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Search of human proteins with 239749117
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749117 PREDICTED: hypothetical protein XP_002346917 [Homo
sapiens]
(136 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749117 PREDICTED: hypothetical protein XP_002346917 [Homo ... 276 5e-75
gi|222831660 family with sequence similarity 171, member A2 [Hom... 39 0.002
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 38 0.002
gi|239753399 PREDICTED: hypothetical protein [Homo sapiens] 37 0.005
gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo ... 37 0.005
gi|115511036 alpha-kinase 3 [Homo sapiens] 36 0.011
gi|153792780 additional sex combs like 2 [Homo sapiens] 36 0.011
gi|239749709 PREDICTED: hypothetical protein [Homo sapiens] 35 0.014
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 35 0.019
gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo sap... 35 0.019
gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo sap... 35 0.019
gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo sap... 35 0.019
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 35 0.019
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 35 0.019
gi|24308394 hypothetical protein LOC140893 [Homo sapiens] 35 0.025
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 34 0.032
gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Hom... 34 0.032
gi|169210350 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|113426339 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|113426005 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 34 0.042
gi|126090909 engrailed homeobox 1 [Homo sapiens] 33 0.055
gi|33286444 mastermind-like 2 [Homo sapiens] 33 0.055
gi|169213067 PREDICTED: hypothetical protein [Homo sapiens] 33 0.055
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 33 0.055
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 33 0.055
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 33 0.055
>gi|239749117 PREDICTED: hypothetical protein XP_002346917 [Homo
sapiens]
Length = 136
Score = 276 bits (705), Expect = 5e-75
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MAKRRRSVMSRYTSSWGSQRRGSCSVELRIFFTPCKVKEQRCEQRGAAAQLDRRLLFRFL 60
MAKRRRSVMSRYTSSWGSQRRGSCSVELRIFFTPCKVKEQRCEQRGAAAQLDRRLLFRFL
Sbjct: 1 MAKRRRSVMSRYTSSWGSQRRGSCSVELRIFFTPCKVKEQRCEQRGAAAQLDRRLLFRFL 60
Query: 61 EAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
EAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP
Sbjct: 61 EAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
Query: 121 TAPAPLPPATALPLLF 136
TAPAPLPPATALPLLF
Sbjct: 121 TAPAPLPPATALPLLF 136
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 38.5 bits (88), Expect = 0.002
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 61 EAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
EA AAG G P P ARA +RP G S EGGGG G GA
Sbjct: 552 EAGAAGVG---DEPAPPEGTAPGPARAFPQPDPQRPQMPGHSGPGGEGGGGGGEGWGA-- 606
Query: 121 TAPAPLPPATALPLLF 136
AP+ + +P+LF
Sbjct: 607 GRAAPVSGSVTIPVLF 622
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 38.1 bits (87), Expect = 0.002
Identities = 43/121 (35%), Positives = 49/121 (40%), Gaps = 25/121 (20%)
Query: 35 CKVKEQRC-EQRGAAAQLDRRLLFRFLEAAAAGQGAT-----TTAPRAPAEARASAARAL 88
C K+QR EQR +A R R LE A GQG + RAP A A AA A
Sbjct: 1303 CGQKKQRLGEQRERSASPQRAARPR-LEEAPGGQGRPEAGRPASEARAPGLAAADAADAA 1361
Query: 89 RTAGTERPCGDGRSQR------------SPEGGGGAGA-----RGGAWP-TAPAPLPPAT 130
R G E P S+ + GGGG+GA R GA P P PP
Sbjct: 1362 RAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARAGPRPGPRPPGG 1421
Query: 131 A 131
A
Sbjct: 1422 A 1422
>gi|239753399 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 37.0 bits (84), Expect = 0.005
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 43 EQRGAAAQLDRRLLFRFLEAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRS 102
E+RG + F +GA APR P R AA ER R
Sbjct: 48 ERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARD 107
Query: 103 QRSPEGGGGA--GARGGAWPTAPAPLPPATALP 133
+ +GGG G RG + PA A +LP
Sbjct: 108 RGGGDGGGARADGLRGRSPRRRPAGRAHARSLP 140
>gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo
sapiens]
Length = 165
Score = 37.0 bits (84), Expect = 0.005
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 43 EQRGAAAQLDRRLLFRFLEAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRS 102
E+RG + F +GA APR P R AA ER R
Sbjct: 48 ERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARD 107
Query: 103 QRSPEGGGGA--GARGGAWPTAPAPLPPATALP 133
+ +GGG G RG + PA A +LP
Sbjct: 108 RGGGDGGGARADGLRGRSPRRRPAGRAHARSLP 140
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 35.8 bits (81), Expect = 0.011
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 65 AGQGATTTAPRAPAEA------RASAARALRTAGTERPCGDGRSQRSPEGGGGAGARG-- 116
AG GA T AP P + RA + T RP R R P G A RG
Sbjct: 121 AGPGAGTWAPAPPGVSKPRCPGRARPGEGQQQVTTARPPAINRGARQPRAGAAAAGRGPG 180
Query: 117 -GAWPTAPA 124
GAW T A
Sbjct: 181 AGAWRTGEA 189
Score = 32.7 bits (73), Expect = 0.094
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 62 AAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGA 118
AAAAG+G A R EA ASA A+ G S+R+P G GAG R GA
Sbjct: 172 AAAAGRGPGAGAWRT-GEAAASAGPAVGEGGAMG------SRRAPSRGWGAGGRSGA 221
>gi|153792780 additional sex combs like 2 [Homo sapiens]
Length = 1435
Score = 35.8 bits (81), Expect = 0.011
Identities = 22/46 (47%), Positives = 24/46 (52%)
Query: 73 APRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGA 118
A RA A A A+AA A GT G G Q EGG G ARGG+
Sbjct: 669 AQRAAAAAAAAAAAAASVGGTIPGPGPGGGQGPGEGGEGQTARGGS 714
>gi|239749709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 35.4 bits (80), Expect = 0.014
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 67 QGATTTAPRAPAEARASAARALRTAGT---ERPCGDGRSQRSPEG--GGGAGARGGAWPT 121
QGA A R AE R + R AG R G R+ RSP+G G A P
Sbjct: 107 QGAERQASRPHAEHRLGLSHLTRAAGAGAARRRAGAART-RSPKGCRAGAARLERAGGPA 165
Query: 122 APAPLPPA 129
APA +PPA
Sbjct: 166 APARVPPA 173
Score = 26.9 bits (58), Expect = 5.1
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 40 QRCEQRGAAAQLDRRL----LFRFLEAAAAGQGATTTAPRAPAEARASAARALRTAGTER 95
Q E++ + + RL L R A AA + A R+P RA AAR R G
Sbjct: 107 QGAERQASRPHAEHRLGLSHLTRAAGAGAARRRAGAARTRSPKGCRAGAARLERAGGPAA 166
Query: 96 P 96
P
Sbjct: 167 P 167
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 35.0 bits (79), Expect = 0.019
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 62 AAAAGQGATTTAPRAPAEARASAARALRTAGTER---PCGDGRSQRSPEGGGGAGARGGA 118
A+ G GA +P+ A +S+ L TA + PCG G GGGG G GG
Sbjct: 412 ASLHGAGAAGPGSGSPSAAASSSWHTLFTAEEGQLYGPCGGGGGGGGGGGGGGGGGGGGG 471
Query: 119 WPTAPAPLP 127
A A P
Sbjct: 472 GGEAGAVAP 480
>gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 35.0 bits (79), Expect = 0.019
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 57 FRFLEAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGR--------SQRSPEG 108
FR +++ A TAP+A + SA + + A + P G G S R+P G
Sbjct: 5 FRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQ-ASPDSPAGSGSAPRIAPLISIRTPGG 63
Query: 109 GGGAGARGGAWPTAPAPLPPATA 131
G G+ A P A +PP+ A
Sbjct: 64 SGQNGSAPQAAPQARRTVPPSLA 86
>gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 35.0 bits (79), Expect = 0.019
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 57 FRFLEAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGR--------SQRSPEG 108
FR +++ A TAP+A + SA + + A + P G G S R+P G
Sbjct: 5 FRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQ-ASPDSPAGSGSAPRIAPLISIRTPGG 63
Query: 109 GGGAGARGGAWPTAPAPLPPATA 131
G G+ A P A +PP+ A
Sbjct: 64 SGQNGSAPQAAPQARRTVPPSLA 86
>gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 35.0 bits (79), Expect = 0.019
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 57 FRFLEAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGR--------SQRSPEG 108
FR +++ A TAP+A + SA + + A + P G G S R+P G
Sbjct: 5 FRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQ-ASPDSPAGSGSAPRIAPLISIRTPGG 63
Query: 109 GGGAGARGGAWPTAPAPLPPATA 131
G G+ A P A +PP+ A
Sbjct: 64 SGQNGSAPQAAPQARRTVPPSLA 86
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 35.0 bits (79), Expect = 0.019
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 63 AAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGG 117
+A Q ++ +P A A A A+AA A + R G G GGG+G+ GG
Sbjct: 444 SAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGG 498
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 35.0 bits (79), Expect = 0.019
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 74 PRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWPTAPAPLPPATALP 133
P APA A +AA PCG GG +GA+ A P PLPP + P
Sbjct: 115 PEAPAAAARAAALVAHPGAGSYPCG----------GGSSGAQPSAPPPPAPPLPPTPSPP 164
>gi|24308394 hypothetical protein LOC140893 [Homo sapiens]
Length = 664
Score = 34.7 bits (78), Expect = 0.025
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 62 AAAAGQGATTTAPRAPAEARASAARALRTAGTERPC-----GDGRSQRSPEGGGGAGARG 116
AAA G T P P A+ + A A + ++P G R Q +P+ G G+
Sbjct: 407 AAAGLSGGRHTQPAGPGRAQRTEAAATQDCALDKPLDLSEWGRARGQDTPKPAGQHGSLS 466
Query: 117 GAWPTAPAPLPPATALPL 134
A +P PP + PL
Sbjct: 467 PAAAHTASPEPPTQSGPL 484
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 34.3 bits (77), Expect = 0.032
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 64 AAGQGATTTAPRAPAEARASAARALRTAGT-ERPCGDGRSQRSPEGGGGAG 113
AAG+G P P RA+ ARA R G ERP R R+ GG AG
Sbjct: 39 AAGKGQR---PPGPGRVRAAQARARRGGGARERPAEGARGPRAARGGARAG 86
>gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Homo
sapiens]
Length = 802
Score = 34.3 bits (77), Expect = 0.032
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 74 PRAPAEARASAAR-ALRTA----GTERPCGDGRSQRSPEGGGGAGARGGAWPTAPAPLPP 128
P AP E RA +R +L T G P G S GG +R G+WP P PP
Sbjct: 52 PVAPEELRAPGSRWSLGTPAPLQGLLWPLSPGGSDTEITSGGMRPSRAGSWPHCPGAQPP 111
Query: 129 ATALP 133
A P
Sbjct: 112 ALEGP 116
>gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 33.9 bits (76), Expect = 0.042
Identities = 27/58 (46%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 63 AAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
AAA T TA P AR +AA A R AG+E GR R P G AG GGA P
Sbjct: 89 AAAPHAHTATASPPPGSARRAAAVA-RHAGSE-----GRGWRPPGLGREAGPVGGAEP 140
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.9 bits (76), Expect = 0.042
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 66 GQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWPTAPAP 125
GQGA P P A +R G RP RSP G G W A P
Sbjct: 186 GQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPL------RSPHSGSG-------WTPARPP 232
Query: 126 LPPATA 131
PPA A
Sbjct: 233 SPPAGA 238
Score = 28.1 bits (61), Expect = 2.3
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 68 GATTTAPRAPAEARASAARALRTAGTERPCGD-GRSQRSPEGGGGAGARGGAWPTAPAPL 126
G PR A A + R T RP G G ++R G GA A G PT P P
Sbjct: 144 GGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVG---PTGPRPT 200
Query: 127 --PPATALP 133
PP+ P
Sbjct: 201 GAPPSRRTP 209
>gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 33.9 bits (76), Expect = 0.042
Identities = 27/58 (46%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 63 AAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
AAA T TA P AR +AA A R AG+E GR R P G AG GGA P
Sbjct: 89 AAAPHAHTATASPPPGSARRAAAVA-RHAGSE-----GRGWRPPGLGREAGPVGGAEP 140
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.9 bits (76), Expect = 0.042
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 66 GQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWPTAPAP 125
GQGA P P A +R G RP RSP G G W A P
Sbjct: 186 GQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPL------RSPHSGSG-------WTPARPP 232
Query: 126 LPPATA 131
PPA A
Sbjct: 233 SPPAGA 238
Score = 28.1 bits (61), Expect = 2.3
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 68 GATTTAPRAPAEARASAARALRTAGTERPCGD-GRSQRSPEGGGGAGARGGAWPTAPAPL 126
G PR A A + R T RP G G ++R G GA A G PT P P
Sbjct: 144 GGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVG---PTGPRPT 200
Query: 127 --PPATALP 133
PP+ P
Sbjct: 201 GAPPSRRTP 209
>gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 33.9 bits (76), Expect = 0.042
Identities = 27/58 (46%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 63 AAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
AAA T TA P AR +AA A R AG+E GR R P G AG GGA P
Sbjct: 89 AAAPHAHTATASPPPGSARRAAAVA-RHAGSE-----GRGWRPPGLGREAGPVGGAEP 140
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 33.9 bits (76), Expect = 0.042
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 64 AAGQGATTTAPRAPAEARASAARALRTAGT-ERPCGDGRSQRSPEGGGGAG---ARGGAW 119
A G+G P P RA+ ARA R G ERP R R+ GG A +
Sbjct: 39 ATGKGQR---PPGPGRVRAAQARARRGGGARERPAEGARGPRAARGGARAAPMPSSAPRG 95
Query: 120 PTAPAPLPPATA 131
PT PA P++A
Sbjct: 96 PTEPALRRPSSA 107
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.9 bits (76), Expect = 0.042
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 66 GQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWPTAPAP 125
GQGA P P A +R G RP RSP G G W A P
Sbjct: 186 GQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPL------RSPHSGSG-------WTPARPP 232
Query: 126 LPPATA 131
PPA A
Sbjct: 233 SPPAGA 238
Score = 28.1 bits (61), Expect = 2.3
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 68 GATTTAPRAPAEARASAARALRTAGTERPCGD-GRSQRSPEGGGGAGARGGAWPTAPAPL 126
G PR A A + R T RP G G ++R G GA A G PT P P
Sbjct: 144 GGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVG---PTGPRPT 200
Query: 127 --PPATALP 133
PP+ P
Sbjct: 201 GAPPSRRTP 209
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 33.5 bits (75), Expect = 0.055
Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 61 EAAAAGQGATTTAPRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
+ AAAG GA+ A A A A+AA A A D S G G GA+G +P
Sbjct: 184 QPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGSGGGAGSPGAQGTKYP 243
Score = 30.0 bits (66), Expect = 0.61
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 74 PRAPAEARASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWPTAPAPLPPA 129
P++ ++ AA A G G S G G+G+ G + P +P P PP+
Sbjct: 8 PKSQRDSALGAAAAATPGGLSLSLSPGAS-----GSSGSGSDGDSVPVSPQPAPPS 58
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 33.5 bits (75), Expect = 0.055
Identities = 35/122 (28%), Positives = 42/122 (34%), Gaps = 24/122 (19%)
Query: 28 LRIFFTPCKVKEQRCE---QRGAAAQLDRRL--LFRFLEAAAAGQGA------------- 69
LR C+ CE +RG A DR + L GQGA
Sbjct: 40 LRARIAVCRQHHLSCEGRYERGRAESSDRERESTLQLLSLVQHGQGARKAGKHTKATATA 99
Query: 70 -TTTAPRAPAEARASAARALRTAGTERPCGDGRSQR-----SPEGGGGAGARGGAWPTAP 123
TTTAP P A +A++A TA P + S GG G G P A
Sbjct: 100 ATTTAPPPPPAAPPAASQAAATAAPPPPPDYHHHHQQHLLNSSNNGGSGGINGEQQPPAS 159
Query: 124 AP 125
P
Sbjct: 160 TP 161
>gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 33.5 bits (75), Expect = 0.055
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 82 ASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
AS +R+L AG ERP R R+P GG G GG P
Sbjct: 229 ASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGIP 267
Score = 26.9 bits (58), Expect = 5.1
Identities = 36/122 (29%), Positives = 47/122 (38%), Gaps = 10/122 (8%)
Query: 17 GSQRRGSCSVELRIFFTPCKVKEQRCEQRGAAAQLDRRLLFRFLEAAAAGQGATTTAPRA 76
GS++ G + TP K R + + AAA L L+ R AA Q + AP
Sbjct: 14 GSKKTGEKRPAQTLQRTPRKHAASRGQAQAAAAALTPSLIPR----AAIRQ---SQAPDL 66
Query: 77 PAEARA--SAARALRTAGT-ERPCGDGRSQRSPEGGGGAGARGGAWPTAPAPLPPATALP 133
+R AL G+ E G GR + P G A P PL P+ A P
Sbjct: 67 LLASRGITGCVNALGHRGSPEAVRGPGRGRGPPNKAGRAAGSPTRVQRRPRPLRPSRAAP 126
Query: 134 LL 135
L
Sbjct: 127 RL 128
Score = 26.2 bits (56), Expect = 8.8
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 9/68 (13%)
Query: 63 AAAGQGATTTAPRAPAEARASAARA---------LRTAGTERPCGDGRSQRSPEGGGGAG 113
A G+ T R P R S A LR + RP RS R P G G
Sbjct: 102 AGRAAGSPTRVQRRPRPLRPSRAAPRLRGEEPSLLRPQLSRRPRALRRSTRVPAAGKGGD 161
Query: 114 ARGGAWPT 121
R +PT
Sbjct: 162 RRAPVFPT 169
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 33.5 bits (75), Expect = 0.055
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 82 ASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
AS +R+L AG ERP R R+P GG G GG P
Sbjct: 234 ASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGIP 272
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 33.5 bits (75), Expect = 0.055
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 45 RGAAAQLDRRLLFRFLEAAAAGQGATTTA-PRAPAEARASAARALRTAGTERPCGDGRSQ 103
R A +R + A A +G T A P P R R+ + P G R +
Sbjct: 179 RATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRS-----GDVPRGGARVE 233
Query: 104 RSPEGGGGAGARGGAWPTAPAPL 126
R P G GAG RGGA P PL
Sbjct: 234 R-PTGRRGAGGRGGAQRIPPRPL 255
Score = 26.9 bits (58), Expect = 5.1
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 31 FFTPCKVKEQRCEQRGAAAQLDRRLLFRFLEAAAAGQGATTTAPRA--PAEARASAARAL 88
F T C +R R L L A +A A + +PR P A AA
Sbjct: 36 FLTSCTFFCRRAPLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRG 95
Query: 89 RTAGTERPCGDGRSQRSPEGGGGAGAR 115
G R C GR + G GG GAR
Sbjct: 96 GAGGGGRCCTRGRGRFPCAGSGGRGAR 122
Score = 26.9 bits (58), Expect = 5.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 83 SAARALRTAGTERPCGDGRSQRSPEGGGGAGARGG 117
+A A+ AG+ P G G P G GA GG
Sbjct: 66 AAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGG 100
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 33.5 bits (75), Expect = 0.055
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 82 ASAARALRTAGTERPCGDGRSQRSPEGGGGAGARGGAWP 120
AS +R+L AG ERP R R+P GG G GG P
Sbjct: 234 ASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGIP 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,831,132
Number of Sequences: 37866
Number of extensions: 303325
Number of successful extensions: 4670
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 3822
Number of HSP's gapped (non-prelim): 1133
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.