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Search of human proteins with 239749167
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo
sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo ... 825 0.0
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens] 402 e-112
gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo ... 260 2e-69
gi|239508911 PREDICTED: hypothetical protein [Homo sapiens] 260 2e-69
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|38683851 round spermatid basic protein 1 [Homo sapiens] 39 0.006
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 37 0.024
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 37 0.024
gi|118498339 EMI domain containing 2 [Homo sapiens] 37 0.031
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 36 0.070
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 35 0.092
gi|239753956 PREDICTED: hypothetical protein [Homo sapiens] 35 0.12
gi|239748498 PREDICTED: hypothetical protein XP_002346677 [Homo ... 35 0.12
gi|19923084 polycystin-1L1 [Homo sapiens] 34 0.20
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 33 0.35
gi|24308227 zinc finger protein 687 [Homo sapiens] 33 0.59
gi|32483397 dopamine receptor D4 [Homo sapiens] 32 0.78
gi|22538470 eomesodermin [Homo sapiens] 32 0.78
gi|239757099 PREDICTED: hypothetical protein [Homo sapiens] 32 0.78
gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo ... 32 0.78
gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo ... 32 0.78
gi|239742460 PREDICTED: hypothetical protein XP_002342521 [Homo ... 32 0.78
gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ... 32 0.78
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 32 1.0
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 32 1.0
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 32 1.0
>gi|239749167 PREDICTED: hypothetical protein XP_002346933 [Homo
sapiens]
Length = 399
Score = 825 bits (2132), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQELPPTRLLLWVPQQHGDHTGEELFAPL 180
SALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQELPPTRLLLWVPQQHGDHTGEELFAPL
Sbjct: 121 SALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQELPPTRLLLWVPQQHGDHTGEELFAPL 180
Query: 181 LRRRPPAFRLGRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRG 240
LRRRPPAFRLGRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRG
Sbjct: 181 LRRRPPAFRLGRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRG 240
Query: 241 AACALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVG 300
AACALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVG
Sbjct: 241 AACALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVG 300
Query: 301 GPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRAEQAARAAPETRVLRVCVRVRVWAGRDPR 360
GPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRAEQAARAAPETRVLRVCVRVRVWAGRDPR
Sbjct: 301 GPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRAEQAARAAPETRVLRVCVRVRVWAGRDPR 360
Query: 361 DLQARGQTCQRAGHGCRRRNRLVPAPRSAGNSSWPAGPH 399
DLQARGQTCQRAGHGCRRRNRLVPAPRSAGNSSWPAGPH
Sbjct: 361 DLQARGQTCQRAGHGCRRRNRLVPAPRSAGNSSWPAGPH 399
>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 551
Score = 402 bits (1032), Expect = e-112
Identities = 213/280 (76%), Positives = 224/280 (80%), Gaps = 23/280 (8%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVP+LLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPNLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQELPPTRLLLWVPQQHGDHTGEELFAPL 180
SALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQE+PPTRLLLWVPQQHGDHTGEELFAPL
Sbjct: 121 SALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQEVPPTRLLLWVPQQHGDHTGEELFAPL 180
Query: 181 LRRRPPAFRLGRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRG 240
LRRRPPAFRLGRQS+ Q + S C P L + PS G+ G ++ RG
Sbjct: 181 LRRRPPAFRLGRQSRQQPLE-------SSHC----------PDLPYHPSPGSSG-QQDRG 222
Query: 241 AACALSV-----ALSGGPRQRRALSLVWRRGQGRQGPEPP 275
A V LS R + L V + G G + P
Sbjct: 223 LPPAAPVFPGETCLSVYCRTKATLKPVDQLGPGSNNVQWP 262
Score = 283 bits (723), Expect = 3e-76
Identities = 145/187 (77%), Positives = 150/187 (80%), Gaps = 4/187 (2%)
Query: 214 WGDLFGTGPGLGFAPSSGT-RGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGRQGP 272
W G G G GT RG + GA +++ + PR QGRQGP
Sbjct: 368 WDAGRGAAAGRGLCALGGTKRGSQAATGAQPSVATWRAVLPRTPPPSP---PGSQGRQGP 424
Query: 273 EPPSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRA 332
EPPSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRA
Sbjct: 425 EPPSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRA 484
Query: 333 EQAARAAPETRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRRRNRLVPAPRSAGNS 392
EQAARAAPETRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRRRNRLVPAPRSAGNS
Sbjct: 485 EQAARAAPETRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRRRNRLVPAPRSAGNS 544
Query: 393 SWPAGPH 399
SWPAGPH
Sbjct: 545 SWPAGPH 551
>gi|239743236 PREDICTED: hypothetical protein XP_002342810 [Homo
sapiens]
Length = 140
Score = 260 bits (664), Expect = 2e-69
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPT 125
SALPT
Sbjct: 121 SALPT 125
>gi|239508911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 260 bits (664), Expect = 2e-69
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG
Sbjct: 1 MQQRWGYRRGWEPGLGVFRKEEIRTQEGAGVQGARAAVPSLLTCRRLCPERWVMAEEAGG 60
Query: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM
Sbjct: 61 TSGPRVPLLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIM 120
Query: 121 SALPT 125
SALPT
Sbjct: 121 SALPT 125
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 40.0 bits (92), Expect = 0.004
Identities = 71/274 (25%), Positives = 99/274 (36%), Gaps = 39/274 (14%)
Query: 30 GVQGARAAVPSLLTCRRLCPERWVMAEEAGG---TSGPRVPLLKRESTTGL-KLGGSGKF 85
G + RAA P L C P A+ GG S R PL + +++ G + SG
Sbjct: 107 GRRSRRAAGPGL-DCAGSAPAP-SGAQSCGGPAPASALRRPLTQWDASGGGGRASHSGPR 164
Query: 86 EGMGGCGRRELV---KKSEMSM------KSSRLGCSGVRSGWIMSALPT--RQLQGRRAG 134
G G GR +K+ +S+ K S C G+ S W S P R L R G
Sbjct: 165 AGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGG 224
Query: 135 LSHGEESVRDVGQKAIEVQELPPTRLLLWV----PQQHGDHTGEELFAPLLRRR------ 184
+ VR ++A LPP+ +L + HG + AP
Sbjct: 225 AAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGARTLP 284
Query: 185 -PPAFRLGRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRGAAC 243
P R G+ + + P + G L G+G G G S GT + +RG+
Sbjct: 285 TPSRARPGKPAPRGSAP-PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRA 343
Query: 244 ALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSP 277
V + G R LS P P SP
Sbjct: 344 PRPVGVLRGVPHFRPLS----------SPAPQSP 367
>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 39.7 bits (91), Expect = 0.005
Identities = 45/128 (35%), Positives = 50/128 (39%), Gaps = 22/128 (17%)
Query: 267 QGRQGPEPPSPVGQ----AQALEEACECGVDTARPEVGGPHGPLLVAP---PGQRVAVRR 319
+G GP P+ G A A EE + G A P PHGP PG R RR
Sbjct: 277 RGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRR 336
Query: 320 RHHEVTAVDDLRAE-QAARAAPETRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRR 378
R HE A R E AA AAP R AGR AR + + HG R
Sbjct: 337 RSHEGRARGRHRVEADAADAAPTAAARR--------AGR------ARPRGRRHREHGTRS 382
Query: 379 RNRLVPAP 386
R V AP
Sbjct: 383 DARAVAAP 390
>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 39.7 bits (91), Expect = 0.005
Identities = 45/128 (35%), Positives = 50/128 (39%), Gaps = 22/128 (17%)
Query: 267 QGRQGPEPPSPVGQ----AQALEEACECGVDTARPEVGGPHGPLLVAP---PGQRVAVRR 319
+G GP P+ G A A EE + G A P PHGP PG R RR
Sbjct: 277 RGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRR 336
Query: 320 RHHEVTAVDDLRAE-QAARAAPETRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRR 378
R HE A R E AA AAP R AGR AR + + HG R
Sbjct: 337 RSHEGRARGRHRVEADAADAAPTAAARR--------AGR------ARPRGRRHREHGTRS 382
Query: 379 RNRLVPAP 386
R V AP
Sbjct: 383 DARAVAAP 390
>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 39.7 bits (91), Expect = 0.005
Identities = 45/128 (35%), Positives = 50/128 (39%), Gaps = 22/128 (17%)
Query: 267 QGRQGPEPPSPVGQ----AQALEEACECGVDTARPEVGGPHGPLLVAP---PGQRVAVRR 319
+G GP P+ G A A EE + G A P PHGP PG R RR
Sbjct: 277 RGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRR 336
Query: 320 RHHEVTAVDDLRAE-QAARAAPETRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRR 378
R HE A R E AA AAP R AGR AR + + HG R
Sbjct: 337 RSHEGRARGRHRVEADAADAAPTAAARR--------AGR------ARPRGRRHREHGTRS 382
Query: 379 RNRLVPAP 386
R V AP
Sbjct: 383 DARAVAAP 390
>gi|38683851 round spermatid basic protein 1 [Homo sapiens]
Length = 802
Score = 39.3 bits (90), Expect = 0.006
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 19/90 (21%)
Query: 222 PGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSPVGQA 281
P G +P RGV+RQR ++ S G P Q L+ RR + RQ P P P
Sbjct: 76 PHAGVSP----RGVKRQRRSSSGGSQEKRGRPSQEPPLAPPHRRRRSRQHPGPLPPT--- 128
Query: 282 QALEEACECGVDTARPEVGGPHGPLLVAPP 311
A P V GP PLL+ PP
Sbjct: 129 ------------NAAPTVPGPVEPLLLPPP 146
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 37.4 bits (85), Expect = 0.024
Identities = 75/294 (25%), Positives = 102/294 (34%), Gaps = 44/294 (14%)
Query: 30 GVQGARAAVPSLLTCRRLCPERWVMAEEAGG---TSGPRVPLLKRESTTGLKLGG-SGKF 85
G + RAA P L C P A+ GG S R PL + +++ G G SG
Sbjct: 107 GRRSRRAAGPGL-DCAGSAPAP-SGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPR 164
Query: 86 EGMGGCGRRELV---KKSEMSM------KSSRLGCSGVRSGWIMSALPT--RQLQGRRAG 134
G G GR +K+ +S+ K S C G+ S W S P R L R G
Sbjct: 165 AGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGG 224
Query: 135 LSHGEESVRDVGQKAIEVQELPPTRLLLWV----PQQHGDHTGEELFAPLLRRRPPAFRL 190
+ VR ++A LPP+ +L + HG + AP
Sbjct: 225 AAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPT 284
Query: 191 GRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAP---SSGTRGVERQRGAA-CALS 246
G +S + P + + + P L A G R +GA LS
Sbjct: 285 GERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLS 344
Query: 247 VALSGGPRQRRAL-----SLVWRRGQ--------------GRQGPEPPSPVGQA 281
A PR RAL S +W R + R P P+P G A
Sbjct: 345 TAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSA 398
Score = 30.0 bits (66), Expect = 3.8
Identities = 64/240 (26%), Positives = 82/240 (34%), Gaps = 53/240 (22%)
Query: 50 ERWVMAEEAGGTSGPRV----------PLLKRESTTGLKLGGSGKFEGMGGCGRRELVKK 99
E W AE GG+SG R R S +L G G GG G +LV
Sbjct: 364 ELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGG-----GGSGLTQLVG- 417
Query: 100 SEMSMKSSRLGCSGVRSGWIMSALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQELPPTR 159
SG SG + ++ T L RR G + R VG ++ +P R
Sbjct: 418 ------------SGRGSG-VTHSVGTHALATRR-----GSRAPRPVGV----LRGVPHFR 455
Query: 160 LLLW-VPQQHGDHTGEELFAPLLRRRPPAFRLGRQSQSQTFKIP-FQTPTSGPCVPWGDL 217
L PQ F P L A RL + +P P WG
Sbjct: 456 PLSSPAPQSPPRSPSVRAFGPRLG----AGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQ 511
Query: 218 FGTGPGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSP 277
G G G P +G R +RGA G P + + LSL+ R + E P P
Sbjct: 512 RCEGCGGGSQPFAGRRAERGKRGA---------GVPWRTQTLSLLRRCSGALRELESPFP 562
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 37.4 bits (85), Expect = 0.024
Identities = 75/294 (25%), Positives = 102/294 (34%), Gaps = 44/294 (14%)
Query: 30 GVQGARAAVPSLLTCRRLCPERWVMAEEAGG---TSGPRVPLLKRESTTGLKLGG-SGKF 85
G + RAA P L C P A+ GG S R PL + +++ G G SG
Sbjct: 107 GRRSRRAAGPGL-DCAGSAPAP-SGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPR 164
Query: 86 EGMGGCGRRELV---KKSEMSM------KSSRLGCSGVRSGWIMSALPT--RQLQGRRAG 134
G G GR +K+ +S+ K S C G+ S W S P R L R G
Sbjct: 165 AGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGG 224
Query: 135 LSHGEESVRDVGQKAIEVQELPPTRLLLWV----PQQHGDHTGEELFAPLLRRRPPAFRL 190
+ VR ++A LPP+ +L + HG + AP
Sbjct: 225 AAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPT 284
Query: 191 GRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAP---SSGTRGVERQRGAA-CALS 246
G +S + P + + + P L A G R +GA LS
Sbjct: 285 GERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLS 344
Query: 247 VALSGGPRQRRAL-----SLVWRRGQ--------------GRQGPEPPSPVGQA 281
A PR RAL S +W R + R P P+P G A
Sbjct: 345 TAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSA 398
Score = 30.0 bits (66), Expect = 3.8
Identities = 64/240 (26%), Positives = 82/240 (34%), Gaps = 53/240 (22%)
Query: 50 ERWVMAEEAGGTSGPRV----------PLLKRESTTGLKLGGSGKFEGMGGCGRRELVKK 99
E W AE GG+SG R R S +L G G GG G +LV
Sbjct: 364 ELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGG-----GGSGLTQLVG- 417
Query: 100 SEMSMKSSRLGCSGVRSGWIMSALPTRQLQGRRAGLSHGEESVRDVGQKAIEVQELPPTR 159
SG SG + ++ T L RR G + R VG ++ +P R
Sbjct: 418 ------------SGRGSG-VTHSVGTHALATRR-----GSRAPRPVGV----LRGVPHFR 455
Query: 160 LLLW-VPQQHGDHTGEELFAPLLRRRPPAFRLGRQSQSQTFKIP-FQTPTSGPCVPWGDL 217
L PQ F P L A RL + +P P WG
Sbjct: 456 PLSSPAPQSPPRSPSVRAFGPRLG----AGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQ 511
Query: 218 FGTGPGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSP 277
G G G P +G R +RGA G P + + LSL+ R + E P P
Sbjct: 512 RCEGCGGGSQPFAGRRAERGKRGA---------GVPWRTQTLSLLRRCSGALRELESPFP 562
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 37.0 bits (84), Expect = 0.031
Identities = 40/129 (31%), Positives = 47/129 (36%), Gaps = 22/129 (17%)
Query: 201 IPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALS 260
+P Q +GP P G GP G S G RG ++G A L G P R
Sbjct: 189 VPRQRRPTGPAGPPGQTGPPGPA-GPPGSKGDRGQTGEKGPAGP--PGLLGPPGPRGLPG 245
Query: 261 LVWRRGQ-------GRQGPEPPSPVGQAQALE----------EACECGVDTARPEVGGPH 303
+ R G G GP P SP G +L+ VDT V GP
Sbjct: 246 EMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPR 305
Query: 304 GPLLVAPPG 312
GP PPG
Sbjct: 306 GP--PGPPG 312
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 35.8 bits (81), Expect = 0.070
Identities = 39/144 (27%), Positives = 50/144 (34%), Gaps = 7/144 (4%)
Query: 206 PTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALSLVW-- 263
P P P +L TG G G G G+ G A G R+ L+L W
Sbjct: 837 PHGSPDPPVPELL-TGRGSGKRGRRGGGGLRGINGEARPARGRKPGSRREPGRLALKWGT 895
Query: 264 RRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPG----QRVAVRR 319
R G Q P Q E E G + P GPH L PPG R RR
Sbjct: 896 RGGFNGQMERSPRRTHHWQHNGELAEGGAEPKDPPPPGPHSEDLKVPPGVVRKSRRGRRR 955
Query: 320 RHHEVTAVDDLRAEQAARAAPETR 343
+++ + R + +P R
Sbjct: 956 KYNPTRNSNSSRQDITLEPSPTAR 979
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 35.4 bits (80), Expect = 0.092
Identities = 108/395 (27%), Positives = 142/395 (35%), Gaps = 81/395 (20%)
Query: 9 RGWEPGLGVFRKEEIRTQEGAGV-QGARAAVPSLLTCRRLCPERWVMAEEAGGTSGPRVP 67
RG PG G+F + QE + +GA AA + RL V AG S
Sbjct: 554 RGRAPGRGLFHVALLMRQEAGQLREGAVAAAAA----ERLPAGSPVAVLVAGEPS----- 604
Query: 68 LLKRESTTGLKLGGSGKFEGMGGCGRRELVKKSEMSMKSSRLGCSGVRSGWIMSALPTRQ 127
GL G +GK GG GRR L ++ + RLG G ++
Sbjct: 605 ----HRPEGLAAGQTGKARRGGGGGRRGLRQRGRWLVGLGRLG------GCLLGL----- 649
Query: 128 LQGRRAGLSHGEESVRDVGQKAIEVQELPPTRLLLWVPQQHGDHTGEELFAPLLRR--RP 185
GRR G + ++ Q L LL + H H G LR R
Sbjct: 650 --GRRIGPG---------ARLVLQEQLLAAESLLAAIAAVHQLHRGLRRRQKELRHHGRG 698
Query: 186 PAFRLGRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGL-GFAPSSGTRGVERQRGAACA 244
R GR+ ++ ++P Q V DL G PGL G GTRG GA A
Sbjct: 699 RGRRGGRRGRAVGLEVPLQVG-----VAHEDLAGL-PGLGGRGRGGGTRG---GGGAVRA 749
Query: 245 LSVALSGGPRQRRALSLVWRRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVGGPHG 304
L GG + R +G + Q AL EA P + G H
Sbjct: 750 LVQQQVGGVGEGLGAE---RAAEGPLARVHALVLPQVGALREALPADSTGVGP-LAGVH- 804
Query: 305 PLLVAPPGQRVAVRRRHHEVTAVDDLRAEQAARAAPETRVLRVCVRVRVWAGRDPRDLQA 364
+ VAP RV + + +RA AR R +R R+ R L+A
Sbjct: 805 -VAVAPQAGRV--------LEGLGAVRARMKAR--------RPVCTLRWICSREER-LKA 846
Query: 365 RGQTCQRAGHGCR--RRNRLVPAPRSAGNSSWPAG 397
GQ +GH R RN L +P +S W AG
Sbjct: 847 LGQ----SGHWSRDDHRNDLPHSP----HSYWAAG 873
>gi|239753956 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 35.0 bits (79), Expect = 0.12
Identities = 47/145 (32%), Positives = 56/145 (38%), Gaps = 27/145 (18%)
Query: 228 PSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGR-QGPEPPSPVGQAQALEE 286
P S G R A A S L GPRQ + LS + +G Q P + VG Q
Sbjct: 9 PLSAETGELESRPAHAARSCHL--GPRQDQLLSGAVKPARGGCQSPGKNTGVGDEQRYSP 66
Query: 287 ACECGVDT----------ARPEVGGPHGPLLVAPPGQ-----RVAVRRRHHEVTAVDDLR 331
G DT A PEV PHGP A PG+ R A R E T L
Sbjct: 67 CPRRGGDTGADTCPKVPRAGPEVASPHGP--GAGPGRTNYNSRHARRHDVTERTTPQSLA 124
Query: 332 AEQAARAAPETRVLRVCVRVRVWAG 356
+A R A + +C +R W G
Sbjct: 125 DGEAGRVAED-----LC--LRAWNG 142
>gi|239748498 PREDICTED: hypothetical protein XP_002346677 [Homo
sapiens]
Length = 197
Score = 35.0 bits (79), Expect = 0.12
Identities = 47/145 (32%), Positives = 56/145 (38%), Gaps = 27/145 (18%)
Query: 228 PSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGR-QGPEPPSPVGQAQALEE 286
P S G R A A S L GPRQ + LS + +G Q P + VG Q
Sbjct: 9 PLSAETGELESRPAHAARSCHL--GPRQDQLLSGAVKPARGGCQSPGKNTGVGDEQRYSP 66
Query: 287 ACECGVDT----------ARPEVGGPHGPLLVAPPGQ-----RVAVRRRHHEVTAVDDLR 331
G DT A PEV PHGP A PG+ R A R E T L
Sbjct: 67 CPRRGGDTGADACPKVPGAGPEVASPHGP--GAGPGRTNYNSRHARRHDVTERTTPQSLA 124
Query: 332 AEQAARAAPETRVLRVCVRVRVWAG 356
+A R A + +C +R W G
Sbjct: 125 DGEAGRVAED-----LC--LRAWNG 142
>gi|19923084 polycystin-1L1 [Homo sapiens]
Length = 2849
Score = 34.3 bits (77), Expect = 0.20
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 273 EPPSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRA 332
+PP P E + T PEVGGP P L+ P Q V + T D + +
Sbjct: 2391 KPPRP------FSALIEDSIPTCSPEVGGPENPYLIDPENQNVTLNGPGGCGTREDCVLS 2444
Query: 333 EQAARAAPETRVLRVCVRVRVWAGRDPR 360
R T + R +R +W R R
Sbjct: 2445 LGRTRTEAHTALSR--LRASMWIDRSTR 2470
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 33.5 bits (75), Expect = 0.35
Identities = 31/100 (31%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 219 GTGPGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQGRQGP----EP 274
G G G +P+SG R GA C L PR+R AL L G + GP +P
Sbjct: 58 GVKLGGGPSPASGARPSPHLEGAGCETRPWLGPRPRRRLALHLQVPEGARQLGPRTGAQP 117
Query: 275 PSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPGQR 314
Q GV RP G P P P R
Sbjct: 118 SRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGR 157
>gi|24308227 zinc finger protein 687 [Homo sapiens]
Length = 1237
Score = 32.7 bits (73), Expect = 0.59
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
Query: 191 GRQSQSQTFKIPFQTPTSGPCVPWGDLFGTGPGLGFAPSSGTRGVERQRGAACALSVALS 250
G QS + K+P P G + + PG +PSSG + + A S S
Sbjct: 268 GHQSPLASPKVPVCQPLKEEDDDEGPVDKSSPGSPQSPSSGAEAADEDSNDSPASS---S 324
Query: 251 GGPRQRRALSLVWRRG-------QGRQGPEPPSPVGQAQALEEACECGVDTARPEVGGP 302
P + R ++ G Q P+PP+P+ + L EA + A P GP
Sbjct: 325 SRPLKVRIKTIKTSCGNITRTVTQVPSDPDPPAPLAEGAFLAEASLLKLSPATPTSEGP 383
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 32.3 bits (72), Expect = 0.78
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 257 RALSLVWRRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVGGPHGP 305
R L R + GP PPSP A L + CG D A P G P GP
Sbjct: 226 RRAKLHGRAPRRPSGPGPPSPTPPAPRLPQD-PCGPDCAPPAPGLPRGP 273
>gi|22538470 eomesodermin [Homo sapiens]
Length = 686
Score = 32.3 bits (72), Expect = 0.78
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 13/106 (12%)
Query: 215 GDLFGTGPGLGF-APSSGTRGV-----ERQRGAACALSVALSGGPRQRRALSLVWRRGQG 268
GD F + + P G +G E AA A + A + R ++ +
Sbjct: 86 GDAFASAAAVAKPGPPDGRKGSPCGEEELPSAAAAAAAAAAAAAATARYSMDSLSSERYY 145
Query: 269 RQGPEPPSPVGQAQALEEACECGVDTARPEVGGPHGPLLVAPPGQR 314
Q P P Q E A C + + G PHGP+ AP G R
Sbjct: 146 LQSPGP-------QGSELAAPCSLFPYQAAAGAPHGPVYPAPNGAR 184
>gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 32.3 bits (72), Expect = 0.78
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 183 RRPPAFRLGR-QSQSQTFKIPFQTPTSG--PCVPWGDLFGTGPGLGFAP-----SSGTRG 234
RR PA G +++++ P PT+G P P + P LG + +SG R
Sbjct: 92 RRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRA 151
Query: 235 VERQRGAACALSVALSGGPRQRRALSLV--WRRGQGRQ 270
R GA+ AL L+ GP Q + LV W RG R+
Sbjct: 152 YLRDPGASAALRKVLATGPAQPTSPRLVFAWSRGARRE 189
>gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo
sapiens]
Length = 208
Score = 32.3 bits (72), Expect = 0.78
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 183 RRPPAFRLGR-QSQSQTFKIPFQTPTSG--PCVPWGDLFGTGPGLGFAP-----SSGTRG 234
RR PA G +++++ P PT+G P P + P LG + +SG R
Sbjct: 92 RRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRA 151
Query: 235 VERQRGAACALSVALSGGPRQRRALSLV--WRRGQGRQ 270
R GA+ AL L+ GP Q + LV W RG R+
Sbjct: 152 YLRDPGASAALRQVLATGPAQPTSPRLVSAWSRGARRE 189
>gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo
sapiens]
Length = 208
Score = 32.3 bits (72), Expect = 0.78
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 183 RRPPAFRLGR-QSQSQTFKIPFQTPTSG--PCVPWGDLFGTGPGLGFAP-----SSGTRG 234
RR PA G +++++ P PT+G P P + P LG + +SG R
Sbjct: 92 RRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRA 151
Query: 235 VERQRGAACALSVALSGGPRQRRALSLV--WRRGQGRQ 270
R GA+ AL L+ GP Q + LV W RG R+
Sbjct: 152 YLRDPGASAALRQVLATGPAQPTSPRLVSAWSRGARRE 189
>gi|239742460 PREDICTED: hypothetical protein XP_002342521 [Homo
sapiens]
Length = 195
Score = 32.3 bits (72), Expect = 0.78
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 36/149 (24%)
Query: 235 VERQRGAACALSVALSG-----------GPRQRRALSLVWRRGQGR-QGPEPPSPVGQAQ 282
++R +G CA + L GPRQ + LS + +G Q P + VG Q
Sbjct: 1 MDRSQGQGCAETGELESRPAHAARSCHLGPRQDQLLSGAVKPARGGCQSPGKNTGVGDEQ 60
Query: 283 ALEEACECGVDT----------ARPEVGGPHGPLLVAPPGQ-----RVAVRRRHHEVTAV 327
G DT A PEV PHGP A PG+ R A R E T
Sbjct: 61 RYSPCPRRGGDTGADACPKVPGAGPEVVSPHGP--GAGPGRTNYNSRHARRHDVTERTTP 118
Query: 328 DDLRAEQAARAAPETRVLRVCVRVRVWAG 356
L +A R A + +C +R W G
Sbjct: 119 QSLADGEAGRVAED-----LC--LRAWNG 140
>gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
sapiens]
Length = 231
Score = 32.3 bits (72), Expect = 0.78
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 244 ALSVALSGGPRQRRALSLVWRRGQGRQGPEPPSPVGQAQALEEACECGVDTARPEVGGPH 303
+L +L G A+ R G G P PPSPV + QA + G ARP GG
Sbjct: 4 SLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSREGPSAARP--GGAS 61
Query: 304 G 304
G
Sbjct: 62 G 62
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 32.0 bits (71), Expect = 1.0
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 RTQEGAGVQGARAAVPS--LLTCRRLCPERWVMAEEAGGTSGPRVPLLK 70
R G G+ A AA P+ LTC+ E A AG SGPRVP ++
Sbjct: 111 RASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR 159
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 32.0 bits (71), Expect = 1.0
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 RTQEGAGVQGARAAVPS--LLTCRRLCPERWVMAEEAGGTSGPRVPLLK 70
R G G+ A AA P+ LTC+ E A AG SGPRVP ++
Sbjct: 129 RASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR 177
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 32.0 bits (71), Expect = 1.0
Identities = 42/129 (32%), Positives = 51/129 (39%), Gaps = 31/129 (24%)
Query: 209 GPCVPWGDLFGTG-PGLGFAPSSGTRGVERQRGAACALSVALSGGPRQRRALSLVWRRGQ 267
G C+P L G G+ AP++ R+R AA LS + PR RR
Sbjct: 32 GFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPR---------RRSP 82
Query: 268 GRQG--------PEPPS--PVGQAQALEEACECGVDTARPE--------VGGPHGPLLVA 309
G QG P PP+ P G A A+ A G ARP GPH P+L
Sbjct: 83 GPQGGGGGDIASPLPPALQPRG-APAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVL-- 139
Query: 310 PPGQRVAVR 318
PP A R
Sbjct: 140 PPSALAAPR 148
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 32.0 bits (71), Expect = 1.0
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 RTQEGAGVQGARAAVPS--LLTCRRLCPERWVMAEEAGGTSGPRVPLLK 70
R G G+ A AA P+ LTC+ E A AG SGPRVP ++
Sbjct: 129 RASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR 177
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,081,613
Number of Sequences: 37866
Number of extensions: 1042582
Number of successful extensions: 3324
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 3250
Number of HSP's gapped (non-prelim): 150
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.