Guide to the Human Genome
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Search of human proteins with 239747889

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
sapiens]
         (132 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757983 PREDICTED: similar to protein-L-isoaspartate (D-asp...   267   2e-72
gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo ...   267   2e-72
gi|190360566 protein-L-isoaspartate (D-aspartate) O-methyltransf...   238   1e-63
gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo ...   233   3e-62
gi|239758102 PREDICTED: similar to protein-L-isoaspartate (D-asp...   220   3e-58
gi|239756570 PREDICTED: similar to protein-L-isoaspartate (D-asp...   214   1e-56
gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo ...   214   1e-56
gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo ...   214   1e-56
gi|157388997 protein-L-isoaspartate (D-aspartate) O-methyltransf...    97   3e-21
gi|157388995 protein-L-isoaspartate (D-aspartate) O-methyltransf...    97   3e-21
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ...    40   4e-04
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ...    40   4e-04
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]         40   4e-04
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap...    38   0.002
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    37   0.005
gi|118600967 shroom family member 4 [Homo sapiens]                     37   0.006
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]           37   0.006
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]           37   0.006
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    36   0.008
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    36   0.008
gi|115511012 coiled-coil domain containing 136 [Homo sapiens]          35   0.013
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             35   0.022
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap...    35   0.022
gi|157266334 tubby like protein 1 [Homo sapiens]                       35   0.022
gi|4503257 death-domain associated protein isoform a [Homo sapiens]    34   0.029
gi|215422388 death-domain associated protein isoform a [Homo sap...    34   0.029
gi|215422366 death-domain associated protein isoform b [Homo sap...    34   0.029
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        34   0.029
gi|114431236 zinc finger protein 462 [Homo sapiens]                    34   0.029
gi|209862789 microtubule associated monoxygenase, calponin and L...    34   0.029

>gi|239757983 PREDICTED: similar to protein-L-isoaspartate
           (D-aspartate) O-methyltransferase domain containing 1
           [Homo sapiens]
          Length = 132

 Score =  267 bits (683), Expect = 2e-72
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
           MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI
Sbjct: 1   MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60

Query: 61  TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
           TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE
Sbjct: 61  TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120

Query: 121 SLKAYLTYFRDK 132
           SLKAYLTYFRDK
Sbjct: 121 SLKAYLTYFRDK 132


>gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
           sapiens]
          Length = 132

 Score =  267 bits (683), Expect = 2e-72
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
           MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI
Sbjct: 1   MREHPRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60

Query: 61  TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
           TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE
Sbjct: 61  TTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120

Query: 121 SLKAYLTYFRDK 132
           SLKAYLTYFRDK
Sbjct: 121 SLKAYLTYFRDK 132


>gi|190360566 protein-L-isoaspartate (D-aspartate)
           O-methyltransferase domain containing 1 [Homo sapiens]
          Length = 357

 Score =  238 bits (607), Expect = 1e-63
 Identities = 116/128 (90%), Positives = 121/128 (94%)

Query: 5   PRALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYV 64
           P ++G+PP AVRNLQDLA IYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRI TYV
Sbjct: 230 PDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYV 289

Query: 65  FVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA 124
           FVGNQLIPQPLDSEEDE+MEEDNKEEEEKDH+EAMKPEEPPQNLLREKIMKLPLPESLKA
Sbjct: 290 FVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKA 349

Query: 125 YLTYFRDK 132
           YLTYFRDK
Sbjct: 350 YLTYFRDK 357


>gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo
           sapiens]
          Length = 164

 Score =  233 bits (595), Expect = 3e-62
 Identities = 121/146 (82%), Positives = 122/146 (83%), Gaps = 14/146 (9%)

Query: 1   MREHPRALGIPPS--------------AVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQR 46
           M EHPRALG PPS               VRNLQDLA IYIR TLR F NDEMQAKGIPQR
Sbjct: 19  MHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQR 78

Query: 47  APPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
           APPKRKRKR KQRITTYVFVGNQLIPQPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ
Sbjct: 79  APPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQ 138

Query: 107 NLLREKIMKLPLPESLKAYLTYFRDK 132
           NLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 139 NLLTEKIMKLTLPESLKAYLTYFRDK 164


>gi|239758102 PREDICTED: similar to protein-L-isoaspartate
           (D-aspartate) O-methyltransferase domain containing 1
           [Homo sapiens]
          Length = 118

 Score =  220 bits (560), Expect = 3e-58
 Identities = 109/116 (93%), Positives = 110/116 (94%)

Query: 17  NLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLD 76
           NLQDLA IYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRITTYVFVGNQLIPQPLD
Sbjct: 3   NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62

Query: 77  SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
           SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQNLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 63  SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118


>gi|239756570 PREDICTED: similar to protein-L-isoaspartate
           (D-aspartate) O-methyltransferase domain containing 1
           [Homo sapiens]
          Length = 150

 Score =  214 bits (546), Expect = 1e-56
 Identities = 109/118 (92%), Positives = 109/118 (92%)

Query: 15  VRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP 74
           VRNLQDLALIYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRIT YV V NQLI QP
Sbjct: 33  VRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQP 92

Query: 75  LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
           LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ LL EKIMKLPLPESLKAYLTYFRDK
Sbjct: 93  LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150


>gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo
           sapiens]
          Length = 150

 Score =  214 bits (546), Expect = 1e-56
 Identities = 109/118 (92%), Positives = 109/118 (92%)

Query: 15  VRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP 74
           VRNLQDLALIYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRIT YV V NQLI QP
Sbjct: 33  VRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQP 92

Query: 75  LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
           LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ LL EKIMKLPLPESLKAYLTYFRDK
Sbjct: 93  LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150


>gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo
           sapiens]
          Length = 150

 Score =  214 bits (546), Expect = 1e-56
 Identities = 109/118 (92%), Positives = 109/118 (92%)

Query: 15  VRNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP 74
           VRNLQDLALIYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRIT YV V NQLI QP
Sbjct: 33  VRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQP 92

Query: 75  LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
           LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ LL EKIMKLPLPESLKAYLTYFRDK
Sbjct: 93  LDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150


>gi|157388997 protein-L-isoaspartate (D-aspartate)
           O-methyltransferase domain containing 2 isoform 2 [Homo
           sapiens]
          Length = 334

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 8/133 (6%)

Query: 6   RALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAK-GIPQRAPPKRKRKRAKQR-ITTY 63
           R + +PP AVR+LQDLA I IR T++K  + E  +K G   +  P+ KR+R ++R + T 
Sbjct: 204 RLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 263

Query: 64  VFVGNQL----IPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
           VF+  ++    I  P D    E++EE+ +EEEEK   E  KP+ PP N LR+K++ LPLP
Sbjct: 264 VFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLP 321

Query: 120 ESLKAYLTYFRDK 132
           + LK YL Y+R+K
Sbjct: 322 DPLKYYLLYYREK 334


>gi|157388995 protein-L-isoaspartate (D-aspartate)
           O-methyltransferase domain containing 2 isoform 1 [Homo
           sapiens]
          Length = 361

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 8/133 (6%)

Query: 6   RALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAK-GIPQRAPPKRKRKRAKQR-ITTY 63
           R + +PP AVR+LQDLA I IR T++K  + E  +K G   +  P+ KR+R ++R + T 
Sbjct: 231 RLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 290

Query: 64  VFVGNQL----IPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
           VF+  ++    I  P D    E++EE+ +EEEEK   E  KP+ PP N LR+K++ LPLP
Sbjct: 291 VFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLP 348

Query: 120 ESLKAYLTYFRDK 132
           + LK YL Y+R+K
Sbjct: 349 DPLKYYLLYYREK 361


>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
            sapiens]
          Length = 5033

 Score = 40.4 bits (93), Expect = 4e-04
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA----YLTYFRD 131
            + EEDEE     KE+EEK+  EA + E+  +  L E ++++ LPES+K      L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948

Query: 132  K 132
            +
Sbjct: 1949 Q 1949


>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
            sapiens]
          Length = 5038

 Score = 40.4 bits (93), Expect = 4e-04
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA----YLTYFRD 131
            + EEDEE     KE+EEK+  EA + E+  +  L E ++++ LPES+K      L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948

Query: 132  K 132
            +
Sbjct: 1949 Q 1949


>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
          Length = 224

 Score = 40.4 bits (93), Expect = 4e-04
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 74  PLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPE 120
           P D EEDEE EE+ +EEEE++  E  +   PP  ++ E+ ++   P+
Sbjct: 41  PDDDEEDEEEEEEEEEEEEEEEEEEEEEAPPPPRVVSEEHLRRYAPD 87


>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
           sapiens]
          Length = 528

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLP 117
           + EE+EE EE  +EEEE+D  EA  P  PPQ     +  K+P
Sbjct: 316 EEEEEEEEEEAEEEEEEEDSEEAPPPLSPPQPASPAEEDKMP 357


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 17/47 (36%), Positives = 28/47 (59%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESL 122
            + EEDEE EE+ +EEEE +  E  + EE  +  ++    +L  P+S+
Sbjct: 1073 EEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSV 1119



 Score = 34.3 bits (77), Expect = 0.029
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 69   QLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
            QL+    +S E+EE EED +EEEE++  E  + EE
Sbjct: 1060 QLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEE 1094



 Score = 32.0 bits (71), Expect = 0.15
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 69   QLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
            +L  +  + EE+EE EE+ +EEEE++  E  + EE
Sbjct: 1063 ELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEE 1097



 Score = 32.0 bits (71), Expect = 0.15
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
            + EE++E EE+ +EEEE+D  E  + EE
Sbjct: 1072 EEEEEDEEEEEEEEEEEEDEEEEEEEEE 1099



 Score = 31.6 bits (70), Expect = 0.19
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 77   SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLK 123
            SEE+EE E++ +EEEE++  E  + EE  +    E+ ++   P   K
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTK 1115



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLK 123
            + EE+EE EE+ +EEEE++  E ++   P     +   +K   P  LK
Sbjct: 1083 EEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRKRPFVLK 1130



 Score = 30.4 bits (67), Expect = 0.42
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLP 117
            + EE+E+ EE+ +EEEE++  E  + EE  +    E I   P
Sbjct: 1071 EEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEE--EENIQSSP 1110



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 73   QPLDSEEDEEMEEDNKEEEEKDHSE 97
            +P + EE+EE EE+ +EEEE +  E
Sbjct: 1349 KPEEEEEEEEEEEEEEEEEEGEEEE 1373



 Score = 28.1 bits (61), Expect = 2.1
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 72   PQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREK 112
            P+  + EE+EE EE+ +EE E++       ++P     +EK
Sbjct: 1350 PEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEK 1390



 Score = 27.3 bits (59), Expect = 3.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 68   NQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPP 105
            + LI    + EE+EE EE+ +EEE ++       E+ P
Sbjct: 1345 DDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDP 1382



 Score = 26.9 bits (58), Expect = 4.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)

Query: 76   DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLRE 111
            D  + EE EE+ +EEEE++  E  + EE   N+ ++
Sbjct: 1346 DLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKD 1381


>gi|118600967 shroom family member 4 [Homo sapiens]
          Length = 1493

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 44   PQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
            P R PP    K    R         Q   Q  + EE+EE EE+ +EEEE++ +E  + E 
Sbjct: 1101 PPRPPPPNWEKYRLFRAAQQQKQQQQQQKQQ-EEEEEEEEEEEEEEEEEEEEAEEEEEEL 1159

Query: 104  PPQ 106
            PPQ
Sbjct: 1160 PPQ 1162


>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
          Length = 709

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 15/28 (53%), Positives = 22/28 (78%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D+EEDEE++ED +EEEE++  E  + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245



 Score = 32.3 bits (72), Expect = 0.11
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D EEDEE+EED +E+EE D     + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPE 102
           D EE+EE EE+ +EEEE++  E  + E
Sbjct: 228 DGEEEEEEEEEEEEEEEEEEEEYEQDE 254



 Score = 30.0 bits (66), Expect = 0.55
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EE+EE EE+ +EEEE +  E  + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260



 Score = 29.3 bits (64), Expect = 0.94
 Identities = 11/32 (34%), Positives = 22/32 (68%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQN 107
           + EE+EE EE+ +EEEE+++ +  + ++   N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262



 Score = 27.3 bits (59), Expect = 3.6
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 73  QPLDSEEDEEMEEDNKEEEEKDHSE 97
           + +D + +EE EE+ +EEEE++  E
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEE 247


>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
          Length = 727

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 15/28 (53%), Positives = 22/28 (78%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D+EEDEE++ED +EEEE++  E  + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245



 Score = 32.3 bits (72), Expect = 0.11
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D EEDEE+EED +E+EE D     + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPE 102
           D EE+EE EE+ +EEEE++  E  + E
Sbjct: 228 DGEEEEEEEEEEEEEEEEEEEEYEQDE 254



 Score = 30.0 bits (66), Expect = 0.55
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EE+EE EE+ +EEEE +  E  + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260



 Score = 29.3 bits (64), Expect = 0.94
 Identities = 11/32 (34%), Positives = 22/32 (68%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQN 107
           + EE+EE EE+ +EEEE+++ +  + ++   N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262



 Score = 27.3 bits (59), Expect = 3.6
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 73  QPLDSEEDEEMEEDNKEEEEKDHSE 97
           + +D + +EE EE+ +EEEE++  E
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEE 247


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 123

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 31  RKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEE 90
           +K    E + +   +    KRKRKR K++             +  + EE+EE EE+ KEE
Sbjct: 42  KKKKTKETEKRKEKEEEEKKRKRKRKKKK-------------EEEEREEEEEEEEEEKEE 88

Query: 91  EEKDHSEAMKPEE 103
           EEK+     K ++
Sbjct: 89  EEKEEGRRRKKKK 101



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 50  KRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEM---------EEDNKEEEEKDHSEAMK 100
           KRK KR ++R         +   +  + EE+E+          EE+ +EEEE++  E  +
Sbjct: 28  KRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKE 87

Query: 101 PEEPPQNLLREKIMK 115
            EE  +   R+K  K
Sbjct: 88  EEEKEEGRRRKKKKK 102


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLL-REKIMKLPLPESLKAYLTY 128
           DSEE+EE EE+ +EEEE++  E  + EE  +     E+ + L  PE+ +    Y
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIY 911



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPL 118
           D  + EE EE+ +E+EE++  E  + EE  +    EK  + PL
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPL 897



 Score = 30.0 bits (66), Expect = 0.55
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLT 127
           + EE++E EE+ +EEEE+  +E     + P+   ++ I    LP     +LT
Sbjct: 873 EEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLT 924


>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
          Length = 1154

 Score = 35.4 bits (80), Expect = 0.013
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 20/112 (17%)

Query: 23   LIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEE--- 79
            ++Y + + RK       AK   ++   + ++K+ K+        G++L+ +P D EE   
Sbjct: 1020 VLYYKASQRKLDG---LAKEEEKKEEMEEEKKQVKEEAKEQC--GDELVAEPADPEEAKS 1074

Query: 80   ------------DEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
                        +EE EED++EEE+   S    PEE     L E     P P
Sbjct: 1075 TEDQEENEEDKEEEEKEEDSEEEEDDADSSLESPEENNPLRLSESKKSSPTP 1126



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 67 GNQLIPQPLDSEEDEEMEEDNKEEEEK 93
          G  L+P   + EE+EE EE+  EEEE+
Sbjct: 6  GEVLLPALYEEEEEEEEEEEEVEEEEE 32


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 27/113 (23%)

Query: 3   EHPRALGIPPSAV--RNLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRI 60
           +HP+  G+  S +  +++ D  L Y        T      K + +R   KR+ +      
Sbjct: 454 QHPKNFGLIASYLERKSVPDCVLYYY------LTKKNENYKALVRRNYGKRRGR------ 501

Query: 61  TTYVFVGNQLIPQPLDSEEDEEMEEDN------KEEEEKDHSEAMKPEEPPQN 107
                  NQ I +P   E+ EE EED       KEEE+KD  E  + E+  +N
Sbjct: 502 -------NQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKEN 547



 Score = 32.0 bits (71), Expect = 0.15
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 45  QRAPPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHS-EAMKP-E 102
           Q+   K  RK  ++R  +      + +   + ++EDE++E  N+EE  +D   EA+KP E
Sbjct: 680 QQHKQKTSRKPREERDVSQC----ESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPSE 735

Query: 103 EPPQN 107
           + P+N
Sbjct: 736 DSPEN 740


>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
           sapiens]
          Length = 525

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 72  PQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYL 126
           P   + EE+EE EE+ +EEEE++ SE    +  P +   E  M  P  E  +A++
Sbjct: 311 PTEEEEEEEEEEEEEAEEEEEEEDSEVQGEQPKPASPAEEDKMP-PYDEQTQAFI 364


>gi|157266334 tubby like protein 1 [Homo sapiens]
          Length = 542

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 5/46 (10%)

Query: 70  LIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE---PPQNLLREK 112
           L+ +  D+E++EE EE+++E+EE++  E  K E+   PP+  LREK
Sbjct: 107 LVARAPDAEDEEEEEEEDEEDEEEEAEE--KKEKILLPPKKPLREK 150


>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
          Length = 740

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D E+DEE +E+ +EEEE++  EA   EE
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEE 463



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 12/31 (38%), Positives = 22/31 (70%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
           D EE +E EE+ +EEEE++ +++ + E+  Q
Sbjct: 439 DDEESDEEEEEEEEEEEEEATDSEEEEDLEQ 469



 Score = 26.9 bits (58), Expect = 4.7
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 6/31 (19%)

Query: 76  DSEEDEEME------EDNKEEEEKDHSEAMK 100
           DSEE+E++E      ED++EE+E++ + A K
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 490



 Score = 26.2 bits (56), Expect = 8.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 66  VGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSE 97
           + +Q  P    +E D+E +E++ EEEE++  E
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEE 453


>gi|215422388 death-domain associated protein isoform a [Homo
           sapiens]
          Length = 740

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D E+DEE +E+ +EEEE++  EA   EE
Sbjct: 436 DDEDDEESDEEEEEEEEEEEEEATDSEE 463



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 12/31 (38%), Positives = 22/31 (70%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
           D EE +E EE+ +EEEE++ +++ + E+  Q
Sbjct: 439 DDEESDEEEEEEEEEEEEEATDSEEEEDLEQ 469



 Score = 26.9 bits (58), Expect = 4.7
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 6/31 (19%)

Query: 76  DSEEDEEME------EDNKEEEEKDHSEAMK 100
           DSEE+E++E      ED++EE+E++ + A K
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 490



 Score = 26.2 bits (56), Expect = 8.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 66  VGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSE 97
           + +Q  P    +E D+E +E++ EEEE++  E
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEE 453


>gi|215422366 death-domain associated protein isoform b [Homo
           sapiens]
          Length = 752

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D E+DEE +E+ +EEEE++  EA   EE
Sbjct: 448 DDEDDEESDEEEEEEEEEEEEEATDSEE 475



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 12/31 (38%), Positives = 22/31 (70%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
           D EE +E EE+ +EEEE++ +++ + E+  Q
Sbjct: 451 DDEESDEEEEEEEEEEEEEATDSEEEEDLEQ 481



 Score = 26.9 bits (58), Expect = 4.7
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 6/31 (19%)

Query: 76  DSEEDEEME------EDNKEEEEKDHSEAMK 100
           DSEE+E++E      ED++EE+E++ + A K
Sbjct: 472 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGK 502



 Score = 26.2 bits (56), Expect = 8.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 66  VGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSE 97
           + +Q  P    +E D+E +E++ EEEE++  E
Sbjct: 434 MASQGCPSASRAETDDEDDEESDEEEEEEEEE 465


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 72  PQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           PQ    EE+EE EED +EEEE +  E  + EE
Sbjct: 727 PQANGKEEEEEEEEDEEEEEEDEEEEEEEEEE 758



 Score = 33.5 bits (75), Expect = 0.050
 Identities = 14/28 (50%), Positives = 21/28 (75%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EEDEE EE+++EEEE++  E  + EE
Sbjct: 737 EEEEDEEEEEEDEEEEEEEEEEEEEEEE 764



 Score = 33.1 bits (74), Expect = 0.065
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EEDEE EE+ +EEEE++  E  + EE
Sbjct: 744 EEEEDEEEEEEEEEEEEEEEEEEEEEEE 771



 Score = 32.7 bits (73), Expect = 0.085
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           D EE+EE EE+ +EEEE++  E  + EE
Sbjct: 741 DEEEEEEDEEEEEEEEEEEEEEEEEEEE 768



 Score = 32.0 bits (71), Expect = 0.15
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + E++EE EED +EEEE++  E  + EE
Sbjct: 738 EEEDEEEEEEDEEEEEEEEEEEEEEEEE 765



 Score = 31.2 bits (69), Expect = 0.25
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESL 122
           + EE++E EE+  EEEE++  E  + EE  +    E    + L E L
Sbjct: 736 EEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVL 782



 Score = 30.0 bits (66), Expect = 0.55
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EE+EE EE+ +E+EE++  E  + EE
Sbjct: 734 EEEEEEEDEEEEEEDEEEEEEEEEEEEE 761



 Score = 29.3 bits (64), Expect = 0.94
 Identities = 11/28 (39%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EE+EE +E+ +EE+E++  E  + EE
Sbjct: 733 EEEEEEEEDEEEEEEDEEEEEEEEEEEE 760



 Score = 29.3 bits (64), Expect = 0.94
 Identities = 11/28 (39%), Positives = 20/28 (71%)

Query: 76  DSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           + EE+E+ EE+ ++EEE++  E  + EE
Sbjct: 735 EEEEEEDEEEEEEDEEEEEEEEEEEEEE 762



 Score = 28.9 bits (63), Expect = 1.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query: 73  QPLDSEEDEEMEEDNKEEEEKDHSEAMKPEE 103
           QP  + ++EE EE+  EEEE++  E  + EE
Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEE 756


>gi|114431236 zinc finger protein 462 [Homo sapiens]
          Length = 2506

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 25  YIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQP---LDSEEDE 81
           ++ +  RK  ND       P    P +KR R  +  +      NQ   Q    ++ E+DE
Sbjct: 671 FVAKASRKLAND------FPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDE 724

Query: 82  EMEEDNKEEEEKDHSEAMKPEEP 104
           E EEDN+ E E +     +P EP
Sbjct: 725 EEEEDNEVEIEVELDREEEPTEP 747


>gi|209862789 microtubule associated monoxygenase, calponin and LIM
            domain containing 3 isoform 1 [Homo sapiens]
          Length = 2002

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 77   SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKA--YLTYFRDK 132
            +EE+EE EE+ +EEEE+D+ E  +      N   +++M    P  ++A  + T+ R++
Sbjct: 991  NEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQVMHAADPLEIQADVHWTHIRER 1048



 Score = 27.7 bits (60), Expect = 2.7
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 89   EEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESL--KAYLTYFRDK 132
            ++E+K   E   PE+P  NLL E   K   P+SL    +  Y +DK
Sbjct: 1709 KKEKKSKGEGRPPEKPSSNLLEEAAAK---PKSLWKSVFSGYKKDK 1751


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.133    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,160,146
Number of Sequences: 37866
Number of extensions: 323109
Number of successful extensions: 8930
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 3618
Number of HSP's gapped (non-prelim): 3266
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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