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Search of human proteins with 239747580
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens]
(559 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens] 1134 0.0
gi|27262622 neuron navigator 1 [Homo sapiens] 1134 0.0
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens] 542 e-154
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 542 e-154
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 542 e-154
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 542 e-154
gi|169218146 PREDICTED: similar to neuron navigator 3, partial [... 516 e-146
gi|120953251 neuron navigator 3 [Homo sapiens] 516 e-146
gi|239750047 PREDICTED: similar to neuron navigator 2, partial [... 468 e-132
gi|16975496 cortactin binding protein 2 [Homo sapiens] 106 6e-23
gi|11321607 thyroid hormone receptor interactor 13 [Homo sapiens] 34 0.31
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ... 34 0.40
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 33 0.90
gi|5031877 lamin B1 [Homo sapiens] 32 1.2
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 32 1.2
gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo ... 31 2.6
gi|4505725 peroxin1 [Homo sapiens] 31 2.6
gi|156119615 myosin IXA [Homo sapiens] 31 2.6
gi|32454748 origin recognition complex subunit 4 [Homo sapiens] 31 2.6
gi|32454746 origin recognition complex subunit 4 [Homo sapiens] 31 2.6
gi|32454750 origin recognition complex subunit 4 [Homo sapiens] 31 2.6
gi|5031937 calcium binding and coiled-coil domain 2 [Homo sapiens] 31 2.6
gi|27436951 lamin B2 [Homo sapiens] 31 3.4
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 30 4.5
gi|5453802 neural retina leucine zipper [Homo sapiens] 30 5.8
gi|169234742 NACHT and WD repeat domain containing 1 [Homo sapiens] 30 5.8
gi|45439327 periplakin [Homo sapiens] 30 5.8
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 30 7.6
gi|118572611 nucleotide binding protein 1 [Homo sapiens] 30 7.6
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 30 7.6
>gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens]
Length = 559
Score = 1134 bits (2934), Expect = 0.0
Identities = 559/559 (100%), Positives = 559/559 (100%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS
Sbjct: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
Query: 61 ALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLK 120
ALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLK
Sbjct: 61 ALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLK 120
Query: 121 QQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVL 180
QQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVL
Sbjct: 121 QQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVL 180
Query: 181 DAEPPEMPPCRRGVNNISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 240
DAEPPEMPPCRRGVNNISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG
Sbjct: 181 DAEPPEMPPCRRGVNNISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 240
Query: 241 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 300
PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI
Sbjct: 241 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 300
Query: 301 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 360
GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT
Sbjct: 301 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 360
Query: 361 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 420
FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF
Sbjct: 361 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 420
Query: 421 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 480
LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT
Sbjct: 421 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 480
Query: 481 LPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEAAN 540
LPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEAAN
Sbjct: 481 LPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEAAN 540
Query: 541 YIESPDRETILDPNLQATL 559
YIESPDRETILDPNLQATL
Sbjct: 541 YIESPDRETILDPNLQATL 559
>gi|27262622 neuron navigator 1 [Homo sapiens]
Length = 1874
Score = 1134 bits (2934), Expect = 0.0
Identities = 559/559 (100%), Positives = 559/559 (100%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS
Sbjct: 1316 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 1375
Query: 61 ALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLK 120
ALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLK
Sbjct: 1376 ALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGDLK 1435
Query: 121 QQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVL 180
QQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVL
Sbjct: 1436 QQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVL 1495
Query: 181 DAEPPEMPPCRRGVNNISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 240
DAEPPEMPPCRRGVNNISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG
Sbjct: 1496 DAEPPEMPPCRRGVNNISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 1555
Query: 241 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 300
PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI
Sbjct: 1556 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 1615
Query: 301 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 360
GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT
Sbjct: 1616 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 1675
Query: 361 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 420
FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF
Sbjct: 1676 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 1735
Query: 421 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 480
LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT
Sbjct: 1736 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 1795
Query: 481 LPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEAAN 540
LPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEAAN
Sbjct: 1796 LPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEAAN 1855
Query: 541 YIESPDRETILDPNLQATL 559
YIESPDRETILDPNLQATL
Sbjct: 1856 YIESPDRETILDPNLQATL 1874
>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
Length = 1493
Score = 542 bits (1396), Expect = e-154
Identities = 284/578 (49%), Positives = 386/578 (66%), Gaps = 24/578 (4%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
MKLTDIRLEAL+SAHQLDQLRE M+ MQ E++ LKAENDRLK S GS + P
Sbjct: 921 MKLTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLK---SESQGSGCSRAPSQV 977
Query: 61 ALS-SPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVT--LRVVVRMPPQHIIKG 117
++S SPR+S+GL+ HS + + + +D C ++E +++VV + K
Sbjct: 978 SISASPRQSMGLS-QHSLNLTESTSLDMLLDDTGECSARKEGGRHVKIVVSFQEEMKWKE 1036
Query: 118 DLKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVK 177
D + F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +K
Sbjct: 1037 DSRPHLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIK 1096
Query: 178 RVLDAEPPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHR 234
R +E PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HR
Sbjct: 1097 RSNTSETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHR 1156
Query: 235 RLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQI 294
R++LSGPSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q
Sbjct: 1157 RIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQC 1216
Query: 295 DRETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHL 354
+ E D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH
Sbjct: 1217 NSENNAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHH 1276
Query: 355 SFRMLTFSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEK 414
+FR + +N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE
Sbjct: 1277 NFRWVLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEA 1336
Query: 415 HSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPV 474
HS+SD IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP
Sbjct: 1337 HSSSDVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPA 1396
Query: 475 EWVRDTLPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAML 532
+WV DT PW ++ Q + L L P VG + P E T K PS + DPLM ML
Sbjct: 1397 KWVMDTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNML 1456
Query: 533 LKLQEAANYIESPD-----------RETILDPNLQATL 559
++LQEAANY SP + ILD +L++TL
Sbjct: 1457 MRLQEAANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 1493
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 542 bits (1396), Expect = e-154
Identities = 284/578 (49%), Positives = 386/578 (66%), Gaps = 24/578 (4%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
MKLTDIRLEAL+SAHQLDQLRE M+ MQ E++ LKAENDRLK S GS + P
Sbjct: 1793 MKLTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLK---SESQGSGCSRAPSQV 1849
Query: 61 ALS-SPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVT--LRVVVRMPPQHIIKG 117
++S SPR+S+GL+ HS + + + +D C ++E +++VV + K
Sbjct: 1850 SISASPRQSMGLS-QHSLNLTESTSLDMLLDDTGECSARKEGGRHVKIVVSFQEEMKWKE 1908
Query: 118 DLKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVK 177
D + F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +K
Sbjct: 1909 DSRPHLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIK 1968
Query: 178 RVLDAEPPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHR 234
R +E PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HR
Sbjct: 1969 RSNTSETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHR 2028
Query: 235 RLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQI 294
R++LSGPSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q
Sbjct: 2029 RIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQC 2088
Query: 295 DRETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHL 354
+ E D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH
Sbjct: 2089 NSENNAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHH 2148
Query: 355 SFRMLTFSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEK 414
+FR + +N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE
Sbjct: 2149 NFRWVLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEA 2208
Query: 415 HSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPV 474
HS+SD IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP
Sbjct: 2209 HSSSDVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPA 2268
Query: 475 EWVRDTLPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAML 532
+WV DT PW ++ Q + L L P VG + P E T K PS + DPLM ML
Sbjct: 2269 KWVMDTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNML 2328
Query: 533 LKLQEAANYIESPD-----------RETILDPNLQATL 559
++LQEAANY SP + ILD +L++TL
Sbjct: 2329 MRLQEAANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 2365
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 542 bits (1396), Expect = e-154
Identities = 284/578 (49%), Positives = 386/578 (66%), Gaps = 24/578 (4%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
MKLTDIRLEAL+SAHQLDQLRE M+ MQ E++ LKAENDRLK S GS + P
Sbjct: 1860 MKLTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLK---SESQGSGCSRAPSQV 1916
Query: 61 ALS-SPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVT--LRVVVRMPPQHIIKG 117
++S SPR+S+GL+ HS + + + +D C ++E +++VV + K
Sbjct: 1917 SISASPRQSMGLS-QHSLNLTESTSLDMLLDDTGECSARKEGGRHVKIVVSFQEEMKWKE 1975
Query: 118 DLKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVK 177
D + F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +K
Sbjct: 1976 DSRPHLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIK 2035
Query: 178 RVLDAEPPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHR 234
R +E PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HR
Sbjct: 2036 RSNTSETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHR 2095
Query: 235 RLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQI 294
R++LSGPSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q
Sbjct: 2096 RIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQC 2155
Query: 295 DRETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHL 354
+ E D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH
Sbjct: 2156 NSENNAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHH 2215
Query: 355 SFRMLTFSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEK 414
+FR + +N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE
Sbjct: 2216 NFRWVLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEA 2275
Query: 415 HSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPV 474
HS+SD IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP
Sbjct: 2276 HSSSDVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPA 2335
Query: 475 EWVRDTLPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAML 532
+WV DT PW ++ Q + L L P VG + P E T K PS + DPLM ML
Sbjct: 2336 KWVMDTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNML 2395
Query: 533 LKLQEAANYIESPD-----------RETILDPNLQATL 559
++LQEAANY SP + ILD +L++TL
Sbjct: 2396 MRLQEAANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 2432
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 542 bits (1396), Expect = e-154
Identities = 284/578 (49%), Positives = 386/578 (66%), Gaps = 24/578 (4%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSS 60
MKLTDIRLEAL+SAHQLDQLRE M+ MQ E++ LKAENDRLK S GS + P
Sbjct: 1857 MKLTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLK---SESQGSGCSRAPSQV 1913
Query: 61 ALS-SPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVT--LRVVVRMPPQHIIKG 117
++S SPR+S+GL+ HS + + + +D C ++E +++VV + K
Sbjct: 1914 SISASPRQSMGLS-QHSLNLTESTSLDMLLDDTGECSARKEGGRHVKIVVSFQEEMKWKE 1972
Query: 118 DLKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVK 177
D + F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +K
Sbjct: 1973 DSRPHLFLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIK 2032
Query: 178 RVLDAEPPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHR 234
R +E PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HR
Sbjct: 2033 RSNTSETPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHR 2092
Query: 235 RLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQI 294
R++LSGPSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q
Sbjct: 2093 RIILSGPSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQC 2152
Query: 295 DRETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHL 354
+ E D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH
Sbjct: 2153 NSENNAVDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHH 2212
Query: 355 SFRMLTFSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEK 414
+FR + +N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE
Sbjct: 2213 NFRWVLCANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEA 2272
Query: 415 HSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPV 474
HS+SD IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP
Sbjct: 2273 HSSSDVTIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPA 2332
Query: 475 EWVRDTLPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAML 532
+WV DT PW ++ Q + L L P VG + P E T K PS + DPLM ML
Sbjct: 2333 KWVMDTYPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNML 2392
Query: 533 LKLQEAANYIESPD-----------RETILDPNLQATL 559
++LQEAANY SP + ILD +L++TL
Sbjct: 2393 MRLQEAANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 2429
>gi|169218146 PREDICTED: similar to neuron navigator 3, partial
[Homo sapiens]
Length = 733
Score = 516 bits (1328), Expect = e-146
Identities = 263/574 (45%), Positives = 380/574 (66%), Gaps = 15/574 (2%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGST--PGQVPG 58
+KLTDIRLEAL+SAH LDQ+RE M+ MQ E+++LKAENDRLK G ++ T P +
Sbjct: 160 LKLTDIRLEALSSAHHLDQIREAMNRMQNEIEILKAENDRLKAETGNTAKPTRPPSESSS 219
Query: 59 SSALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGD 118
S++ SS R+SLGL+L + +D+ D G K+ +++++V + + D
Sbjct: 220 STSSSSSRQSLGLSLNNLNITEAVSSDILLDDAGDATGHKDGRSVKIIVSISKGYGRAKD 279
Query: 119 LKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKR 178
K Q + +G VSGK W +LD + ++FK+Y+ ++D +++LGLS++ I Y I + R
Sbjct: 280 QKSQAYLIGSIGVSGKTKWDVLDGVIRRLFKEYVFRIDTSTSLGLSSDCIASYCIGDLIR 339
Query: 179 VLDAEPPEMPPCRR--GVNNI-SVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRR 235
+ E PE+ PC G NNI +V+LKG++E +DS VF+TLIPKP+ Q Y +LL++H R
Sbjct: 340 SHNLEVPELLPCGYLVGDNNIITVNLKGVEENSLDSFVFDTLIPKPITQRYFNLLMEHHR 399
Query: 236 LVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQID 295
++LSGPSGTGKTYL N+LAEY++ +SGR+ TE ++TFN+ +S K+LQ YL+NLA Q
Sbjct: 400 IILSGPSGTGKTYLANKLAEYVITKSGRKKTEDAIATFNVDHKSSKELQQYLANLAEQCS 459
Query: 296 RETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLS 355
+ ++P+VI+LD+L GS+S++ NG L CKY+KCPYIIGT NQ V +PN LH +
Sbjct: 460 ADNNGVELPVVIILDNLHHVGSLSDIFNGFLNCKYNKCPYIIGTMNQGVSSSPNLELHHN 519
Query: 356 FRMLTFSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKH 415
FR + +N+ EP GFL RYLRRKL+E + + N +L++++DW+PK W+HL++FLE H
Sbjct: 520 FRWVLCANHTEPVKGFLGRYLRRKLIEIEIERNIRNNDLVKIIDWIPKTWHHLNSFLETH 579
Query: 416 STSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVE 475
S+SD IGP FL CP+ +E R WF+DLWN S++PY+ E ++G++++G++ WEDP +
Sbjct: 580 SSSDVTIGPRLFLPCPMDVEGSRVWFMDLWNYSLVPYILEAVREGLQMYGKRTPWEDPSK 639
Query: 476 WVRDTLPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLL 533
WV DT PW SA Q+ L L P VG S S E T K + + DPLM ML+
Sbjct: 640 WVLDTYPWSSATLPQESPALLQLRPEDVGYESCTSTKEATTSKHIPQTDTEGDPLMNMLM 699
Query: 534 KLQEAANYIESPD--------RETILDPNLQATL 559
KLQEAANY + E ILD +L++TL
Sbjct: 700 KLQEAANYSSTQSCDSESTSHHEDILDSSLESTL 733
>gi|120953251 neuron navigator 3 [Homo sapiens]
Length = 2363
Score = 516 bits (1328), Expect = e-146
Identities = 263/574 (45%), Positives = 380/574 (66%), Gaps = 15/574 (2%)
Query: 1 MKLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSGST--PGQVPG 58
+KLTDIRLEAL+SAH LDQ+RE M+ MQ E+++LKAENDRLK G ++ T P +
Sbjct: 1790 LKLTDIRLEALSSAHHLDQIREAMNRMQNEIEILKAENDRLKAETGNTAKPTRPPSESSS 1849
Query: 59 SSALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVTLRVVVRMPPQHIIKGD 118
S++ SS R+SLGL+L + +D+ D G K+ +++++V + + D
Sbjct: 1850 STSSSSSRQSLGLSLNNLNITEAVSSDILLDDAGDATGHKDGRSVKIIVSISKGYGRAKD 1909
Query: 119 LKQQEFFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKR 178
K Q + +G VSGK W +LD + ++FK+Y+ ++D +++LGLS++ I Y I + R
Sbjct: 1910 QKSQAYLIGSIGVSGKTKWDVLDGVIRRLFKEYVFRIDTSTSLGLSSDCIASYCIGDLIR 1969
Query: 179 VLDAEPPEMPPCRR--GVNNI-SVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRR 235
+ E PE+ PC G NNI +V+LKG++E +DS VF+TLIPKP+ Q Y +LL++H R
Sbjct: 1970 SHNLEVPELLPCGYLVGDNNIITVNLKGVEENSLDSFVFDTLIPKPITQRYFNLLMEHHR 2029
Query: 236 LVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQID 295
++LSGPSGTGKTYL N+LAEY++ +SGR+ TE ++TFN+ +S K+LQ YL+NLA Q
Sbjct: 2030 IILSGPSGTGKTYLANKLAEYVITKSGRKKTEDAIATFNVDHKSSKELQQYLANLAEQCS 2089
Query: 296 RETGIGDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLS 355
+ ++P+VI+LD+L GS+S++ NG L CKY+KCPYIIGT NQ V +PN LH +
Sbjct: 2090 ADNNGVELPVVIILDNLHHVGSLSDIFNGFLNCKYNKCPYIIGTMNQGVSSSPNLELHHN 2149
Query: 356 FRMLTFSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKH 415
FR + +N+ EP GFL RYLRRKL+E + + N +L++++DW+PK W+HL++FLE H
Sbjct: 2150 FRWVLCANHTEPVKGFLGRYLRRKLIEIEIERNIRNNDLVKIIDWIPKTWHHLNSFLETH 2209
Query: 416 STSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVE 475
S+SD IGP FL CP+ +E R WF+DLWN S++PY+ E ++G++++G++ WEDP +
Sbjct: 2210 SSSDVTIGPRLFLPCPMDVEGSRVWFMDLWNYSLVPYILEAVREGLQMYGKRTPWEDPSK 2269
Query: 476 WVRDTLPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLL 533
WV DT PW SA Q+ L L P VG S S E T K + + DPLM ML+
Sbjct: 2270 WVLDTYPWSSATLPQESPALLQLRPEDVGYESCTSTKEATTSKHIPQTDTEGDPLMNMLM 2329
Query: 534 KLQEAANYIESPD--------RETILDPNLQATL 559
KLQEAANY + E ILD +L++TL
Sbjct: 2330 KLQEAANYSSTQSCDSESTSHHEDILDSSLESTL 2363
>gi|239750047 PREDICTED: similar to neuron navigator 2, partial
[Homo sapiens]
Length = 453
Score = 468 bits (1203), Expect = e-132
Identities = 230/452 (50%), Positives = 311/452 (68%), Gaps = 17/452 (3%)
Query: 124 FFLGCSKVSGKVDWKMLDEAVFQVFKDYISKMDPASTLGLSTESIHGYSISHVKRVLDAE 183
F +GC VSGK W +LD V ++FK+YI +DP S LGL+++S+ GYSI +KR +E
Sbjct: 3 FLIGCIGVSGKTKWDVLDGVVRRLFKEYIIHVDPVSQLGLNSDSVLGYSIGEIKRSNTSE 62
Query: 184 PPEMPPCRRGVNN---ISVSLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSG 240
PE+ PC V ISV++KGL E +DSLVFE+LIPKP++Q Y+SLL++HRR++LSG
Sbjct: 63 TPELLPCGYLVGENTTISVTVKGLAENSLDSLVFESLIPKPILQRYVSLLIEHRRIILSG 122
Query: 241 PSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGI 300
PSGTGKTYL NRL+EY+V R GRE+T+G+++TFN+ +S K+L+ YLSNLA+Q + E
Sbjct: 123 PSGTGKTYLANRLSEYIVLREGRELTDGVIATFNVDHKSSKELRQYLSNLADQCNSENNA 182
Query: 301 GDVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLT 360
D+PLVI+LD+L S+ E+ NG L CKYHKCPYIIGT NQ TPN LH +FR +
Sbjct: 183 VDMPLVIILDNLHHVSSLGEIFNGLLNCKYHKCPYIIGTMNQATSSTPNLQLHHNFRWVL 242
Query: 361 FSNNVEPANGFLVRYLRRKLVESDSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDF 420
+N+ EP GFL R+LRRKL+E++ EL++++DW+PK+W+HL+ FLE HS+SD
Sbjct: 243 CANHTEPVKGFLGRFLRRKLMETEISGRVRNMELVKIIDWIPKVWHHLNRFLEAHSSSDV 302
Query: 421 LIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGIKVHGQKAAWEDPVEWVRDT 480
IGP FLSCPI ++ R WF DLWN SIIPYL E ++G++++G++A WEDP +WV DT
Sbjct: 303 TIGPRLFLSCPIDVDGSRVWFTDLWNYSIIPYLLEAVREGLQLYGRRAPWEDPAKWVMDT 362
Query: 481 LPWPSA--QQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQEA 538
PW ++ Q + L L P VG + P E T K PS + DPLM ML++LQEA
Sbjct: 363 YPWAASPQQHEWPPLLQLRPEDVGFDGYSMPREGSTSKQMPPSDAEGDPLMNMLMRLQEA 422
Query: 539 ANYIESPD-----------RETILDPNLQATL 559
ANY SP + ILD +L++TL
Sbjct: 423 ANY-SSPQSYDSDSNSNSHHDDILDSSLESTL 453
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 106 bits (264), Expect = 6e-23
Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 41/332 (12%)
Query: 159 STLGLSTESIHGYSISHVKRVLDAEPPEMP---PCRRGVNNISVSLKGLKEKCVDSLVFE 215
S +GLS SI ++ +V + + P + +I+V L G +E C+ S+ +
Sbjct: 1043 SNIGLSARSIRSITLGNVPWSVGQSFAQSPWDFMRKNKAEHITVLLSGPQEGCLSSVTYA 1102
Query: 216 TLIPKPMMQHYISLLLKHRRLVLSGPSGTGKTYLTNRLAEYLVER------SGREVTEGI 269
++IP MMQ+Y+ L+ ++ ++ GP G+ + Y+ ++LA L R S V +
Sbjct: 1103 SMIPLQMMQNYLRLVEQYHNVIFHGPEGSLQDYIVHQLALCLKHRQMAAGFSCEIVRAEV 1162
Query: 270 VSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLSEAGSISELV------- 322
+ F+ Q L L++S+ A I + ++I+L++L E S+SEL+
Sbjct: 1163 DAGFSKEQL----LDLFISS-ACLIPVKQSPSKKKIIIILENL-EKSSLSELLRDFLAPL 1216
Query: 323 --------------NGALTCKY-HKCPYIIGTTNQPVKMTPNHGLHLSFRMLTFSNNVEP 367
NG C Y H+ +++GT + + + FR + + EP
Sbjct: 1217 ENRSTESPCTFQKGNGLSECYYFHENCFLMGTIAKACLQGSDLLVQQHFRWVQLRWDGEP 1276
Query: 368 ANGFLVRYLRRKLVES-DSDINANKEELLRVLDWVPKLWYHLHTFLEKHSTSDFLIGPCF 426
G L R+LRRK+V + + + +++DW +W L++ L + T + L+GP +
Sbjct: 1277 MQGLLQRFLRRKVVNKFKGQAPSPCDPVCKIVDWALSVWRQLNSCLARLGTPEALLGPKY 1336
Query: 427 FLSCPI---GIEDFRTWFIDLWNNSIIPYLQE 455
FLSCP+ + W LWN I P +QE
Sbjct: 1337 FLSCPVVPGHAQVTVKWMSKLWNGVIAPRVQE 1368
>gi|11321607 thyroid hormone receptor interactor 13 [Homo sapiens]
Length = 432
Score = 34.3 bits (77), Expect = 0.31
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 40/168 (23%)
Query: 210 DSLVFETLIPKPMMQHYISLLLK------------HRRLVLSGPSGTGKTYLTNRLAEYL 257
DSLV++ + ++ + ++ LL +R ++L GP GTGKT L LA+ L
Sbjct: 137 DSLVYDVEVKSHLLDYVMTTLLFSDKNVNSNLITWNRVVLLHGPPGTGKTSLCKALAQKL 196
Query: 258 VERSGREVTEGIVSTFNMH-------QQSCKDLQLYLSNLANQIDRETGIGDVPLVILLD 310
R G + N H +S K + + + ID + D + +L+D
Sbjct: 197 TIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDK----DALVFVLID 252
Query: 311 DL-------------SEAGSISELVNGALT----CKYHKCPYIIGTTN 341
++ +E +VN LT K H I+ T+N
Sbjct: 253 EVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN 300
>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
Length = 159
Score = 33.9 bits (76), Expect = 0.40
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 48 SSGSTPGQVPGSSAL-----SSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKEEVT 102
SS PG+ PG L SPR + A S G L T SP +G+S GP +
Sbjct: 37 SSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAAS 96
Query: 103 L-RVVVRMPP 111
L R V PP
Sbjct: 97 LPRAQVPTPP 106
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 32.7 bits (73), Expect = 0.90
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 45 PGPSSGSTPGQVPGSSALSSPRRSL-GLALTHSFGPSLADTDL--SPMDGISTCGPKEEV 101
PG +S S PG P ++AL+SP+ +L GL T P L + L P + +
Sbjct: 3127 PGLNSPSLPGFTPSNTALTSPKPNLMGLPSTTVPSPGLPTSGLPNKPSSASLSSPTPAQA 3186
Query: 102 TLRVVVRMPPQ 112
T+ + + PPQ
Sbjct: 3187 TMAMGPQQPPQ 3197
>gi|5031877 lamin B1 [Homo sapiens]
Length = 586
Score = 32.3 bits (72), Expect = 1.2
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 2 KLTDIRLEALNSAHQLDQLRETMHNMQLEVD----LLKAENDRLKVAPGPSSGSTPGQVP 57
++ +IR + + +QL + + +E+ LL+ E +RLK++P PSS T +
Sbjct: 345 EMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERLKLSPSPSSRVTVSRAS 404
Query: 58 GSSALSSPR 66
S ++ + R
Sbjct: 405 SSRSVRTTR 413
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 487 QQDQSKLYHLP--PPTVGPHSIASPPEDRTVKDSTPSSLDSDPLMAMLLKLQE------- 537
Q D + LY+L PPT+GP A PE V S PS L ++L E
Sbjct: 80 QMDITSLYNLKFQPPTLGPEPAARTPEGSPVHGSGPSKDSFGELSRATIRLLEELDRERC 139
Query: 538 -AANYIESPDRETI 550
N IE ++E +
Sbjct: 140 FLLNEIEKEEKEKL 153
>gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo
sapiens]
Length = 1032
Score = 31.2 bits (69), Expect = 2.6
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 44 APGPSSGSTPGQVP----GSSALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPKE 99
+PG + S+PG+ G + +SSP +++ +L + SL +S + GP +
Sbjct: 776 SPGKAIVSSPGKAIVSGLGKAIVSSPGKAIVSSLGKAIVSSLGKAIVSSLGKAIVSGPGK 835
Query: 100 EVTLRVVVRMPPQHII 115
+++RV+ + P+ I+
Sbjct: 836 AISIRVMTILTPECIL 851
>gi|4505725 peroxin1 [Homo sapiens]
Length = 1283
Score = 31.2 bits (69), Expect = 2.6
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 200 SLKGLKEKCVDSL--VFETLIPKPMMQHYISLL--LKHRRLVLSGPSGTGKTYLTNRLAE 255
SL G+ V SL + +L+ +P+ + +SL+ L++ L+L+G G+GK+ L + +
Sbjct: 555 SLGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGALLLTGGKGSGKSTLAKAICK 614
Query: 256 YLVERSGREVTEGIVSTFNMHQQSCKDLQ-LYLSNLAN--QIDRETGIGDVPLVILLDDL 312
++ V + CK L+ L N+ ++ + P V+LLDDL
Sbjct: 615 EAFDKLDAHV----------ERVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDL 664
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 31.2 bits (69), Expect = 2.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 232 KHRRLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGI 269
K++ +V+SG SG+GKT TN L +L S + G+
Sbjct: 231 KNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGV 268
>gi|32454748 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 2.6
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 204 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 256
L+E+ L + ++S LLK L ++ GP G+GKT L N +
Sbjct: 24 LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
Query: 257 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 313
L+E EV+E ++ D ++ L + Q++ E +GD ++LS
Sbjct: 84 LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
>gi|32454746 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 2.6
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 204 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 256
L+E+ L + ++S LLK L ++ GP G+GKT L N +
Sbjct: 24 LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
Query: 257 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 313
L+E EV+E ++ D ++ L + Q++ E +GD ++LS
Sbjct: 84 LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
>gi|32454750 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 2.6
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 204 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 256
L+E+ L + ++S LLK L ++ GP G+GKT L N +
Sbjct: 24 LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
Query: 257 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 313
L+E EV+E ++ D ++ L + Q++ E +GD ++LS
Sbjct: 84 LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
>gi|5031937 calcium binding and coiled-coil domain 2 [Homo sapiens]
Length = 446
Score = 31.2 bits (69), Expect = 2.6
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 20 LRETMHNMQLEVDLLKAENDRLKVAPGPSSGSTPGQVPGSSALSSPRRSLGLALTHSFGP 79
L+ ++ E DLLK EN RL G S P QVP S R++ GLA + +
Sbjct: 324 LQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQVPTSDE-GGARQNPGLAYGNPYSG 382
Query: 80 SLADTDLSPM 89
+ SP+
Sbjct: 383 IQESSSPSPL 392
>gi|27436951 lamin B2 [Homo sapiens]
Length = 600
Score = 30.8 bits (68), Expect = 3.4
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 2 KLTDIRLEALNSAHQLDQLRETMHNMQLEVD----LLKAENDRLKVAPGPSSGSTPGQVP 57
++T++R + +L + + +E++ LL+ E +RLK++P PSS T +
Sbjct: 339 EMTEMRDVMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRAT 398
Query: 58 GSSALS---------SPRRSLGLALTHSFGPSLADT 84
SS+ S S R+ L + GPS+ T
Sbjct: 399 SSSSGSLSATGRLGRSKRKRLEVEEPLGSGPSVLGT 434
>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2
[Homo sapiens]
Length = 1461
Score = 30.4 bits (67), Expect = 4.5
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 42 KVAPGPSSGSTPGQVPG--SSALSSPRRSLGLALTHSFGPSLADTDLSPMDGISTCGPK- 98
+V+ +S ++ GQ PG S+ P SLG TH+ P+ T+++ PK
Sbjct: 600 EVSSTSASKASIGQSPGLPSTTFKLPSNSLGFTATHNTSPAAPPTEVTICQSSEVSKPKL 659
Query: 99 EEVTLRVVVRMPPQHIIKGD 118
E + + M + +KG+
Sbjct: 660 ESESTSPSLEMKIHNFLKGN 679
>gi|5453802 neural retina leucine zipper [Homo sapiens]
Length = 237
Score = 30.0 bits (66), Expect = 5.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 6 IRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLKVAPGPSSG 50
+ E A QLD LR + + E DL KA DRL + GP SG
Sbjct: 187 LEAERARLAAQLDALRAEVARLARERDLYKARCDRL-TSSGPGSG 230
>gi|169234742 NACHT and WD repeat domain containing 1 [Homo sapiens]
Length = 1429
Score = 30.0 bits (66), Expect = 5.8
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 232 KHRRLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLA 291
+H LVL GP G GKT L +LAE + G + T ++ Q S D + L ++
Sbjct: 198 QHTPLVLFGPPGIGKTALMCKLAEQMPRLLGHK-TVTVLRLLGTSQMS-SDARGLLKSIC 255
Query: 292 NQIDRETGIGDVPLVIL 308
Q+ G+ P +L
Sbjct: 256 FQVCLAYGLPLPPAQVL 272
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 30.0 bits (66), Expect = 5.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 2 KLTDIRLEALNSAHQLDQLRETMHNMQLEVDLLKAENDRLK 42
+L+++ S+ +LD LRE H +QLE L+ E RL+
Sbjct: 1543 RLSELEFHNSKSSKELDFLREENHKLQLERQNLQLETRRLQ 1583
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 29.6 bits (65), Expect = 7.6
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 203 GLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLVLSGPSGTGKTYLTNRLA 254
GL+E V + ET+ +SL L+ L+L GP GTGKT L +A
Sbjct: 709 GLQE--VKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVA 758
>gi|118572611 nucleotide binding protein 1 [Homo sapiens]
Length = 320
Score = 29.6 bits (65), Expect = 7.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 231 LKHRRLVLSGPSGTGKTYLTNRLAEYLVERSGREV 265
+KH+ LVLSG G GK+ + LA L E ++
Sbjct: 53 VKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQI 87
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 29.6 bits (65), Expect = 7.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 226 YISLLLK--HRRLVLSGPSGTGKTYLTNRLAEYLVERSGREVTEGIVST 272
Y ++L K ++ +V+SG SG+GKT TN L L S + G+ T
Sbjct: 223 YYTMLRKRVNQCIVISGESGSGKTQSTNFLIHCLTALSQKGYASGVERT 271
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,713,203
Number of Sequences: 37866
Number of extensions: 1177378
Number of successful extensions: 4770
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 4687
Number of HSP's gapped (non-prelim): 87
length of query: 559
length of database: 18,247,518
effective HSP length: 107
effective length of query: 452
effective length of database: 14,195,856
effective search space: 6416526912
effective search space used: 6416526912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.