LOC100288089 19377

Name: LOC100288089	Sequence: fasta or formatted (186aa)		NCBI GI: 239747871
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {186aa} PREDICTED: hypothetical protein XP_002342312
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.4 23 2 C cysteine 1.6 3 1 D aspartate 7.5 14 1 E glutamate 9.7 18 2 F phenylalanine 2.2 4 1 G glycine 10.8 20 2 H histidine 2.2 4 1 I isoleucine 0.5 1 1 K lysine 1.1 2 1 L leucine 12.4 23 3 M methionine 1.1 2 1 N asparagine 0.5 1 1 P proline 12.4 23 1 Q glutamine 3.8 7 1 R arginine 1.1 2 1 S serine 4.8 9 1 T threonine 1.6 3 1 V valine 11.8 22 2 W tryptophan 0.5 1 1 Y tyrosine 2.2 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100293529 1.000 PREDICTED: hypothetical protein LOC100288089 1.000 PREDICTED: hypothetical protein XP_002342312 LOC100293055 0.056 PREDICTED: similar to COL22A1 protein COL22A1 0.056 collagen, type XXII, alpha 1 MXRA7 0.031 transmembrane anchor protein 1 isoform 3 MXRA7 0.031 transmembrane anchor protein 1 isoform 2 MXRA7 0.031 transmembrane anchor protein 1 isoform 1 ARVCF 0.028 armadillo repeat protein GNAS 0.023 GNAS complex locus XLas COL5A1 0.023 alpha 1 type V collagen preproprotein LOC100290783 0.020 PREDICTED: hypothetical protein XP_002347614 LOC100288864 0.020 PREDICTED: hypothetical protein XP_002343435 ZFHX2 0.020 PREDICTED: zinc finger homeobox 2 ZFHX2 0.020 PREDICTED: zinc finger homeobox 2 ZFHX2 0.020 PREDICTED: zinc finger homeobox 2 NACAD 0.020 NAC alpha domain containing NACAD 0.020 PREDICTED: NAC alpha domain containing NACAD 0.020 PREDICTED: NAC alpha domain containing NACAD 0.020 PREDICTED: NAC alpha domain containing NACAD 0.020 PREDICTED: NAC alpha domain containing COL2A1 0.017 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.017 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL7A1 0.017 alpha 1 type VII collagen precursor HCN4 0.017 hyperpolarization activated cyclic nucleotide-gated p... COL1A2 0.017 alpha 2 type I collagen COL3A1 0.017 collagen type III alpha 1 preproprotein POLR1A 0.014 DNA-directed RNA polymerase I A COL28A1 0.014 collagen, type XXVIII precursor WDR33 0.014 WD repeat domain 33 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.