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Search of human proteins with 239748159
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo
sapiens]
(246 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo ... 504 e-143
gi|239753506 PREDICTED: hypothetical protein [Homo sapiens] 371 e-103
gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo ... 371 e-103
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 2e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 43 3e-04
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 43 3e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 43 3e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|188536004 zinc finger protein 469 [Homo sapiens] 42 4e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 41 8e-04
gi|239749325 PREDICTED: hypothetical protein [Homo sapiens] 41 8e-04
gi|239509122 PREDICTED: hypothetical protein [Homo sapiens] 41 8e-04
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 40 0.002
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 39 0.004
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 38 0.007
gi|239754797 PREDICTED: hypothetical protein [Homo sapiens] 38 0.009
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 38 0.009
gi|239743415 PREDICTED: hypothetical protein [Homo sapiens] 38 0.009
gi|26787962 advanced glycosylation end product-specific receptor... 37 0.012
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 37 0.016
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 37 0.016
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 37 0.016
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 37 0.016
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 37 0.016
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 37 0.016
gi|239753916 PREDICTED: hypothetical protein XP_002345830 [Homo ... 37 0.021
>gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo
sapiens]
Length = 246
Score = 504 bits (1299), Expect = e-143
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MTLLKRVRVRAANKPAQAPSPPLKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKL 60
MTLLKRVRVRAANKPAQAPSPPLKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKL
Sbjct: 1 MTLLKRVRVRAANKPAQAPSPPLKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKL 60
Query: 61 LEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRP 120
LEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRP
Sbjct: 61 LEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRP 120
Query: 121 GRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQ 180
GRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQ
Sbjct: 121 GRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQ 180
Query: 181 PQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAG 240
PQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAG
Sbjct: 181 PQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAG 240
Query: 241 RHSDSD 246
RHSDSD
Sbjct: 241 RHSDSD 246
>gi|239753506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 371 bits (953), Expect = e-103
Identities = 177/178 (99%), Positives = 178/178 (100%)
Query: 69 AEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 128
AEAAPGRGTRSPAW+DPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG
Sbjct: 19 AEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 78
Query: 129 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 188
RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK
Sbjct: 79 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 138
Query: 189 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD 246
VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD
Sbjct: 139 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD 196
>gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo
sapiens]
Length = 196
Score = 371 bits (953), Expect = e-103
Identities = 177/178 (99%), Positives = 178/178 (100%)
Query: 69 AEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 128
AEAAPGRGTRSPAW+DPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG
Sbjct: 19 AEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 78
Query: 129 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 188
RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK
Sbjct: 79 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 138
Query: 189 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD 246
VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD
Sbjct: 139 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD 196
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.5 bits (101), Expect = 2e-04
Identities = 68/237 (28%), Positives = 92/237 (38%), Gaps = 42/237 (17%)
Query: 6 RVRVRAANKPAQAPSPPLKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKLLEHSL 65
RVR +AA A AP+PP + + SP+ A S GR G+ R R+
Sbjct: 344 RVRDKAA---AAAPTPPARGKES---PSPRSAPSSQGRG-GRAAGGAGRRRRRRRRRRRS 396
Query: 66 GTGAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPG 125
+ A A RG R P PR S+R + AR+ + SG + R +P PG PG
Sbjct: 397 RSSASAPRRRGRRRPRPAPPRG-----SSRSLSR--ARSSSDSG---SGRGAPGPGPEPG 446
Query: 126 SAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRS---------AHGPPPLRVAPARVAS 176
S G R +E R +P GRR + GP P + +R S
Sbjct: 447 SERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPS 506
Query: 177 QGR------QPQLP----------ADEKVGEGDWPGGWGEALRPRAGSAAASTDRGR 217
+ R +P P + +K GEG EA R R S + S R R
Sbjct: 507 KSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKR 563
Score = 39.3 bits (90), Expect = 0.003
Identities = 57/222 (25%), Positives = 74/222 (33%), Gaps = 39/222 (17%)
Query: 37 AAFSPSSSLGRKGSNIGQLRPRKLLEHSLGTGAEAAPGRGTRSPA----WNDPRRRW--- 89
++ SPS S S K + TG++ + G + SP+ W P+R
Sbjct: 259 SSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSG 318
Query: 90 LRFSARGVEAGGAR-----------------AVAKSGLLGTWRASPRPGRGPGSAGR--- 129
R A G G A A A + SP P P S GR
Sbjct: 319 QRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGR 378
Query: 130 -CGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPP-------LRVAPARVASQGRQP 181
G + R R R RR PR GRR PP R + + GR
Sbjct: 379 AAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGA 438
Query: 182 QLPADEKVGEGDWPGGWGEALR---PRAGSAAASTDRGRWGK 220
P E G GG G+ + PRA A+ S G G+
Sbjct: 439 PGPGPEP-GSERGHGGHGKRAKERPPRARPASTSPSPGAHGR 479
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 42.7 bits (99), Expect = 3e-04
Identities = 58/191 (30%), Positives = 70/191 (36%), Gaps = 29/191 (15%)
Query: 39 FSPSSSLGRKGSNI----GQLRPRKLLEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSA 94
FSP S+ G + S + RP H G GT A + S
Sbjct: 59 FSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSR 118
Query: 95 RGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRR----QEVGP 150
A G R S RASP P P +A R P A + R +VG
Sbjct: 119 LRPAAPGPRPGCSSA-----RASPAPA-APQAAARTAPGRAASGGSGPGSRGQGSDQVGA 172
Query: 151 RTPRLLGRRSAHGPPPL-----RVAPARVASQGRQPQLPADEKVGEGDWP---GGWGEAL 202
R R G+ PPPL R AP R A R+P LP + G G G WG
Sbjct: 173 RPSRAGGQ-----PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGG 227
Query: 203 RPRAGSAAAST 213
P G+AAAS+
Sbjct: 228 GP--GTAAASS 236
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 42.7 bits (99), Expect = 3e-04
Identities = 52/174 (29%), Positives = 67/174 (38%), Gaps = 12/174 (6%)
Query: 8 RVRAANKPAQAPSPP----LKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKL--- 60
R + + P + P P L++ A + ++ Q + R + G LRP L
Sbjct: 59 RCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFP 118
Query: 61 LEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAG-GARAVAKSGLLGTWRASPR 119
G AAPGR R P R + GV +G G RA A LG S R
Sbjct: 119 ARAGQGRVQGAAPGRKLRGEPKTPPGRSG---PSGGVRSGAGHRAAAAEHQLGAG-FSVR 174
Query: 120 PGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPAR 173
G GP + P R AR PR PRTP S PPPL + +R
Sbjct: 175 NGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSR 228
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 42.7 bits (99), Expect = 3e-04
Identities = 58/191 (30%), Positives = 70/191 (36%), Gaps = 29/191 (15%)
Query: 39 FSPSSSLGRKGSNI----GQLRPRKLLEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSA 94
FSP S+ G + S + RP H G GT A + S
Sbjct: 59 FSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSR 118
Query: 95 RGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRR----QEVGP 150
A G R S RASP P P +A R P A + R +VG
Sbjct: 119 LRPAAPGPRPGCSSA-----RASPAPA-APQAAARTAPGRAASGGSGPGSRGQGSDQVGA 172
Query: 151 RTPRLLGRRSAHGPPPL-----RVAPARVASQGRQPQLPADEKVGEGDWP---GGWGEAL 202
R R G+ PPPL R AP R A R+P LP + G G G WG
Sbjct: 173 RPSRAGGQ-----PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGG 227
Query: 203 RPRAGSAAAST 213
P G+AAAS+
Sbjct: 228 GP--GTAAASS 236
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 42.7 bits (99), Expect = 3e-04
Identities = 58/191 (30%), Positives = 70/191 (36%), Gaps = 29/191 (15%)
Query: 39 FSPSSSLGRKGSNI----GQLRPRKLLEHSLGTGAEAAPGRGTRSPAWNDPRRRWLRFSA 94
FSP S+ G + S + RP H G GT A + S
Sbjct: 59 FSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSR 118
Query: 95 RGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRR----QEVGP 150
A G R S RASP P P +A R P A + R +VG
Sbjct: 119 LRPAAPGPRPGCSSA-----RASPAPA-APQAAARTAPGRAASGGSGPGSRGQGSDQVGA 172
Query: 151 RTPRLLGRRSAHGPPPL-----RVAPARVASQGRQPQLPADEKVGEGDWP---GGWGEAL 202
R R G+ PPPL R AP R A R+P LP + G G G WG
Sbjct: 173 RPSRAGGQ-----PPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGG 227
Query: 203 RPRAGSAAAST 213
P G+AAAS+
Sbjct: 228 GP--GTAAASS 236
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/187 (28%), Positives = 69/187 (36%), Gaps = 34/187 (18%)
Query: 47 RKGSNIGQL---RPRKLLEHSLGTGAEAAP--------------GRGTRSPAWNDPRRRW 89
R+ +G+ RPR+ + G+ A+ AP R R P DPR+R
Sbjct: 981 RRNDGLGERPPPRPRRPRTQAPGSRADPAPRVPRAAALPEETRSSRRRRLPPRKDPRKRK 1040
Query: 90 LRFSARGVEAGGARAVAKSGLLGTWRASPR------PGRGPGSAGRCGPSEARHREARVP 143
R A G E K+ L AS P RGPG GR G E R
Sbjct: 1041 ARGGAWGKELILKIVQQKNRLREYDFASESEEDEQPPPRGPGFRGRRGRGEKRKEVELTQ 1100
Query: 144 RRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALR 203
+E P+ PR R+ A G APA P+ P + G G P G +
Sbjct: 1101 GPREDEPQKPRKAARQEAGGDG----APA-------NPEEPGGSRPGPGRSPQARGPSRS 1149
Query: 204 PRAGSAA 210
G+AA
Sbjct: 1150 LETGAAA 1156
Score = 34.7 bits (78), Expect = 0.078
Identities = 42/138 (30%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 22 PLKRCNAVITKS---PQLAAFSPSSSLGRKGSNIGQLRPR-KLLEHSLGTGAEAAPGRGT 77
PLK V +S P L A +P R G R R K L AP +G
Sbjct: 884 PLKSKAGVTPESKAPPPLPAATPDPQTPRPGDRGCPARGRPKTRSLGLAPTEADAPSQGR 943
Query: 78 RSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASP-RPGRGPGSAGRCGPSEAR 136
+ R + L+ + +++GGA + SG G RAS RP R G R P R
Sbjct: 944 QQR-----RGKQLKLFRKDLDSGGAAEGSGSG--GGGRASGLRPRRNDGLGERPPPRPRR 996
Query: 137 HREARVPRRQEVGPRTPR 154
R R + PR PR
Sbjct: 997 PRTQAPGSRADPAPRVPR 1014
Score = 29.3 bits (64), Expect = 3.3
Identities = 37/129 (28%), Positives = 44/129 (34%), Gaps = 11/129 (8%)
Query: 94 ARGVEAGGARAV--AKSGLLGTWRASPRPG--RGPGSAGRCGPSEARHREARVPRRQEVG 149
ARG E G A AK G SPRPG G GS + + + A P +
Sbjct: 3684 ARGTENGMKPATPKAKPGPSSQGSGSPRPGTKTGGGSQPQPASGQLQSETATTPAKPSFP 3743
Query: 150 PRTP---RLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRA 206
R+P RL R A P QG L EK GE G+ P
Sbjct: 3744 SRSPAPERLPARAQAKS---CTKGPREAGEQGPHGSLGPKEK-GESSTKRKKGQVPGPAR 3799
Query: 207 GSAAASTDR 215
+ S R
Sbjct: 3800 SESVGSFGR 3808
Score = 28.5 bits (62), Expect = 5.6
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 40 SPSSSLGRKGSNIGQLRPRKLLEHS-LGTGAEA-APGRGTR-SPA 81
SPS S G+ G+LR R+L E S L A+ + GRG+R SPA
Sbjct: 2595 SPSHSEGKSNKKRGKLRGRRLREESILPVSADVISDGRGSRPSPA 2639
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 41.6 bits (96), Expect = 6e-04
Identities = 52/185 (28%), Positives = 63/185 (34%), Gaps = 21/185 (11%)
Query: 44 SLGRKGSNIGQLRPRKLLEHSLGTGAEAAPGRG------TRSPAWNDPRRRWLRFSARGV 97
+LG G+ G P + + G++ PG G RS AW P R R
Sbjct: 42 TLGPAGARRGHSPPT--VAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAG 99
Query: 98 EAGGARAVAKSGLLGTWRASPRPGRGPGS-------AGRCGPSEARHREARVPRRQEVGP 150
AG G R SP PG GS G S A R VP R+ P
Sbjct: 100 PAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRS--VPARRLPPP 157
Query: 151 RTPRLLGRRSAHGPPPLRVAPARVASQGRQ----PQLPADEKVGEGDWPGGWGEALRPRA 206
LG S P A R S R+ P A G WP G+ A P A
Sbjct: 158 CGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAA 217
Query: 207 GSAAA 211
++ A
Sbjct: 218 AASVA 222
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 41.2 bits (95), Expect = 8e-04
Identities = 44/145 (30%), Positives = 57/145 (39%), Gaps = 21/145 (14%)
Query: 95 RGVEAGGARAVAKS--------GLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQ 146
RG AG + ++ G + + R RPGR G++GR G S+AR R P R
Sbjct: 440 RGARAGETTPLGEARGPCWKARGAVPSGRLRGRPGRVAGASGRRGASQARGGTGRAPARL 499
Query: 147 EVGPRTPRLLGRRSAHG---------PPPLRVAPARVASQG--RQPQLP-ADEKVGEGDW 194
G P +G G P P A V G R LP E++G G
Sbjct: 500 RRGRGMPGRVGNGVGEGRGASEPEGEPEPRARADLEVLQAGFERLQSLPELAERLG-GRC 558
Query: 195 PGGWGEALRPRAGSAAASTDRGRWG 219
PG + RAG AA+ G G
Sbjct: 559 PGQVAHGVLARAGLLAAAARPGLAG 583
Score = 35.0 bits (79), Expect = 0.060
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 132 PSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQP------QLPA 185
P+ + PR E PRL GR +A P PL AP QP L
Sbjct: 756 PASPAASPCQAPRAPEKETEAPRLRGRATAVAPRPLPAAPGFSGLCVLQPFPARSRGLGV 815
Query: 186 DEKVGEGDWPGGWGEALRPRAGSAAASTD 214
+ G PG A PRAG+ A S +
Sbjct: 816 PSQQGPTGSPGCRDRASAPRAGAEAGSME 844
>gi|239749325 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.2 bits (95), Expect = 8e-04
Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 14/142 (9%)
Query: 105 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 164
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 165 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 213
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 214 DRGRWGKLKLRPTRQETFRPAY 235
R P +E RP +
Sbjct: 124 GRAGLYPRAAGPASREPARPTH 145
>gi|239509122 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.2 bits (95), Expect = 8e-04
Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 14/142 (9%)
Query: 105 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 164
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 165 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 213
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 214 DRGRWGKLKLRPTRQETFRPAY 235
R P +E RP +
Sbjct: 124 GRAGLYPRAAGPASREPARPTH 145
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 39.7 bits (91), Expect = 0.002
Identities = 58/185 (31%), Positives = 69/185 (37%), Gaps = 34/185 (18%)
Query: 55 LRPRKLLEHSLGTGAEAA---PGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLL 111
LRP KL+ +G+ P R R A R +L SA G G SGL
Sbjct: 310 LRPEKLVRAGAASGSLVPVKEPAR-FRGMARMSRRDSFLACSAAGRPTG-------SGL- 360
Query: 112 GTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP----PPL 167
PR R P +A SEA AR+ R VG RLL R A GP L
Sbjct: 361 ------PRDPRSPSAAS---VSEASPSRARLSREARVGRGVDRLLERVKACGPFWELAEL 411
Query: 168 RVAPARVASQG-------RQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGK 220
R+ +R A G R+P PA G W L G + RG WG
Sbjct: 412 RLCSSRAAGDGGGAAGFRREPSRPAPVASGV-SWLEAITSELAGGDGDISFCARRG-WGV 469
Query: 221 LKLRP 225
+ L P
Sbjct: 470 VGLGP 474
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 39.3 bits (90), Expect = 0.003
Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 44/161 (27%)
Query: 69 AEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 128
A A G+G R P R AR GGAR G G PR RG
Sbjct: 36 AGLATGKGQRPPGPGRVRAA----QARARRGGGARERPAEGARG-----PRAARGGA--- 83
Query: 129 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 188
R A +P GP P L RR + PL AP+ AS GR P
Sbjct: 84 ---------RAAPMPSSAPRGPTEPAL--RRPSSAERPLAQAPSSSASVGRAP------- 125
Query: 189 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQE 229
G P S A RGR G RP R+E
Sbjct: 126 ----------GAMASPSRSSEATGKPRGRDG----RPRREE 152
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 38.9 bits (89), Expect = 0.004
Identities = 59/219 (26%), Positives = 77/219 (35%), Gaps = 45/219 (20%)
Query: 64 SLGTGAEAAPG---RGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRP 120
SLG G A G+RSP P R + RG GG R + G + +
Sbjct: 60 SLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG--RGRFPCAGSG 117
Query: 121 GRGPGSAGRCGPSEAR------HREARVPRRQEVGPR-TPRLL----------------- 156
GRG S G PS R HR ++ R +E PR +P LL
Sbjct: 118 GRGARSRGCHSPSCCRSSSCAWHRWPQL-RGREADPRASPALLICIAPRPRPALPAALHI 176
Query: 157 GRRSAHGPPPLRVAP----ARVASQGRQ-------PQLPADEKVGEGDWPGGWGEALRPR 205
G R+ G R P A A++GR+ P P + GD P G RP
Sbjct: 177 GARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPT 236
Query: 206 AGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSD 244
A GR G ++ P YL +S+
Sbjct: 237 GRRGAG----GRGGAQRIPPWPLRRLSLQYLGGVSEYSN 271
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 98 EAGGARAVAKSGLLGTWRASPRP----GRGPGSAGRCGPSEARHREARVPRRQEVGPRTP 153
EAGG A G G +A PRP G GPG E E + ++ P
Sbjct: 45 EAGGGGA----GPGGACKAEPRPVAASGGGPGGDEEEDEEEEEEDEEALLEDEDEEPPPA 100
Query: 154 RLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRPR 205
+ LG+ + P P A A++ + PA+ G G GG + L R
Sbjct: 101 QALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGKR 152
>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
Length = 692
Score = 38.1 bits (87), Expect = 0.007
Identities = 46/154 (29%), Positives = 59/154 (38%), Gaps = 17/154 (11%)
Query: 8 RVRAANKPAQAPSPPLKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKLLEHSLGT 67
R+ AA P Q P+ +A + +L P S+ K R R+LLE
Sbjct: 473 RLTAARVPLQRPAAAAASSSAAAAAASKLGGAGPGSA--EKAD-----RHRRLLERRGQA 525
Query: 68 GAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGAR----AVAKSGLLGTWR-ASPRPGR 122
R TR P P RR ++ G AG A A +G GT A RP
Sbjct: 526 SGNPDTLRQTR-PKQPAPLRRAMQGGPAGYRAGLAALRTPPPAPAGNAGTGTGARKRPEG 584
Query: 123 GPGSAGRCGPSEARHREARVPRRQEVGPRTPRLL 156
G G+ CG S VP ++ GPR R L
Sbjct: 585 GRGARYPCGSSS----RVAVPSKEPAGPRAQRNL 614
Score = 31.2 bits (69), Expect = 0.86
Identities = 39/129 (30%), Positives = 45/129 (34%), Gaps = 22/129 (17%)
Query: 91 RFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVG- 149
R +A V A A S AS G GPGSA + RHR R Q G
Sbjct: 473 RLTAARVPLQRPAAAAASSSAAAAAASKLGGAGPGSAEKAD----RHRRLLERRGQASGN 528
Query: 150 --------PRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEA 201
P+ P L R GP R A +A+ P PA G+ G G
Sbjct: 529 PDTLRQTRPKQPAPLRRAMQGGPAGYR---AGLAALRTPPPAPA------GNAGTGTGAR 579
Query: 202 LRPRAGSAA 210
RP G A
Sbjct: 580 KRPEGGRGA 588
>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
sapiens]
Length = 692
Score = 38.1 bits (87), Expect = 0.007
Identities = 46/154 (29%), Positives = 59/154 (38%), Gaps = 17/154 (11%)
Query: 8 RVRAANKPAQAPSPPLKRCNAVITKSPQLAAFSPSSSLGRKGSNIGQLRPRKLLEHSLGT 67
R+ AA P Q P+ +A + +L P S+ K R R+LLE
Sbjct: 473 RLTAARVPLQRPAAAAASSSAAAAAASKLGGAGPGSA--EKAD-----RHRRLLERRGQA 525
Query: 68 GAEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGAR----AVAKSGLLGTWR-ASPRPGR 122
R TR P P RR ++ G AG A A +G GT A RP
Sbjct: 526 SGNPDTLRQTR-PKQPAPLRRAMQGGPAGYRAGLAALRTPPPAPAGNAGTGTGARKRPEG 584
Query: 123 GPGSAGRCGPSEARHREARVPRRQEVGPRTPRLL 156
G G+ CG S VP ++ GPR R L
Sbjct: 585 GRGARYPCGSSS----RVAVPSKEPAGPRAQRNL 614
Score = 31.2 bits (69), Expect = 0.86
Identities = 39/129 (30%), Positives = 45/129 (34%), Gaps = 22/129 (17%)
Query: 91 RFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVG- 149
R +A V A A S AS G GPGSA + RHR R Q G
Sbjct: 473 RLTAARVPLQRPAAAAASSSAAAAAASKLGGAGPGSAEKAD----RHRRLLERRGQASGN 528
Query: 150 --------PRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEA 201
P+ P L R GP R A +A+ P PA G+ G G
Sbjct: 529 PDTLRQTRPKQPAPLRRAMQGGPAGYR---AGLAALRTPPPAPA------GNAGTGTGAR 579
Query: 202 LRPRAGSAA 210
RP G A
Sbjct: 580 KRPEGGRGA 588
>gi|239754797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 37.7 bits (86), Expect = 0.009
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 105 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 164
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 165 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 213
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 214 DR 215
R
Sbjct: 124 GR 125
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 37.7 bits (86), Expect = 0.009
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 115 RASPRPGRGPGS-AGRCGPSEARHREARVPRRQEV------GPRTPRLLGRRSAHGPPPL 167
R + +PG G GS A R GP E R R+ + R++ G R GRR
Sbjct: 763 RGAGQPGPGSGSGAERAGP-ERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
Query: 168 RVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGS-AAASTDRGRWGKLKLRPT 226
R A SQG + + + GE P A RP S AAA + RG WG RP+
Sbjct: 822 R---AGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPS 878
Query: 227 R 227
R
Sbjct: 879 R 879
>gi|239743415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 37.7 bits (86), Expect = 0.009
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 105 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 164
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 165 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 213
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 214 DR 215
R
Sbjct: 124 GR 125
>gi|26787962 advanced glycosylation end product-specific receptor
isoform 2 precursor [Homo sapiens]
Length = 342
Score = 37.4 bits (85), Expect = 0.012
Identities = 35/99 (35%), Positives = 41/99 (41%), Gaps = 16/99 (16%)
Query: 68 GAEAAPGRGTRS-----PAWNDPRRRWLRFSARGVEAGGARAV---AKSGLLGTWRASPR 119
G APG GT + PA P+ W++ +E G R A L G RA
Sbjct: 232 GGAVAPG-GTVTLTCEVPAQPSPQIHWMK-DVSDLERGAGRTRRGGANCRLCGRIRAG-N 288
Query: 120 PGRGPGSAGRCGPSEARH-----REARVPRRQEVGPRTP 153
GPG GR G S H +A PRR E GPR P
Sbjct: 289 SSPGPGDPGRPGDSRPAHWGHLVAKAATPRRGEEGPRKP 327
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 37.0 bits (84), Expect = 0.016
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 19 PSPPLKRCNAVITKSPQLAAFSPSSSLGR-----KGSNIGQLRPR-KLLEHSLGTGAEAA 72
P P R V T + Q AA + + R + + +G RPR + H L G+
Sbjct: 82 PRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRL 141
Query: 73 PGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLG-TWRASPRPGRG--PGSAGR 129
P G R+PA R R LR A ++ RA A++G RAS R RG PG
Sbjct: 142 PAPGPRAPAPGKGRERELRTGAASID----RAPARTGPEDLAARASTRRPRGFRPGLPVP 197
Query: 130 CGP-----SEARHREARVPRRQEVGPR-TPRLLGRRSA---HGPPPLRVAPARV 174
P + A+ + R + PR +GR A G P + P R+
Sbjct: 198 TAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRL 251
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 37.0 bits (84), Expect = 0.016
Identities = 54/202 (26%), Positives = 71/202 (35%), Gaps = 41/202 (20%)
Query: 64 SLGTGAEAAPG---RGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRP 120
SLG G A G+RSP P R + RG GG R + G + +
Sbjct: 60 SLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG--RGRFPCAGSG 117
Query: 121 GRGPGSAGRCGPSEAR------HREARVPRRQEVGPRTPRLL-----------------G 157
GRG S G PS R HR ++ R+ +P LL G
Sbjct: 118 GRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIG 177
Query: 158 RRSAHGPPPLRVAP----ARVASQGRQ-------PQLPADEKVGEGDWPGGWGEALRPRA 206
R+ G R P A A++GR+ P P + GD P G RP
Sbjct: 178 ARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTG 237
Query: 207 GSAAASTDRGRWGKLKLRPTRQ 228
A RG ++ RP R+
Sbjct: 238 RRGAGG--RGGAQRIPPRPLRR 257
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 37.0 bits (84), Expect = 0.016
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 19 PSPPLKRCNAVITKSPQLAAFSPSSSLGR-----KGSNIGQLRPR-KLLEHSLGTGAEAA 72
P P R V T + Q AA + + R + + +G RPR + H L G+
Sbjct: 82 PRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRL 141
Query: 73 PGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLG-TWRASPRPGRG--PGSAGR 129
P G R+PA R R LR A ++ RA A++G RAS R RG PG
Sbjct: 142 PAPGPRAPAPGKGRERELRTGAASID----RAPARTGPEDLAARASTRRPRGFRPGLPVP 197
Query: 130 CGP-----SEARHREARVPRRQEVGPR-TPRLLGRRSA---HGPPPLRVAPARV 174
P + A+ + R + PR +GR A G P + P R+
Sbjct: 198 TAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRL 251
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 37.0 bits (84), Expect = 0.016
Identities = 54/202 (26%), Positives = 71/202 (35%), Gaps = 41/202 (20%)
Query: 64 SLGTGAEAAPG---RGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRP 120
SLG G A G+RSP P R + RG GG R + G + +
Sbjct: 60 SLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG--RGRFPCAGSG 117
Query: 121 GRGPGSAGRCGPSEAR------HREARVPRRQEVGPRTPRLL-----------------G 157
GRG S G PS R HR ++ R+ +P LL G
Sbjct: 118 GRGARSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIG 177
Query: 158 RRSAHGPPPLRVAP----ARVASQGRQ-------PQLPADEKVGEGDWPGGWGEALRPRA 206
R+ G R P A A++GR+ P P + GD P G RP
Sbjct: 178 ARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTG 237
Query: 207 GSAAASTDRGRWGKLKLRPTRQ 228
A RG ++ RP R+
Sbjct: 238 RRGAGG--RGGAQRIPPRPLRR 257
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 37.0 bits (84), Expect = 0.016
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 19 PSPPLKRCNAVITKSPQLAAFSPSSSLGR-----KGSNIGQLRPR-KLLEHSLGTGAEAA 72
P P R V T + Q AA + + R + + +G RPR + H L G+
Sbjct: 82 PRPGSARTQLVATSAAQAAAAGRAQRVRRGLLRWRTTALGPARPRLRRPRHRLPGGSRRL 141
Query: 73 PGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLG-TWRASPRPGRG--PGSAGR 129
P G R+PA R R LR A ++ RA A++G RAS R RG PG
Sbjct: 142 PAPGPRAPAPGKGRERELRTGAASID----RAPARTGPEDLAARASTRRPRGFRPGLPVP 197
Query: 130 CGP-----SEARHREARVPRRQEVGPR-TPRLLGRRSA---HGPPPLRVAPARV 174
P + A+ + R + PR +GR A G P + P R+
Sbjct: 198 TAPPGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRL 251
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 37.0 bits (84), Expect = 0.016
Identities = 43/135 (31%), Positives = 52/135 (38%), Gaps = 20/135 (14%)
Query: 99 AGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGR 158
+GG + G LG+ RA P P G G CG SE R R P R VG R + GR
Sbjct: 27 SGGGGGGDEDGSLGS-RAEPAPRAREG--GGCGRSEVRPVAPRRP-RDAVGQRGAQGAGR 82
Query: 159 RSAHGPPPLRVAP---------ARVASQGRQPQLPADE-------KVGEGDWPGGWGEAL 202
R G PP ++ VA G LP + E D G +A
Sbjct: 83 RRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGWLPESDCETVTCCLFSERDAAGAPRDAS 142
Query: 203 RPRAGSAAASTDRGR 217
P AG+A GR
Sbjct: 143 DPLAGAALEPAGGGR 157
>gi|239753916 PREDICTED: hypothetical protein XP_002345830 [Homo
sapiens]
Length = 233
Score = 36.6 bits (83), Expect = 0.021
Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 67 TGAEAAPGRGT-RSPAWND----PRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPG 121
T E A G+G R W + P R R A AR +SG +G WRA P
Sbjct: 3 TPGEQAGGKGADRCALWKEIHKGPTLR-RRVPGNSTPARRARFPRRSGRVGGWRAQVAPH 61
Query: 122 RGPGSAGRCGPSEARHREARVPR-RQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQ 180
R G + REA + R R R R++ PPP R A A + R
Sbjct: 62 RPAEPLGLLADAAPVQREAGLGRWRWRRRARAVGTCSPRASRAPPPGRPASASPPAASRL 121
Query: 181 P 181
P
Sbjct: 122 P 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,077,844
Number of Sequences: 37866
Number of extensions: 723103
Number of successful extensions: 4326
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 479
Number of HSP's that attempted gapping in prelim test: 3919
Number of HSP's gapped (non-prelim): 853
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.