PKD1L1 11608

Name: PKD1L1	Sequence: fasta or formatted (2849aa)		NCBI GI: 19923084
Description: polycystin-1L1		Referenced in: Arachidonate, Prostaglandins, and Leukotrienes Kidney
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 199 3 C cysteine 2.6 74 2 D aspartate 4.0 115 2 E glutamate 5.4 154 2 F phenylalanine 4.3 122 2 G glycine 6.5 186 3 H histidine 2.8 81 2 I isoleucine 3.7 105 3 K lysine 3.5 99 3 L leucine 11.2 318 5 M methionine 2.1 61 2 N asparagine 3.1 87 2 P proline 6.2 176 2 Q glutamine 4.3 123 2 R arginine 5.4 155 2 S serine 10.6 302 5 T threonine 5.7 162 3 V valine 6.8 194 3 W tryptophan 1.8 52 2 Y tyrosine 2.9 84 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 polycystin-1L1 PKD1L2 0.034 polycystin 1-like 2 isoform a PKDREJ 0.022 receptor for egg jelly-like protein precursor PKD1L3 0.017 PREDICTED: polycystin 1-like 3 PKD1L3 0.017 polycystin 1-like 3 PKD1L3 0.017 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1L3 0.017 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1 0.017 polycystin 1 isoform 2 precursor PKD1 0.017 polycystin 1 isoform 1 precursor PKD2 0.013 polycystin 2 LOXHD1 0.009 lipoxygenase homology domains 1 isoform 2 LOXHD1 0.009 lipoxygenase homology domains 1 isoform 1 LOXHD1 0.009 lipoxygenase homology domains 1 isoform 3 PKD2L2 0.009 polycystic kidney disease 2-like 2 PKD2L1 0.009 polycystic kidney disease 2-like 1 LOC100293597 0.006 PREDICTED: similar to hCG2036697 LOC100291435 0.006 PREDICTED: hypothetical protein XP_002347033 LOC100287651 0.006 PREDICTED: hypothetical protein XP_002342894 DENND5A 0.004 RAB6 interacting protein 1 DENND5B 0.003 DENN/MADD domain containing 5B KIAA1618 0.003 hypothetical protein LOC57714 SDC3 0.003 syndecan 3 ALOX5 0.003 arachidonate 5-lipoxygenase PPP1R13L 0.003 protein phosphatase 1, regulatory subunit 13 like [... PPP1R13L 0.003 protein phosphatase 1, regulatory subunit 13 like [H... EIF4G1 0.003 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.003 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.003 eukaryotic translation initiation factor 4 gamma, 1 ... NACA 0.003 nascent polypeptide-associated complex alpha subuni... MUPCDH 0.002 mucin and cadherin-like isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.