Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DYNC2LI1 Sequence: fasta or formatted (334aa) NCBI GI: 61102732
Description:

dynein 2 light intermediate chain isoform 3

Referenced in:

Dynein and Dynactin

Other entries for this name:
alt prot [201aa] dynein 2 light intermediate chain isoform 2
alt prot [351aa] dynein 2 light intermediate chain isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         18           1
 C cysteine            0.9          3           1
 D aspartate           6.9         23           1
 E glutamate           6.6         22           1
 F phenylalanine       4.2         14           2
 G glycine             6.6         22           3
 H histidine           2.4          8           1
 I isoleucine          7.8         26           2
 K lysine              9.9         33           2
 L leucine            10.2         34           3
 M methionine          2.4          8           1
 N asparagine          3.9         13           2
 P proline             6.6         22           2
 Q glutamine           2.4          8           1
 R arginine            3.6         12           2
 S serine              6.3         21           1
 T threonine           5.1         17           2
 V valine              5.4         18           1
 W tryptophan          1.5          5           1
 Y tyrosine            2.1          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein 2 light intermediate chain isoform 3 
DYNC2LI1              0.994   dynein 2 light intermediate chain isoform 1 
DYNC2LI1              0.493   dynein 2 light intermediate chain isoform 2 
DYNC1LI1              0.046   dynein, cytoplasmic 1, light intermediate chain 1 [...
DYNC1LI2              0.040   dynein, cytoplasmic, light intermediate polypeptide 2...
DNAH14                0.009   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
LOC100131473          0.009   PREDICTED: hypothetical protein 
LOC100131473          0.009   PREDICTED: hypothetical protein 
LOC100287699          0.009   PREDICTED: hypothetical protein XP_002342252 
ETS2                  0.008   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
EDC3                  0.006   enhancer of mRNA decapping 3 
EDC3                  0.006   enhancer of mRNA decapping 3 
EDC3                  0.006   enhancer of mRNA decapping 3 
FAM120C               0.006   hypothetical protein LOC54954 
DHRS12                0.006   dehydrogenase/reductase (SDR family) member 12 isofo...
DHRS12                0.006   dehydrogenase/reductase (SDR family) member 12 isofo...
EXOC7                 0.005   exocyst complex component 7 isoform 1 
EXOC7                 0.005   exocyst complex component 7 isoform 2 
EXOC7                 0.005   exocyst complex component 7 isoform 6 
EXOC7                 0.005   exocyst complex component 7 isoform 5 
EXOC7                 0.005   exocyst complex component 7 isoform 4 
EXOC7                 0.005   exocyst complex component 7 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press