGPAA-ASSPARPPG 183
PA P P SPGP SSPAR G
Sbjct: 238 PAPPRPPISSPGPIIWVSSPARSLG 262
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 48.9 bits (115), Expect = 5e-06
Identities = 52/162 (32%), Positives = 67/162 (41%), Gaps = 44/162 (27%)
Query: 60 ANTRQEPVQPLLSK-------QPLFSPE--TRRT-----VLTPSRRA-LPGPCRRPQLDL 104
A +R P +P K PLFSP T +T + T RR+ LPG P+ L
Sbjct: 163 AQSRPSPFRPAAPKAGPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDLPGGLAGPRGGL 222
Query: 105 DILSSLIDLCDSPVSPAEASRTPGRAEGA-----GRPP------------PATPPRPPPS 147
+ SL +P S A TPG G+ G PP PA PPR PP
Sbjct: 223 NTSRSLYSGLQNPCSTA----TPGPPLGSFPFLPGGPPVGAEAWARRVPQPAAPPRRPPQ 278
Query: 148 TSAVRRVDVRPLPASPAR-------PCPSPGPAAASSPARPP 182
+++ +RP P +PA PC SPGP + PP
Sbjct: 279 SASSLSASLRP-PGAPATFLRPSPIPCSSPGPWQSLCGLGPP 319
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.6 bits (109), Expect = 3e-05
Identities = 56/181 (30%), Positives = 68/181 (37%), Gaps = 32/181 (17%)
Query: 6 LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANTRQE 65
L P P A P L P P +G ARKP+ K V + V +
Sbjct: 1191 LPPPPPPAEPPPTDLAHLPP----LPPPEGEARKPAK----PPVSPKPVLTQPVPKLQGS 1242
Query: 66 PVQPLLSKQPL---FSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAE 122
P P K PL SPE +R TP P +P P +P
Sbjct: 1243 PT-PTSKKVPLPGPGSPEVKRAHGTP-----PPVSPKPP-------------PPPTAPKP 1283
Query: 123 ASRTPGRAEGAGRPPPA-TPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPARP 181
G G+ P PA +P R PP+ A L ASPA+P PSPG A PA+P
Sbjct: 1284 VKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKP-PSPGAPALHVPAKP 1342
Query: 182 P 182
P
Sbjct: 1343 P 1343
Score = 44.3 bits (103), Expect = 1e-04
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 120 PAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPA--AASS 177
P +P G PPP +P PPP T+ V LP+ A P P+P PA ++
Sbjct: 1251 PLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAA 1310
Query: 178 PARPPG 183
A+PPG
Sbjct: 1311 LAKPPG 1316
Score = 37.4 bits (85), Expect = 0.016
Identities = 38/128 (29%), Positives = 49/128 (38%), Gaps = 11/128 (8%)
Query: 57 LHVANTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDS 116
L A T V P K P T R T +L G R ++L D
Sbjct: 661 LQAAMTGPAEVGPTTEKPSSHLPPTPRAT-TRQDSSLGGRARHMSSSQELLG---DGPPG 716
Query: 117 PVSPAEASRTPGRAEGAGRPPPATPPR---PPPSTSAVRRVDVRPLPASPARPCPSPGPA 173
P SP S+ EG P P TPPR P +++R V P+P P + P PG +
Sbjct: 717 PSSPMSRSQEYLLDEG---PAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLP-PGTS 772
Query: 174 AASSPARP 181
+ P P
Sbjct: 773 HFTPPQTP 780
Score = 30.4 bits (67), Expect = 1.9
Identities = 47/181 (25%), Positives = 64/181 (35%), Gaps = 41/181 (22%)
Query: 30 RGPADGGAR-KPSAVERLEADKAKYVKSLHVANTRQEPVQPLLSKQPLFSPETRRTVLTP 88
RGP+ G A + + ++EA A + + +QE V+ +L++ S +R
Sbjct: 1101 RGPSKGEAGVEGPPLAKVEAS-ATLKRRIRAKQNQQENVKFILTE----SDTVKRRPKAK 1155
Query: 89 SRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPA--------- 139
R A P P P L S+ V AS G E PPPA
Sbjct: 1156 EREAGPEP--PPPL------SVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAH 1207
Query: 140 TPPRPPPS-----------------TSAVRRVDVRPLPASPARPCPSPG-PAAASSPARP 181
PP PPP T V ++ P P S P P PG P + P
Sbjct: 1208 LPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTP 1267
Query: 182 P 182
P
Sbjct: 1268 P 1268
Score = 28.5 bits (62), Expect = 7.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 119 SPAEASRTPGRAEG-AGRPPPATPPRPPP--STSAVRRVDVRPLPASPARP 166
+PA A + R++ A RP PP PPP S+SA+ ++ P A P
Sbjct: 922 APAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPDAEP 972
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 46.2 bits (108), Expect = 3e-05
Identities = 64/228 (28%), Positives = 84/228 (36%), Gaps = 55/228 (24%)
Query: 67 VQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRT 126
V PLL+ PL P + L S A P P P L L +L P+ +
Sbjct: 757 VPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQAL---------PSPPASF 807
Query: 127 PGRAE---GAGRP--PPATPPRPPPSTSAVRRVDVRPLPAS------PARPCPSPGP--- 172
PG+A A P P ATPP P A + V P P + P RP P+PGP
Sbjct: 808 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP-PTPGPDTS 866
Query: 173 ------AAASSPARPPGLQRSKS------DLSERFSRAAADLERFFNF-------CGLDP 213
A +P PP RS S DL+ S A + E + P
Sbjct: 867 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 926
Query: 214 EEARGLGVAHLA---RASSDIVSLAG---------PSAGPGSSEGGCS 249
L H A R + ++ G P+ GPGS++G C+
Sbjct: 927 PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCT 974
Score = 43.9 bits (102), Expect = 2e-04
Identities = 59/206 (28%), Positives = 78/206 (37%), Gaps = 45/206 (21%)
Query: 7 SPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANTRQEP 66
+PG PS PA+ R R L PA PSA R + + S ++ EP
Sbjct: 168 TPGTPS-PAMARRSRAAGTEVGLPRPA------PSARPRPPTEGPRKSVSSASEHSTTEP 220
Query: 67 VQPLLSKQPLFSPETRRTV---LTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEA 123
P ++P +R L+ S L P R S +P +PA
Sbjct: 221 -SPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR----------SGPSARGTPRAPAHP 269
Query: 124 SRTPGRAEGAGRPPPATPPR-----------------PPPSTSAVRRVD-----VRPLPA 161
S+ + A RPP TPPR P PS + R V PLPA
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPA 329
Query: 162 S--PARPCPSPGPAAASSPARPPGLQ 185
+ P+ P +P P A SP+ PP LQ
Sbjct: 330 TLPPSPPLATPLPLAPPSPSAPPSLQ 355
Score = 42.4 bits (98), Expect = 5e-04
Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 32 PADGGARKPSAVERLEADKAKYVKSLHVANTRQEPVQPLLSKQPLFSPETRRTVLTPSRR 91
P+ R+PSA L+ ++ + S LS P R T P+
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATP----------LSSPARSGPSARGTPRAPAHP 269
Query: 92 ALPGP-----CRRPQLD---LDILSSLIDLCDSPVSPAEASRTPGRA----EGAGRPPPA 139
+ P P R PQ+ D +L L SP++ S T R + A P PA
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPA 329
Query: 140 T-PPRPPPST-------SAVRRVDVRPLPASPARPCPSPGPAAASSP--ARPPGLQ 185
T PP PP +T S ++ LP+ PA P PS P + ++P PP LQ
Sbjct: 330 TLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATP-PSQAPPSMTTPPMQAPPSLQ 384
Score = 38.9 bits (89), Expect = 0.005
Identities = 39/122 (31%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 78 SPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPP 137
SP T TPS A P P P L L L SP++ P A + P
Sbjct: 574 SPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAP 633
Query: 138 PATPPRPP------PSTSAVRRVDVRPLPASPARPCPSPGPAAASSPARPPGLQRSKSDL 191
P+ P PP PS A + V L A P P PSP A SP P + S +
Sbjct: 634 PSPPASPPLSPLATPSPQAPNALAVHLLQA-PFSPPPSPPVQAPFSPPASPPVSPSATPP 692
Query: 192 SE 193
S+
Sbjct: 693 SQ 694
Score = 37.4 bits (85), Expect = 0.016
Identities = 50/193 (25%), Positives = 72/193 (37%), Gaps = 36/193 (18%)
Query: 11 PSAPAL--PCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANTRQEPVQ 68
P +P L P L P PA P + L+A + SL +++ Q P+
Sbjct: 452 PDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQA-----LSSL-ASHSPQAPLS 505
Query: 69 PLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPG 128
L+ PL ET+ ++ PS + P P L+ +L L P+ A A T
Sbjct: 506 SLIMP-PL---ETQSSLAPPSLQTPPASLTTPPLE-----NLPSLAPPPLQTASAPLTTP 556
Query: 129 RAEGAGRP-------PPATPPRPPPST------------SAVRRVDVRPLPASPARPCPS 169
E P PP+ PPP T A+ ++ LP+ P P +
Sbjct: 557 HLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLAT 616
Query: 170 PGPAAASSPARPP 182
P P A A PP
Sbjct: 617 PPPQAPPXLALPP 629
Score = 37.0 bits (84), Expect = 0.021
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 119 SPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSP 178
SPA A R+ G P PA RP P T R + + ++ P PAA P
Sbjct: 173 SPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPR----KSVSSASEHSTTEPSPAARRRP 228
Query: 179 ARPPGLQRSKS 189
+ GLQR S
Sbjct: 229 SAGGGLQRPAS 239
Score = 37.0 bits (84), Expect = 0.021
Identities = 51/186 (27%), Positives = 68/186 (36%), Gaps = 18/186 (9%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P+ T P AP ALP L+ P A P + + +A ++H+
Sbjct: 613 PLATPPPQAPPXLALPP----------LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 662
Query: 62 TRQEPVQPLLSKQPLFSPETRRTV---LTPSRRALPGPCRRPQLDLDILSSLIDLCDSPV 118
P P Q FSP V TP +A P P + + S
Sbjct: 663 APFSP-PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT 721
Query: 119 SPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAA--AS 176
P +A P A + PP+ P PP S SA V PL A+P P PA+ S
Sbjct: 722 PPPQAP--PPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMS 779
Query: 177 SPARPP 182
A+PP
Sbjct: 780 PLAKPP 785
Score = 32.7 bits (73), Expect = 0.39
Identities = 50/183 (27%), Positives = 64/183 (34%), Gaps = 32/183 (17%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P+ T SP AP+A A+ +LL+ P P V+ + A S
Sbjct: 644 PLATPSPQAPNALAV----------HLLQAPFSPPPSPP--VQAPFSPPASPPVSPSATP 691
Query: 62 TRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPA 121
Q P P L+ PL P + S A P P P L L V P+
Sbjct: 692 PSQAP--PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ---------VPPS 740
Query: 122 EASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPAS--PARPCPSPGPAAASSPA 179
+ P P ATPP P A + V P P + P P P P A + A
Sbjct: 741 PPASPP-------MSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALA 793
Query: 180 RPP 182
PP
Sbjct: 794 TPP 796
Score = 29.6 bits (65), Expect = 3.3
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 23/89 (25%)
Query: 123 ASRTPG-RAEGAGRPPPATPPRPPPSTS--------AVRRVDVRPL-------------- 159
A+RTP RA G P P PRPPP + A V +PL
Sbjct: 13 AARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 160 PASPARPCPSPGPAAASSPARPPGLQRSK 188
A A P S G ++ + +RPP R +
Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASGRGE 101
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 46.2 bits (108), Expect = 3e-05
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 117 PVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAAS 176
P P PGRA+ RPP PR P STSA R P S +R SP P+ +
Sbjct: 1208 PKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRR-ESPSPSHQA 1266
Query: 177 SPARPP 182
P PP
Sbjct: 1267 RPGVPP 1272
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 46.2 bits (108), Expect = 3e-05
Identities = 59/219 (26%), Positives = 80/219 (36%), Gaps = 34/219 (15%)
Query: 3 VHTLSPGAPSAP-ALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
+H P P LP + + L R P GG+ A +V L
Sbjct: 507 LHQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGG 566
Query: 62 TRQEPVQP--LLSKQPLFSPETRRTVLTP----SRRALPGPCRRPQLD---------LDI 106
+R+ P P LS +S ++ L P A PG + P+ + +
Sbjct: 567 SRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASV 626
Query: 107 LSSLIDLCDSPVSPAEASR------TPGRAEGAGRPPPATPP--RPPPSTSAVRRVDVRP 158
SSL LC S PA + R TP P P P PPPS P
Sbjct: 627 SSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPR------SP 680
Query: 159 LPASPARPCPS--PGPAAA--SSPARPPGLQRSKSDLSE 193
PA+PA P+ PGP + +SP PP Q + + L E
Sbjct: 681 NPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQE 719
Score = 35.0 bits (79), Expect = 0.079
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 29/190 (15%)
Query: 2 PVHTLSPGA-----PSAPALPCRLRTRVPGYLLRGPADGGARKPSAVER---LEADKAKY 53
P TLSP + P LP P L PA G +P ER L + A
Sbjct: 574 PERTLSPSSGYSSQSGTPTLP-------PKGLAGPPASPGKAQPPKPERVTSLRSPGASV 626
Query: 54 VKSL-HVANTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLID 112
SL + ++ +P S + +P R V+ P + +P P P
Sbjct: 627 SSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPK-VPAPFSPPPSK--------P 677
Query: 113 LCDSPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGP 172
+P +PA A+ P G A+P PP + + + P+ + P PSP P
Sbjct: 678 RSPNPAAPALAA--PAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPP 735
Query: 173 AAASSPARPP 182
+ P PP
Sbjct: 736 --SYHPPPPP 743
Score = 33.1 bits (74), Expect = 0.30
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 116 SPVSPAEASRTPGRA------EGAGRPPPATPPR-----PPPSTSAVRRVDVRPLPASPA 164
+P +PA AS PG E G PPR P + S ++ V +R + A
Sbjct: 838 APPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGG 897
Query: 165 RPCPSPGPAAASSPAR 180
P P+ GP+A P R
Sbjct: 898 APTPALGPSAPQKPLR 913
Score = 29.6 bits (65), Expect = 3.3
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 111 IDLCDSPVSPAEASRTPGRAEGAGRP-PPATPPRPPPSTSAVRRVDVRPLPASPARPCPS 169
+ + D P P EA + E AG P P S+S+ + ++P P SP P
Sbjct: 782 LSMADFP-PPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQP-PGSPDPPPAP 839
Query: 170 PGPAAASS 177
P PA ASS
Sbjct: 840 PAPAPASS 847
Score = 29.6 bits (65), Expect = 3.3
Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P L P AP P LR + G PA A RL+A + L A
Sbjct: 899 PTPALGPSAPQKP-----LRRALSGRASPVPAPSSGLH--AAVRLKACSLAASEGLSSAQ 951
Query: 62 TR-------QEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLC 114
+ P P + +FS +R+ L P + L ++++ L +
Sbjct: 952 PNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERP----VSPETQADLQRNLVAELRSIS 1007
Query: 115 DS--PVSPAEASRTP---GRAEGAGRPPPATP--PRPPPSTS 149
+ P +P ++ + P R G PPPA+P PR P T+
Sbjct: 1008 EQRPPQAPKKSPKAPPPVARKPSVGVPPPASPSYPRAEPLTA 1049
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 45.8 bits (107), Expect = 4e-05
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Query: 115 DSPVSPAEASRTPGRAEGAGRPPPATPPRPP---PSTSAVRRVDVRPLPASPARPCPSPG 171
D P+ P A PG G G P + P P+ A R V P+P P P PG
Sbjct: 13 DGPLPPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPG 72
Query: 172 PAAAS---SPARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVA 222
P + S P P G QR+ S ++ S E P E R G A
Sbjct: 73 PGSTSRRLDPKEPLGNQRAASPTPKQASATTPGHE--------SPRETRAQGPA 118
Score = 39.3 bits (90), Expect = 0.004
Identities = 56/200 (28%), Positives = 80/200 (40%), Gaps = 35/200 (17%)
Query: 12 SAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLH----VANTRQEP- 66
SAPA+P + PGY +R SA +D K + H ++ EP
Sbjct: 3687 SAPAMP---KKGQPGYPSSAEYSQPSRASSAYHHA-SDSKKGSRQAHSGPAALQSKAEPQ 3742
Query: 67 VQPLLS-KQPLFSPETRRTVLTPSRRALPGPC--RRPQLD-----LDILSSLIDLCDSPV 118
QP L +Q P+ ++ PS R +P R+PQ L + L + +
Sbjct: 3743 AQPQLQGRQAAPGPQQSQS---PSSRQIPSGAASRQPQTQQQQQGLGLQPPQQALTQARL 3799
Query: 119 S----PAEASRTPGRAEGAGRPPP----ATPPRP--PP---STSAVRRVDVRPLP--ASP 163
P P ++ AG+P P AT P+P PP T+ + P A
Sbjct: 3800 QQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGSKGTAKAPQQGRAPQ 3859
Query: 164 ARPCPSPGPAAASSPARPPG 183
A+P P PGPA + ARP G
Sbjct: 3860 AQPAPGPGPAGVKAGARPGG 3879
Score = 37.0 bits (84), Expect = 0.021
Identities = 52/208 (25%), Positives = 77/208 (37%), Gaps = 42/208 (20%)
Query: 66 PVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEAS- 124
P+ P S+QP R + +P ++ P +P L +S + SP+ P++AS
Sbjct: 530 PLPPPTSQQPPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPL-PSKASP 588
Query: 125 ----------------------RTPGRAEGAGRPPPATPPRP--PPSTSAVRRVDVRPLP 160
R P +AE +PPP T P P P S VRR + P
Sbjct: 589 QAKPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKSGVRRAE----P 644
Query: 161 ASP---ARPCPSPGPAAASSPARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEAR 217
A+P A P G A +P S+S S + ++D G+ ++
Sbjct: 645 ATPVVKAVPEAPKGGEAEDLVGKPYSQDASRSPQSLSDTGYSSD--------GISSSQSE 696
Query: 218 GLGVAHLARASSDIVSLAGPSAGPGSSE 245
GV D + GP P SE
Sbjct: 697 ITGVVQQEVEQLDSAGVTGPHP-PSPSE 723
Score = 33.9 bits (76), Expect = 0.18
Identities = 37/135 (27%), Positives = 50/135 (37%), Gaps = 22/135 (16%)
Query: 111 IDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
+ L SP SP+ AS+ G G P TP +T+AV PCP+
Sbjct: 1354 LKLHSSPASPSSASKEIGMPFSQG---PGTP-----ATTAVA-------------PCPAG 1392
Query: 171 GPAAASSPARPPGLQRSKSDLSERFSRAAADLERFFNFCGLD-PEEARGLGVAHLARASS 229
P +PA P G +RS S S S + + D P+ GL A A
Sbjct: 1393 LPRGYMTPASPAGSERSPSPSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREK 1452
Query: 230 DIVSLAGPSAGPGSS 244
+ + G P S
Sbjct: 1453 PLSASDGEGGTPQPS 1467
Score = 32.0 bits (71), Expect = 0.67
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 28/138 (20%)
Query: 71 LSKQPLFSPETRRTVLTPSRR-ALPGPCRRPQLDLDILSSLIDLCDSPV---SPAEASRT 126
L++ P+ +P R L P+ P P R P ++S + + PV PA A
Sbjct: 2241 LTRVPMIAP---RVPLGPTGLYRYPAPSRFP------IASSVPPAEGPVYLGKPAAA--- 2288
Query: 127 PGRAEGAGRPP-PATP-------PRPPPSTSAVRRVDVRPLPASPA--RPCPSPGPAAAS 176
+A GAG P P P P P + +A++ P PA A +P P S
Sbjct: 2289 --KAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPAPAPLAGQKPPADAAPGGGS 2346
Query: 177 SPARPPGLQRSKSDLSER 194
PG ++ ++ ER
Sbjct: 2347 GALSRPGFEKEEASQEER 2364
Score = 31.2 bits (69), Expect = 1.1
Identities = 39/148 (26%), Positives = 51/148 (34%), Gaps = 20/148 (13%)
Query: 72 SKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAE 131
S+Q L SP L+P+ P +P + P P SR A
Sbjct: 238 SQQQLHSP-----ALSPAHSPAKQPLGKPDQERS---------RGPGGPQPGSRQAETAR 283
Query: 132 GAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPA-AASSPARPPGL----QR 186
P PA PP V +P S A P P G A A S+ A P GL Q
Sbjct: 284 ATSVPGPAQAAAPP-EVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSATAVPAGLGATEQT 342
Query: 187 SKSDLSERFSRAAADLERFFNFCGLDPE 214
+ + F A+ L + + PE
Sbjct: 343 QEGLTGKLFGLGASLLTQASTLMSVQPE 370
Score = 29.3 bits (64), Expect = 4.3
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 15/95 (15%)
Query: 120 PAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARP-CPSPGPAAASSP 178
P + R + +GR P +P R TS + PLP+S P C + S+P
Sbjct: 125 PRRTLQVDSRTQRSGRSPSVSPDRGSTPTSPYSVPQIAPLPSSTLCPICKTSD--LTSTP 182
Query: 179 ARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDP 213
++P F+ + N CG +P
Sbjct: 183 SQP------------NFNTCTQCHNKVCNQCGFNP 205
Score = 28.1 bits (61), Expect = 9.6
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 15/71 (21%)
Query: 117 PVSPAEASRTPGRAEGAGRPPPATP-----PRPPPSTSAVRRVDVRPLPASPARPCPSPG 171
P+SP+ S +P + G P P P P++ +P SP P PSP
Sbjct: 1479 PLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASD---------MPRSPGAPTPSPM 1529
Query: 172 PA-AASSPARP 181
A +P RP
Sbjct: 1530 VAQGTQTPHRP 1540
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 45.4 bits (106), Expect = 6e-05
Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 19/142 (13%)
Query: 85 VLTPSRRAL--PGPCRRPQLDLDI----LSSLIDLCDSPVSPAEASRTPGRAEGAGRPPP 138
V+ P+ A P P P+ + I + LI L +P + A P R +G PP
Sbjct: 1346 VILPTATATLRPKPKEEPKYSIHIDQMPQTRLIHLSTAPEASLPARSPPSRQPPSGGPPE 1405
Query: 139 ATPPRPPPSTSAVRRVDVRPLP------------ASPARPCPSPGPAAASSPARPPGLQR 186
A P +PPP +PLP P P PGP+ S
Sbjct: 1406 APPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLGDPGEPAAHPGPSTGPSTKNENVATL 1465
Query: 187 SKSDLSERFSR-AAADLERFFN 207
S S L R SR A D E+ +
Sbjct: 1466 SVSSLERRKSRYAELDFEKIMH 1487
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 44.7 bits (104), Expect = 1e-04
Identities = 64/222 (28%), Positives = 82/222 (36%), Gaps = 49/222 (22%)
Query: 7 SPGAPSAPALPCRLRTRV---------PGYLLRGPADGGARKPSAVERLEADKAKYVKSL 57
+P P+ PA P L R PG GP G P A + L A + S
Sbjct: 153 APAGPAKPAGPAALAARAGPGPGPGPGPG---PGPGPGKPAGPGAAQTLNGSAA-LLNSH 208
Query: 58 HVANTRQEPVQPLLSKQP-----LFSPETRRTVL---------TPSRRALPGPCRRPQLD 103
H A P L++ P L P TV+ P A P P P
Sbjct: 209 HAA----APAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA 264
Query: 104 LDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRPPPST-----SAVRRVDVRP 158
+ P +PA +R PG G PP A P PPP+ SA P
Sbjct: 265 APAAAPP----PPPPAPATLARPPGHPAG---PPTAAPAVPPPAAAQNGGSAGAAPAPAP 317
Query: 159 LPASPARPCPSPGP-AAASSPARPPGLQRSKSDLSERFSRAA 199
PA PGP AAA++PA PG+ K++ +R +AA
Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPA--PGV---KAESPKRVVQAA 354
Score = 40.8 bits (94), Expect = 0.001
Identities = 42/130 (32%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 124 SRTPGRAEGAGRPPPA-----TPPRPPPSTSAVRRVD--VRPLPASPARPCPSPGPAAAS 176
S +P A GAG PA P PPP+ A RP P SP RP GPA +
Sbjct: 64 SGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 177 SPARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAG 236
+ RPP + S + A A G +P A G A A ++ + + AG
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVA--------AGPEPAPA---GPAKPAGPAA-LAARAG 171
Query: 237 PSAGPGSSEG 246
P GPG G
Sbjct: 172 PGPGPGPGPG 181
Score = 34.7 bits (78), Expect = 0.10
Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 13/78 (16%)
Query: 120 PAEASRTPGRAEGAGRPPPATPPRP-PPSTSAVRRVDVRPLPASPARPC----------- 167
P A R G RP P +P RP P+ A +RP P A C
Sbjct: 89 PPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA 148
Query: 168 -PSPGPAAASSPARPPGL 184
P P PA + PA P L
Sbjct: 149 GPEPAPAGPAKPAGPAAL 166
Score = 33.5 bits (75), Expect = 0.23
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 30/98 (30%)
Query: 133 AGRPPPATPPRPPPSTSAVRRVDV----------RPLPASPARPC--------------- 167
AG PPA RPPP SA V P PA PA+P
Sbjct: 117 AGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Query: 168 -----PSPGPAAASSPARPPGLQRSKSDLSERFSRAAA 200
P PGP + P L S + L+ + A A
Sbjct: 177 GPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPA 214
Score = 29.6 bits (65), Expect = 3.3
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 120 PAEASRTP-GRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSP 178
P A TP G +GA + R P +T++ R + P +P P P P +
Sbjct: 390 PPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNF 449
Query: 179 ARPPGLQRSKSD 190
PPG+ +S+
Sbjct: 450 QLPPGMVLVRSE 461
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 44.7 bits (104), Expect = 1e-04
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 75 PLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAG 134
P+ S + R + TP R P + P++++ + + SP P E + P
Sbjct: 530 PVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRP-PITTSPPVPQEPAPVPSPPRAP- 587
Query: 135 RPPPATP-PRPPPSTSAVRRVDVR----------PLPASPARPCPSPGPAAASSPARP 181
PP+TP P P S +R R P PA P P PSP PA A+S RP
Sbjct: 588 -TPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPATSSRRP 644
Score = 41.2 bits (95), Expect = 0.001
Identities = 62/224 (27%), Positives = 81/224 (36%), Gaps = 42/224 (18%)
Query: 87 TPSRRALPGPCRRPQLDLDILSSL---IDLCDSPVSPAEASRTPGRAEGAGRPPPATPPR 143
+PSRR L G P SSL I P PA R+ + A RPPP+
Sbjct: 1871 SPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGDPDFPAPPRRSRRPSPLAPRPPPSRWAS 1930
Query: 144 PPPSTSAVRRVDVRPLPASPARP-CPSPG----PAAASSPARPPGLQRSKSDLSERFSRA 198
PP TS RV P P S P+ G P A SP P L D+ +
Sbjct: 1931 PPLKTSPQLRV---PPPTSVVTALTPTSGELAPPGPAPSPPPPEDLGPDFEDMEVVSGLS 1987
Query: 199 AADLERFFNFCGLDPEE-----ARGLGVAHLARASSD----------------IVSLAG- 236
AADL+ + G +P + A +G +H S +VS G
Sbjct: 1988 AADLDFAASLLGTEPFQEEIVAAGAMGSSHGGPGDSSEEESSPTSRYIHFPVTVVSAPGL 2047
Query: 237 -PSAGPGSS--------EGGCSRRSSVTVEERARERVPYGVSVV 271
PSA PG+ + G + + R + P G VV
Sbjct: 2048 APSATPGAPRIEQLDGVDDGTDSEAEAVQQPRGQGTPPSGPGVV 2091
Score = 35.4 bits (80), Expect = 0.060
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 9/56 (16%)
Query: 136 PPPATPPRP-------PPSTSAVRRVDVRPLP--ASPARPCPSPGPAAASSPARPP 182
PPP TPP P PPSTS + P P + P P P P PA PP
Sbjct: 403 PPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPP 458
Score = 34.3 bits (77), Expect = 0.13
Identities = 34/134 (25%), Positives = 45/134 (33%), Gaps = 16/134 (11%)
Query: 64 QEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPA-- 121
+E + ++++ + + E L P P P P L S LC P P
Sbjct: 379 EEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSP 438
Query: 122 ----EASRTPGRAEGAGRPPPATPP-------RPP--PSTSAVRRVDVRPLPASPARPCP 168
P + E PPP P RPP PS A R R P + P P
Sbjct: 439 PPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREA-ARAGPEGTSPPTP 497
Query: 169 SPGPAAASSPARPP 182
+P A P P
Sbjct: 498 TPSTATGGPPEDSP 511
Score = 33.9 bits (76), Expect = 0.18
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 117 PVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPC-----PSPG 171
P++P S P + PPP P PPP S PLP+ P P SP
Sbjct: 405 PLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSP------PPLPSPPPPPAQEEQEESPP 458
Query: 172 PAAASSPARPPGLQRSKSDLSERFSRAAA 200
P ++ +R G R S+R R AA
Sbjct: 459 PVVPATCSRKRG--RPPLTPSQRAEREAA 485
Score = 32.3 bits (72), Expect = 0.51
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 141 PPRPPP-STSAVRRVDVRPLPASPARPCPSPGPAAASSPARPP 182
PP+PP S V R + P P P P P P A +P P
Sbjct: 551 PPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTP 593
Score = 32.0 bits (71), Expect = 0.67
Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 19/142 (13%)
Query: 65 EPVQPLLSKQPLFSPETRRTV-LTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEA 123
EP +P SK L + + V + +P P ++P L I SP +P
Sbjct: 2182 EPPKPATSKIILVNKLGQVFVKMAGEGEPVPPPVKQPPLPPTI---------SPTAPTSW 2232
Query: 124 SRTPGRAEGA----GRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPA 179
+ PG G G PA PP PPP T + PASP R + S
Sbjct: 2233 TLPPGPLLGVLPVVGVVRPAPPPPPPPLTLVLSSG-----PASPPRQAIRVKRVSTFSGR 2287
Query: 180 RPPGLQRSKSDLSERFSRAAAD 201
PP K+ + A+ D
Sbjct: 2288 SPPAPPPYKAPRLDEDGEASED 2309
Score = 30.4 bits (67), Expect = 1.9
Identities = 59/218 (27%), Positives = 74/218 (33%), Gaps = 49/218 (22%)
Query: 7 SPGAPSAPALPCRLRTRVPG-----YLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
S G ++PA P R +PG L GPA KP+ + + +K V + +A
Sbjct: 2149 SQGLTASPADPTRTFAWLPGAPGVRVLSLGPAPEPP-KPATSKIILVNKLGQV-FVKMAG 2206
Query: 62 TRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCR---------RPQLDLDILSSLID 112
EPV P + + PL P T S PGP RP +
Sbjct: 2207 -EGEPVPPPVKQPPL--PPTISPTAPTSWTLPPGPLLGVLPVVGVVRPAPPPPPPPLTLV 2263
Query: 113 LCDSPVSPA-EASRTPGRAEGAGRPPPATPPRPPP------------------------- 146
L P SP +A R + +GR PPA PP P
Sbjct: 2264 LSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGEASEDTPQVPGLGSGGFSR 2323
Query: 147 ---STSAVRRVDVRPLPASPARPCPSPGPAAASSPARP 181
T VR V P PA SPGP SP P
Sbjct: 2324 VRMKTPTVRGVLDLDRPGEPAGE-ESPGPLQERSPLLP 2360
Score = 30.0 bits (66), Expect = 2.5
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 21/66 (31%)
Query: 136 PPPATPPRPPPSTSAVRRVDVR--------------------PLPASPARPCPSPGPAAA 175
PPPA P P P+TS+ R + +R P +P P P P P A
Sbjct: 627 PPPAPSPPPAPATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPEP-PPAD 685
Query: 176 SSPARP 181
SPA P
Sbjct: 686 DSPAEP 691
>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
sapiens]
Length = 271
Score = 44.3 bits (103), Expect = 1e-04
Identities = 49/171 (28%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 91 RALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSA 150
R+L G CR P L + S + C + P SR+ RP A PRP P +A
Sbjct: 80 RSLGGLCRAPDPALPV-SVAVPPCPACRGPQSISRS--------RPRRAVRPRPGPWPAA 130
Query: 151 VRRVDVR----PLPAS---------PARPCPSPGPAAASSPARPPGLQRSKSDLSERFSR 197
R VR P P PA C S + + ARP L+ S +
Sbjct: 131 PSRGPVRSCRGPRPGRALGSLPLVLPAGSCGSCQEDSLGNQARPSALEIGASGVGLGSPA 190
Query: 198 AAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPGSSEGGC 248
+ R+ PE +G A RA SD S P++ P + GGC
Sbjct: 191 PSNRRNRY-----APPESPKGSPSAKPPRACSDTFSARQPASTPKALPGGC 236
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/154 (30%), Positives = 57/154 (37%), Gaps = 29/154 (18%)
Query: 117 PVSPAEASRTPGRAEGAGRPPP-ATPPRP-----------PPSTSAVRRVDVRPLPASPA 164
PVSPA+ + P RPPP A PRP P S + RP P+
Sbjct: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPS 161
Query: 165 RPC-PSPGPAAASSPARPP------GLQRSKSDLSERFSRAAADLERFFNFCGLDPEEAR 217
RP SP P P R G+Q + D++E L R GL P+ R
Sbjct: 162 RPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAE------GGLRRDGRRPGLAPQRGR 215
Query: 218 G---LGVAHLARASSDIVSLAGPSAGPGSSEGGC 248
G L V H A + GPS P G C
Sbjct: 216 GGLLLVVLHAATVQRPRLG-RGPSRPPRGPVGVC 248
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 43.9 bits (102), Expect = 2e-04
Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 114 CDSPVSPAE---ASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
C S VS E + PG G PP PP PPP S P+SP P P P
Sbjct: 6 CVSLVSDKENGNIATAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPP 65
Query: 171 GPAAASSPARPPGL 184
P P PPGL
Sbjct: 66 LPGEPPIPPPPPGL 79
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 43.9 bits (102), Expect = 2e-04
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 66 PVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASR 125
P PLLS+ SPE + P PGPC P+ + + L P
Sbjct: 41 PAPPLLSEA---SPEP---IPEPCPELAPGPC--PEATSESATELY------TEPTPEPA 86
Query: 126 TPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPARPPGL 184
T +E A P PAT P P P+T + P PA+ + P P+P PA S P P L
Sbjct: 87 TEPASEPA--PEPATEPAPEPATEPAP--EPAPEPATESAPEPTPEPALESVPEPAPEL 141
Score = 37.0 bits (84), Expect = 0.021
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 136 PPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPA 179
PPP PP PPP+ + P+P P P P A S A
Sbjct: 31 PPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESA 74
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 12/59 (20%)
Query: 136 PPPATPPRPPPSTSAVRRVDVRPLPASPARPCP------------SPGPAAASSPARPP 182
PPPA PP PP + A P P PCP P P A+ PA P
Sbjct: 35 PPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEP 93
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 10/54 (18%)
Query: 130 AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPARPPG 183
AE PPP PP PPP+ P PA P SP P P PG
Sbjct: 21 AESPEPPPPWPPPPPPPA----------PPPAPPLLSEASPEPIPEPCPELAPG 64
Score = 32.3 bits (72), Expect = 0.51
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 117 PVSPAEASRTPGRAEGAGRPPP------ATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
P PA P +E + P P A P P ++ + + P P P P
Sbjct: 34 PPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEP 93
Query: 171 GPAAASSPARPPGLQRSKSDLSERFSRAAAD 201
P A+ PA P + + E + +A +
Sbjct: 94 APEPATEPAPEPATEPAPEPAPEPATESAPE 124
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 43.9 bits (102), Expect = 2e-04
Identities = 49/175 (28%), Positives = 60/175 (34%), Gaps = 37/175 (21%)
Query: 60 ANTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVS 119
AN+ P PLL ++P P T TP + P P P
Sbjct: 1442 ANSNGTPEPPLLEEKP---PPTPPPAPTPQPQPPPPP-------------------PPPQ 1479
Query: 120 PAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAA--ASS 177
PA S P A PPP PP PPP P PA P+ P P P AA A+
Sbjct: 1480 PALPSPPPLVAPTPSSPPP--PPLPPP-----------PPPAMPSPPPPPPPAAAPLAAP 1526
Query: 178 PARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIV 232
P P +L + A + CG EEA G + R + V
Sbjct: 1527 PEEPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFV 1581
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/211 (27%), Positives = 84/211 (39%), Gaps = 40/211 (18%)
Query: 1 MPVHTLSPGAPSAPALPCRLRTR---VPGYLLRGPADG-GARKPSAVERLEADKAKYVKS 56
+P L P P+ PA+P + + G L ++G G PS +RL+ + + +++
Sbjct: 1317 VPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPSPCKRLDEELKRNLET 1376
Query: 57 L---------HVANTR--QEPVQPLLSK---QPLFSPETRRTVLTPS---RRALPGPCRR 99
L VA R QE + +S PL P+ T P A+PGP
Sbjct: 1377 LPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPL 1436
Query: 100 PQLDLDILSS-----LIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRPP--PSTSAVR 152
P L + L++ P P + P +PPP PP P PS +
Sbjct: 1437 PGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQP-------QPPPPPPPPQPALPSPPPL- 1488
Query: 153 RVDVRPLPAS-PARPCPSPGPAAASSPARPP 182
V P P+S P P P P P A SP PP
Sbjct: 1489 ---VAPTPSSPPPPPLPPPPPPAMPSPPPPP 1516
Score = 39.7 bits (91), Expect = 0.003
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 38/164 (23%)
Query: 32 PADGGARKPSAVERLEADKAKYVKSLHVANTRQEPVQPLLSKQPLFSPETRRTVLTPSRR 91
P DG A+KP R KA+ TR EP++PL K L P+ + T S
Sbjct: 1193 PTDG-AKKPRGRGRGRGRKAE-----EAGGTRLEPLKPL--KIKLSVPKAGEGLGTSSGD 1244
Query: 92 ALPGPC----------------------RRPQLDLDILSSLIDLCDSPVSPAEASRTPGR 129
A+ G ++P++ ++S +D S R P
Sbjct: 1245 AISGTDHNSLDSSLTREKIEAKIKEVEEKQPEMKSGFMASFLDFLKS------GKRHPPL 1298
Query: 130 AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPA 173
+ AG PP +PP+ P + R + +P PA+PA P P P A
Sbjct: 1299 YQ-AGLTPPLSPPKSVPPSVPARGLQPQP-PATPAVPHPPPSGA 1340
Score = 36.6 bits (83), Expect = 0.027
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 117 PVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAAS 176
PV + ++ P A G+ PPP P PP + + +P +P P P
Sbjct: 1673 PVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKP 1732
Query: 177 SPARPPGLQRSKSDLS 192
S RP ++ K ++
Sbjct: 1733 SLLRPVEKEKEKEKVT 1748
Score = 36.2 bits (82), Expect = 0.035
Identities = 38/137 (27%), Positives = 48/137 (35%), Gaps = 13/137 (9%)
Query: 93 LPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVR 152
LP P PQL +LS S P +GA +PPP PP PPP +
Sbjct: 794 LPPP--PPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPPPMPLQL- 850
Query: 153 RVDVRPLPASPARPCPSPGPAAASSPARPPGLQRSKSDLSERFSRAAADLERFFNFCGLD 212
+R PA P P P + PPG + E A D G+
Sbjct: 851 EAHLRSHGLEPAAPSPRLRPEESLD---PPGAMQELLGALEPLPPAPGD-------TGVG 900
Query: 213 PEEARGLGVAHLARASS 229
P + G A R+ S
Sbjct: 901 PPNSEGKDPAGAYRSPS 917
Score = 34.3 bits (77), Expect = 0.13
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 127 PGRAEGAGRPPPA---TPPRPPPSTSAVRRVDVRPLPASP--ARPCPSPGPAAASSPARP 181
PGRA GAG P P +PP S V + + + P A P P P P +PA
Sbjct: 995 PGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPASE 1054
Query: 182 P 182
P
Sbjct: 1055 P 1055
Score = 28.5 bits (62), Expect = 7.4
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 111 IDLCD---SPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPC 167
ID C P P R P +A+ G P P PR +RPL
Sbjct: 1140 IDFCPPNPGPDGPRRRGRKPTKAKRDGPPRPRGRPR------------IRPLEVP----- 1182
Query: 168 PSPGPAAASSPA----RPPGLQRSKSDLSE 193
+ GPA+AS+P +P G R + +E
Sbjct: 1183 TTAGPASASTPTDGAKKPRGRGRGRGRKAE 1212
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 43.5 bits (101), Expect = 2e-04
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 25/191 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA +KP+ E
Sbjct: 403 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----------AP 452
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P +K+P + TP A P + + L+ +P +P
Sbjct: 453 TTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP 511
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPS----PGPAA 174
E + T P P TP P P+T +A P P +P P P+ P P
Sbjct: 512 EELAPTTPE-----EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 566
Query: 175 --ASSPARPPG 183
++P P G
Sbjct: 567 PKETAPTTPKG 577
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 46/183 (25%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P T AP+ P P T+ + PA ++P+
Sbjct: 232 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT------------------ 273
Query: 62 TRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPA 121
T +EP P +K+P +P T ++ T + P ++P +P +P
Sbjct: 274 TPKEPA-PTTTKEP--APTTTKSAPTTPKEPAPTTPKKP---------------APTTPK 315
Query: 122 EASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVR-PLPASPARPCPS----PGPAAAS 176
E + T + P P TP P P+T + P P +P +P P+ P P
Sbjct: 316 EPAPTTPK-----EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 370
Query: 177 SPA 179
PA
Sbjct: 371 EPA 373
Score = 38.5 bits (88), Expect = 0.007
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 29/183 (15%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA ++P+ K+ A
Sbjct: 247 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPT----TTKSAPTTPKEPA 302
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T + P K+P + T TP P P + +P +P
Sbjct: 303 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKE---PAPTTKEP--------------APTTP 345
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPSPGPAAASSP 178
E + T + +P P TP P P+T P P +P P P+ +A ++
Sbjct: 346 KEPAPTAPK-----KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTT 400
Query: 179 ARP 181
P
Sbjct: 401 KEP 403
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 17/180 (9%)
Query: 10 APSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEA------DKAKYVKSLHVANTR 63
AP+ P P + P + PA ++P+ + + A T
Sbjct: 318 APTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 377
Query: 64 QEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEA 123
+EP P K+P +P T ++ T ++ P + S +P +P E
Sbjct: 378 KEP-SPTTPKEP--APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 434
Query: 124 SRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCP-SPGPAAASSPAR 180
+ T + +P P TP P P+T +P P +P P P +P A ++P +
Sbjct: 435 APTTPK-----KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 489
Score = 35.0 bits (79), Expect = 0.079
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 116 SPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPA----SPARPCP--- 168
+P +P E + T + +P P TP PPP+TS V P SP P
Sbjct: 693 APTTPKEPAPTTPK-----KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 747
Query: 169 -SPGPAAASSPARPPGLQRSKS 189
P P A + + PG+ +K+
Sbjct: 748 AEPTPKALENSPKEPGVPTTKT 769
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/184 (22%), Positives = 60/184 (32%), Gaps = 24/184 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P + P + PA ++P+ E A
Sbjct: 286 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP-----------A 334
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P K+P + + TP A P S +P +
Sbjct: 335 PTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 393
Query: 121 AEASRTPGR-AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPS----PGPAAA 175
A T A + P TP P P+T+ P P +P P P+ P P
Sbjct: 394 KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK------EPAPTTPKEPAPTTPKKPAPTTP 447
Query: 176 SSPA 179
PA
Sbjct: 448 KEPA 451
Score = 32.3 bits (72), Expect = 0.51
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 22/153 (14%)
Query: 51 AKYVKSLHVANTRQ-EPVQPLLSKQ-PLFSPETRRTVLTPSRRALPGPCRRPQLDLDILS 108
AK +S+ + + P +L+K P T+ LT + P + P
Sbjct: 173 AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEP 232
Query: 109 SLIDLCDSPVSPAEASRTPGRAEGAG----------RPPPATPPRPPPSTS--------- 149
+ + +P +P E + T ++ P P TP P P+T+
Sbjct: 233 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 292
Query: 150 AVRRVDVRPLPASPARPCP-SPGPAAASSPARP 181
+ P P +P +P P +P A ++P P
Sbjct: 293 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 325
Score = 29.6 bits (65), Expect = 3.3
Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 7/122 (5%)
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NT +EP P K+P + TP A P L + +P
Sbjct: 541 NTPKEPA-PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 599
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
A + + +P P TP P+T P P +P P P+ A + +
Sbjct: 600 APTTTKEPTSTTCDKPAPTTPKGTAPTTPK------EPAPTTPKEPAPTTPKGTAPTTLK 653
Query: 181 PP 182
P
Sbjct: 654 EP 655
Score = 29.6 bits (65), Expect = 3.3
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 18/72 (25%)
Query: 116 SPVSPAEASRTPGRAEG-----AGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
+P PA P +G + +P P TP P+T P P +P +P P
Sbjct: 659 TPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK------EPAPTTPKKPAP-- 710
Query: 171 GPAAASSPARPP 182
++P PP
Sbjct: 711 -----TTPETPP 717
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 43.5 bits (101), Expect = 2e-04
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 25/191 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA +KP+ E
Sbjct: 444 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----------AP 493
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P +K+P + TP A P + + L+ +P +P
Sbjct: 494 TTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP 552
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPS----PGPAA 174
E + T P P TP P P+T +A P P +P P P+ P P
Sbjct: 553 EELAPTTPE-----EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 607
Query: 175 --ASSPARPPG 183
++P P G
Sbjct: 608 PKETAPTTPKG 618
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 46/183 (25%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P T AP+ P P T+ + PA ++P+
Sbjct: 273 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT------------------ 314
Query: 62 TRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPA 121
T +EP P +K+P +P T ++ T + P ++P +P +P
Sbjct: 315 TPKEPA-PTTTKEP--APTTTKSAPTTPKEPAPTTPKKP---------------APTTPK 356
Query: 122 EASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVR-PLPASPARPCPS----PGPAAAS 176
E + T + P P TP P P+T + P P +P +P P+ P P
Sbjct: 357 EPAPTTPK-----EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 411
Query: 177 SPA 179
PA
Sbjct: 412 EPA 414
Score = 38.5 bits (88), Expect = 0.007
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 29/183 (15%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA ++P+ K+ A
Sbjct: 288 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPT----TTKSAPTTPKEPA 343
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T + P K+P + T TP P P + +P +P
Sbjct: 344 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKE---PAPTTKEP--------------APTTP 386
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPSPGPAAASSP 178
E + T + +P P TP P P+T P P +P P P+ +A ++
Sbjct: 387 KEPAPTAPK-----KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTT 441
Query: 179 ARP 181
P
Sbjct: 442 KEP 444
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 17/180 (9%)
Query: 10 APSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEA------DKAKYVKSLHVANTR 63
AP+ P P + P + PA ++P+ + + A T
Sbjct: 359 APTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 418
Query: 64 QEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEA 123
+EP P K+P +P T ++ T ++ P + S +P +P E
Sbjct: 419 KEP-SPTTPKEP--APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 475
Query: 124 SRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCP-SPGPAAASSPAR 180
+ T + +P P TP P P+T +P P +P P P +P A ++P +
Sbjct: 476 APTTPK-----KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 530
Score = 35.0 bits (79), Expect = 0.079
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 116 SPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPA----SPARPCP--- 168
+P +P E + T + +P P TP PPP+TS V P SP P
Sbjct: 734 APTTPKEPAPTTPK-----KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 788
Query: 169 -SPGPAAASSPARPPGLQRSKS 189
P P A + + PG+ +K+
Sbjct: 789 AEPTPKALENSPKEPGVPTTKT 810
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/184 (22%), Positives = 60/184 (32%), Gaps = 24/184 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P + P + PA ++P+ E A
Sbjct: 327 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP-----------A 375
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P K+P + + TP A P S +P +
Sbjct: 376 PTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 434
Query: 121 AEASRTPGR-AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPS----PGPAAA 175
A T A + P TP P P+T+ P P +P P P+ P P
Sbjct: 435 KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK------EPAPTTPKEPAPTTPKKPAPTTP 488
Query: 176 SSPA 179
PA
Sbjct: 489 KEPA 492
Score = 32.3 bits (72), Expect = 0.51
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 22/153 (14%)
Query: 51 AKYVKSLHVANTRQ-EPVQPLLSKQ-PLFSPETRRTVLTPSRRALPGPCRRPQLDLDILS 108
AK +S+ + + P +L+K P T+ LT + P + P
Sbjct: 214 AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEP 273
Query: 109 SLIDLCDSPVSPAEASRTPGRAEGAG----------RPPPATPPRPPPSTS--------- 149
+ + +P +P E + T ++ P P TP P P+T+
Sbjct: 274 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 333
Query: 150 AVRRVDVRPLPASPARPCP-SPGPAAASSPARP 181
+ P P +P +P P +P A ++P P
Sbjct: 334 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Score = 29.6 bits (65), Expect = 3.3
Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 7/122 (5%)
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NT +EP P K+P + TP A P L + +P
Sbjct: 582 NTPKEPA-PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 640
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
A + + +P P TP P+T P P +P P P+ A + +
Sbjct: 641 APTTTKEPTSTTCDKPAPTTPKGTAPTTPK------EPAPTTPKEPAPTTPKGTAPTTLK 694
Query: 181 PP 182
P
Sbjct: 695 EP 696
Score = 29.6 bits (65), Expect = 3.3
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 18/72 (25%)
Query: 116 SPVSPAEASRTPGRAEG-----AGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
+P PA P +G + +P P TP P+T P P +P +P P
Sbjct: 700 TPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK------EPAPTTPKKPAP-- 751
Query: 171 GPAAASSPARPP 182
++P PP
Sbjct: 752 -----TTPETPP 758
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 43.5 bits (101), Expect = 2e-04
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 25/191 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA +KP+ E
Sbjct: 496 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----------AP 545
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P +K+P + TP A P + + L+ +P +P
Sbjct: 546 TTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP 604
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPS----PGPAA 174
E + T P P TP P P+T +A P P +P P P+ P P
Sbjct: 605 EELAPTTPE-----EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 659
Query: 175 --ASSPARPPG 183
++P P G
Sbjct: 660 PKETAPTTPKG 670
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 46/183 (25%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P T AP+ P P T+ + PA ++P+
Sbjct: 325 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT------------------ 366
Query: 62 TRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPA 121
T +EP P +K+P +P T ++ T + P ++P +P +P
Sbjct: 367 TPKEPA-PTTTKEP--APTTTKSAPTTPKEPAPTTPKKP---------------APTTPK 408
Query: 122 EASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVR-PLPASPARPCPS----PGPAAAS 176
E + T + P P TP P P+T + P P +P +P P+ P P
Sbjct: 409 EPAPTTPK-----EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 463
Query: 177 SPA 179
PA
Sbjct: 464 EPA 466
Score = 38.5 bits (88), Expect = 0.007
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 29/183 (15%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA ++P+ K+ A
Sbjct: 340 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPT----TTKSAPTTPKEPA 395
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T + P K+P + T TP P P + +P +P
Sbjct: 396 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKE---PAPTTKEP--------------APTTP 438
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPSPGPAAASSP 178
E + T + +P P TP P P+T P P +P P P+ +A ++
Sbjct: 439 KEPAPTAPK-----KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTT 493
Query: 179 ARP 181
P
Sbjct: 494 KEP 496
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 17/180 (9%)
Query: 10 APSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEA------DKAKYVKSLHVANTR 63
AP+ P P + P + PA ++P+ + + A T
Sbjct: 411 APTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 470
Query: 64 QEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEA 123
+EP P K+P +P T ++ T ++ P + S +P +P E
Sbjct: 471 KEP-SPTTPKEP--APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 527
Query: 124 SRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCP-SPGPAAASSPAR 180
+ T + +P P TP P P+T +P P +P P P +P A ++P +
Sbjct: 528 APTTPK-----KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 582
Score = 35.0 bits (79), Expect = 0.079
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 116 SPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPA----SPARPCP--- 168
+P +P E + T + +P P TP PPP+TS V P SP P
Sbjct: 786 APTTPKEPAPTTPK-----KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 840
Query: 169 -SPGPAAASSPARPPGLQRSKS 189
P P A + + PG+ +K+
Sbjct: 841 AEPTPKALENSPKEPGVPTTKT 862
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/184 (22%), Positives = 60/184 (32%), Gaps = 24/184 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P + P + PA ++P+ E A
Sbjct: 379 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP-----------A 427
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P K+P + + TP A P S +P +
Sbjct: 428 PTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 486
Query: 121 AEASRTPGR-AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPS----PGPAAA 175
A T A + P TP P P+T+ P P +P P P+ P P
Sbjct: 487 KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK------EPAPTTPKEPAPTTPKKPAPTTP 540
Query: 176 SSPA 179
PA
Sbjct: 541 KEPA 544
Score = 32.3 bits (72), Expect = 0.51
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 22/153 (14%)
Query: 51 AKYVKSLHVANTRQ-EPVQPLLSKQ-PLFSPETRRTVLTPSRRALPGPCRRPQLDLDILS 108
AK +S+ + + P +L+K P T+ LT + P + P
Sbjct: 266 AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEP 325
Query: 109 SLIDLCDSPVSPAEASRTPGRAEGAG----------RPPPATPPRPPPSTS--------- 149
+ + +P +P E + T ++ P P TP P P+T+
Sbjct: 326 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 385
Query: 150 AVRRVDVRPLPASPARPCP-SPGPAAASSPARP 181
+ P P +P +P P +P A ++P P
Sbjct: 386 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Score = 29.6 bits (65), Expect = 3.3
Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 7/122 (5%)
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NT +EP P K+P + TP A P L + +P
Sbjct: 634 NTPKEPA-PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 692
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
A + + +P P TP P+T P P +P P P+ A + +
Sbjct: 693 APTTTKEPTSTTCDKPAPTTPKGTAPTTPK------EPAPTTPKEPAPTTPKGTAPTTLK 746
Query: 181 PP 182
P
Sbjct: 747 EP 748
Score = 29.6 bits (65), Expect = 3.3
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 18/72 (25%)
Query: 116 SPVSPAEASRTPGRAEG-----AGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
+P PA P +G + +P P TP P+T P P +P +P P
Sbjct: 752 TPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK------EPAPTTPKKPAP-- 803
Query: 171 GPAAASSPARPP 182
++P PP
Sbjct: 804 -----TTPETPP 810
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 43.5 bits (101), Expect = 2e-04
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 25/191 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA +KP+ E
Sbjct: 537 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----------AP 586
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P +K+P + TP A P + + L+ +P +P
Sbjct: 587 TTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP 645
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPS----PGPAA 174
E + T P P TP P P+T +A P P +P P P+ P P
Sbjct: 646 EELAPTTPE-----EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 700
Query: 175 --ASSPARPPG 183
++P P G
Sbjct: 701 PKETAPTTPKG 711
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 46/183 (25%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVAN 61
P T AP+ P P T+ + PA ++P+
Sbjct: 366 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT------------------ 407
Query: 62 TRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPA 121
T +EP P +K+P +P T ++ T + P ++P +P +P
Sbjct: 408 TPKEPA-PTTTKEP--APTTTKSAPTTPKEPAPTTPKKP---------------APTTPK 449
Query: 122 EASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVR-PLPASPARPCPS----PGPAAAS 176
E + T + P P TP P P+T + P P +P +P P+ P P
Sbjct: 450 EPAPTTPK-----EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 504
Query: 177 SPA 179
PA
Sbjct: 505 EPA 507
Score = 38.5 bits (88), Expect = 0.007
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 29/183 (15%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P T+ P + PA ++P+ K+ A
Sbjct: 381 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPT----TTKSAPTTPKEPA 436
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T + P K+P + T TP P P + +P +P
Sbjct: 437 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKE---PAPTTKEP--------------APTTP 479
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCPSPGPAAASSP 178
E + T + +P P TP P P+T P P +P P P+ +A ++
Sbjct: 480 KEPAPTAPK-----KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTT 534
Query: 179 ARP 181
P
Sbjct: 535 KEP 537
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 17/180 (9%)
Query: 10 APSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEA------DKAKYVKSLHVANTR 63
AP+ P P + P + PA ++P+ + + A T
Sbjct: 452 APTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 511
Query: 64 QEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSPAEA 123
+EP P K+P +P T ++ T ++ P + S +P +P E
Sbjct: 512 KEP-SPTTPKEP--APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 568
Query: 124 SRTPGRAEGAGRPPPATPPRPPPST--SAVRRVDVRPLPASPARPCP-SPGPAAASSPAR 180
+ T + +P P TP P P+T +P P +P P P +P A ++P +
Sbjct: 569 APTTPK-----KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 623
Score = 35.0 bits (79), Expect = 0.079
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 116 SPVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPA----SPARPCP--- 168
+P +P E + T + +P P TP PPP+TS V P SP P
Sbjct: 827 APTTPKEPAPTTPK-----KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 881
Query: 169 -SPGPAAASSPARPPGLQRSKS 189
P P A + + PG+ +K+
Sbjct: 882 AEPTPKALENSPKEPGVPTTKT 903
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/184 (22%), Positives = 60/184 (32%), Gaps = 24/184 (13%)
Query: 2 PVHTLSPGAPSAPALPCRLRTRVPGYLL-RGPADGGARKPSAVERLEADKAKYVKSLHVA 60
P T + AP+ P P + P + PA ++P+ E A
Sbjct: 420 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP-----------A 468
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
T +EP P K+P + + TP A P S +P +
Sbjct: 469 PTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 527
Query: 121 AEASRTPGR-AEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPS----PGPAAA 175
A T A + P TP P P+T+ P P +P P P+ P P
Sbjct: 528 KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK------EPAPTTPKEPAPTTPKKPAPTTP 581
Query: 176 SSPA 179
PA
Sbjct: 582 KEPA 585
Score = 32.3 bits (72), Expect = 0.51
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 22/153 (14%)
Query: 51 AKYVKSLHVANTRQ-EPVQPLLSKQ-PLFSPETRRTVLTPSRRALPGPCRRPQLDLDILS 108
AK +S+ + + P +L+K P T+ LT + P + P
Sbjct: 307 AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEP 366
Query: 109 SLIDLCDSPVSPAEASRTPGRAEGAG----------RPPPATPPRPPPSTS--------- 149
+ + +P +P E + T ++ P P TP P P+T+
Sbjct: 367 TPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK 426
Query: 150 AVRRVDVRPLPASPARPCP-SPGPAAASSPARP 181
+ P P +P +P P +P A ++P P
Sbjct: 427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Score = 29.6 bits (65), Expect = 3.3
Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 7/122 (5%)
Query: 61 NTRQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
NT +EP P K+P + TP A P L + +P
Sbjct: 675 NTPKEPA-PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 733
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASSPAR 180
A + + +P P TP P+T P P +P P P+ A + +
Sbjct: 734 APTTTKEPTSTTCDKPAPTTPKGTAPTTPK------EPAPTTPKEPAPTTPKGTAPTTLK 787
Query: 181 PP 182
P
Sbjct: 788 EP 789
Score = 29.6 bits (65), Expect = 3.3
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 18/72 (25%)
Query: 116 SPVSPAEASRTPGRAEG-----AGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSP 170
+P PA P +G + +P P TP P+T P P +P +P P
Sbjct: 793 TPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK------EPAPTTPKKPAP-- 844
Query: 171 GPAAASSPARPP 182
++P PP
Sbjct: 845 -----TTPETPP 851
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 43.5 bits (101), Expect = 2e-04
Identities = 42/130 (32%), Positives = 52/130 (40%), Gaps = 12/130 (9%)
Query: 128 GRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCP--SPGPAAASSPARPPGLQ 185
G + P P PP P + RR + P SPARP P SP P+ A+ P PP
Sbjct: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPP--- 59
Query: 186 RSKSDLSERF--SRAAADLERFFNFCGLDPEEARGL--GVAHLARASSDIVSLAGPSAGP 241
S + S R RA CG P A L G+ RA+ VS A AG
Sbjct: 60 -SHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRA--LAGT 116
Query: 242 GSSEGGCSRR 251
++ G R
Sbjct: 117 VAAAAGLGAR 126
Score = 31.6 bits (70), Expect = 0.87
Identities = 48/169 (28%), Positives = 61/169 (36%), Gaps = 30/169 (17%)
Query: 91 RALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRP------ 144
RA P P P DL P +P + G RP P+ P P
Sbjct: 8 RAAPSPILPPPPDL------------PPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGP 55
Query: 145 --PPS--TSAVRRVDVRPLPASPARPCPSPGPAAASSPARPPGLQRSKSDLSERFSRAAA 200
PPS +++ R R PA P PS G ++ A GL R++ SRA A
Sbjct: 56 FLPPSHASTSSRSPPPRARRTEPAVP-PSCGSGPGAAGALRMGLGRTQRAARVAVSRALA 114
Query: 201 DLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPGSSEGGCS 249
GL AR L HL R + +AG G + GCS
Sbjct: 115 G--TVAAAAGLGARRARRL---HL-RGQIGVRRVAGTPEARGRGD-GCS 156
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 43.5 bits (101), Expect = 2e-04
Identities = 42/130 (32%), Positives = 52/130 (40%), Gaps = 12/130 (9%)
Query: 128 GRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCP--SPGPAAASSPARPPGLQ 185
G + P P PP P + RR + P SPARP P SP P+ A+ P PP
Sbjct: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPP--- 59
Query: 186 RSKSDLSERF--SRAAADLERFFNFCGLDPEEARGL--GVAHLARASSDIVSLAGPSAGP 241
S + S R RA CG P A L G+ RA+ VS A AG
Sbjct: 60 -SHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRA--LAGT 116
Query: 242 GSSEGGCSRR 251
++ G R
Sbjct: 117 VAAAAGLGAR 126
Score = 31.6 bits (70), Expect = 0.87
Identities = 48/169 (28%), Positives = 61/169 (36%), Gaps = 30/169 (17%)
Query: 91 RALPGPCRRPQLDLDILSSLIDLCDSPVSPAEASRTPGRAEGAGRPPPATPPRP------ 144
RA P P P DL P +P + G RP P+ P P
Sbjct: 8 RAAPSPILPPPPDL------------PPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGP 55
Query: 145 --PPS--TSAVRRVDVRPLPASPARPCPSPGPAAASSPARPPGLQRSKSDLSERFSRAAA 200
PPS +++ R R PA P PS G ++ A GL R++ SRA A
Sbjct: 56 FLPPSHASTSSRSPPPRARRTEPAVP-PSCGSGPGAAGALRMGLGRTQRAARVAVSRALA 114
Query: 201 DLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPGSSEGGCS 249
GL AR L HL R + +AG G + GCS
Sbjct: 115 G--TVAAAAGLGARRARRL---HL-RGQIGVRRVAGTPEARGRGD-GCS 156
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 26/200 (13%)
Query: 4 HTLSPGAPSAPALPCRLR-TRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANT 62
H G P LP +L + +L G R P + K K T
Sbjct: 311 HMAVGGPAQTPLLPAKLSASNALDPMLPASVGGSTRTPRPAAAQPSQKITATKIPKSLPT 370
Query: 63 RQEPVQPLLSKQPLFSPE-TRRTVLTP-SRRALPGPCRRPQLDLDILSSLIDLCDSPVSP 120
+ P P S P+ SP T++T + ++ ALP + P + + + + P+
Sbjct: 371 K--PSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEKPIQ- 427
Query: 121 AEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDV-------------RPLPASPARPC 167
R PG PPP+T P PP ++S+ + + +P A +
Sbjct: 428 ----RNPGMPRP---PPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHK 480
Query: 168 PSPGPAAASSPARPPGLQRS 187
P P A +SSPA PG RS
Sbjct: 481 PPPFTALSSSPAPTPGSTRS 500
Score = 30.0 bits (66), Expect = 2.5
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 117 PVSPAEASRTPGRAEGAGRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAAS 176
P + +S P PPAT P TS R P P S P + AS
Sbjct: 483 PFTALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEAS 542
Query: 177 SPARPPGLQRSKSDLSERFSRAAADL 202
A P R L R +AA D+
Sbjct: 543 KKAGPKSSPRKPVPL--RPGKAARDV 566
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,869,795
Number of Sequences: 37866
Number of extensions: 1073633
Number of successful extensions: 18550
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 1423
Number of HSP's that attempted gapping in prelim test: 8812
Number of HSP's gapped (non-prelim): 7219
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.