Guide to the Human Genome
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Name: LOC100287699 Sequence: fasta or formatted (494aa) NCBI GI: 239741632
Description:

PREDICTED: hypothetical protein XP_002342252

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         49           3
 C cysteine            2.4         12           1
 D aspartate           2.8         14           1
 E glutamate           4.9         24           3
 F phenylalanine       4.3         21           2
 G glycine             8.5         42           2
 H histidine           2.8         14           2
 I isoleucine          2.6         13           2
 K lysine              4.9         24           3
 L leucine            10.7         53           2
 M methionine          0.2          1           1
 N asparagine          2.8         14           1
 P proline             8.5         42           3
 Q glutamine           4.9         24           6
 R arginine            7.3         36           2
 S serine              8.3         41           2
 T threonine           7.3         36           2
 V valine              4.5         22           1
 W tryptophan          1.2          6           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002342252 
LOC100131473          0.529   PREDICTED: hypothetical protein 
LOC100131473          0.529   PREDICTED: hypothetical protein 
MAML2                 0.010   mastermind-like 2 
BAT2D1                0.010   HBxAg transactivated protein 2 
LOC100292541          0.008   PREDICTED: hypothetical protein 
LOC100127891          0.008   PREDICTED: hypothetical protein 
FUS                   0.008   fusion (involved in t(12;16) in malignant liposarcoma...
AMPD2                 0.008   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD2                 0.008   adenosine monophosphate deaminase 2 (isoform L) isof...
MLXIP                 0.007   MLX interacting protein 
LOC100131098          0.007   PREDICTED: hypothetical protein 
C11orf30              0.007   EMSY protein 
C2orf71               0.006   hypothetical protein LOC388939 
RAB11FIP3             0.006   rab11-family interacting protein 3 isoform 1 
NUSAP1                0.006   nucleolar and spindle associated protein 1 isoform ...
NUSAP1                0.006   nucleolar and spindle associated protein 1 isoform ...
NUSAP1                0.006   nucleolar and spindle associated protein 1 isoform 2...
DYNC2LI1              0.006   dynein 2 light intermediate chain isoform 1 
DYNC2LI1              0.006   dynein 2 light intermediate chain isoform 2 
DYNC2LI1              0.006   dynein 2 light intermediate chain isoform 3 
FOXL2                 0.005   forkhead box L2 
AGAP2                 0.005   centaurin, gamma 1 isoform PIKE-L 
ADNP2                 0.005   ADNP homeobox 2 
MAP3K1                0.005   mitogen-activated protein kinase kinase kinase 1 [H...
LOC100131192          0.005   PREDICTED: hypothetical protein 
LOC100131102          0.005   PREDICTED: hypothetical protein 
LOC100131192          0.005   PREDICTED: hypothetical protein 
LOC100131102          0.005   PREDICTED: hypothetical protein 
LOC100131192          0.005   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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