Guide to the Human Genome
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Search of human proteins with 239748442

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
         (296 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]           600   e-172
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ...   600   e-172
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ...   600   e-172
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             49   7e-06
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]           47   2e-05
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]         47   3e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  46   4e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      46   4e-05
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]            45   6e-05
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]           45   6e-05
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina...    45   6e-05
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]            45   8e-05
gi|153792074 proline rich 12 [Homo sapiens]                            45   8e-05
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               44   2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    43   3e-04
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ...    43   4e-04
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ...    43   4e-04
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    42   6e-04
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]     42   6e-04
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap...    42   6e-04
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     42   8e-04

>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 296

 Score =  600 bits (1547), Expect = e-172
 Identities = 296/296 (100%), Positives = 296/296 (100%)

Query: 1   MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV 60
           MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV
Sbjct: 1   MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV 60

Query: 61  ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL 120
           ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL
Sbjct: 61  ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL 120

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180
           GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA
Sbjct: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180

Query: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG 240
           RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG
Sbjct: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG 240

Query: 241 APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL 296
           APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL
Sbjct: 241 APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL 296


>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
           sapiens]
          Length = 296

 Score =  600 bits (1547), Expect = e-172
 Identities = 296/296 (100%), Positives = 296/296 (100%)

Query: 1   MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV 60
           MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV
Sbjct: 1   MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV 60

Query: 61  ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL 120
           ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL
Sbjct: 61  ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL 120

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180
           GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA
Sbjct: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180

Query: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG 240
           RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG
Sbjct: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG 240

Query: 241 APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL 296
           APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL
Sbjct: 241 APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL 296


>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
           sapiens]
          Length = 296

 Score =  600 bits (1547), Expect = e-172
 Identities = 296/296 (100%), Positives = 296/296 (100%)

Query: 1   MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV 60
           MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV
Sbjct: 1   MVFQLLFQSLSRVYVTIAAHLYHLIRTHRKYNYLGLQPSAGSSFPRVFGLSRSPGPLVRV 60

Query: 61  ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL 120
           ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL
Sbjct: 61  ALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTAL 120

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180
           GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA
Sbjct: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180

Query: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG 240
           RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG
Sbjct: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCG 240

Query: 241 APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL 296
           APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL
Sbjct: 241 APAVGTGPGRLRGCKSFLCSPVFFKCHVFQLLKTSGRPATEEIFWIQGVRLPSPEL 296


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 55/173 (31%), Positives = 68/173 (39%), Gaps = 16/173 (9%)

Query: 53  SPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGL 112
           SP P VR      A     RG+++     P P SA +       A A  AGR +R RR  
Sbjct: 340 SPSPRVRDKAAAAAPTPPARGKES-----PSPRSAPSSQGRGGRA-AGGAGRRRRRRRRR 393

Query: 113 LRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAP-A 171
            R R++A  P R   RRPR   P GS R  +    +   G GR      GA      P +
Sbjct: 394 RRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGR------GAPGPGPEPGS 447

Query: 172 RTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPR 224
             G      RA  R PR  RP    P+  PG        E   ++R  G  PR
Sbjct: 448 ERGHGGHGKRAKERPPRA-RPASTSPS--PGAHGRRGGPEGKSSSRSPGPHPR 497



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 137 GSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPV 196
           GS   P   P +P+P   R R+    AA    A  +  P   +A +S  + RG R     
Sbjct: 329 GSAHSPPDKPSSPSP---RVRDKAAAAAPTPPARGKESPSPRSAPSS--QGRGGRAAGGA 383

Query: 197 PTAPPGGLAAAAKDETSCAARERG------ASPRGDAGRVGRTRAVPSC----GAPAVGT 246
                          ++ A R RG      A PRG +  + R R+        GAP  G 
Sbjct: 384 GRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGP 443

Query: 247 GPGRLRG 253
            PG  RG
Sbjct: 444 EPGSERG 450


>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 56/169 (33%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 64  CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
           CY   G  RGR+ G+   PR      Q  A + A  AA+ R   A R RR LL     A 
Sbjct: 44  CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99

Query: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
                 P  P LR+PR         L + G RA   G   +   R   AS+D A   +  
Sbjct: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159

Query: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARERGASP 223
               AR   R     RPG   VP   PG   AA  +ET   A E   SP
Sbjct: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSP 208


>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
          Length = 261

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 59/192 (30%), Positives = 68/192 (35%), Gaps = 26/192 (13%)

Query: 67  VPGVRRG---RQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPA 123
           +PG RRG   R+   L    PG+  + L    A       R     R L         P 
Sbjct: 44  LPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARCL---------PL 94

Query: 124 RPRLRRPRHRLPGG---SRRLPAPGPRAPAPGKGRERELRTGAA-SIDRAPARTGPEDLA 179
           RP     RHR PGG   +   P P PR PAPG+     L  GAA  + RA    G    +
Sbjct: 95  RPHRPTRRHRRPGGFPLAWGSPQPAPR-PAPGRSSALALAGGAAPGVARAQRPGGSGGRS 153

Query: 180 ARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVP-- 237
                  PRG        T  PG    AA D        R A  RG A     T   P  
Sbjct: 154 HPGGPGSPRG------GGTVGPGDRGPAAADGGRPQRTVRAAETRGAAAAPPLTLEGPVQ 207

Query: 238 -SCGAPAVGTGP 248
              G PA+  GP
Sbjct: 208 SHHGTPALTQGP 219



 Score = 33.9 bits (76), Expect = 0.18
 Identities = 45/148 (30%), Positives = 51/148 (34%), Gaps = 35/148 (23%)

Query: 82  PRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRL 141
           PRP   R+  +A +   A    RAQ  R G    R+   GP  PR         GG    
Sbjct: 120 PRPAPGRSSALALAGGAAPGVARAQ--RPGGSGGRSHPGGPGSPR---------GGG--T 166

Query: 142 PAPGPRAPAPGKG-------RERELRTGAA-----------SIDRAPART----GPEDLA 179
             PG R PA   G       R  E R  AA           S    PA T     P D A
Sbjct: 167 VGPGDRGPAAADGGRPQRTVRAAETRGAAAAPPLTLEGPVQSHHGTPALTQGPQSPRDGA 226

Query: 180 ARASTRRPRGFRPGLPVPTAPPGGLAAA 207
              +  RP   R     P  PP  LA+A
Sbjct: 227 QLGACTRPVDVRDSGGRPLPPPDTLASA 254


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 43/120 (35%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 121  GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAP--ARTGPEDL 178
            GP  P ++R  H  P      P P P AP P K     L +G+A    AP  AR  P  L
Sbjct: 1254 GPGSPEVKRA-HGTPPPVSPKPPPPPTAPKPVKA-VAGLPSGSAGPSPAPSPARQPPAAL 1311

Query: 179  AARAST---------RRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGR 229
            A    T         + P    P L VP  PP   AAAA    +  A   GASP GD+ R
Sbjct: 1312 AKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASP-GDSAR 1370



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 93  ATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPG--PRAPA 150
           AT+   ++  GRA+ +            GP+ P  R   + L  G    PAPG  PR   
Sbjct: 688 ATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEG----PAPGTPPREAR 743

Query: 151 PGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLA-AAAK 209
           PG+      R     +   P +  P   +     + P   RPG P     P G A A AK
Sbjct: 744 PGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAK 803

Query: 210 DETS---CAARERGASPR 224
            + +       ER  SPR
Sbjct: 804 VKPTPQLLPPTERPMSPR 821



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 5/115 (4%)

Query: 141 LPAPGPRAPAPGKGRERELRT---GAASIDRAPARTGPEDLAARASTRRPRGFRPGLPVP 197
           + +P P  P P   +  ++ T      S +   A TGP ++    +T +P    P  P  
Sbjct: 631 IESPPPPEPTPADCQSPKMTTFQDSELSDELQAAMTGPAEVGP--TTEKPSSHLPPTPRA 688

Query: 198 TAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRLR 252
           T              S +    G  P G +  + R++       PA GT P   R
Sbjct: 689 TTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEGPAPGTPPREAR 743


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 41/114 (35%), Positives = 46/114 (40%), Gaps = 19/114 (16%)

Query: 144  PGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARAST------RRPRGFRPGLPVP 197
            PGP  PA  KG       GA     AP   GP+ +A +         R  RGF PGLP P
Sbjct: 925  PGPPGPAGEKGSP-----GADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGF-PGLPGP 978

Query: 198  TAPPGGLAAAAKDETSCAARERG-ASPRGDAGRVGRTRAVPSCGAPAVGTGPGR 250
            +  PG      K   S A+ ERG   P G  G  G        GAP     PGR
Sbjct: 979  SGEPG------KQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGR 1026



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 61/227 (26%), Positives = 71/227 (31%), Gaps = 35/227 (15%)

Query: 38  PSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAA 97
           P+    FP   G     GP  +   G     GVR     G+  PP P  A     A  A 
Sbjct: 339 PAGPPGFPGAVGAKGEAGP--QGPRGSEGPQGVR-----GEPGPPGPAGA-----AGPAG 386

Query: 98  QAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRH-RLPGG-------SRRLPAPGPRAP 149
              A G  Q   +G       A  P  P  R P   + PGG       S    APG +  
Sbjct: 387 NPGADG--QPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGD 444

Query: 150 APGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAK 209
              KG       G   +   P   G E          P G  PG P     PG       
Sbjct: 445 TGAKGEP-----GPVGVQGPPGPAGEEGKRGARGEPGPTGL-PGPPGERGGPGSRGFPGA 498

Query: 210 DETSCA---ARERG----ASPRGDAGRVGRTRAVPSCGAPAVGTGPG 249
           D  +     A ERG    A P+G  G  GR       GA  +   PG
Sbjct: 499 DGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPG 545



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 44/162 (27%), Positives = 48/162 (29%), Gaps = 38/162 (23%)

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGREREL-----------RTGAASIDRA 169
           GP  P    P  R   G    P P   A  PGK  ER +           + G A     
Sbjct: 566 GPPGP----PGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGP 621

Query: 170 PARTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAKDET---------SCAARERG 220
           P   GP             GF+ GLP P  PPG      +            S A  ERG
Sbjct: 622 PGPAGPAGERGEQGPAGSPGFQ-GLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERG 680

Query: 221 -------------ASPRGDAGRVGRTRAVPSCGAPAVGTGPG 249
                        A PRG  G  G   A    GAP      G
Sbjct: 681 FPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQG 722



 Score = 35.0 bits (79), Expect = 0.079
 Identities = 50/180 (27%), Positives = 65/180 (36%), Gaps = 18/180 (10%)

Query: 77  GDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRP---RHR 133
           G+  PP P  AR  L  T+        +  R   GL   +  A GPA P+        + 
Sbjct: 242 GERGPPGPQGARG-LPGTAGLPGM---KGHRGFSGLDGAKGDA-GPAGPKGEPGSPGENG 296

Query: 134 LPG--GSRRLPAPG--PRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRG 189
            PG  G R LP     P AP P   R  +  TGAA         GP         +   G
Sbjct: 297 APGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAG 356

Query: 190 FRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPG 249
             P  P  +  P G+    + E         A P G+ G  G+  A  + GAP +   PG
Sbjct: 357 --PQGPRGSEGPQGV----RGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPG 410



 Score = 35.0 bits (79), Expect = 0.079
 Identities = 37/119 (31%), Positives = 42/119 (35%), Gaps = 11/119 (9%)

Query: 135 PGGSRRLPAPGPRAPAPGKGRERELR-----TGAASIDRAPARTGPEDLAARASTRRPRG 189
           P G R    P     +PGK   R L       G A        +GP   A     R   G
Sbjct: 741 PKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPG 800

Query: 190 FR--PGLPVPTA---PPGGLAA-AAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAP 242
            R  PG P P     PPG      AK E   A  +  A P G AG  G    + + GAP
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAP 859



 Score = 33.9 bits (76), Expect = 0.18
 Identities = 35/119 (29%), Positives = 38/119 (31%), Gaps = 26/119 (21%)

Query: 135 PGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGL 194
           P G    P P     APG         GA      P  TG    A R     P G   G 
Sbjct: 843 PAGPAGPPGPIGNVGAPGA-------KGARGSAGPPGATGFPGAAGRVGPPGPSG-NAGP 894

Query: 195 PVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRLRG 253
           P P  P G              +E G  PRG+ G  GR   V   G P    GP   +G
Sbjct: 895 PGPPGPAG--------------KEGGKGPRGETGPAGRPGEVGPPGPP----GPAGEKG 935



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 37/144 (25%), Positives = 46/144 (31%), Gaps = 20/144 (13%)

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPA--PGKGRE---------RELRTGAASIDRA 169
           GP  P     R  +PG       PGP  P   PG G            E  TG  S+   
Sbjct: 121 GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP 180

Query: 170 PARTGPEDLAARASTRRPRGFR--------PGLPVPTAPPGGLAAAAKDETSCAARERG- 220
              +GP  L        P+GF+        PG   P  P G      K+     A + G 
Sbjct: 181 MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR 240

Query: 221 ASPRGDAGRVGRTRAVPSCGAPAV 244
              RG  G  G      + G P +
Sbjct: 241 PGERGPPGPQGARGLPGTAGLPGM 264



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 67/243 (27%), Positives = 84/243 (34%), Gaps = 33/243 (13%)

Query: 25  IRTHRKYNYL-GLQPSAGSSFPRVFGLSRSPGPLVRVA-LGCYAVPGVRRGRQAGDLSPP 82
           ++ HR ++ L G +  AG + P+  G   SPG       +G   +PG  RGR       P
Sbjct: 264 MKGHRGFSGLDGAKGDAGPAGPK--GEPGSPGENGAPGQMGPRGLPG-ERGRPGA----P 316

Query: 83  RPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLP 142
            P  AR    AT AA     G               A G A P+  R     P G R  P
Sbjct: 317 GPAGARGNDGATGAA--GPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEG-PQGVRGEP 373

Query: 143 AP----GPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPV-- 196
            P    G   PA   G + +   GA   + AP   G            P+G  PG P   
Sbjct: 374 GPPGPAGAAGPAGNPGADGQ--PGAKGANGAPGIAGAPGFPGARGPSGPQG--PGGPPGP 429

Query: 197 ------PTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPS----CGAPAVGT 246
                 P AP       AK E      +    P G+ G+ G  R  P      G P    
Sbjct: 430 KGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRG-ARGEPGPTGLPGPPGERG 488

Query: 247 GPG 249
           GPG
Sbjct: 489 GPG 491


>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 264

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)

Query: 64  CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
           CY   G  RGR+ G+   PR      Q  A + A  AA+ R   A R RR LL     A 
Sbjct: 50  CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 105

Query: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
                 P  P LR+PR         L + G RA   G   +   R   AS+D A   +  
Sbjct: 106 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 165

Query: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
               AR   R     RPG   VP   PG   AA  +ET   A E        SP   A R
Sbjct: 166 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 225

Query: 230 V 230
           +
Sbjct: 226 L 226


>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)

Query: 64  CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
           CY   G  RGR+ G+   PR      Q  A + A  AA+ R   A R RR LL     A 
Sbjct: 44  CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99

Query: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
                 P  P LR+PR         L + G RA   G   +   R   AS+D A   +  
Sbjct: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159

Query: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
               AR   R     RPG   VP   PG   AA  +ET   A E        SP   A R
Sbjct: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 219

Query: 230 V 230
           +
Sbjct: 220 L 220


>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
           PRKX (Protein kinase PKX1) [Homo sapiens]
          Length = 330

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)

Query: 64  CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
           CY   G  RGR+ G+   PR      Q  A + A  AA+ R   A R RR LL     A 
Sbjct: 57  CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 112

Query: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
                 P  P LR+PR         L + G RA   G   +   R   AS+D A   +  
Sbjct: 113 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 172

Query: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
               AR   R     RPG   VP   PG   AA  +ET   A E        SP   A R
Sbjct: 173 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 232

Query: 230 V 230
           +
Sbjct: 233 L 233



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 41/139 (29%), Positives = 52/139 (37%), Gaps = 32/139 (23%)

Query: 129 RPRHRLPGGSRRL---PAPGPR--------------APAPGKGRERELRTGAASIDRAPA 171
           + +H L GG+R     PAP PR                A G+GRE     G     +A A
Sbjct: 23  KAKHSLVGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARA 82

Query: 172 RTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAKDE---TSCAARERGASPRGDAG 228
                  A+R S   PRG R  L      PG +AA A  +    S   R+   + R   G
Sbjct: 83  AAPAFPAASRRSVPAPRGRRLLL------PGAVAACAVSDGQPLSPPLRQPRPAARAPEG 136

Query: 229 RVGRTRAVPSCGAPAVGTG 247
                 A+ SCG  A   G
Sbjct: 137 ------ALASCGLRAGWAG 149


>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 445

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 57/198 (28%), Positives = 77/198 (38%), Gaps = 33/198 (16%)

Query: 77  GDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARP---RLRRPRHR 133
           G L P R  + R+++       A   G  +R +R  + +     GP  P   +LR+ R R
Sbjct: 76  GALPPDRSPTPRSRVSPGVTGLAVGPGNPKRCQRSGVPYE----GPGAPGGQQLRKSRAR 131

Query: 134 LPGGSRRLPAPGPRAPAPGKGRERE------LRTGAASIDRAPARTGPEDLAARASTRRP 187
           LP        PG R  A  +GR R+      LR  +      PAR G   +   A  RR 
Sbjct: 132 LPR-----TRPG-REDAAVRGRNRDPAEPGSLRPTSLGF---PARAGQGQVQGAAPGRRL 182

Query: 188 RGFRPGLPVPTAPPGGLAAAAKDETSCAARERGA--SPRGDAGRVGRTRAVPSCGAP--- 242
           RG     P  + P GG+ + A    + A  + GA  S R   G   R    P  G P   
Sbjct: 183 RGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGPGPPARLPPAPP-GPPLRP 241

Query: 243 -----AVGTGPGRLRGCK 255
                    GPGRL  C+
Sbjct: 242 ARPHNPTSRGPGRLLTCE 259


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 65/269 (24%), Positives = 93/269 (34%), Gaps = 50/269 (18%)

Query: 31  YNYLGLQPSAGSSFPRVFGLSR--SPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSAR 88
           ++ L L+PS   + P   G  R    G L    LG    P  R G       PPR    +
Sbjct: 186 HDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPG-PPDPPPPPRHLPTQ 244

Query: 89  TQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPR-------HRLPGGSRRL 141
             L+A+S+A AAAA ++      L  +   A GP  P    PR       ++ P  ++  
Sbjct: 245 FNLLASSSAAAAAAEQSSPQ---LYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPP 301

Query: 142 PAPGPR------------------------------APAPGKGRERELRTGAASIDRAPA 171
           P P P                                P+PG G   +     A+   +  
Sbjct: 302 PPPPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASGR 361

Query: 172 RTGPEDLAARASTRRPRGFRPGLPVP--TAPPGGLAAAAKDETSCAARERGASPR----- 224
            TGPE      +     G+RP +  P      GG  AAA   T        A+P+     
Sbjct: 362 ATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQSLG 421

Query: 225 GDAGRVGRTRAVPSCGAPAVGTGPGRLRG 253
           G A      +A  + GA      PG+ +G
Sbjct: 422 GPAAAYATGKASGAGGAGGQAYSPGQPQG 450


>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 66/240 (27%), Positives = 79/240 (32%), Gaps = 50/240 (20%)

Query: 38  PSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAA 97
           P A    P   G SRS  P   +  G +  PG    R +        G  R    A SAA
Sbjct: 68  PPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAA 127

Query: 98  QAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGK-GRE 156
           Q     RAQ V   L   RT + GPA P                    PRA   G+ G E
Sbjct: 128 QRGGPARAQ-VPPAL---RTFSPGPASP--------------------PRASPGGRPGSE 163

Query: 157 RELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPP-GGLAAAAKDETSCA 215
              R+GA    R P   GP   A+   + R R F+        PP  G++   +     +
Sbjct: 164 ARGRSGAECARRVPLHHGPPG-ASGVGSERDRKFQLHQTPARGPPFPGISGMTRGPVVLS 222

Query: 216 ARER------GASPRGDAGRVGRTRAV-----------------PSCGAPAVGTGPGRLR 252
              R      GASP    G  G  R                   P  G PA   GPG  R
Sbjct: 223 GVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGIPACSIGPGLAR 282



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 45/174 (25%), Positives = 52/174 (29%), Gaps = 59/174 (33%)

Query: 85  GSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSR----- 139
           G  RT     + A  A +GRA             A G      RRPR  +  G+      
Sbjct: 12  GLQRTPAAYANEAALAISGRADE---------EGAAGAGSKLWRRPRGAVSAGAPGSPLY 62

Query: 140 --RLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPR-GFRPGLPV 196
               P P P  P P  G  R                          + RPR G RPG  V
Sbjct: 63  RVSAPPPAPPPPPPPGGPSR--------------------------SERPRAGLRPGAFV 96

Query: 197 PTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGR 250
              P G                R AS  G AG  GR R   +  + A   GP R
Sbjct: 97  SPGPLG----------------RRASCSGRAGSAGRLRCSAAALSAAQRGGPAR 134


>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 66/240 (27%), Positives = 79/240 (32%), Gaps = 50/240 (20%)

Query: 38  PSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAA 97
           P A    P   G SRS  P   +  G +  PG    R +        G  R    A SAA
Sbjct: 68  PPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAA 127

Query: 98  QAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGK-GRE 156
           Q     RAQ V   L   RT + GPA P                    PRA   G+ G E
Sbjct: 128 QRGGPARAQ-VPPAL---RTFSPGPASP--------------------PRASPGGRPGSE 163

Query: 157 RELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPP-GGLAAAAKDETSCA 215
              R+GA    R P   GP   A+   + R R F+        PP  G++   +     +
Sbjct: 164 ARGRSGAECARRVPLHHGPPG-ASGVGSERDRKFQLHQTPARGPPFPGISGMTRGPVVLS 222

Query: 216 ARER------GASPRGDAGRVGRTRAV-----------------PSCGAPAVGTGPGRLR 252
              R      GASP    G  G  R                   P  G PA   GPG  R
Sbjct: 223 GVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGIPACSIGPGLAR 282



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 45/174 (25%), Positives = 52/174 (29%), Gaps = 59/174 (33%)

Query: 85  GSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSR----- 139
           G  RT     + A  A +GRA             A G      RRPR  +  G+      
Sbjct: 12  GLQRTPAAYANEAALAISGRADE---------EGAAGAGSKLWRRPRGAVSAGAPGSPLY 62

Query: 140 --RLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPR-GFRPGLPV 196
               P P P  P P  G  R                          + RPR G RPG  V
Sbjct: 63  RVSAPPPAPPPPPPPGGPSR--------------------------SERPRAGLRPGAFV 96

Query: 197 PTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGR 250
              P G                R AS  G AG  GR R   +  + A   GP R
Sbjct: 97  SPGPLG----------------RRASCSGRAGSAGRLRCSAAALSAAQRGGPAR 134


>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 55/189 (29%), Positives = 65/189 (34%), Gaps = 30/189 (15%)

Query: 76  AGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARP-------RLR 128
           AG      P  AR         Q+ A G++ R RR           P RP         R
Sbjct: 90  AGCCRANAPAPARNPRRKEPRRQSRATGKSARTRRA-------CASPCRPGRHCGPETAR 142

Query: 129 RPRH----RLPGGSRRLPAPGPRAPA----PGKGRERELRTGAASIDR-APARTGPEDLA 179
           RPR        GG+R L  P P        P     R  R  +AS+ +  P         
Sbjct: 143 RPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPRRCRATSASLPQETPFALSVVWAP 202

Query: 180 ARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSC 239
            R S    RG R G+P    PP G  AAA    S A+R    S RG        + VP  
Sbjct: 203 RRRSQGDARGRRTGVPCAKRPPAGWLAAAVTSWSPASRRNPGSLRG-------RKDVPRS 255

Query: 240 GAPAVGTGP 248
            A   G GP
Sbjct: 256 EARPAGRGP 264


>gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 55/189 (29%), Positives = 65/189 (34%), Gaps = 30/189 (15%)

Query: 76  AGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARP-------RLR 128
           AG      P  AR         Q+ A G++ R RR           P RP         R
Sbjct: 90  AGCCRANAPAPARNPRRKEPRRQSRATGKSARTRRA-------CASPCRPGRHCGPETAR 142

Query: 129 RPRH----RLPGGSRRLPAPGPRAPA----PGKGRERELRTGAASIDR-APARTGPEDLA 179
           RPR        GG+R L  P P        P     R  R  +AS+ +  P         
Sbjct: 143 RPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPRRCRATSASLPQETPFALSVVWAP 202

Query: 180 ARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSC 239
            R S    RG R G+P    PP G  AAA    S A+R    S RG        + VP  
Sbjct: 203 RRRSQGDARGRRTGVPCAKRPPAGWLAAAVTSWSPASRRNPGSLRG-------RKDVPRS 255

Query: 240 GAPAVGTGP 248
            A   G GP
Sbjct: 256 EARPAGRGP 264


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 54/164 (32%), Positives = 63/164 (38%), Gaps = 26/164 (15%)

Query: 71  RRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRP 130
           RRGR A   +  R GS R +  + S ++ +  GRA  V  G  ++ T      RP    P
Sbjct: 402 RRGRMAE--ASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPRP----P 455

Query: 131 RHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGF 190
           R       RR PAP   A A G  R        A ID A  R        R   R P   
Sbjct: 456 R------PRRGPAPTLAAQAAGSCRRWR---STAEIDAADGR--------RVRPRAPAAR 498

Query: 191 RPGL-PVPTAPPGGL--AAAAKDETSCAARERGASPRGDAGRVG 231
            PG  P P+AP   L    A  D    A R      RG AG VG
Sbjct: 499 VPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRGPAGGVG 542



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 57/190 (30%), Positives = 70/190 (36%), Gaps = 30/190 (15%)

Query: 66  AVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARP 125
           AVP         +   PRP   R     T AAQAA + R         RWR+TA   A  
Sbjct: 436 AVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCR---------RWRSTAEIDAAD 486

Query: 126 RLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDR--APARTGPEDLAARAS 183
             RR R R P  + R+P PGP   AP    +R L  G A  D   +  R GP        
Sbjct: 487 G-RRVRPRAP--AARVPGPGPSPSAP----QRRLLYGCAGSDSECSAGRLGP------LG 533

Query: 184 TRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPA 243
            R P G   G        G   ++A +  S A     +   G  G V   + V +  A  
Sbjct: 534 RRGPAGGVGG------GYGESESSASEGESPAFSSASSDSDGSGGLVWPQQLVAATAASG 587

Query: 244 VGTGPGRLRG 253
            G G G   G
Sbjct: 588 GGAGAGAPAG 597



 Score = 34.7 bits (78), Expect = 0.10
 Identities = 51/189 (26%), Positives = 70/189 (37%), Gaps = 44/189 (23%)

Query: 74  RQAGDLSPPRPGSART------QLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRL 127
           RQ    + P PGSAR       + V       AA  RA         W ++    A P  
Sbjct: 286 RQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRA---------WASSWESEAAPE- 335

Query: 128 RRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRP 187
                  P      P+P P +PA G+  + +   GA +  R         L  RA+ R+P
Sbjct: 336 -------PAAPPAAPSP-PDSPAEGRLVKAQYIPGAQAATRG--------LPGRAARRKP 379

Query: 188 RGFRPGLPVPTAPP----------GGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVP 237
                G  V  +PP          G +A A+    S  AR+   S + +   +GR  AVP
Sbjct: 380 PPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRS-QSETSLLGRASAVP 438

Query: 238 SCGAPAVGT 246
           S G P   T
Sbjct: 439 S-GPPKYPT 446


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 42/255 (16%)

Query: 38  PSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRRGR----------QAG---DLSPPRP 84
           P   SS  R  G +R PGPL +  L   A   V RG+           AG   D S P P
Sbjct: 102 PGPVSSPGRASGTTR-PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP 160

Query: 85  GSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRL--- 141
           G        T +   A   RA     GL R   +A    RP    PR  +   S      
Sbjct: 161 G--------TPSPAMARRSRAAGTEVGLPRPAPSAR--PRPPTEGPRKSVSSASEHSTTE 210

Query: 142 PAPGPRA-PAPGKGRERELR---TGAASIDRAPARTGPEDLA-----ARASTRRPRGFRP 192
           P+P  R  P+ G G +R      + +A+   +PAR+GP         A  S  +P+G + 
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270

Query: 193 GLPVPTAPPGGLAAAAKDETS---CAARERGASPRGDAGRVGRTRAVPSCGAPAVGT--- 246
             P    PP   AA A    S    A     A P   A    +T   P    P+  T   
Sbjct: 271 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSL 330

Query: 247 GPGRLRGCKSFLCSP 261
           G   L+   SFL SP
Sbjct: 331 GSPTLQATHSFLPSP 345



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 59/232 (25%), Positives = 71/232 (30%), Gaps = 43/232 (18%)

Query: 45  PRVFGLSRSPGPLVRVALGCYAVPGV--------RRGRQAGDLSP---PRPGSARTQLVA 93
           PR  G  R P P+   AL      G         R G   G   P   PR G  RT    
Sbjct: 27  PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPP 86

Query: 94  -------------TSAAQAAAAGRAQRVRRG---------LLRWRTTALGPARPRLRRPR 131
                        TS    ++ GRA    R          +    T A G A    +R  
Sbjct: 87  ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSA 146

Query: 132 HRLPGGSRRL---PAPGPRAPAPGK-----GRERELRTGAASIDRAPARTGPEDLAARAS 183
             L  G+RR    P PG  +PA  +     G E  L   A S    P   GP    + AS
Sbjct: 147 --LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS 204

Query: 184 TRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRA 235
                   P      +  GGL   A    S +A    +  R      G  RA
Sbjct: 205 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRA 256


>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
           sapiens]
          Length = 400

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 66/224 (29%), Positives = 81/224 (36%), Gaps = 57/224 (25%)

Query: 70  VRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRR 129
           +RRG +A     PRP                 AG AQ    G  RW    LGP  PR R 
Sbjct: 109 LRRGSEARKAQTPRP-----------------AGVAQGSGGGGERW-LQGLGP--PRGRG 148

Query: 130 PRHRLPGGSRRL----PAPGPRAPAPGKGR-----------------ERELRTGAASIDR 168
                P  S RL    P P P APA GKG                  E+  R  AA+   
Sbjct: 149 LSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRNMAAAPLG 208

Query: 169 APARTGPEDLAARAST----RRPRGFRPGLPVPTAPPGGL---AAAAKDETSCAARERGA 221
            PAR      AA+A T    RRP    P   +P+AP   +    A  +     A  E  A
Sbjct: 209 DPARE-----AAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQA 263

Query: 222 SPRGDAGRVGRTRAVP----SCGAPAVGTGPGRLRGCKSFLCSP 261
           +    A  + R +  P    +C A   G G GR R  +  +  P
Sbjct: 264 AGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAGP 307



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 36/131 (27%), Positives = 43/131 (32%), Gaps = 26/131 (19%)

Query: 139 RRLPAPGPRAPAPGKGRERELRTGAASIDRAPART-GPEDLAARASTRR----------- 186
           RR PAP PR     +   R    G     RA  R  GP  +A  A + R           
Sbjct: 274 RRKPAPCPRGACAARLGGR----GTGRARRAEFRVAGPRGVAEEAESGRGWRSWPSFSAV 329

Query: 187 --------PRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPS 238
                   P G   G   P  PP     A ++    +AR  G   R   GR G  R    
Sbjct: 330 SGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPGDRRGDGRFGGGRGAEG 389

Query: 239 CGA--PAVGTG 247
            G+  P  G G
Sbjct: 390 AGSGLPRGGRG 400


>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
           sapiens]
          Length = 400

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 66/224 (29%), Positives = 81/224 (36%), Gaps = 57/224 (25%)

Query: 70  VRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRR 129
           +RRG +A     PRP                 AG AQ    G  RW    LGP  PR R 
Sbjct: 109 LRRGSEARKAQTPRP-----------------AGVAQGSGGGGERW-LQGLGP--PRGRG 148

Query: 130 PRHRLPGGSRRL----PAPGPRAPAPGKGR-----------------ERELRTGAASIDR 168
                P  S RL    P P P APA GKG                  E+  R  AA+   
Sbjct: 149 LSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRNMAAAPLG 208

Query: 169 APARTGPEDLAARAST----RRPRGFRPGLPVPTAPPGGL---AAAAKDETSCAARERGA 221
            PAR      AA+A T    RRP    P   +P+AP   +    A  +     A  E  A
Sbjct: 209 DPARE-----AAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQA 263

Query: 222 SPRGDAGRVGRTRAVP----SCGAPAVGTGPGRLRGCKSFLCSP 261
           +    A  + R +  P    +C A   G G GR R  +  +  P
Sbjct: 264 AGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAGP 307



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 36/131 (27%), Positives = 43/131 (32%), Gaps = 26/131 (19%)

Query: 139 RRLPAPGPRAPAPGKGRERELRTGAASIDRAPART-GPEDLAARASTRR----------- 186
           RR PAP PR     +   R    G     RA  R  GP  +A  A + R           
Sbjct: 274 RRKPAPCPRGACAARLGGR----GTGRARRAEFRVAGPRGVAEEAESGRGWRSWPSFSAV 329

Query: 187 --------PRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPS 238
                   P G   G   P  PP     A ++    +AR  G   R   GR G  R    
Sbjct: 330 SGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPGDRRGDGRFGGGRGAEG 389

Query: 239 CGA--PAVGTG 247
            G+  P  G G
Sbjct: 390 AGSGLPRGGRG 400


>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 54/198 (27%), Positives = 70/198 (35%), Gaps = 28/198 (14%)

Query: 49  GLSRSPGPLVRVAL-GCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRA-- 105
           G SR P P+ R    G +    V RG +A   +P  P  AR        A  A A R   
Sbjct: 32  GYSRPPSPVGRARRRGTWL--RVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPP 89

Query: 106 QRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAAS 165
           +R   G       A G  R + RRPR          P P PR P P  GR + L   A  
Sbjct: 90  KRPAGGQTGGVEAASGEERSQPRRPRR---------PPPAPRRPRPAPGRRKSLYEAAPL 140

Query: 166 IDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGA---- 221
           + R        +   R+  R  RG        TA  GG   ++   T+     RG     
Sbjct: 141 LTR--------EKGGRSGRRGDRGGSGWSHGHTARVGGTGDSSAGLTTFPGSSRGGFSGR 192

Query: 222 --SPRGDAGRVGRTRAVP 237
              PR +  +    R+ P
Sbjct: 193 EEEPRRERRQPSLQRSTP 210


>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 58/185 (31%), Positives = 71/185 (38%), Gaps = 30/185 (16%)

Query: 54  PGPLVRVALGCYAVPGVRRGRQA-------GDLSPPRPGSARTQLVATSAAQAAAAGRAQ 106
           PG +     G  AV G   GR+        G    P P      L     A AAA   A 
Sbjct: 2   PGGVQAARFGA-AVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAP 60

Query: 107 RVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASI 166
           R R    R   +AL  A+PR R P  +  GG   + +P P A  P          GA ++
Sbjct: 61  RERPAAAR--LSALAAAQPRRRSPGPQ-GGGGGDIASPLPPALQP---------RGAPAV 108

Query: 167 DRAPARTGPEDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAK------DETSCAARER 219
             AP+   P  L AR S+  PR   P  P  P  PP  LAA          + S  ARE+
Sbjct: 109 PAAPS---PGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQ 165

Query: 220 GASPR 224
              PR
Sbjct: 166 EQRPR 170



 Score = 28.9 bits (63), Expect = 5.7
 Identities = 45/166 (27%), Positives = 56/166 (33%), Gaps = 37/166 (22%)

Query: 54  PGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQ--------------- 98
           PGP + VA     + G+R    A     PR   A  +L A +AAQ               
Sbjct: 36  PGPALVVA----GLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGD 91

Query: 99  -AAAAGRAQRVRRGLLRWRTTALGP--ARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGR 155
            A+    A + R         + GP  ARP    PR  LP G  R   P     AP    
Sbjct: 92  IASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPL 151

Query: 156 ERELRTGAASIDRAPARTGPEDLAARASTRRPRG-FRPGLPVPTAP 200
            R L  G+              + AR   +RPR   R G P    P
Sbjct: 152 ARPLPQGS--------------VTAREQEQRPRSRRRAGAPEALGP 183


>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 54/198 (27%), Positives = 70/198 (35%), Gaps = 28/198 (14%)

Query: 49  GLSRSPGPLVRVAL-GCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRA-- 105
           G SR P P+ R    G +    V RG +A   +P  P  AR        A  A A R   
Sbjct: 32  GYSRPPSPVGRARRRGTWL--RVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPP 89

Query: 106 QRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAAS 165
           +R   G       A G  R + RRPR          P P PR P P  GR + L   A  
Sbjct: 90  KRPAGGQTGGVEAASGEERSQPRRPRR---------PPPAPRRPRPAPGRRKSLYEAAPL 140

Query: 166 IDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGA---- 221
           + R        +   R+  R  RG        TA  GG   ++   T+     RG     
Sbjct: 141 LTR--------EKGGRSGRRGDRGGSGWSHGHTARVGGTGDSSAGLTTFPGSSRGGFSGR 192

Query: 222 --SPRGDAGRVGRTRAVP 237
              PR +  +    R+ P
Sbjct: 193 EEEPRRERRQPSLQRSTP 210


>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 58/185 (31%), Positives = 71/185 (38%), Gaps = 30/185 (16%)

Query: 54  PGPLVRVALGCYAVPGVRRGRQA-------GDLSPPRPGSARTQLVATSAAQAAAAGRAQ 106
           PG +     G  AV G   GR+        G    P P      L     A AAA   A 
Sbjct: 2   PGGVQAARFGA-AVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAP 60

Query: 107 RVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASI 166
           R R    R   +AL  A+PR R P  +  GG   + +P P A  P          GA ++
Sbjct: 61  RERPAAAR--LSALAAAQPRRRSPGPQ-GGGGGDIASPLPPALQP---------RGAPAV 108

Query: 167 DRAPARTGPEDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAK------DETSCAARER 219
             AP+   P  L AR S+  PR   P  P  P  PP  LAA          + S  ARE+
Sbjct: 109 PAAPS---PGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQ 165

Query: 220 GASPR 224
              PR
Sbjct: 166 EQRPR 170



 Score = 28.9 bits (63), Expect = 5.7
 Identities = 45/166 (27%), Positives = 56/166 (33%), Gaps = 37/166 (22%)

Query: 54  PGPLVRVALGCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQ--------------- 98
           PGP + VA     + G+R    A     PR   A  +L A +AAQ               
Sbjct: 36  PGPALVVA----GLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGD 91

Query: 99  -AAAAGRAQRVRRGLLRWRTTALGP--ARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGR 155
            A+    A + R         + GP  ARP    PR  LP G  R   P     AP    
Sbjct: 92  IASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPL 151

Query: 156 ERELRTGAASIDRAPARTGPEDLAARASTRRPRG-FRPGLPVPTAP 200
            R L  G+              + AR   +RPR   R G P    P
Sbjct: 152 ARPLPQGS--------------VTAREQEQRPRSRRRAGAPEALGP 183


>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 54/198 (27%), Positives = 70/198 (35%), Gaps = 28/198 (14%)

Query: 49  GLSRSPGPLVRVAL-GCYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRA-- 105
           G SR P P+ R    G +    V RG +A   +P  P  AR        A  A A R   
Sbjct: 32  GYSRPPSPVGRARRRGTWL--RVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPP 89

Query: 106 QRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAAS 165
           +R   G       A G  R + RRPR          P P PR P P  GR + L   A  
Sbjct: 90  KRPAGGQTGGVEAASGEERSQPRRPRR---------PPPAPRRPRPAPGRRKSLYEAAPL 140

Query: 166 IDRAPARTGPEDLAARASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGA---- 221
           + R        +   R+  R  RG        TA  GG   ++   T+     RG     
Sbjct: 141 LTR--------EKGGRSGRRGDRGDSGWSHGHTARVGGTGDSSAGLTTFPGSSRGGFSGR 192

Query: 222 --SPRGDAGRVGRTRAVP 237
              PR +  +    R+ P
Sbjct: 193 EEEPRRERRQPSLQRSTP 210


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 64/217 (29%), Positives = 77/217 (35%), Gaps = 39/217 (17%)

Query: 45  PRVFGLSRSPGPLVRVA-LGCYAVPGVRRGRQAGDLSPPRPGSARTQ--LVATSAAQAAA 101
           P   G ++  GP    A  G    PG   G   G   P  PG+A+T     A   +  AA
Sbjct: 152 PAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAA 211

Query: 102 AGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPA-------PGPRAPAPGKG 154
           A     V  G       AL P       P+   PG   + P        P P AP+P   
Sbjct: 212 APAVSLVNNG-----PAALLPL------PKPAAPGTVIQTPPFVGAAAPPAPAAPSPP-- 258

Query: 155 RERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLP--VPTAPPGGLAAAAKDET 212
                   AA    APA   P    A A+  RP G   G P   P  PP   AAA    +
Sbjct: 259 --------AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP--AAAQNGGS 308

Query: 213 SCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPG 249
           + AA     +  G AG  G+    P  GA A    PG
Sbjct: 309 AGAAPAPAPAAGGPAGVSGQ----PGPGAAAAAPAPG 341



 Score = 32.7 bits (73), Expect = 0.39
 Identities = 54/197 (27%), Positives = 61/197 (30%), Gaps = 60/197 (30%)

Query: 85  GSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAP 144
           GS  +QL A++A     A R   VR         ALG          H + G        
Sbjct: 27  GSLESQLAASAAHHHHLAPRTPEVRAAA----AGALG---------NHVVSGSPAGAAGA 73

Query: 145 GPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRG---FRPGLPVP---- 197
           GP APA G                AP        A RA   RP G    RPG P P    
Sbjct: 74  GPAAPAEG----------------APGAAPEPPPAGRA---RPGGGGPQRPGPPSPRRPL 114

Query: 198 ------------TAPPGGLAAAAKDETSCAARERG--------ASPRGDAGRVGRTRAVP 237
                         PP G A +     + AA   G        A P G A    R    P
Sbjct: 115 VPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGP 174

Query: 238 SCG-APAVGTGPGRLRG 253
             G  P  G GPG+  G
Sbjct: 175 GPGPGPGPGPGPGKPAG 191



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 61/240 (25%), Positives = 77/240 (32%), Gaps = 40/240 (16%)

Query: 55  GPLVRVALGCYAVPG--VRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGL 112
           GP   + L   A PG  ++     G  +PP P +         AA AAA          L
Sbjct: 221 GPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATL 280

Query: 113 LRWRTTALGP--ARPRLRRPRHRLPGGSRRL-----------------PAPGPR--APAP 151
            R      GP  A P +  P     GGS                    P PG    APAP
Sbjct: 281 ARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAP 340

Query: 152 GKGRERELRTGAASIDRAP--ARTGPEDLAA--------RASTRRPRGFRPGLPVPTAPP 201
           G   E   R   A+   A   A +GP   AA        + +   P    P  P P  P 
Sbjct: 341 GVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPP--PAPGTPT 398

Query: 202 GGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRLRGCKSFLCSP 261
           G    AA   T   +R   A+  G      R    P+  AP +   P      ++F   P
Sbjct: 399 GLPKGAAGAVTQSLSRTPTATTSGI-----RATLTPTVLAPRLPQPPQNPTNIQNFQLPP 453


>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
          Length = 1712

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 54/213 (25%), Positives = 73/213 (34%), Gaps = 37/213 (17%)

Query: 38  PSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRRGR----------QAGDLSPPRPGSA 87
           P     +P + G   +PG +    LG   +PG++  R            G L PP P   
Sbjct: 599 PPGDPGYPGIPGTKGTPGEMGPPGLG---LPGLKGQRGFPGDAGLPGPPGFLGPPGPAGT 655

Query: 88  RTQLVATSAAQAAAAG-RAQRVRRGLL---RWRTTALGPARPRLRRPRHRLPGGSRRLPA 143
             Q+   +  + A  G R + ++ G +   +      GP  P   +    +PG +     
Sbjct: 656 PGQIDCDTDVKRAVGGDRQEAIQPGCIGGPKGLPGLPGPPGPTGAKGLRGIPGFAGADGG 715

Query: 144 PGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRP--GLPVPTAPP 201
           PGPR      GRE             P   GP           P G     GLP P  PP
Sbjct: 716 PGPRGLPGDAGRE--------GFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPP 767

Query: 202 GGLAAAAKDETSCAARERGA--SPRGDAGRVGR 232
           G        E        GA   PRGDAG  G+
Sbjct: 768 G--------ERGLPGEVLGAQPGPRGDAGVPGQ 792



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 56/216 (25%), Positives = 72/216 (33%), Gaps = 35/216 (16%)

Query: 45   PRVFGLSRSPGPLVRVALGCYAVPGVRRGRQAGDL-SPPRPGSARTQLVATSAAQAAAAG 103
            P +FGL    GP      G  A+PG +     GD  +P  PG+  T+  A  +      G
Sbjct: 1286 PGIFGLKGYRGP--PGPPGSAALPGSK-----GDTGNPGAPGTPGTKGWAGDSGPQGRPG 1338

Query: 104  RAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGA 163
                             G    +  R      G +    A G R P   KG       GA
Sbjct: 1339 ---------------VFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGF--PGA 1381

Query: 164  ASIDRAPARTG-PEDLAARASTRRPRGFR-----PGLPVPTAPPGGLAAAAKDETSCAAR 217
                 AP   G P+ +A +  T  P+G R     PG   P  PPG          +    
Sbjct: 1382 PGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQG 1441

Query: 218  ERGASP----RGDAGRVGRTRAVPSCGAPAVGTGPG 249
              G S     RGD G +G    +   GAP     PG
Sbjct: 1442 RGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPG 1477


>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
           sapiens]
          Length = 735

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 51/190 (26%), Positives = 69/190 (36%), Gaps = 16/190 (8%)

Query: 68  PGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRL 127
           P    G QAG   P  P ++R+     +  Q+      + V  G      T+LGP  P  
Sbjct: 45  PQAPEGSQAGAEGPSSPEASRSP-ARGAYLQSLEPSSRRWVLGGAKPAEDTSLGPGVPGT 103

Query: 128 RRPR-----HRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARA 182
             P      + +P    R PAP P  P PG         G A    APA   P   A+R 
Sbjct: 104 GEPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESE----GLAPQGAAPA--SPPTKASRT 157

Query: 183 STRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAP 242
            +  P   R  + +   P      + +   +   RER A+P G    + R     S G P
Sbjct: 158 KSPGP-ARRLSIKMKKLPELRRRLSLRGPRAGRERER-AAPAGSV--ISRYHLDSSVGGP 213

Query: 243 AVGTGPGRLR 252
               GPG  R
Sbjct: 214 GPAAGPGGTR 223



 Score = 28.9 bits (63), Expect = 5.7
 Identities = 45/167 (26%), Positives = 62/167 (37%), Gaps = 26/167 (15%)

Query: 34  LGLQPSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRR---------GRQAGDLSPPRP 84
           L  Q +A +S P     ++SPGP  R+++    +P +RR         GR+    +P   
Sbjct: 140 LAPQGAAPASPPTKASRTKSPGPARRLSIKMKKLPELRRRLSLRGPRAGRERERAAPAGS 199

Query: 85  GSARTQLVAT--SAAQAAAAGRAQRVRRGLLRWRTT---ALGPARPRLRRPRHRLPGG-- 137
             +R  L ++      AA  G  +  R G L    +     GP  P   RP    P    
Sbjct: 200 VISRYHLDSSVGGPGPAAGPGGTRSPRAGYLSDGDSPERPAGPPSPTSFRPYEVGPAARA 259

Query: 138 ---------SRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
                    S  L   G   PAPG    R+L         A ARTGP
Sbjct: 260 PPAALWGRLSLHLYGLGGLRPAPG-ATPRDLCCLLQVDGEARARTGP 305


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 63/228 (27%), Positives = 73/228 (32%), Gaps = 45/228 (19%)

Query: 38  PSAGSSFPRVFGLSRSPGPLVRVALGCYAVPGVRR-----GRQAGDLSPPRPGSARTQLV 92
           PS  S  P   G +  PG       G    PG+R      GR     +P   G+      
Sbjct: 635 PSGPSGLPGERGAAGIPG-----GKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGA 689

Query: 93  ATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRL---PGGSRRLPAPGPRAP 149
                +A AAG A               GPA PR   P  R    P G      P   A 
Sbjct: 690 TGDRGEAGAAGPA---------------GPAGPR-GSPGERGEVGPAGPNGFAGPAGAAG 733

Query: 150 APGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFR--------------PGLP 195
            PG   ER  + G    +     TGP   A  A    P G                PG  
Sbjct: 734 QPGAKGERGAK-GPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAA 792

Query: 196 VPTAPPGGLAAAAKDETSCAARERGA-SPRGDAGRVGRTRAVPSCGAP 242
             T PPG    +        A + G   PRGD G VGRT  V + G P
Sbjct: 793 GRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPP 840



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 45/136 (33%), Positives = 52/136 (38%), Gaps = 10/136 (7%)

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRT-GAASIDRAPARTGPEDLA 179
           GP+     R    +PGG      PG R      GR+      GA         TG    A
Sbjct: 637 GPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEA 696

Query: 180 ARASTRRPRGFRPGLP-----VPTAPPGGLAAAAKDETSCAAR-ERGAS-PRGDAGRVGR 232
             A    P G R G P     V  A P G A  A       A+ ERGA  P+G+ G VG 
Sbjct: 697 GAAGPAGPAGPR-GSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGP 755

Query: 233 TRAVPSCGAPAVGTGP 248
           T  V + G PA   GP
Sbjct: 756 TGPVGAAG-PAGPNGP 770



 Score = 37.0 bits (84), Expect = 0.021
 Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 18/120 (15%)

Query: 137 GSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAARASTRRPRGFRPGLPV 196
           G+R LP    R  APG         GA   D +    GP   A    +  P GF PG P 
Sbjct: 214 GARGLPGERGRVGAPGPA-------GARGSDGSVGPVGP---AGPIGSAGPPGF-PGAPG 262

Query: 197 PTAPPGGLA-------AAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPG 249
           P    G +        A  + E           P G+ G  G T A  + G P V   PG
Sbjct: 263 PKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPG 322



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 38/131 (29%), Positives = 44/131 (33%), Gaps = 25/131 (19%)

Query: 121 GPARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180
           GPA P   R    LPG S      GP  P PG      L TGA      P   G      
Sbjct: 274 GPAGPAGPRGEVGLPGLS------GPVGP-PGNPGANGL-TGAKGAAGLPGVAGA----- 320

Query: 181 RASTRRPRGFRPGLPVPTAPPGGLAAAAKDETSCAARERG-ASPRGDAGRVGRTRAVPSC 239
                      PGLP P   PG + AA          E G A  +G++G  G   +    
Sbjct: 321 -----------PGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQ 369

Query: 240 GAPAVGTGPGR 250
           G P      G+
Sbjct: 370 GPPGPSGEEGK 380



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 32/117 (27%), Positives = 39/117 (33%), Gaps = 14/117 (11%)

Query: 144 PGPRAPAPGKGRERELRTGAASIDRAPA----RTGPEDLAARASTRRPRGFRP-----GL 194
           PGP       G + E  +        P+    + GP   A  A    P G R      GL
Sbjct: 348 PGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGL 407

Query: 195 PVPTAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRL 251
           P      G +        S  A  RG  P GDAGR G    +   G P     PG +
Sbjct: 408 PGADGRAGVMGPPGSRGASGPAGVRG--PNGDAGRPGEPGLMGPRGLPG---SPGNI 459


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,844,990
Number of Sequences: 37866
Number of extensions: 932792
Number of successful extensions: 6976
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 902
Number of HSP's that attempted gapping in prelim test: 5589
Number of HSP's gapped (non-prelim): 2060
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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