BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239748874 PREDICTED: hypothetical protein XP_002346837 [Homo sapiens] (127 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754312 PREDICTED: hypothetical protein XP_002345955 [Homo ... 276 3e-75 gi|239748874 PREDICTED: hypothetical protein XP_002346837 [Homo ... 276 3e-75 gi|239742903 PREDICTED: hypothetical protein XP_002342672 [Homo ... 276 3e-75 gi|22091448 GDNF family receptor alpha 4 isoform b precursor [Ho... 34 0.027 gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens] 32 0.17 gi|117414152 transcription factor 19 [Homo sapiens] 31 0.22 gi|117414156 transcription factor 19 [Homo sapiens] 31 0.22 gi|239755121 PREDICTED: hypothetical protein [Homo sapiens] 31 0.29 gi|239749649 PREDICTED: hypothetical protein [Homo sapiens] 31 0.29 gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo ... 31 0.29 gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens] 31 0.29 gi|30425464 transmembrane protein 105 [Homo sapiens] 31 0.29 gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 30 0.38 gi|110832843 TBP-associated factor 4 [Homo sapiens] 30 0.38 gi|14993776 skeletal myosin light chain kinase [Homo sapiens] 30 0.38 gi|119508426 alpha 3 type IX collagen [Homo sapiens] 30 0.65 gi|7657575 sirtuin 1 isoform a [Homo sapiens] 29 0.85 gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 29 0.85 gi|239752588 PREDICTED: hypothetical protein XP_002348309, parti... 29 0.85 gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 29 0.85 gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 29 0.85 gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 29 0.85 gi|66912172 hairy and enhancer of split 3 [Homo sapiens] 29 0.85 gi|38202224 discs large-associated protein 2 [Homo sapiens] 29 1.1 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 28 1.5 gi|239757898 PREDICTED: similar to testis expressed sequence 13A... 28 1.5 gi|239752412 PREDICTED: similar to testis expressed sequence 13A... 28 1.5 gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo ... 28 1.5 gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 28 1.5 gi|169216868 PREDICTED: similar to testis expressed sequence 13A... 28 1.5 >gi|239754312 PREDICTED: hypothetical protein XP_002345955 [Homo sapiens] Length = 127 Score = 276 bits (706), Expect = 3e-75 Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 1 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER 60 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER Sbjct: 1 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER 60 Query: 61 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR 120 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR Sbjct: 61 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR 120 Query: 121 ATTWDLL 127 ATTWDLL Sbjct: 121 ATTWDLL 127 >gi|239748874 PREDICTED: hypothetical protein XP_002346837 [Homo sapiens] Length = 127 Score = 276 bits (706), Expect = 3e-75 Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 1 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER 60 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER Sbjct: 1 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER 60 Query: 61 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR 120 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR Sbjct: 61 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR 120 Query: 121 ATTWDLL 127 ATTWDLL Sbjct: 121 ATTWDLL 127 >gi|239742903 PREDICTED: hypothetical protein XP_002342672 [Homo sapiens] Length = 127 Score = 276 bits (706), Expect = 3e-75 Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 1 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER 60 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER Sbjct: 1 MPTGITYCGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGER 60 Query: 61 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR 120 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR Sbjct: 61 RCPPGSLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFRQVPSAFWLFGVWR 120 Query: 121 ATTWDLL 127 ATTWDLL Sbjct: 121 ATTWDLL 127 >gi|22091448 GDNF family receptor alpha 4 isoform b precursor [Homo sapiens] Length = 299 Score = 34.3 bits (77), Expect = 0.027 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 19/83 (22%) Query: 9 GLNPPHTLEGATTLALTRGPQASPPGI---LEPREKRGR--DHGPARPRSAFFPGERRCP 63 GL+P H A QASPPG+ + P +R R GP RP A G R P Sbjct: 146 GLSPAHRPPAA---------QASPPGLSGLVHPSAQRPRRLPAGPGRPLPARLRGPRGVP 196 Query: 64 PGSLLAPDQEQGVGT-----CNC 81 G+ + P+ V C+C Sbjct: 197 AGTAVTPNYVDNVSARVAPWCDC 219 >gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens] Length = 324 Score = 31.6 bits (70), Expect = 0.17 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 27 GPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCPVAPR 86 GP+A+ PG+ E R + GR PA+ SA FP P + PD + PR Sbjct: 58 GPEAAAPGLPELRAELGRAPSPAKCASA-FPAAPAFYPRAYSDPDPAKD---------PR 107 Query: 87 AGRKE 91 A +KE Sbjct: 108 AEKKE 112 >gi|117414152 transcription factor 19 [Homo sapiens] Length = 345 Score = 31.2 bits (69), Expect = 0.22 Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 28 PQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCP 82 P+ PP ++EPR+K D P P R+ P + +AP G C P Sbjct: 241 PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAP 295 >gi|117414156 transcription factor 19 [Homo sapiens] Length = 345 Score = 31.2 bits (69), Expect = 0.22 Identities = 17/55 (30%), Positives = 24/55 (43%) Query: 28 PQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCP 82 P+ PP ++EPR+K D P P R+ P + +AP G C P Sbjct: 241 PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAP 295 >gi|239755121 PREDICTED: hypothetical protein [Homo sapiens] Length = 339 Score = 30.8 bits (68), Expect = 0.29 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 26 RGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCP 82 R P A+ PG R GR H A R E R PGS + G G C CP Sbjct: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEAR--PGS-----ERAGCGRCRCP 275 >gi|239749649 PREDICTED: hypothetical protein [Homo sapiens] Length = 339 Score = 30.8 bits (68), Expect = 0.29 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 26 RGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCP 82 R P A+ PG R GR H A R E R PGS + G G C CP Sbjct: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEAR--PGS-----ERAGCGRCRCP 275 >gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo sapiens] Length = 339 Score = 30.8 bits (68), Expect = 0.29 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 26 RGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCP 82 R P A+ PG R GR H A R E R PGS + G G C CP Sbjct: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEAR--PGS-----ERAGCGRCRCP 275 >gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens] Length = 329 Score = 30.8 bits (68), Expect = 0.29 Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 11/67 (16%) Query: 30 ASPPGILEPREK-RGRDHGPARPRSAFFPGERR----CPPGSLLAPDQEQGVGTCNCPVA 84 ASP G E K RGRD GP R P E+R GS D E G A Sbjct: 160 ASPSGSSEATGKPRGRDGGPRREEDDVPPEEKRLRLLLERGSAQPEDCEDGED------A 213 Query: 85 PRAGRKE 91 PR GRK+ Sbjct: 214 PRPGRKK 220 >gi|30425464 transmembrane protein 105 [Homo sapiens] Length = 129 Score = 30.8 bits (68), Expect = 0.29 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 16/69 (23%) Query: 10 LNPPHTLEGATTLALTRGPQASPPG-----------ILEPREKRGRDHGPARPRSAFFPG 58 L PP L+G T PQ SPP + E + +R R GPA +S F G Sbjct: 43 LRPPTLLQGPRT-----SPQGSPPRSPWGDCAEPSCLCEMKIRRRRHEGPAWGQSGFLAG 97 Query: 59 ERRCPPGSL 67 P SL Sbjct: 98 GLHLVPSSL 106 >gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] Length = 381 Score = 30.4 bits (67), Expect = 0.38 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Query: 9 GLNPPHTLEGATTLALTRGPQASP----PGILEPREKRGRDHGPARPRSAFF--PGERRC 62 G+ H G+ A T PQ +P P + +P E+ + PA PR+ P RR Sbjct: 266 GVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRP 325 Query: 63 PPGSLLAP 70 PP + +P Sbjct: 326 PPATAPSP 333 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 30.4 bits (67), Expect = 0.38 Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 5/71 (7%) Query: 9 GLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLL 68 G P EGA A P+ P G P + GP PR P PP + L Sbjct: 72 GAGPAAPAEGAPGAA----PEPPPAGRARPGGGGPQRPGPPSPRRPLVPA-GPAPPAAKL 126 Query: 69 APDQEQGVGTC 79 P E G+C Sbjct: 127 RPPPEGSAGSC 137 >gi|14993776 skeletal myosin light chain kinase [Homo sapiens] Length = 596 Score = 30.4 bits (67), Expect = 0.38 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 13 PHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQ 72 P + +G TLA P G E G G A P +A P + P S+ P Sbjct: 57 PASEKGDGTLAQPSTSSQGPKG--EGDRGGGPAEGSAGPPAAL-PQQTATPETSVKKPKA 113 Query: 73 EQGVGTCNCPVAPRAGRK 90 EQG P PR G+K Sbjct: 114 EQGASGSQDPGKPRVGKK 131 >gi|119508426 alpha 3 type IX collagen [Homo sapiens] Length = 684 Score = 29.6 bits (65), Expect = 0.65 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 11/70 (15%) Query: 29 QASPPGILEPREKRGRDHGPARPRSAFFPG--------ERRCPPGSLLAPDQEQGVGTCN 80 +A PPG+ P +G P +P A PG R PPG AP + +G Sbjct: 51 EAGPPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGP-- 108 Query: 81 CPVAPRAGRK 90 P P G K Sbjct: 109 -PGPPGLGGK 117 >gi|7657575 sirtuin 1 isoform a [Homo sapiens] Length = 747 Score = 29.3 bits (64), Expect = 0.85 Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Query: 26 RGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCPVAP 85 R +SP G EP KR R GP RS PGE PG AP++E CP A Sbjct: 22 REAASSPAG--EPLRKRPRRDGPGLERS---PGE----PGG-AAPEREVPAAARGCPGAA 71 Query: 86 RA 87 A Sbjct: 72 AA 73 >gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] Length = 344 Score = 29.3 bits (64), Expect = 0.85 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 2 PTGITYCGLNP-PHTLEGATTLALTRGPQASPP---GILEPREKRGRDHGPARPRSA 54 P G++ P PH A RG +A+ P G+++PR K D P R R+A Sbjct: 269 PAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAA 325 >gi|239752588 PREDICTED: hypothetical protein XP_002348309, partial [Homo sapiens] Length = 327 Score = 29.3 bits (64), Expect = 0.85 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 13 PHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGS 66 PH +G+ A RGPQ EP+ H PA P S+ + G + P S Sbjct: 206 PHASQGSQWSAWGRGPQVVGAA-WEPQAGAAAPHQPAPPESSAWQGRMQGIPAS 258 >gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] Length = 344 Score = 29.3 bits (64), Expect = 0.85 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 2 PTGITYCGLNP-PHTLEGATTLALTRGPQASPP---GILEPREKRGRDHGPARPRSA 54 P G++ P PH A RG +A+ P G+++PR K D P R R+A Sbjct: 269 PAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAA 325 >gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo sapiens] Length = 344 Score = 29.3 bits (64), Expect = 0.85 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 2 PTGITYCGLNP-PHTLEGATTLALTRGPQASPP---GILEPREKRGRDHGPARPRSA 54 P G++ P PH A RG +A+ P G+++PR K D P R R+A Sbjct: 269 PAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAA 325 >gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] Length = 2944 Score = 29.3 bits (64), Expect = 0.85 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 28 PQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPD 71 P P + P+ ++G D GPA PR A R PPG +L D Sbjct: 1542 PAVVGPAVAGPKGEKG-DVGPAGPRGATGVQGERGPPGLVLPGD 1584 >gi|66912172 hairy and enhancer of split 3 [Homo sapiens] Length = 186 Score = 29.3 bits (64), Expect = 0.85 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 51 PRSAFFP-GERRCPPG--SLLAPDQEQGVGTCNCPVAPRAGRKERLFHTPLGESRVFEFR 107 PR A P G R C PG LL E G G CP+ P + + LG+ FR Sbjct: 60 PRGAEQPSGFRSCLPGVSQLLRRGDEVGSGL-RCPLVPESAAGSTMDSAGLGQEAPALFR 118 Query: 108 QVPSAFW 114 A W Sbjct: 119 PCTPAVW 125 >gi|38202224 discs large-associated protein 2 [Homo sapiens] Length = 975 Score = 28.9 bits (63), Expect = 1.1 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%) Query: 8 CGLNPPHTLEGATTLALTRGPQASPPGILEPREKRGRDHGPARPRSA 54 CGL PP E L GP A PP +L P + PRS+ Sbjct: 19 CGLAPPEDCEH-----LHHGPDARPPYLLSPADSCPGGRHRCSPRSS 60 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 28.5 bits (62), Expect = 1.5 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 GPQASPPGILEPREKRGRDHGPARPRSAFFPGERRC--PPGS 66 GP A PPG P+ +G P P +A FPG R PPGS Sbjct: 849 GP-AGPPG---PQGVKGERGSPGGPGAAGFPGARGLPGPPGS 886 >gi|239757898 PREDICTED: similar to testis expressed sequence 13A [Homo sapiens] Length = 652 Score = 28.5 bits (62), Expect = 1.5 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 6 TYCGLNPPHTLEGATTLALTR------GPQASPPGILEPREKRGRDHGPARPRSAFFPGE 59 +Y P +G TL +R GP+ L ++ GP P+ G+ Sbjct: 473 SYSQEGSPERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRSHIKEEGPEGPQRIVLQGD 532 Query: 60 RRC--PPGSLLAPDQEQGVGTC--NCPVAPRAGRKERLFHTPLGESRVFEFRQVP 110 R GS ++ QG+ T + P G ER TPLG+SR R+ P Sbjct: 533 NRSYSQEGSR---ERAQGMATLVFSRSCKPEEG-PERPQGTPLGDSRSHGVRESP 583 >gi|239752412 PREDICTED: similar to testis expressed sequence 13A [Homo sapiens] Length = 652 Score = 28.5 bits (62), Expect = 1.5 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 6 TYCGLNPPHTLEGATTLALTR------GPQASPPGILEPREKRGRDHGPARPRSAFFPGE 59 +Y P +G TL +R GP+ L ++ GP P+ G+ Sbjct: 473 SYSQEGSPERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRSHIKEEGPEGPQRIVLQGD 532 Query: 60 RRC--PPGSLLAPDQEQGVGTC--NCPVAPRAGRKERLFHTPLGESRVFEFRQVP 110 R GS ++ QG+ T + P G ER TPLG+SR R+ P Sbjct: 533 NRSYSQEGSR---ERAQGMATLVFSRSCKPEEG-PERPQGTPLGDSRSHGVRESP 583 >gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo sapiens] Length = 296 Score = 28.5 bits (62), Expect = 1.5 Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 2/77 (2%) Query: 27 GPQASPPGILEPREKRGRDHGPARPRSAFFPGERRCPPGSLLAPDQEQGVGTCNCPVAPR 86 G A+ PG G G AR G RR P AP++ + P APR Sbjct: 188 GHLAAAPGAWRAAAPAGWGLGSARAAQRPREGSRRFPAPP--APERSRTPDCPAAPAAPR 245 Query: 87 AGRKERLFHTPLGESRV 103 R R H G+ RV Sbjct: 246 MRRPRRPPHRLRGQGRV 262 >gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] Length = 365 Score = 28.5 bits (62), Expect = 1.5 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 9 GLNPPHTLEGATTLALTRGPQASP----PGILEPREKRGRDHGPARPRSAFF--PGERRC 62 G+ H G+ A T PQ +P P + +P E+ + PA PR+ P RR Sbjct: 266 GVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRP 325 Query: 63 PP 64 PP Sbjct: 326 PP 327 >gi|169216868 PREDICTED: similar to testis expressed sequence 13A [Homo sapiens] Length = 714 Score = 28.5 bits (62), Expect = 1.5 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 6 TYCGLNPPHTLEGATTLALTR------GPQASPPGILEPREKRGRDHGPARPRSAFFPGE 59 +Y P +G TL +R GP+ L ++ GP P+ G+ Sbjct: 535 SYSQEGSPERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRSHIKEEGPEGPQRIVLQGD 594 Query: 60 RRC--PPGSLLAPDQEQGVGTC--NCPVAPRAGRKERLFHTPLGESRVFEFRQVP 110 R GS ++ QG+ T + P G ER TPLG+SR R+ P Sbjct: 595 NRSYSQEGSR---ERAQGMATLVFSRSCKPEEG-PERPQGTPLGDSRSHGVRESP 645 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.141 0.476 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,014,419 Number of Sequences: 37866 Number of extensions: 395857 Number of successful extensions: 1263 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 79 Number of HSP's that attempted gapping in prelim test: 1193 Number of HSP's gapped (non-prelim): 151 length of query: 127 length of database: 18,247,518 effective HSP length: 90 effective length of query: 37 effective length of database: 14,839,578 effective search space: 549064386 effective search space used: 549064386 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.