BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239747766 PREDICTED: hypothetical protein [Homo sapiens] (331 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239753192 PREDICTED: hypothetical protein [Homo sapiens] 680 0.0 gi|239747766 PREDICTED: hypothetical protein [Homo sapiens] 680 0.0 gi|239741632 PREDICTED: hypothetical protein XP_002342252 [Homo ... 545 e-155 gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 36 0.054 gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27 gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27 gi|34147621 adenosine monophosphate deaminase 2 (isoform L) isof... 33 0.46 gi|21264318 adenosine monophosphate deaminase 2 (isoform L) isof... 33 0.46 gi|30795231 brain abundant, membrane attached signal protein 1 [... 32 0.60 gi|169204510 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0 gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 32 1.0 gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 31 1.7 gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 31 1.7 gi|40548413 dynein 2 light intermediate chain isoform 1 [Homo sa... 31 1.7 gi|29824427 dynein 2 light intermediate chain isoform 2 [Homo sa... 31 1.7 gi|61102732 dynein 2 light intermediate chain isoform 3 [Homo sa... 31 1.7 gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 30 2.3 gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 30 2.3 gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 30 2.3 gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 30 2.3 gi|239753034 PREDICTED: hypothetical protein [Homo sapiens] 30 3.0 gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 30 3.0 gi|239747584 PREDICTED: hypothetical protein [Homo sapiens] 30 3.0 gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 30 3.0 gi|239741451 PREDICTED: hypothetical protein [Homo sapiens] 30 3.0 gi|55750053 atrophin-1 [Homo sapiens] 30 3.9 gi|55750041 atrophin-1 [Homo sapiens] 30 3.9 gi|14249622 ajuba isoform 1 [Homo sapiens] 30 3.9 gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 30 3.9 gi|168229161 coronin 7 [Homo sapiens] 30 3.9 >gi|239753192 PREDICTED: hypothetical protein [Homo sapiens] Length = 331 Score = 680 bits (1755), Expect = 0.0 Identities = 331/331 (100%), Positives = 331/331 (100%) Query: 1 MGHWASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHG 60 MGHWASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHG Sbjct: 1 MGHWASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHG 60 Query: 61 QDKFADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREA 120 QDKFADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREA Sbjct: 61 QDKFADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREA 120 Query: 121 PYHHLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLG 180 PYHHLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLG Sbjct: 121 PYHHLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLG 180 Query: 181 PRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENG 240 PRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENG Sbjct: 181 PRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENG 240 Query: 241 GRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR 300 GRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR Sbjct: 241 GRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR 300 Query: 301 AGESFTKIPPHALAGGRRALPRELSFQNKVC 331 AGESFTKIPPHALAGGRRALPRELSFQNKVC Sbjct: 301 AGESFTKIPPHALAGGRRALPRELSFQNKVC 331 >gi|239747766 PREDICTED: hypothetical protein [Homo sapiens] Length = 331 Score = 680 bits (1755), Expect = 0.0 Identities = 331/331 (100%), Positives = 331/331 (100%) Query: 1 MGHWASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHG 60 MGHWASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHG Sbjct: 1 MGHWASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHG 60 Query: 61 QDKFADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREA 120 QDKFADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREA Sbjct: 61 QDKFADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREA 120 Query: 121 PYHHLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLG 180 PYHHLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLG Sbjct: 121 PYHHLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLG 180 Query: 181 PRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENG 240 PRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENG Sbjct: 181 PRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENG 240 Query: 241 GRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR 300 GRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR Sbjct: 241 GRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR 300 Query: 301 AGESFTKIPPHALAGGRRALPRELSFQNKVC 331 AGESFTKIPPHALAGGRRALPRELSFQNKVC Sbjct: 301 AGESFTKIPPHALAGGRRALPRELSFQNKVC 331 >gi|239741632 PREDICTED: hypothetical protein XP_002342252 [Homo sapiens] Length = 494 Score = 545 bits (1405), Expect = e-155 Identities = 268/268 (100%), Positives = 268/268 (100%) Query: 64 FADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREAPYH 123 FADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREAPYH Sbjct: 227 FADLVRAAVGTASASATVFQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPREAPYH 286 Query: 124 HLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLGPRI 183 HLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLGPRI Sbjct: 287 HLALREVIKAWQNSQESTRVKASGFSLVDGCLFSTPLHLLCSSLIGLRRGPLSHLLGPRI 346 Query: 184 WGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRD 243 WGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRD Sbjct: 347 WGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRD 406 Query: 244 GACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPRAGE 303 GACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPRAGE Sbjct: 407 GACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPRAGE 466 Query: 304 SFTKIPPHALAGGRRALPRELSFQNKVC 331 SFTKIPPHALAGGRRALPRELSFQNKVC Sbjct: 467 SFTKIPPHALAGGRRALPRELSFQNKVC 494 >gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] Length = 5765 Score = 35.8 bits (81), Expect = 0.054 Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 8/126 (6%) Query: 4 WASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSG-HTASTRHGQD 62 W S T TTP TS V+ + G P V A P S T+ T Sbjct: 3893 WISTT-TTPTTSGSTVTPSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLI 3951 Query: 63 KFADLVRAAVGTASASATV----FQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPR 118 A + A T + S+T P T+TTP ST++ S LG T H P P Sbjct: 3952 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTT--HTPPVPN 4009 Query: 119 EAPYHH 124 H Sbjct: 4010 TTATTH 4015 Score = 34.3 bits (77), Expect = 0.16 Identities = 36/126 (28%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 4 WASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSG-HTASTRHGQD 62 W S T TTP T V+ + G P V A P S T+ T Sbjct: 2636 WISTT-TTPTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLT 2694 Query: 63 KFADLVRAAVGTASASATV----FQPPAGLTSTTPFPFLSTISTPSELGLTPSHGEPRPR 118 A + A T + S+T P T+TTP ST++ S LG T H P P Sbjct: 2695 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTT--HTPPVPN 2752 Query: 119 EAPYHH 124 H Sbjct: 2753 TTATTH 2758 Score = 31.2 bits (69), Expect = 1.3 Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 16/134 (11%) Query: 4 WASRTITTPNTSNREVSQAGAGGCICDPDVCFNQKQGKQGPESAVPGSG-HTASTRHGQD 62 W S T TTP T V+ + G V A P S T+ T Sbjct: 3336 WISTT-TTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLT 3394 Query: 63 KFADLVRAAVGTASASATV----FQPPAGLTSTTPFPFLSTISTPSELGLT--------- 109 A + A T + S+T P T+TTP ST++ S LG T Sbjct: 3395 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTT 3454 Query: 110 -PSHGEPRPREAPY 122 +HG P +P+ Sbjct: 3455 ATTHGRSLPPSSPH 3468 >gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] Length = 348 Score = 33.5 bits (75), Expect = 0.27 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 24/125 (19%) Query: 178 LLGPRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGR 237 L+ PR+ RTP R+G+ LP+ R R ++ SG +F G Sbjct: 135 LVAPRVLPRTPQRWTRRGV---------GGRLPQAARSSPRGSKLSGAASPT--AIFPGT 183 Query: 238 ENGGRDGACSIEVLPRTSGRTHPA-PAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSS 296 GR G C+ + R A P PC R A + P KLP++ Sbjct: 184 RGSGRGGGCNCGGGSCSCCRWSMAGPFPCARRATCLASLSPPP------------KLPTA 231 Query: 297 PPPRA 301 P PRA Sbjct: 232 PGPRA 236 >gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] Length = 480 Score = 33.5 bits (75), Expect = 0.27 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 237 RENGGRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAG--GPGFKG 283 RE G +GA L + R PAP P AS RAAG GPGF G Sbjct: 221 REPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHG 269 >gi|34147621 adenosine monophosphate deaminase 2 (isoform L) isoform 2 [Homo sapiens] Length = 798 Score = 32.7 bits (73), Expect = 0.46 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Query: 252 PRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPRAGESFTKIPP- 310 P S R+ P PAPCL+ LR + K + + F R L S A F + P Sbjct: 13 PLQSARSLPGPAPCLKHFPLDLRTSMDGKCKEIAEELFTRSLAESELRSAPYEFPEESPI 72 Query: 311 HALAGGRRALPRELS 325 L R+ L R++S Sbjct: 73 EQLEERRQRLERQIS 87 >gi|21264318 adenosine monophosphate deaminase 2 (isoform L) isoform 1 [Homo sapiens] Length = 879 Score = 32.7 bits (73), Expect = 0.46 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Query: 252 PRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPRAGESFTKIPP- 310 P S R+ P PAPCL+ LR + K + + F R L S A F + P Sbjct: 94 PLQSARSLPGPAPCLKHFPLDLRTSMDGKCKEIAEELFTRSLAESELRSAPYEFPEESPI 153 Query: 311 HALAGGRRALPRELS 325 L R+ L R++S Sbjct: 154 EQLEERRQRLERQIS 168 >gi|30795231 brain abundant, membrane attached signal protein 1 [Homo sapiens] Length = 227 Score = 32.3 bits (72), Expect = 0.60 Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 25/124 (20%) Query: 23 GAGGCICDPDVCFNQKQGKQGP-----------------ESAVPGSGHTASTRHGQDKF- 64 GA +P Q+Q GP ESA P +G S G+ K Sbjct: 92 GAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKT 151 Query: 65 -ADLVRAAVGTASASATVFQPPAGLTST------TPFPFLSTISTPSELGLTPSHGEPRP 117 A AA T S A G + TP + STP G S EP+P Sbjct: 152 EAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPKAQGPAASAEEPKP 211 Query: 118 REAP 121 EAP Sbjct: 212 VEAP 215 >gi|169204510 PREDICTED: hypothetical protein [Homo sapiens] Length = 257 Score = 31.6 bits (70), Expect = 1.0 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 25/160 (15%) Query: 173 GPLSHLLGPRIWGRTPAAALRKGIILARVWTLEKAVLPEKDRKGKRITRGSGTTFTCHFF 232 GP PR W P + R G++L L +++L + R+ + R G+ C Sbjct: 118 GPTPIPRAPRPWRPPPPSPGRVGVLLE---VLPRSLL--QIRRALALGRQRGSYRICANG 172 Query: 233 LFLGRENGGRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRK 292 + + + C +L R G+ +P R A GPG + + R L + Sbjct: 173 FY---KQSRKTPVCCRVLLVRARGKPGCSPR----------RGAAGPGACELGEGRRLPR 219 Query: 293 LPS-SPP--PRAGESFTKIPPHALAGGRRALPRELSFQNK 329 P SPP P + ++ ++PP GGR A P S N+ Sbjct: 220 APGPSPPPLPASADAAGRLPP----GGRLAHPGSASGPNR 255 >gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] Length = 681 Score = 31.6 bits (70), Expect = 1.0 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 22/103 (21%) Query: 34 CFNQKQGK-QGPESAVPGSGHTASTRHGQDKFADLVRAAVGTASASATVFQPPAGLTSTT 92 CF++K+ + + P+ A+ + +D + LV +A + A+ F+ P L Sbjct: 161 CFSEKRARSESPQEALLLPRELGPSMAPEDHYRRLV-----SALSEASTFEDPQRLY--- 212 Query: 93 PFPFLSTISTPSELGLTPSHGEPRPREAPYHHLALREVIKAWQ 135 LGL PSHGE P P HHL ++++ Q Sbjct: 213 ------------HLGL-PSHGEDPPWHDPPHHLPSHDLLRVRQ 242 >gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sapiens] Length = 756 Score = 30.8 bits (68), Expect = 1.7 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 19/97 (19%) Query: 238 ENGGRDGACSIEVLPRTSGRTHPAP-------APCLREAASGLRAAGG--------PGFK 282 E GG DG + ++ P + AP +P L E A G A GG PG + Sbjct: 20 EPGGPDGPGAAQLAPGPAELRLGAPVGGPDPQSPGLDEPAPGAAADGGARWSAGPAPGLE 79 Query: 283 GVIKVRFLRKLPSSPPPRAGESFTKIPPHALAGGRRA 319 G + PS+PPPR+G P A G R+ Sbjct: 80 GGPR----DPGPSAPPPRSGPRGQLASPDAPGPGPRS 112 >gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] Length = 257 Score = 30.8 bits (68), Expect = 1.7 Identities = 29/103 (28%), Positives = 37/103 (35%), Gaps = 20/103 (19%) Query: 2 GHWASRTITTPNTSNREVSQAGAGGCICDP------------DVCFNQKQGKQGPESAVP 49 GH S P S GAGG +C P ++ G GP P Sbjct: 51 GH--SPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAP 108 Query: 50 GSGHTASTRH------GQDKFADLVRAAVGTASASATVFQPPA 86 G G A+TR + A + RA TA++SA PA Sbjct: 109 GRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPA 151 >gi|40548413 dynein 2 light intermediate chain isoform 1 [Homo sapiens] Length = 351 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Query: 201 VWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRDGACSIEVLPRTSGRTHP 260 +W + KA E +++G + G G F F+G +NGG+ ++ R R P Sbjct: 6 LWEIAKA---EVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK-----TTIILRCLDRDEP 57 Query: 261 APAPCLREAASGLRAAG 277 E G RA G Sbjct: 58 PKPTLALEYTYGRRAKG 74 >gi|29824427 dynein 2 light intermediate chain isoform 2 [Homo sapiens] Length = 201 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Query: 201 VWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRDGACSIEVLPRTSGRTHP 260 +W + KA E +++G + G G F F+G +NGG+ ++ R R P Sbjct: 6 LWEIAKA---EVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK-----TTIILRCLDRDEP 57 Query: 261 APAPCLREAASGLRAAG 277 E G RA G Sbjct: 58 PKPTLALEYTYGRRAKG 74 >gi|61102732 dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Query: 201 VWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRDGACSIEVLPRTSGRTHP 260 +W + KA E +++G + G G F F+G +NGG+ ++ R R P Sbjct: 6 LWEIAKA---EVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK-----TTIILRCLDRDEP 57 Query: 261 APAPCLREAASGLRAAG 277 E G RA G Sbjct: 58 PKPTLALEYTYGRRAKG 74 >gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] Length = 1192 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 8/51 (15%) Query: 236 GRENGGRDGACSIEVLPRTSGRT------HPAPAPCLREAASGLRAAGGPG 280 GR GG G+ S P T R PAP PC SG +A GG G Sbjct: 157 GRAGGGIPGSSSPH--PGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKG 205 >gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] Length = 558 Score = 30.4 bits (67), Expect = 2.3 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 16/99 (16%) Query: 23 GAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHGQDKFADLVRAAVGTASASATVF 82 G GG C+P++ G G G +ST + A+ G++S+S++ Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP---------INASTGSSSSSSSSS 148 Query: 83 QPPAGLTSTT-------PFPFLSTISTPSELGLTPSHGE 114 + +S++ P P STPS + TP + E Sbjct: 149 SSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVENTPQNNE 187 >gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] Length = 706 Score = 30.4 bits (67), Expect = 2.3 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 16/99 (16%) Query: 23 GAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHGQDKFADLVRAAVGTASASATVF 82 G GG C+P++ G G G +ST + A+ G++S+S++ Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP---------INASTGSSSSSSSSS 148 Query: 83 QPPAGLTSTT-------PFPFLSTISTPSELGLTPSHGE 114 + +S++ P P STPS + TP + E Sbjct: 149 SSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVENTPQNNE 187 >gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] Length = 504 Score = 30.4 bits (67), Expect = 2.3 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 16/99 (16%) Query: 23 GAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHGQDKFADLVRAAVGTASASATVF 82 G GG C+P++ G G G +ST + A+ G++S+S++ Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP---------INASTGSSSSSSSSS 148 Query: 83 QPPAGLTSTT-------PFPFLSTISTPSELGLTPSHGE 114 + +S++ P P STPS + TP + E Sbjct: 149 SSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVENTPQNNE 187 >gi|239753034 PREDICTED: hypothetical protein [Homo sapiens] Length = 429 Score = 30.0 bits (66), Expect = 3.0 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 15/72 (20%) Query: 255 SGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSP--------PPRAGESFT 306 SGR+ P P L+ +GGPG R L+ P SP P R+GE Sbjct: 364 SGRSRPPPQSLLQTRPERASGSGGPG-------RGLQVPPGSPPGAAPLARPGRSGEGRR 416 Query: 307 KIPPHALAGGRR 318 GGRR Sbjct: 417 DTEARGPVGGRR 428 >gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 12/69 (17%) Query: 260 PAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR----AGESFTKIPPHALAG 315 P P A + AA PG L PSSPPPR +G +PP ALA Sbjct: 95 PLPPALQPRGAPAVPAAPSPGP--------LPARPSSPPPRPSLPSGPHRPVLPPSALAA 146 Query: 316 GRRALPREL 324 R L R L Sbjct: 147 PRPPLARPL 155 >gi|239747584 PREDICTED: hypothetical protein [Homo sapiens] Length = 429 Score = 30.0 bits (66), Expect = 3.0 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 15/72 (20%) Query: 255 SGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSP--------PPRAGESFT 306 SGR+ P P L+ +GGPG R L+ P SP P R+GE Sbjct: 364 SGRSRPPPQSLLQTRPERASGSGGPG-------RGLQVPPGSPPGAAPLARPGRSGEGRR 416 Query: 307 KIPPHALAGGRR 318 GGRR Sbjct: 417 DTEARGPVGGRR 428 >gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] Length = 285 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 12/69 (17%) Query: 260 PAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR----AGESFTKIPPHALAG 315 P P A + AA PG L PSSPPPR +G +PP ALA Sbjct: 95 PLPPALQPRGAPAVPAAPSPGP--------LPARPSSPPPRPSLPSGPHRPVLPPSALAA 146 Query: 316 GRRALPREL 324 R L R L Sbjct: 147 PRPPLARPL 155 >gi|239741451 PREDICTED: hypothetical protein [Homo sapiens] Length = 175 Score = 30.0 bits (66), Expect = 3.0 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 15/72 (20%) Query: 255 SGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSP--------PPRAGESFT 306 SGR+ P P L+ +GGPG R L+ P SP P R+GE Sbjct: 110 SGRSRPPPQSLLQTRPERASGSGGPG-------RGLQVPPGSPPGAAPLARPGRSGEGRR 162 Query: 307 KIPPHALAGGRR 318 GGRR Sbjct: 163 DTEARGPVGGRR 174 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 29.6 bits (65), Expect = 3.9 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 236 GRENGGRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPS 295 G G + G + V G+ HP P + ++SG A+G P K LPS Sbjct: 230 GPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG--ASGAPPTKPPTTPVGGGNLPS 287 Query: 296 SPPP 299 +PPP Sbjct: 288 APPP 291 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 29.6 bits (65), Expect = 3.9 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 236 GRENGGRDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPS 295 G G + G + V G+ HP P + ++SG A+G P K LPS Sbjct: 230 GPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG--ASGAPPTKPPTTPVGGGNLPS 287 Query: 296 SPPP 299 +PPP Sbjct: 288 APPP 291 >gi|14249622 ajuba isoform 1 [Homo sapiens] Length = 538 Score = 29.6 bits (65), Expect = 3.9 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 22 AGAGGCICDPDVCFNQKQGKQGPESAVPGSGHTASTRHGQDKFADLVRAAVGTASASATV 81 AGAG P +++G Q +V G G A QD+ L+R VGT A Sbjct: 242 AGAGVGAAGP----LERRGAQPGRHSVTGYGDCAVGARYQDELTALLRLTVGTGGREAGA 297 Query: 82 FQPPAGLTST----TPFPFL 97 P+G+ + P PF+ Sbjct: 298 RGEPSGIEPSGLEEPPGPFV 317 >gi|158854042 hypothetical protein LOC222183 [Homo sapiens] Length = 653 Score = 29.6 bits (65), Expect = 3.9 Identities = 19/59 (32%), Positives = 25/59 (42%) Query: 242 RDGACSIEVLPRTSGRTHPAPAPCLREAASGLRAAGGPGFKGVIKVRFLRKLPSSPPPR 300 RD A + P G+ P+P G RAAGG G + + R R S+ PR Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPR 404 >gi|168229161 coronin 7 [Homo sapiens] Length = 925 Score = 29.6 bits (65), Expect = 3.9 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 67 LVRAAVGTASASATVFQPPAGLTS-TTPFPFLSTISTPSELGLTPS 111 ++ VG A AS PP+ LTS +TP ++S+ S +G +PS Sbjct: 414 VMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPS 459 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.135 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,833,315 Number of Sequences: 37866 Number of extensions: 857014 Number of successful extensions: 3012 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 47 Number of HSP's that attempted gapping in prelim test: 2975 Number of HSP's gapped (non-prelim): 86 length of query: 331 length of database: 18,247,518 effective HSP length: 103 effective length of query: 228 effective length of database: 14,347,320 effective search space: 3271188960 effective search space used: 3271188960 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.