Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239747889
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757983 PREDICTED: similar to protein-L-isoaspartate (D-asp... 267 2e-72
gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo ... 267 2e-72
gi|190360566 protein-L-isoaspartate (D-aspartate) O-methyltransf... 238 1e-63
gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo ... 233 3e-62
gi|239758102 PREDICTED: similar to protein-L-isoaspartate (D-asp... 220 3e-58
gi|239756570 PREDICTED: similar to protein-L-isoaspartate (D-asp... 214 1e-56
gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo ... 214 1e-56
gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo ... 214 1e-56
gi|157388997 protein-L-isoaspartate (D-aspartate) O-methyltransf... 97 3e-21
gi|157388995 protein-L-isoaspartate (D-aspartate) O-methyltransf... 97 3e-21
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 40 4e-04
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 40 4e-04
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 40 4e-04
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 38 0.002
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 37 0.005
gi|118600967 shroom family member 4 [Homo sapiens] 37 0.006
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 37 0.006
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 37 0.006
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 36 0.008
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 36 0.008
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 35 0.013
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 35 0.022
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 35 0.022
gi|157266334 tubby like protein 1 [Homo sapiens] 35 0.022
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 34 0.029
gi|215422388 death-domain associated protein isoform a [Homo sap... 34 0.029
gi|215422366 death-domain associated protein isoform b [Homo sap... 34 0.029
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 34 0.029
gi|114431236 zinc finger protein 462 [Homo sapiens] 34 0.029
gi|209862789 microtubule associated monoxygenase, calponin and L... 34 0.029
>gi|239757983 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 132
Score = 267 bits (683), Expect = 2e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI
Sbjct: 1 MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
Query: 61 TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE
Sbjct: 61 TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
Query: 121 SLKAYLTYFRDK 132
SLKAYLTYFRDK
Sbjct: 121 SLKAYLTYFRDK 132
>gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
sapiens]
Length = 132
Score = 267 bits (683), Expect = 2e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI
Sbjct: 1 MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
Query: 61 TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE
Sbjct: 61 TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
Query: 121 SLKAYLTYFRDK 132
SLKAYLTYFRDK
Sbjct: 121 SLKAYLTYFRDK 132
>gi|190360566 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 1 [Homo sapiens]
Length = 357
Score = 238 bits (607), Expect = 1e-63
Identities = 116/128 (90%), Positives = 121/128 (94%)
Query: 5 PRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYV 64
P ++G+PP AVRNLQDLA IYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRI TYV
Sbjct: 230 PDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYV 289
Query: 65 FVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA 124
FVGNQLIPQPLDSEEDE+MEEDNKEEEEKDH+EAMKPEEPPQNLLREKIMKLPLPESLKA
Sbjct: 290 FVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKA 349
Query: 125 YLTYFRDK 132
YLTYFRDK
Sbjct: 350 YLTYFRDK 357
>gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo
sapiens]
Length = 164
Score = 233 bits (595), Expect = 3e-62
Identities = 121/146 (82%), Positives = 122/146 (83%), Gaps = 14/146 (9%)
Query: 1 MREHPRALGIPPS--------------AVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQR 46
M EHPRALG PPS VRNLQDLA IYIR TLR F NDEMQAKGIPQR
Sbjct: 19 MHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQR 78
Query: 47 APPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
APPKRKRKR KQRITTYVFVGNQLIPQPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ
Sbjct: 79 APPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQ 138
Query: 107 NLLREKIMKLPLPESLKAYLTYFRDK 132
NLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 139 NLLTEKIMKLTLPESLKAYLTYFRDK 164
>gi|239758102 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 118
Score = 220 bits (560), Expect = 3e-58
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 17 NLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLD 76
NLQDLA IYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRITTYVFVGNQLIPQPLD
Sbjct: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
Query: 77 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQNLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
>gi|239756570 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 150
Score = 214 bits (546), Expect = 1e-56
Identities = 109/118 (92%), Positives = 109/118 (92%)
Query: 15 VRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP 74
VRNLQDLALIYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRIT YV V NQLI QP
Sbjct: 33 VRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQP 92
Query: 75 LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ LL EKIMKLPLPESLKAYLTYFRDK
Sbjct: 93 LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150
>gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo
sapiens]
Length = 150
Score = 214 bits (546), Expect = 1e-56
Identities = 109/118 (92%), Positives = 109/118 (92%)
Query: 15 VRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP 74
VRNLQDLALIYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRIT YV V NQLI QP
Sbjct: 33 VRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQP 92
Query: 75 LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ LL EKIMKLPLPESLKAYLTYFRDK
Sbjct: 93 LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150
>gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo
sapiens]
Length = 150
Score = 214 bits (546), Expect = 1e-56
Identities = 109/118 (92%), Positives = 109/118 (92%)
Query: 15 VRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP 74
VRNLQDLALIYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRIT YV V NQLI QP
Sbjct: 33 VRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQP 92
Query: 75 LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ LL EKIMKLPLPESLKAYLTYFRDK
Sbjct: 93 LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150
>gi|157388997 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 2 [Homo
sapiens]
Length = 334
Score = 97.4 bits (241), Expect = 3e-21
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 6 RALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAK-GIPQRAPPKRKRKRAKQR-ITTY 63
R + +PP AVR+LQDLA I IR T++K + E +K G + P+ KR+R ++R + T
Sbjct: 204 RLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 263
Query: 64 VFVGNQL----IPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
VF+ ++ I P D E++EE+ +EEEEK E KP+ PP N LR+K++ LPLP
Sbjct: 264 VFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLP 321
Query: 120 ESLKAYLTYFRDK 132
+ LK YL Y+R+K
Sbjct: 322 DPLKYYLLYYREK 334
>gi|157388995 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 1 [Homo
sapiens]
Length = 361
Score = 97.4 bits (241), Expect = 3e-21
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 6 RALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAK-GIPQRAPPKRKRKRAKQR-ITTY 63
R + +PP AVR+LQDLA I IR T++K + E +K G + P+ KR+R ++R + T
Sbjct: 231 RLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 290
Query: 64 VFVGNQL----IPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
VF+ ++ I P D E++EE+ +EEEEK E KP+ PP N LR+K++ LPLP
Sbjct: 291 VFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLP 348
Query: 120 ESLKAYLTYFRDK 132
+ LK YL Y+R+K
Sbjct: 349 DPLKYYLLYYREK 361
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 40.4 bits (93), Expect = 4e-04
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA----YLTYFRD 131
+ EEDEE KE+EEK+ EA + E+ + L E ++++ LPES+K L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948
Query: 132 K 132
+
Sbjct: 1949 Q 1949
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 40.4 bits (93), Expect = 4e-04
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA----YLTYFRD 131
+ EEDEE KE+EEK+ EA + E+ + L E ++++ LPES+K L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948
Query: 132 K 132
+
Sbjct: 1949 Q 1949
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 40.4 bits (93), Expect = 4e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 74 PLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
P D EEDEE EE+ +EEEE++ E + PP ++ E+ ++ P+
Sbjct: 41 PDDDEEDEEEEEEEEEEEEEEEEEEEEEAPPPPRVVSEEHLRRYAPD 87
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 38.1 bits (87), Expect = 0.002
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLP 117
+ EE+EE EE +EEEE+D EA P PPQ + K+P
Sbjct: 316 EEEEEEEEEEAEEEEEEEDSEEAPPPLSPPQPASPAEEDKMP 357
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 37.0 bits (84), Expect = 0.005
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESL 122
+ EEDEE EE+ +EEEE + E + EE + ++ +L P+S+
Sbjct: 1073 EEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSV 1119
Score = 34.3 bits (77), Expect = 0.029
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 69 QLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
QL+ +S E+EE EED +EEEE++ E + EE
Sbjct: 1060 QLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEE 1094
Score = 32.0 bits (71), Expect = 0.15
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 QLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+L + + EE+EE EE+ +EEEE++ E + EE
Sbjct: 1063 ELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEE 1097
Score = 32.0 bits (71), Expect = 0.15
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EE++E EE+ +EEEE+D E + EE
Sbjct: 1072 EEEEEDEEEEEEEEEEEEDEEEEEEEEE 1099
Score = 31.6 bits (70), Expect = 0.19
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 77 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLK 123
SEE+EE E++ +EEEE++ E + EE + E+ ++ P K
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTK 1115
Score = 30.8 bits (68), Expect = 0.32
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLK 123
+ EE+EE EE+ +EEEE++ E ++ P + +K P LK
Sbjct: 1083 EEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRKRPFVLK 1130
Score = 30.4 bits (67), Expect = 0.42
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLP 117
+ EE+E+ EE+ +EEEE++ E + EE + E I P
Sbjct: 1071 EEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEE--EENIQSSP 1110
Score = 29.6 bits (65), Expect = 0.72
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 73 QPLDSEEDEEMEEDNKEEEEKDHSE 97
+P + EE+EE EE+ +EEEE + E
Sbjct: 1349 KPEEEEEEEEEEEEEEEEEEGEEEE 1373
Score = 28.1 bits (61), Expect = 2.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 72 PQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREK 112
P+ + EE+EE EE+ +EE E++ ++P +EK
Sbjct: 1350 PEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEK 1390
Score = 27.3 bits (59), Expect = 3.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 68 NQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPP 105
+ LI + EE+EE EE+ +EEE ++ E+ P
Sbjct: 1345 DDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDP 1382
Score = 26.9 bits (58), Expect = 4.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLRE 111
D + EE EE+ +EEEE++ E + EE N+ ++
Sbjct: 1346 DLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKD 1381
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 36.6 bits (83), Expect = 0.006
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 44 PQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
P R PP K R Q Q + EE+EE EE+ +EEEE++ +E + E
Sbjct: 1101 PPRPPPPNWEKYRLFRAAQQQKQQQQQQKQQ-EEEEEEEEEEEEEEEEEEEEAEEEEEEL 1159
Query: 104 PPQ 106
PPQ
Sbjct: 1160 PPQ 1162
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 36.6 bits (83), Expect = 0.006
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D+EEDEE++ED +EEEE++ E + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 32.3 bits (72), Expect = 0.11
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D EEDEE+EED +E+EE D + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 30.8 bits (68), Expect = 0.32
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPE 102
D EE+EE EE+ +EEEE++ E + E
Sbjct: 228 DGEEEEEEEEEEEEEEEEEEEEYEQDE 254
Score = 30.0 bits (66), Expect = 0.55
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EE+EE EE+ +EEEE + E + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 29.3 bits (64), Expect = 0.94
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQN 107
+ EE+EE EE+ +EEEE+++ + + ++ N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262
Score = 27.3 bits (59), Expect = 3.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 73 QPLDSEEDEEMEEDNKEEEEKDHSE 97
+ +D + +EE EE+ +EEEE++ E
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEE 247
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 36.6 bits (83), Expect = 0.006
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D+EEDEE++ED +EEEE++ E + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 32.3 bits (72), Expect = 0.11
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D EEDEE+EED +E+EE D + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 30.8 bits (68), Expect = 0.32
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPE 102
D EE+EE EE+ +EEEE++ E + E
Sbjct: 228 DGEEEEEEEEEEEEEEEEEEEEYEQDE 254
Score = 30.0 bits (66), Expect = 0.55
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EE+EE EE+ +EEEE + E + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 29.3 bits (64), Expect = 0.94
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQN 107
+ EE+EE EE+ +EEEE+++ + + ++ N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262
Score = 27.3 bits (59), Expect = 3.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 73 QPLDSEEDEEMEEDNKEEEEKDHSE 97
+ +D + +EE EE+ +EEEE++ E
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEE 247
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 36.2 bits (82), Expect = 0.008
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 31 RKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEE 90
+K E + + + KRKRKR K++ + + EE+EE EE+ KEE
Sbjct: 42 KKKKTKETEKRKEKEEEEKKRKRKRKKKK-------------EEEEREEEEEEEEEEKEE 88
Query: 91 EEKDHSEAMKPEE 103
EEK+ K ++
Sbjct: 89 EEKEEGRRRKKKK 101
Score = 29.6 bits (65), Expect = 0.72
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 50 KRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEM---------EEDNKEEEEKDHSEAMK 100
KRK KR ++R + + + EE+E+ EE+ +EEEE++ E +
Sbjct: 28 KRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKE 87
Query: 101 PEEPPQNLLREKIMK 115
EE + R+K K
Sbjct: 88 EEEKEEGRRRKKKKK 102
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 36.2 bits (82), Expect = 0.008
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLL-REKIMKLPLPESLKAYLTY 128
DSEE+EE EE+ +EEEE++ E + EE + E+ + L PE+ + Y
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIY 911
Score = 30.8 bits (68), Expect = 0.32
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPL 118
D + EE EE+ +E+EE++ E + EE + EK + PL
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPL 897
Score = 30.0 bits (66), Expect = 0.55
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLT 127
+ EE++E EE+ +EEEE+ +E + P+ ++ I LP +LT
Sbjct: 873 EEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLT 924
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 35.4 bits (80), Expect = 0.013
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 20/112 (17%)
Query: 23 LIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEE--- 79
++Y + + RK AK ++ + ++K+ K+ G++L+ +P D EE
Sbjct: 1020 VLYYKASQRKLDG---LAKEEEKKEEMEEEKKQVKEEAKEQC--GDELVAEPADPEEAKS 1074
Query: 80 ------------DEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
+EE EED++EEE+ S PEE L E P P
Sbjct: 1075 TEDQEENEEDKEEEEKEEDSEEEEDDADSSLESPEENNPLRLSESKKSSPTP 1126
Score = 29.6 bits (65), Expect = 0.72
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 67 GNQLIPQPLDSEEDEEMEEDNKEEEEK 93
G L+P + EE+EE EE+ EEEE+
Sbjct: 6 GEVLLPALYEEEEEEEEEEEEVEEEEE 32
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 34.7 bits (78), Expect = 0.022
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 3 EHPRALGIPPSAV--RNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
+HP+ G+ S + +++ D L Y T K + +R KR+ +
Sbjct: 454 QHPKNFGLIASYLERKSVPDCVLYYY------LTKKNENYKALVRRNYGKRRGR------ 501
Query: 61 TTYVFVGNQLIPQPLDSEEDEEMEEDN------KEEEEKDHSEAMKPEEPPQN 107
NQ I +P E+ EE EED KEEE+KD E + E+ +N
Sbjct: 502 -------NQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKEN 547
Score = 32.0 bits (71), Expect = 0.15
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 45 QRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHS-EAMKP-E 102
Q+ K RK ++R + + + + ++EDE++E N+EE +D EA+KP E
Sbjct: 680 QQHKQKTSRKPREERDVSQC----ESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPSE 735
Query: 103 EPPQN 107
+ P+N
Sbjct: 736 DSPEN 740
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 34.7 bits (78), Expect = 0.022
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 72 PQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYL 126
P + EE+EE EE+ +EEEE++ SE + P + E M P E +A++
Sbjct: 311 PTEEEEEEEEEEEEEAEEEEEEEDSEVQGEQPKPASPAEEDKMP-PYDEQTQAFI 364
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 34.7 bits (78), Expect = 0.022
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
Query: 70 LIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE---PPQNLLREK 112
L+ + D+E++EE EE+++E+EE++ E K E+ PP+ LREK
Sbjct: 107 LVARAPDAEDEEEEEEEDEEDEEEEAEE--KKEKILLPPKKPLREK 150
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 34.3 bits (77), Expect = 0.029
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D E+DEE +E+ +EEEE++ EA EE
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEE 463
Score = 29.6 bits (65), Expect = 0.72
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
D EE +E EE+ +EEEE++ +++ + E+ Q
Sbjct: 439 DDEESDEEEEEEEEEEEEEATDSEEEEDLEQ 469
Score = 26.9 bits (58), Expect = 4.7
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 6/31 (19%)
Query: 76 DSEEDEEME------EDNKEEEEKDHSEAMK 100
DSEE+E++E ED++EE+E++ + A K
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 490
Score = 26.2 bits (56), Expect = 8.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 66 VGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSE 97
+ +Q P +E D+E +E++ EEEE++ E
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEE 453
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 34.3 bits (77), Expect = 0.029
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D E+DEE +E+ +EEEE++ EA EE
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEE 463
Score = 29.6 bits (65), Expect = 0.72
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
D EE +E EE+ +EEEE++ +++ + E+ Q
Sbjct: 439 DDEESDEEEEEEEEEEEEEATDSEEEEDLEQ 469
Score = 26.9 bits (58), Expect = 4.7
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 6/31 (19%)
Query: 76 DSEEDEEME------EDNKEEEEKDHSEAMK 100
DSEE+E++E ED++EE+E++ + A K
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 490
Score = 26.2 bits (56), Expect = 8.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 66 VGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSE 97
+ +Q P +E D+E +E++ EEEE++ E
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEE 453
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 34.3 bits (77), Expect = 0.029
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D E+DEE +E+ +EEEE++ EA EE
Sbjct: 448 DDEDDEESDEEEEEEEEEEEEEATDSEE 475
Score = 29.6 bits (65), Expect = 0.72
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
D EE +E EE+ +EEEE++ +++ + E+ Q
Sbjct: 451 DDEESDEEEEEEEEEEEEEATDSEEEEDLEQ 481
Score = 26.9 bits (58), Expect = 4.7
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 6/31 (19%)
Query: 76 DSEEDEEME------EDNKEEEEKDHSEAMK 100
DSEE+E++E ED++EE+E++ + A K
Sbjct: 472 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 502
Score = 26.2 bits (56), Expect = 8.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 66 VGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSE 97
+ +Q P +E D+E +E++ EEEE++ E
Sbjct: 434 MASQGCPSASRAETDDEDDEESDEEEEEEEEE 465
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 34.3 bits (77), Expect = 0.029
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 72 PQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
PQ EE+EE EED +EEEE + E + EE
Sbjct: 727 PQANGKEEEEEEEEDEEEEEEDEEEEEEEEEE 758
Score = 33.5 bits (75), Expect = 0.050
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EEDEE EE+++EEEE++ E + EE
Sbjct: 737 EEEEDEEEEEEDEEEEEEEEEEEEEEEE 764
Score = 33.1 bits (74), Expect = 0.065
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EEDEE EE+ +EEEE++ E + EE
Sbjct: 744 EEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 32.7 bits (73), Expect = 0.085
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
D EE+EE EE+ +EEEE++ E + EE
Sbjct: 741 DEEEEEEDEEEEEEEEEEEEEEEEEEEE 768
Score = 32.0 bits (71), Expect = 0.15
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ E++EE EED +EEEE++ E + EE
Sbjct: 738 EEEDEEEEEEDEEEEEEEEEEEEEEEEE 765
Score = 31.2 bits (69), Expect = 0.25
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESL 122
+ EE++E EE+ EEEE++ E + EE + E + L E L
Sbjct: 736 EEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVL 782
Score = 30.0 bits (66), Expect = 0.55
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EE+EE EE+ +E+EE++ E + EE
Sbjct: 734 EEEEEEEDEEEEEEDEEEEEEEEEEEEE 761
Score = 29.3 bits (64), Expect = 0.94
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EE+EE +E+ +EE+E++ E + EE
Sbjct: 733 EEEEEEEEDEEEEEEDEEEEEEEEEEEE 760
Score = 29.3 bits (64), Expect = 0.94
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 76 DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
+ EE+E+ EE+ ++EEE++ E + EE
Sbjct: 735 EEEEEEDEEEEEEDEEEEEEEEEEEEEE 762
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 73 QPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
QP + ++EE EE+ EEEE++ E + EE
Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEE 756
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 34.3 bits (77), Expect = 0.029
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 25 YIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP---LDSEEDE 81
++ + RK ND P P +KR R + + NQ Q ++ E+DE
Sbjct: 671 FVAKASRKLAND------FPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDE 724
Query: 82 EMEEDNKEEEEKDHSEAMKPEEP 104
E EEDN+ E E + +P EP
Sbjct: 725 EEEEDNEVEIEVELDREEEPTEP 747
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 34.3 bits (77), Expect = 0.029
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 77 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA--YLTYFRDK 132
+EE+EE EE+ +EEEE+D+ E + N +++M P ++A + T+ R++
Sbjct: 991 NEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQVMHAADPLEIQADVHWTHIRER 1048
Score = 27.7 bits (60), Expect = 2.7
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 89 EEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESL--KAYLTYFRDK 132
++E+K E PE+P NLL E K P+SL + Y +DK
Sbjct: 1709 KKEKKSKGEGRPPEKPSSNLLEEAAAK---PKSLWKSVFSGYKKDK 1751
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,160,146
Number of Sequences: 37866
Number of extensions: 323109
Number of successful extensions: 8930
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 3618
Number of HSP's gapped (non-prelim): 3266
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.