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Search of human proteins with 239747242
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747242 PREDICTED: hypothetical protein [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752706 PREDICTED: hypothetical protein [Homo sapiens] 357 4e-99
gi|239747242 PREDICTED: hypothetical protein [Homo sapiens] 357 4e-99
gi|239741063 PREDICTED: hypothetical protein XP_002342081 [Homo ... 355 1e-98
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 7e-07
gi|40353727 synaptopodin isoform A [Homo sapiens] 49 3e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 48 4e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 48 5e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 47 8e-06
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 46 1e-05
gi|52630419 sterol regulatory element binding transcription fact... 46 2e-05
gi|22547195 sterol regulatory element binding transcription fact... 46 2e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 2e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 2e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 45 2e-05
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 45 2e-05
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 45 2e-05
gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 45 2e-05
gi|241982780 programmed cell death 6 interacting protein isoform... 45 3e-05
gi|22027538 programmed cell death 6 interacting protein isoform ... 45 3e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 3e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 45 3e-05
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ... 45 4e-05
gi|153792074 proline rich 12 [Homo sapiens] 44 9e-05
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|33286436 gametogenetin [Homo sapiens] 43 1e-04
gi|239756691 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo ... 43 1e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 43 1e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 43 1e-04
>gi|239752706 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 357 bits (915), Expect = 4e-99
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS
Sbjct: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
Query: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT 120
RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT
Sbjct: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT 120
Query: 121 FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK
Sbjct: 121 FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
>gi|239747242 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 357 bits (915), Expect = 4e-99
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS
Sbjct: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
Query: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT 120
RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT
Sbjct: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT 120
Query: 121 FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK
Sbjct: 121 FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
>gi|239741063 PREDICTED: hypothetical protein XP_002342081 [Homo
sapiens]
Length = 170
Score = 355 bits (910), Expect = 1e-98
Identities = 169/170 (99%), Positives = 169/170 (99%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS
Sbjct: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
Query: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT 120
RSVAEKHLLN VTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT
Sbjct: 61 RSVAEKHLLNPVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHAT 120
Query: 121 FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK
Sbjct: 121 FTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.4 bits (119), Expect = 7e-07
Identities = 41/154 (26%), Positives = 53/154 (34%), Gaps = 24/154 (15%)
Query: 17 PRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSP 76
P S + S +P P+G P P P + + TPSP
Sbjct: 1040 PPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Query: 77 CPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKG 136
AP+ P + P + GL TPP GA + A AT P G L+
Sbjct: 1100 KGAPMPPAATPPSPKGGLATPPHKGAPTTPA-----------ATPPSPKGGLA------- 1141
Query: 137 ATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
PP G P P T SP ++ PPK
Sbjct: 1142 ------TPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Score = 46.2 bits (108), Expect = 1e-05
Identities = 45/158 (28%), Positives = 51/158 (32%), Gaps = 42/158 (26%)
Query: 22 QSGRVSPPPRG---TARARPP------LRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAV 72
+ G +P P+G T A PP P P P AA P
Sbjct: 1206 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG---------GPA 1256
Query: 73 TPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGL 132
TP P AP P + P + GL TPP GA A T P G
Sbjct: 1257 TPPPKGAPTPPAATPPSLKGGLATPPHKGAPNP-----------AVVTPPSPKG------ 1299
Query: 133 FLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
G +PP G P P T SP S PPK
Sbjct: 1300 -------GPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330
Score = 44.3 bits (103), Expect = 5e-05
Identities = 50/181 (27%), Positives = 63/181 (34%), Gaps = 42/181 (23%)
Query: 22 QSGRVSPPPRGTARARPPLRPHPAPR------PREMA----AAAPQNGSRSVAEKHLLNA 71
+ G +P P+G PP P+P+ P + A AA P + +A
Sbjct: 1091 KGGPATPSPKGAPM--PPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLA------- 1141
Query: 72 VTPSPCPAPLAPTSFSPPRRPGLPTPPRPGAT------------GSGARQQRGAFVRAHA 119
TP P AP P + P + GL TPP GA G +GA A
Sbjct: 1142 -TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1200
Query: 120 TFTQPHGPLS-----GGLFLKGAT-----AGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
T P G L+ G AT G P G P P T SP + PP
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP 1260
Query: 170 K 170
K
Sbjct: 1261 K 1261
Score = 42.0 bits (97), Expect = 3e-04
Identities = 46/160 (28%), Positives = 59/160 (36%), Gaps = 24/160 (15%)
Query: 28 PPPRGTARARPPLRPHP--APRPREMAAAAPQNGSRSVAEKHLLN--AVTP-SPCPAPLA 82
P P+G P P P AP P +P+ G + + K AVTP SP +P A
Sbjct: 971 PSPKGG-----PATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAA 1025
Query: 83 PTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPH-GPLSGGLFLKGATAGR 141
P TPP P + + +GA AT P GP + LKGA
Sbjct: 1026 TPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPS--LKGAPTPP 1083
Query: 142 NGAP-----------PPGTPLRPGVTTVSPTRSVSVRPPK 170
P P G P+ P T SP ++ P K
Sbjct: 1084 AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHK 1123
Score = 40.8 bits (94), Expect = 6e-04
Identities = 39/141 (27%), Positives = 50/141 (35%), Gaps = 24/141 (17%)
Query: 39 PLRPHPAPRPR-EMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTP 97
P P P P M +++P+ + A K + + +P P P A T SP P P+P
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP 959
Query: 98 ---PRPGAT-------GSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPP 147
P P A G +GA AT P G G P
Sbjct: 960 KWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG-------------GPATPSPK 1006
Query: 148 GTPLRPGVTTVSPTRSVSVRP 168
G P P VT SP S + P
Sbjct: 1007 GAPTPPAVTPPSPKGSPAATP 1027
Score = 38.1 bits (87), Expect = 0.004
Identities = 42/163 (25%), Positives = 58/163 (35%), Gaps = 29/163 (17%)
Query: 22 QSGRVSPPPRGT----ARARPPLR------PHP-APRPREMAAAAPQNGSRSVAEKHLLN 70
+ G +PPP+G A P L+ PH AP P + +P+ G + K
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK---G 1308
Query: 71 AVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSG 130
A TP P S P G PTPP +G T + GP +
Sbjct: 1309 APTPPAATPPSPKGSPGTPPPKGAPTPP-----AVTPPSPKGTPTLPATTPSSKGGPTT- 1362
Query: 131 GLFLKGATAGRNGAPPPGTPLR---PGVTTVSPTRSVSVRPPK 170
++ PP TP P +T SP R ++ PK
Sbjct: 1363 ------PSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPK 1399
Score = 30.8 bits (68), Expect = 0.59
Identities = 47/150 (31%), Positives = 57/150 (38%), Gaps = 19/150 (12%)
Query: 28 PPPRGTARARPPLRPHPAPRPREMA---AAAPQNGSRSVAEKHLL--NAVT-PSP--CPA 79
P P+ T P P +E + A P + + K LL AVT PSP P
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPT 1615
Query: 80 PLAPTSFSPPRRPGLP----TPPRPGATGSGARQQ--RGAFVRAHATFTQPHGPLSGGL- 132
P A T SP + P P TP P T S + A V T P S GL
Sbjct: 1616 PPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQA--SKGLP 1673
Query: 133 FLKGATAGRNGAPPPGTPLRPGVTTVSPTR 162
KG TA + P P +T +PTR
Sbjct: 1674 AKKGPTALKEVLVAPAPESTPIIT--APTR 1701
Score = 30.8 bits (68), Expect = 0.59
Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 15/91 (16%)
Query: 22 QSGRVSPPPRGTARARPPLRPH--------PAPRPREMAAAAPQNGSRSVAEK------H 67
+ G +P P+GT + PP+ P PA +M A PQ A+K
Sbjct: 1625 EKGPATPAPKGTPTS-PPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKE 1683
Query: 68 LLNAVTPSPCPAPLAPTSFSPPRRPGLPTPP 98
+L A P P APT P + T P
Sbjct: 1684 VLVAPAPESTPIITAPTRKGPQTKKSSATSP 1714
Score = 30.0 bits (66), Expect = 1.0
Identities = 41/169 (24%), Positives = 59/169 (34%), Gaps = 24/169 (14%)
Query: 15 LEPRSEEQSGRVSPPPRGT------------ARARPPLRPHPAPRPREMAAAAPQNGSRS 62
L P + S PP GT A P+ P P E + A+ S+
Sbjct: 726 LAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKG 785
Query: 63 VAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRP-GATGSGARQQRGAFVRAHATF 121
A +PSP ++P + PP + G P P G S +F+ ++
Sbjct: 786 TLT---YLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLS 842
Query: 122 TQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
Q G T P G P VT +SP + V++ PPK
Sbjct: 843 FQ------GSKDSPATTHSPTPPSPKGAPTPSAVTPLSP-KGVTL-PPK 883
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 48.5 bits (114), Expect = 3e-06
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 19 SEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSP-C 77
S +G +P P RA PP P P P PR + + GS +V A P P
Sbjct: 771 SPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGA----AFAPIPRS 826
Query: 78 PAPLAPTSFSPPRRPGLPTPPRP 100
P P P+S + PR P LP PPRP
Sbjct: 827 PLPAGPSSCTSPRSP-LPAPPRP 848
Score = 43.5 bits (101), Expect = 9e-05
Identities = 49/168 (29%), Positives = 66/168 (39%), Gaps = 42/168 (25%)
Query: 24 GRVSPPP----RGTARARPPLRPHPAP-------------RPREMAAAAPQNGSRSVAEK 66
G VSP P RG++ + PP P P P RP E A P +++ +
Sbjct: 701 GWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRP-ETEARPPSRQLQALLAR 759
Query: 67 HLLNAV---TPSPCPAPLA-PTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFT 122
+++NA + SP A P FSPPR P P PP P +
Sbjct: 760 NIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRS--------------P 805
Query: 123 QPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
QP P S A G AP P +PL G ++ + RS PP+
Sbjct: 806 QPARPGSA------AVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPR 847
Score = 41.2 bits (95), Expect = 4e-04
Identities = 44/146 (30%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
Query: 28 PPPRGTA---RARPPLRPHPAPRP--REMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLA 82
PPP + R+ PLRP RP R++ A +N + K + P P +
Sbjct: 725 PPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFS 784
Query: 83 PTSFSPPRRPGLPTPPR-----PGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGA 137
P PP P P PPR P GS A V A P PL G
Sbjct: 785 PPRAPPPPPPPPPPPPRMRSPQPARPGSAA-------VPGAAFAPIPRSPLPAG--PSSC 835
Query: 138 TAGRNGAPPPGTPLRPGVTTVSPTRS 163
T+ R+ P P RP + SPT S
Sbjct: 836 TSPRSPLP---APPRPFLYRRSPTDS 858
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 48.1 bits (113), Expect = 4e-06
Identities = 48/165 (29%), Positives = 58/165 (35%), Gaps = 54/165 (32%)
Query: 19 SEEQSGRVSPPPRGT----------------ARARPPLRPHPAPRPREMAAAAPQNGSRS 62
S + RV PP RG A A PP P P P P +AAAAP R+
Sbjct: 92 SYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRA 151
Query: 63 VA---------------EKHLLNAVTPSPCPAPLAPTSFSPP-------------RRPGL 94
A + A +P PAP AP + +PP R P L
Sbjct: 152 AAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPL 211
Query: 95 PTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATA 139
P PP+P A +QQ+ QP P GG G A
Sbjct: 212 PPPPQPPAP---PQQQQ-------PPPPQPQPPPEGGAVRAGGAA 246
Score = 42.4 bits (98), Expect = 2e-04
Identities = 41/144 (28%), Positives = 50/144 (34%), Gaps = 33/144 (22%)
Query: 31 RGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPR 90
R AR +PP R P P +P AP A + +PP
Sbjct: 94 RNAARVQPPRRGATPPAPPR------------------------APRGAPAAAAAAAPPP 129
Query: 91 RPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTP 150
P P PP P A + AR R A A AT GP G + A APPP
Sbjct: 130 TPAPPPPPAPVAAAAPARAPRAA--AAAATAPPSPGPAQPG--PRAQRAAPLAAPPPAPA 185
Query: 151 LRPGVTTV-----SPTRSVSVRPP 169
P V +P +V+ R P
Sbjct: 186 APPAVAPPAGPRRAPPPAVAAREP 209
Score = 26.9 bits (58), Expect = 8.5
Identities = 43/167 (25%), Positives = 50/167 (29%), Gaps = 33/167 (19%)
Query: 2 QPGSEAVGGRDWGLEPRSEEQSGRVSPP-------PRGTARARPPLRPHPAP--RPREMA 52
QPG A P + V+PP P A PPL P P P P++
Sbjct: 166 QPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQ 225
Query: 53 AAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPR--PGATGSGARQQ 110
PQ P P P A + R L R G+ G+G R
Sbjct: 226 PPPPQ----------------PQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLT 269
Query: 111 RGAFVRAHATFTQPHGPLS----GGLFLKGATAGRNGAPPPGTPLRP 153
RG G L G L L R G PP RP
Sbjct: 270 RGRVQGLLEEEAAARGRLERTRLGALAL--PRGDRPGRAPPAASARP 314
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.8 bits (112), Expect = 5e-06
Identities = 48/148 (32%), Positives = 52/148 (35%), Gaps = 36/148 (24%)
Query: 27 SPPPRGTARARPPLRPHP--APRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPT 84
+PP G A P P P AP P AAA P P P PA LA
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPP----------------PPPPAPATLA-- 281
Query: 85 SFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGA 144
PP P P P A Q G+ A A P +GG AG +G
Sbjct: 282 --RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAP-----APAAGG------PAGVSGQ 328
Query: 145 PPPGTPL---RPGVTTVSPTRSVSVRPP 169
P PG PGV SP R V PP
Sbjct: 329 PGPGAAAAAPAPGVKAESPKRVVQAAPP 356
Score = 38.1 bits (87), Expect = 0.004
Identities = 47/168 (27%), Positives = 58/168 (34%), Gaps = 17/168 (10%)
Query: 17 PRSEEQSGRVSPPPRGTARARPPLRPHPAP------RPREMAAAAPQNGSRSVAEKHLLN 70
P S +P P A A PP P PA P AAP + A+
Sbjct: 250 PAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSA 309
Query: 71 AVTPSPCPAPLAPTSFSPPRRPG-LPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLS 129
P+P PA P S PG P PG ++ A A T GP S
Sbjct: 310 GAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLA-ASGPAS 368
Query: 130 G------GLFLKGATAGRNGAPP--PGTPL-RPGVTTVSPTRSVSVRP 168
G ++GA PP PGTP P + T+S+S P
Sbjct: 369 TAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTP 416
Score = 34.7 bits (78), Expect = 0.041
Identities = 46/165 (27%), Positives = 54/165 (32%), Gaps = 26/165 (15%)
Query: 28 PPPRGTARARP----PLRPHPAPRPREMAAAA------------PQNGSRSVAEKHLLNA 71
PPP G RARP P RP P P PR A P+ + S A A
Sbjct: 89 PPPAG--RARPGGGGPQRPGP-PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAA 145
Query: 72 VTPSPCPAPLAPTSFSPPRRPGLPTPPRPG---ATGSGARQQRGAFVRAHATFTQPHGPL 128
V P PAP P + P P PG G G + A A T L
Sbjct: 146 VAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALL 205
Query: 129 SGGLFLKGATAGRNGAP----PPGTPLRPGVTTVSPTRSVSVRPP 169
+ A + N P P P PG +P + PP
Sbjct: 206 NSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP 250
Score = 33.9 bits (76), Expect = 0.069
Identities = 42/145 (28%), Positives = 47/145 (32%), Gaps = 34/145 (23%)
Query: 43 HPAPRPREMAAAAP--------------QNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSP 88
H APR E+ AAA G+ A P P PA A
Sbjct: 42 HLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGG 101
Query: 89 PRRPGLPTPPRP------------------GATGSGARQQRGAFVRAHATFTQPHGPLS- 129
P+RPG P+P RP G+ GS A A V A P GP
Sbjct: 102 PQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA-GPEPAPAGPAKP 160
Query: 130 GGLFLKGATAGRNGAPPPGTPLRPG 154
G A AG P PG PG
Sbjct: 161 AGPAALAARAGPGPGPGPGPGPGPG 185
Score = 33.1 bits (74), Expect = 0.12
Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 3 PGSEAVGGRDWGLEPRSEEQSGR---VSPPPRGTARARPPLRPHPAPRPREMAAAAPQ-- 57
P + A G G P +G VS P A A P A P+ + AAP
Sbjct: 299 PPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAA 358
Query: 58 -----NGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGS 105
+G S A ++ P+P A PP PG PT GA G+
Sbjct: 359 QTLAASGPASTAASMVIGPTMQGALPSPAAV----PPPAPGTPTGLPKGAAGA 407
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.0 bits (110), Expect = 8e-06
Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 38/156 (24%)
Query: 18 RSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPC 77
+ ++Q PPP+ +PP PHP P ++ PQ+ S+ V A P P
Sbjct: 67 QQQQQPPPQQPPPQQPPPHQPP--PHPQPHQQQQPPPPPQDSSKPVV------AQGPGPA 118
Query: 78 P----APLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLF 133
P AP A +S +PP P PT P +G G T T P
Sbjct: 119 PGVGSAPPASSS-APPATP--PTSGAPPGSGPGP------------TPTPP--------- 154
Query: 134 LKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
T+ GAPPP TP GV T P PP
Sbjct: 155 -PAVTSAPPGAPPP-TPPSSGVPTTPPQAGGPPPPP 188
Score = 44.7 bits (104), Expect = 4e-05
Identities = 46/160 (28%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRP--REMAAAAPQN 58
M PG G + + P Q + PP + + PP +P P P+P ++ PQ+
Sbjct: 47 MGPGPGQSGPKP-PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQD 105
Query: 59 GSRSVAEKHLLNAVTPSPCP----APLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAF 114
S+ V A P P P AP A +S +PP P PT P +G G
Sbjct: 106 SSKPVV------AQGPGPAPGVGSAPPASSS-APPATP--PTSGAPPGSGPGPTPTPPPA 156
Query: 115 VRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPG 154
V + P P S G+ T + G PPP PG
Sbjct: 157 VTSAPPGAPPPTPPSSGV---PTTPPQAGGPPPPPAAVPG 193
Score = 37.4 bits (85), Expect = 0.006
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 19/132 (14%)
Query: 16 EPRSEEQSGRVSPPPRGTARARPPLRPHPAP----RPREMAAAAPQNGSRSVAEKHLLNA 71
+P ++Q PPP+ +++ P PAP P ++A P S A
Sbjct: 92 QPHQQQQP---PPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPG 148
Query: 72 VTPSPCPA----------PLAPTSFSP--PRRPGLPTPPRPGATGSGARQQRGAFVRAHA 119
TP+P PA P P+S P P + G P PP G G ++G
Sbjct: 149 PTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPK 208
Query: 120 TFTQPHGPLSGG 131
P GP GG
Sbjct: 209 GGKMPGGPKPGG 220
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 46.2 bits (108), Expect = 1e-05
Identities = 45/148 (30%), Positives = 60/148 (40%), Gaps = 40/148 (27%)
Query: 16 EPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPS 75
EP S Q + P P PPL P+ + PR A P G S +E TP
Sbjct: 278 EPASPAQDAQEPPAPP------PPLPPYASCSPRASLPAPPLPGVNSSSE-------TPP 324
Query: 76 PCPAPLAPTSFSPPRRPG---LPTPPRPGATGSGARQQRGAFVRAHATFTQPHG-PLSGG 131
P P P +P+ +PP++ G LP PP P + +++R HG P +GG
Sbjct: 325 PLP-PKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKR-------------HGRPGAGG 370
Query: 132 LFLKGATAGRNGAPPPGTPLRPGVTTVS 159
L PPP P R T +S
Sbjct: 371 GKLN---------PPPAPPARSPTTELS 389
Score = 36.6 bits (83), Expect = 0.011
Identities = 45/163 (27%), Positives = 55/163 (33%), Gaps = 19/163 (11%)
Query: 19 SEEQSGRVSPPPRGTARARPPLRPH------PAPRPREMAAAAPQNGSRSVAEKHLLNAV 72
SE + PPR A PP P P P P P K L V
Sbjct: 156 SEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVV 215
Query: 73 TPSPCPAPLAPTSFSPPRRPGLPT-PPRPGATGSGARQQRGAFVRAHATFTQPHGPL--- 128
P P P AP PP P PT PP P A+ + + H P PL
Sbjct: 216 AP---PVPCAP---PPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPP 269
Query: 129 --SGGLFLKGATAGRNGAPPPG-TPLRPGVTTVSPTRSVSVRP 168
GL + A+ ++ PP P P + SP S+ P
Sbjct: 270 CGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPP 312
Score = 33.1 bits (74), Expect = 0.12
Identities = 37/137 (27%), Positives = 49/137 (35%), Gaps = 15/137 (10%)
Query: 34 ARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPG 93
+RA P P+ + A+P+ G+ S A A PAP PT PP P
Sbjct: 128 SRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPT--PPPPPPP 185
Query: 94 LPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRP 153
LP PP P ++ P GPL+ G A PPP P P
Sbjct: 186 LP-PPLPSSS------------PIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPP 232
Query: 154 GVTTVSPTRSVSVRPPK 170
+ P +S + K
Sbjct: 233 TPPPLPPASVLSDKAVK 249
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Query: 74 PSPCPAPLAPTSFSPPRRPGLPTPPRPGA 102
P P P PL P PP G P PP P A
Sbjct: 4 PPPPPPPLPP----PPPPLGAPPPPPPSA 28
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 45.8 bits (107), Expect = 2e-05
Identities = 49/167 (29%), Positives = 60/167 (35%), Gaps = 45/167 (26%)
Query: 14 GLEPRSEEQS--GRVSPPPR-----------GTARARPPLRP-HPAPRPREMAAAAPQ-N 58
G +P S + S G +SPPP G A PL P PAP P +M + P +
Sbjct: 88 GTDPASPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAFS 147
Query: 59 GSRSVAEKH----LLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAF 114
+ E+ +L TP P P L P SF P P + P G
Sbjct: 148 PGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGY------------ 195
Query: 115 VRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLR--PGVTTVS 159
P G F G+ G P PG PL PGV VS
Sbjct: 196 ------------PSPPGGFSTGSPPGNTQQPLPGLPLASPPGVPPVS 230
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 45.8 bits (107), Expect = 2e-05
Identities = 49/167 (29%), Positives = 60/167 (35%), Gaps = 45/167 (26%)
Query: 14 GLEPRSEEQS--GRVSPPPR-----------GTARARPPLRP-HPAPRPREMAAAAPQ-N 58
G +P S + S G +SPPP G A PL P PAP P +M + P +
Sbjct: 58 GTDPASPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAFS 117
Query: 59 GSRSVAEKH----LLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAF 114
+ E+ +L TP P P L P SF P P + P G
Sbjct: 118 PGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGY------------ 165
Query: 115 VRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLR--PGVTTVS 159
P G F G+ G P PG PL PGV VS
Sbjct: 166 ------------PSPPGGFSTGSPPGNTQQPLPGLPLASPPGVPPVS 200
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 45.8 bits (107), Expect = 2e-05
Identities = 46/181 (25%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 2 QPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSR 61
QPG + GL +Q G V PP + +PP +P +P + + S
Sbjct: 325 QPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSE 384
Query: 62 SVAEKHLLN----AVTPSPCPAPLAP------TSFSPPRRPGLPTPPR-PGATGSGARQQ 110
K L TP+ P P P T ++PGL +P + PG T + +Q
Sbjct: 385 QPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQP 444
Query: 111 RGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPG--TPLRPGVTTVSPTRSVSVRP 168
+ A Q GP G T + P P P +PG P + S +P
Sbjct: 445 GPGKIPA-----QQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 169 P 169
P
Sbjct: 500 P 500
Score = 44.7 bits (104), Expect = 4e-05
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 18/174 (10%)
Query: 2 QPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAP---QN 58
QPG + + G S +Q+G PP + A+PP P++ A P Q
Sbjct: 443 QPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPP--------PQQPGPAKPPPQQP 494
Query: 59 GSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPP--RPGATGSGARQQRGAFVR 116
GS + + P P P P+ P++PG PP +PG+ A+Q A
Sbjct: 495 GSAKPPSQQPGSTKPPPQQPGPAKPS----PQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
Query: 117 AHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
A + T+P G L+ T + PP L + + T + + P+
Sbjct: 551 AQQS-TKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPE 603
Score = 33.5 bits (75), Expect = 0.091
Identities = 45/173 (26%), Positives = 63/173 (36%), Gaps = 23/173 (13%)
Query: 19 SEEQSGRVSPPPRGTAR-----ARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVT 73
S +Q ++ P GT + + P H A P + A+ PQ + +
Sbjct: 240 SSQQPEKIKSQPPGTGKPIQGPTQTPQTDH-AKLPLQRDASRPQTKQADIVRGESVKPSL 298
Query: 74 PSPCPAPLA-PTSFSPP-RRPG----LPTPPRPGATGSG----ARQQRGAF---VRAHAT 120
PSP P+ PT PP ++PG P P +P A SG QQ G V+ T
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT 358
Query: 121 F---TQPHGPLSGGLFLKGATAGRNGAP-PPGTPLRPGVTTVSPTRSVSVRPP 169
QP GP G+ + P P PGV + +PP
Sbjct: 359 TKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPP 411
Score = 28.9 bits (63), Expect = 2.2
Identities = 38/174 (21%), Positives = 60/174 (34%), Gaps = 21/174 (12%)
Query: 3 PGSEAVGGRDWG-LEPRSEEQSGRVSPPPRGTARARP---PLRPHPAPR-----PREMAA 53
P SE+ G + ++ + E + + P+ A+ P P P P P P +
Sbjct: 836 PSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQS 895
Query: 54 AAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGA 113
PQ SR + L ++T +P P P + G G+ Q
Sbjct: 896 PKPQEQSRRFSLN--LGSITDAPKSQPTTPQETVTGKLFGF---------GASIFSQASN 944
Query: 114 FVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVR 167
+ A PH G +K A A G P G +P +S+ V+
Sbjct: 945 LIST-AGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVK 997
Score = 27.3 bits (59), Expect = 6.5
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 21/100 (21%)
Query: 23 SGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPL- 81
S + PPP PP P P P P P + ++ K L +P PL
Sbjct: 2402 SAQPPPPP-----PPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLF 2456
Query: 82 -APTSFSPP---RRPGL-----------PTPPRPGATGSG 106
A T+ R GL P PP+P + SG
Sbjct: 2457 DAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSG 2496
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 45.8 bits (107), Expect = 2e-05
Identities = 46/181 (25%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 2 QPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSR 61
QPG + GL +Q G V PP + +PP +P +P + + S
Sbjct: 325 QPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSE 384
Query: 62 SVAEKHLLN----AVTPSPCPAPLAP------TSFSPPRRPGLPTPPR-PGATGSGARQQ 110
K L TP+ P P P T ++PGL +P + PG T + +Q
Sbjct: 385 QPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQP 444
Query: 111 RGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPG--TPLRPGVTTVSPTRSVSVRP 168
+ A Q GP G T + P P P +PG P + S +P
Sbjct: 445 GPGKIPA-----QQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 169 P 169
P
Sbjct: 500 P 500
Score = 44.7 bits (104), Expect = 4e-05
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 18/174 (10%)
Query: 2 QPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAP---QN 58
QPG + + G S +Q+G PP + A+PP P++ A P Q
Sbjct: 443 QPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPP--------PQQPGPAKPPPQQP 494
Query: 59 GSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPP--RPGATGSGARQQRGAFVR 116
GS + + P P P P+ P++PG PP +PG+ A+Q A
Sbjct: 495 GSAKPPSQQPGSTKPPPQQPGPAKPS----PQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
Query: 117 AHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPPK 170
A + T+P G L+ T + PP L + + T + + P+
Sbjct: 551 AQQS-TKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPE 603
Score = 33.5 bits (75), Expect = 0.091
Identities = 45/173 (26%), Positives = 63/173 (36%), Gaps = 23/173 (13%)
Query: 19 SEEQSGRVSPPPRGTAR-----ARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVT 73
S +Q ++ P GT + + P H A P + A+ PQ + +
Sbjct: 240 SSQQPEKIKSQPPGTGKPIQGPTQTPQTDH-AKLPLQRDASRPQTKQADIVRGESVKPSL 298
Query: 74 PSPCPAPLA-PTSFSPP-RRPG----LPTPPRPGATGSG----ARQQRGAF---VRAHAT 120
PSP P+ PT PP ++PG P P +P A SG QQ G V+ T
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT 358
Query: 121 F---TQPHGPLSGGLFLKGATAGRNGAP-PPGTPLRPGVTTVSPTRSVSVRPP 169
QP GP G+ + P P PGV + +PP
Sbjct: 359 TKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPP 411
Score = 28.9 bits (63), Expect = 2.2
Identities = 38/174 (21%), Positives = 60/174 (34%), Gaps = 21/174 (12%)
Query: 3 PGSEAVGGRDWG-LEPRSEEQSGRVSPPPRGTARARP---PLRPHPAPR-----PREMAA 53
P SE+ G + ++ + E + + P+ A+ P P P P P P +
Sbjct: 836 PSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQS 895
Query: 54 AAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGA 113
PQ SR + L ++T +P P P + G G+ Q
Sbjct: 896 PKPQEQSRRFSLN--LGSITDAPKSQPTTPQETVTGKLFGF---------GASIFSQASN 944
Query: 114 FVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVR 167
+ A PH G +K A A G P G +P +S+ V+
Sbjct: 945 LIST-AGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVK 997
Score = 27.3 bits (59), Expect = 6.5
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 21/100 (21%)
Query: 23 SGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPL- 81
S + PPP PP P P P P P + ++ K L +P PL
Sbjct: 2402 SAQPPPPP-----PPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLF 2456
Query: 82 -APTSFSPP---RRPGL-----------PTPPRPGATGSG 106
A T+ R GL P PP+P + SG
Sbjct: 2457 DAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSG 2496
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 45.4 bits (106), Expect = 2e-05
Identities = 46/151 (30%), Positives = 58/151 (38%), Gaps = 14/151 (9%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
++P +E++ G LE E+ P P T P L P PAP P +AA P
Sbjct: 108 LEPAAESLDG----LEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAA--PVAAP 161
Query: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAH-- 118
+VA A P+P PAP AP + P P P A A Q A A+
Sbjct: 162 VAVAVLAPAPAPAPAPAPAP-APVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 220
Query: 119 -----ATFTQPHGPLSGGLFLKGATAGRNGA 144
Q H +SG A A NGA
Sbjct: 221 QRGQEPLADQLHSGISGRPAAGTAAASANGA 251
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 45.4 bits (106), Expect = 2e-05
Identities = 46/151 (30%), Positives = 58/151 (38%), Gaps = 14/151 (9%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
++P +E++ G LE E+ P P T P L P PAP P +AA P
Sbjct: 108 LEPAAESLDG----LEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAA--PVAAP 161
Query: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAH-- 118
+VA A P+P PAP AP + P P P A A Q A A+
Sbjct: 162 VAVAVLAPAPAPAPAPAPAP-APVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 220
Query: 119 -----ATFTQPHGPLSGGLFLKGATAGRNGA 144
Q H +SG A A NGA
Sbjct: 221 QRGQEPLADQLHSGISGRPAAGTAAASANGA 251
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 45.4 bits (106), Expect = 2e-05
Identities = 46/151 (30%), Positives = 58/151 (38%), Gaps = 14/151 (9%)
Query: 1 MQPGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS 60
++P +E++ G LE E+ P P T P L P PAP P +AA P
Sbjct: 119 LEPAAESLDG----LEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAA--PVAAP 172
Query: 61 RSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAH-- 118
+VA A P+P PAP AP + P P P A A Q A A+
Sbjct: 173 VAVAVLAPAPAPAPAPAPAP-APVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 231
Query: 119 -----ATFTQPHGPLSGGLFLKGATAGRNGA 144
Q H +SG A A NGA
Sbjct: 232 QRGQEPLADQLHSGISGRPAAGTAAASANGA 262
>gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sapiens]
Length = 1258
Score = 45.4 bits (106), Expect = 2e-05
Identities = 49/174 (28%), Positives = 62/174 (35%), Gaps = 30/174 (17%)
Query: 16 EPRSEEQSGRVSPPPRGTARARP---PLRPHPAPRPREMAAAAPQNGSRSVA-------E 65
EP +GR PPR R P L+P AP P +AA P+N + A
Sbjct: 934 EPEKPPPTGRPPAPPRAAPREEPLTPRLKPEGAPEPEGVAAPPPKNSFNNPAYYVLEGVP 993
Query: 66 KHLLNAVTPSPCPAPLAPTSFS------PPRRPGLPTPPRPGATGSGARQQRGAF----- 114
LL PSP AP+ + + P + G PR G S + G
Sbjct: 994 HQLLPPEPPSPARAPVPSATKNKVAITVPAPQLGHHRHPRVGEGSSSDEESGGTLPPPDF 1053
Query: 115 ----VRAHATFTQPH-GPLSGGLFLKGATAGRNGAPPPGT----PLRPGVTTVS 159
+ A F P PL G + A G PPP PL PG + S
Sbjct: 1054 PPPPLPDSAIFLPPSLDPLPGPVVRGRGGAEARGPPPPKAHPRPPLPPGPSPAS 1107
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 45.1 bits (105), Expect = 3e-05
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 18 RSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPC 77
+S G PP R PP +P P RP P N + S + A T +P
Sbjct: 733 QSSPAGGHAPTPPTPAPRTMPPTKPQPPARP--PPPVLPANRAPSATAPSPVGAGTAAPA 790
Query: 78 PAPLAPTSFSPPRRPGLPTPPRPGATG 104
P+ P S PP+ G P P PG G
Sbjct: 791 PSQ-TPGSAPPPQAQGPPYPTYPGYPG 816
Score = 31.2 bits (69), Expect = 0.45
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 74 PSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQP 124
P+P P + PT PP RP P P A + A GA A A P
Sbjct: 745 PTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTP 795
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 45.1 bits (105), Expect = 3e-05
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 18 RSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPC 77
+S G PP R PP +P P RP P N + S + A T +P
Sbjct: 728 QSSPAGGHAPTPPTPAPRTMPPTKPQPPARP--PPPVLPANRAPSATAPSPVGAGTAAPA 785
Query: 78 PAPLAPTSFSPPRRPGLPTPPRPGATG 104
P+ P S PP+ G P P PG G
Sbjct: 786 PSQ-TPGSAPPPQAQGPPYPTYPGYPG 811
Score = 31.2 bits (69), Expect = 0.45
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 74 PSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQP 124
P+P P + PT PP RP P P A + A GA A A P
Sbjct: 740 PTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTP 790
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.1 bits (105), Expect = 3e-05
Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 9/152 (5%)
Query: 23 SGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGS--RSVAEKHLLNAVTPSPCPAP 80
S R PP G ++ H P A P G + A + L ++ TP PA
Sbjct: 195 SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 254
Query: 81 LAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPH-GPLSGGLFLKGATA 139
P++ PR P P+ P+P G + R V P GPLS + +
Sbjct: 255 SGPSARGTPRAPAHPSQPKP----KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 310
Query: 140 GRNG--APPPGTPLRPGVTTVSPTRSVSVRPP 169
G PPP P T+ P+ ++ P
Sbjct: 311 GTKARPVPPPDNAATPLPATLPPSPPLATPLP 342
Score = 42.4 bits (98), Expect = 2e-04
Identities = 43/156 (27%), Positives = 52/156 (33%), Gaps = 4/156 (2%)
Query: 17 PRSEEQSGRVSPPPRGT-ARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPS 75
P S S PPP+ A A PPL+ P+P P AP + S S+ L +
Sbjct: 773 PASLPMSPLAKPPPQAPPALATPPLQALPSP-PASFPGQAPFSPSASLPMSPLATPPPQA 831
Query: 76 P--CPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLF 133
P APL SPP P L P RP G A A P S
Sbjct: 832 PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSST 891
Query: 134 LKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
L G + + TP P + PP
Sbjct: 892 LSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 927
Score = 37.4 bits (85), Expect = 0.006
Identities = 53/189 (28%), Positives = 65/189 (34%), Gaps = 42/189 (22%)
Query: 17 PRSEEQSGRVSPPPRGTARAR---PPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVT 73
P E QS ++PP T A PPL P+ P + Q S + HL
Sbjct: 510 PPLETQSS-LAPPSLQTPPASLTTPPLENLPSLAPPPL-----QTASAPLTTPHLETPPC 563
Query: 74 PSPCP--APLAPTSFSPPRRP--------------------GLPTPP-RPGATGSGARQQ 110
P+PCP AP +P + PP P GLP+PP P AT
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPP 623
Query: 111 RGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGA---------PPPGTPLR-PGVTTVSP 160
A A + P P L A A PPP P++ P SP
Sbjct: 624 XLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 683
Query: 161 TRSVSVRPP 169
S S PP
Sbjct: 684 PVSPSATPP 692
Score = 37.0 bits (84), Expect = 0.008
Identities = 30/82 (36%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 25 RVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSP---CPAPL 81
+V+PP + A A PL P P A A L + PSP P PL
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPL 343
Query: 82 APTSFSPPRRPGLPTPPRPGAT 103
AP S S P P L T P P AT
Sbjct: 344 APPSPSAP--PSLQTLPSPPAT 363
Score = 36.6 bits (83), Expect = 0.011
Identities = 49/163 (30%), Positives = 60/163 (36%), Gaps = 24/163 (14%)
Query: 17 PRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEK--HLLNA--- 71
P S S +PPP+ A PPL P P A+ P + S + + LL A
Sbjct: 711 PASPPMSPSATPPPQ----APPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPL 766
Query: 72 -VTPS-PCPAPLAPTSFSPPRR-PGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPL 128
V PS P P++P + PP+ P L TPP A A A+ P PL
Sbjct: 767 QVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL--PMSPL 824
Query: 129 SGGLFLKGATAGRNGAPPPGTPLR--PGVTTVSPTRSVSVRPP 169
AT P PL P SPT RPP
Sbjct: 825 --------ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 859
Score = 32.7 bits (73), Expect = 0.15
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 27 SPPPRGTARA------RPPLRPH---PAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSP- 76
SPPP +A PP+ P P+ P +AA Q A + + TP P
Sbjct: 666 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 725
Query: 77 CPAPLAPTSFSPPRRPGLPTPPRPGAT 103
P PLA P P P P AT
Sbjct: 726 APPPLAAPPLQVPPSPPASPPMSPSAT 752
Score = 32.3 bits (72), Expect = 0.20
Identities = 47/167 (28%), Positives = 59/167 (35%), Gaps = 15/167 (8%)
Query: 2 QPGSEAVGGRDWGLEPRSEEQSGRVSPPPR--GTARARPPLRPHPAPRPREMAAAAPQNG 59
+P +E GG P S ++G P R GT+ P RP PA E A A
Sbjct: 56 KPLAERAGGIGGATIPESAPRAG----PTRSAGTSSRNPASRP-PASGRGERAPPAKNTS 110
Query: 60 SRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHA 119
V+ + T P PL R T R AT + R A R
Sbjct: 111 PGPVSSPGRASGTTR---PGPLGQKGL---RISAEETVARGKATEAPKRSALSAGARRDT 164
Query: 120 TFTQPHGPLSGGLFLKGATAGRN-GAPPPGTPLRPGVTTVSPTRSVS 165
+ P P S + + AG G P P RP T P +SVS
Sbjct: 165 SGPTPGTP-SPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVS 210
Score = 28.9 bits (63), Expect = 2.2
Identities = 40/150 (26%), Positives = 54/150 (36%), Gaps = 23/150 (15%)
Query: 24 GRVSPPPRGTARARPPLRPHP--------APRPREMAAAAPQNGSRSVAEK-----HLLN 70
G ++P P G+ R PP+ P A + +A A G ++ E +
Sbjct: 23 GLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRS 82
Query: 71 AVTPSPCPAPLAPTSFSPPRR-PGLPTPPRP--------GATGSGARQQRGAFVRAHATF 121
A T S PA P S R P T P P G T G Q+G + A T
Sbjct: 83 AGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV 142
Query: 122 TQPHGPLSGGLFLKGATAGRN-GAPPPGTP 150
+ + A A R+ P PGTP
Sbjct: 143 ARGKATEAPKRSALSAGARRDTSGPTPGTP 172
Score = 28.1 bits (61), Expect = 3.8
Identities = 30/111 (27%), Positives = 36/111 (32%), Gaps = 21/111 (18%)
Query: 78 PAPLAPTSFSPPRRPGLPTPPRP---------GATGSGARQQRGAFVRAHATFTQPHGPL 128
PA AP +P R PG P PP P GA G+ R+ T P
Sbjct: 17 PAARAPGLLTP-RPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP 75
Query: 129 SGGLFLKGATAGRNGA-----------PPPGTPLRPGVTTVSPTRSVSVRP 168
G T+ RN A PP PG + S + RP
Sbjct: 76 RAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP 126
Score = 27.7 bits (60), Expect = 5.0
Identities = 34/136 (25%), Positives = 48/136 (35%), Gaps = 16/136 (11%)
Query: 27 SPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSF 86
SPP ++A P + P P + P + H L + + P+PLA +S
Sbjct: 359 SPPATPPSQAPPSMTTPPMQAPPSLQTIPP------IQVPHSLTSPSLQAPPSPLALSSL 412
Query: 87 SPPRRPGLPT--PPRPGATGSGARQQRGAFVRAHATFTQPHG-PLSGGLFLKGATAGRNG 143
G PT T S + Q + T P PL L L
Sbjct: 413 QATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLP-------A 465
Query: 144 APPPGTPLRPGVTTVS 159
+PP T L P V+ +S
Sbjct: 466 SPPLQTSLSPAVSPLS 481
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 45.1 bits (105), Expect = 3e-05
Identities = 52/180 (28%), Positives = 65/180 (36%), Gaps = 42/180 (23%)
Query: 8 VGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPH----PAPRPREMAAAAPQNGSRSV 63
+ G+ G P+ Q R PPP G RPP + P PRP + PQ G++S
Sbjct: 32 ISGKPEGRRPQGGNQPQRTPPPP-GKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ 90
Query: 64 A----------EKHLLNAVTPSPCPAPLAPT---------SFSPPRRPGLPTPPRPGATG 104
+ + P P P P S PP RPG P P P
Sbjct: 91 GPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP---- 146
Query: 105 SGARQQRGAFVRAHATFTQPHG-PLSGGLFLKGAT--AGRNGAPPP-------GTPLRPG 154
G Q +G R +P G P GG +G G+ PPP G P RPG
Sbjct: 147 QGGNQSQGPPPRP----GKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPG 202
Score = 43.9 bits (102), Expect = 7e-05
Identities = 51/179 (28%), Positives = 65/179 (36%), Gaps = 42/179 (23%)
Query: 9 GGRDWGLEPRSEEQSGRVSPPPRGTARAR-PPLRPH---------------PAPRPREMA 52
G + G PR + G PPP+G +++ PP RP P PRP +
Sbjct: 107 GNQSQGPPPRPGKPEG---PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 163
Query: 53 AAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRG 112
PQ G++S + P P S PP RPG P P P G Q +G
Sbjct: 164 GPPPQGGNQSQGPPP--HPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP----QGGNQSQG 217
Query: 113 AFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTR--SVSVRPP 169
R +P GP S G G P G P PG P + + RPP
Sbjct: 218 PPPRP----GKPEGPPSQG-----------GNKPQGPPPHPGKPQGPPPQEGNKPQRPP 261
>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
sapiens]
Length = 319
Score = 44.7 bits (104), Expect = 4e-05
Identities = 49/128 (38%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 28 PPPRGTARAR-PPLRPHPAPRPREMAA---AAPQNGSRSVAEKHLLNAVTPSPCPAPLAP 83
PP R R + PP +PHPAP+P A A Q GSR V ++ LL P+ A L
Sbjct: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSR-VLQQLLL---VPNFILAGLRE 74
Query: 84 TSFSPPRRPGLPTPPRPGATGS--GARQQRGAFVRAHATFTQPHGPL--SGGLFLKGATA 139
T +P RR P G T + G R +R + H QP GP S L L+G+ A
Sbjct: 75 T--NPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTH----QPQGPRPPSEALALEGSCA 128
Query: 140 GRNGAPPP 147
GR PPP
Sbjct: 129 GR---PPP 133
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 43.5 bits (101), Expect = 9e-05
Identities = 32/96 (33%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 19 SEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTP-SPC 77
S +G PP +PP P PAP P+ P ++ L A TP SP
Sbjct: 1441 SANSNGTPEPP---LLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPP 1497
Query: 78 PAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGA 113
P PL P PP P P PP P A A + A
Sbjct: 1498 PPPLPPP--PPPAMPSPPPPPPPAAAPLAAPPEEPA 1531
Score = 39.7 bits (91), Expect = 0.001
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 16 EPRSEEQSGRVSPPPRGTARARPPLRPHPA----PRPREMAAAAPQNGSRSVAEKHLLNA 71
EP E+ +PPP T + +PP P P P P + A P + A
Sbjct: 1449 EPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPA 1508
Query: 72 V-TPSPCPAPLAPTSFSPPRRPGLPTPPRP 100
+ +P P P P A +PP P P+P P
Sbjct: 1509 MPSPPPPPPPAAAPLAAPPEEPAAPSPEDP 1538
Score = 33.1 bits (74), Expect = 0.12
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 38 PPLRPHPA-PRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPL---APTSFSPPRRPG 93
PPL P A P P + N + + L P+P PAP P PP +P
Sbjct: 1422 PPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPA 1481
Query: 94 LPTPP 98
LP+PP
Sbjct: 1482 LPSPP 1486
Score = 32.7 bits (73), Expect = 0.15
Identities = 37/139 (26%), Positives = 48/139 (34%), Gaps = 9/139 (6%)
Query: 36 ARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLP 95
AR P P P R A P + S A A P P P TS PP +
Sbjct: 1663 ARKPWHRPPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKP-ETPEKTTSEKPPEQTPET 1721
Query: 96 TPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAP----PPGTPL 151
P P A + + + T+ PL G + AT+GR P G P
Sbjct: 1722 AMPEPPAPEKPSLLRPVEKEKEKEKVTRGERPLRG----ERATSGRQTRPERSLATGQPA 1777
Query: 152 RPGVTTVSPTRSVSVRPPK 170
+ PT+ + PPK
Sbjct: 1778 TSRLPKARPTKVKAEPPPK 1796
Score = 29.3 bits (64), Expect = 1.7
Identities = 43/154 (27%), Positives = 54/154 (35%), Gaps = 22/154 (14%)
Query: 28 PPPRGTARARPPLRPHPA-------PRPREMAAAAPQNGSRSVAEKHLLNAVTPSPCPAP 80
PPP TA++ P PH P + PQ + L +A +PSP +
Sbjct: 765 PPPPPTAQSTQPT-PHGLLLEAGGPDLPLVLPPPPPQ-----LLPSVLSHAPSPSPSASK 818
Query: 81 LAPTSFSPPRRPGLPTPPRPGATGSGARQ-QRGAFVRAHATFTQPHGPL-----SGGLFL 134
+ P R G P PP P Q A +R+H +P P L
Sbjct: 819 VGVHLLEPATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHG--LEPAAPSPRLRPEESLDP 876
Query: 135 KGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRP 168
GA GA P P PG T V P S P
Sbjct: 877 PGAMQELLGALEP-LPPAPGDTGVGPPNSEGKDP 909
Score = 28.5 bits (62), Expect = 2.9
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 9 GGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHL 68
G R + + Q SPP G L P+ P ++ G +A +
Sbjct: 158 GSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSL----GFERLAGGGV 213
Query: 69 LNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRP 100
L PA L P +PP RPG P PP P
Sbjct: 214 LG-------PAGLGPAQ-TPPYRPGPPDPPPP 237
Score = 28.1 bits (61), Expect = 3.8
Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 18/100 (18%)
Query: 73 TPSPCPAPLAPTSF--SPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSG 130
T +P PLAP + PP PGLP+ G +++ A QP P
Sbjct: 1416 TSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP--- 1472
Query: 131 GLFLKGATAGRNGAPPPGTPLRPG-VTTVSPTRSVSVRPP 169
PPP P P V+PT S PP
Sbjct: 1473 ------------PPPPPPQPALPSPPPLVAPTPSSPPPPP 1500
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 43.1 bits (100), Expect = 1e-04
Identities = 41/160 (25%), Positives = 60/160 (37%), Gaps = 4/160 (2%)
Query: 3 PGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRS 62
P + + R W PR GR+S PPR + RP P R +
Sbjct: 137 PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQ 196
Query: 63 VAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFT 122
E+ + + P A L P+ + P R P P +G+R RG R A +
Sbjct: 197 AWEQRSSHFLAPEGSVASLLPS--AKPARAPRPAPRAREEAAAGSR-GRGGAERPAARGS 253
Query: 123 QPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTR 162
PL+ L + + A P PL+P + + SP R
Sbjct: 254 AQQPPLARLLLASAVSLAASLARSP-PPLQPRLGSASPPR 292
Score = 36.6 bits (83), Expect = 0.011
Identities = 43/159 (27%), Positives = 58/159 (36%), Gaps = 16/159 (10%)
Query: 15 LEPRSEEQSGRVSPPPRGTARA-----RPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLL 69
L P E + SPP GT R + HP P P+ +AA + R L
Sbjct: 101 LSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRL 160
Query: 70 NAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLS 129
+A P P P SF RRP P R + ++ A+ + + F P G ++
Sbjct: 161 SA---PPRHGP-HPQSF---RRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVA 213
Query: 130 GGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRP 168
L A R AP P R S R + RP
Sbjct: 214 S--LLPSAKPAR--APRPAPRAREEAAAGSRGRGGAERP 248
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 43.1 bits (100), Expect = 1e-04
Identities = 41/160 (25%), Positives = 60/160 (37%), Gaps = 4/160 (2%)
Query: 3 PGSEAVGGRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRS 62
P + + R W PR GR+S PPR + RP P R +
Sbjct: 137 PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQ 196
Query: 63 VAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFT 122
E+ + + P A L P+ + P R P P +G+R RG R A +
Sbjct: 197 AWEQRSSHFLAPEGSVASLLPS--AKPARAPRPAPRAREEAAAGSR-GRGGAERPAARGS 253
Query: 123 QPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTR 162
PL+ L + + A P PL+P + + SP R
Sbjct: 254 AQQPPLARLLLASAVSLAASLARSP-PPLQPRLGSASPPR 292
Score = 36.6 bits (83), Expect = 0.011
Identities = 43/159 (27%), Positives = 58/159 (36%), Gaps = 16/159 (10%)
Query: 15 LEPRSEEQSGRVSPPPRGTARA-----RPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLL 69
L P E + SPP GT R + HP P P+ +AA + R L
Sbjct: 101 LSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRL 160
Query: 70 NAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLS 129
+A P P P SF RRP P R + ++ A+ + + F P G ++
Sbjct: 161 SA---PPRHGP-HPQSF---RRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVA 213
Query: 130 GGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRP 168
L A R AP P R S R + RP
Sbjct: 214 S--LLPSAKPAR--APRPAPRAREEAAAGSRGRGGAERP 248
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 43.1 bits (100), Expect = 1e-04
Identities = 42/142 (29%), Positives = 50/142 (35%), Gaps = 16/142 (11%)
Query: 17 PRSEEQSGRVSPPPR--GTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTP 74
P EE + +PPP GT P PA P + R + L + P
Sbjct: 85 PPPEEAAAVSAPPPAPAGTLLPGPSKWQKPAGTPVPRIRRLLEASHRGQGDPPSLRPLKP 144
Query: 75 SPCP--------APLAPTSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHG 126
P P P AP+ F PP P PP P R+ A AT P
Sbjct: 145 PPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLPSERQPADRR----ITPALATPASPPT 200
Query: 127 PLSGGLFLKGATAG--RNGAPP 146
G +G TAG R GAPP
Sbjct: 201 ESQAGPRNQGQTAGRARGGAPP 222
Score = 36.6 bits (83), Expect = 0.011
Identities = 43/154 (27%), Positives = 51/154 (33%), Gaps = 37/154 (24%)
Query: 27 SPPPRGTARARPPLRPHPAPRPREMAAA----------APQNGSRSVAEKHLLNAVTPSP 76
SPPP PP + H AP PR A A AP NG L + P P
Sbjct: 389 SPPP-------PPEQIHSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLP 441
Query: 77 CPAPLAPTSFSPPRRPGLPTPPRPGAT-GSGARQQRGAFVRAHATFTQPHGPLSGGLFLK 135
P P P + PP P P P T G G ++ A P +
Sbjct: 442 PPTP--PPTLQPPALQPTPLPVAPPLTPGLGHKESALA-------------PTAAPALPP 486
Query: 136 GATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
A + AP P P T P+ VS P
Sbjct: 487 ALAADQAPAPSPA----PAPTVAEPSPPVSAPAP 516
Score = 32.0 bits (71), Expect = 0.26
Identities = 39/137 (28%), Positives = 46/137 (33%), Gaps = 23/137 (16%)
Query: 28 PPPRGTARARPP-LRPHPAPRPREM--------AAAAPQNGSRSVAEKHLLNAVTPSPCP 78
PPP +PP L+P P P + +A AP A PSP P
Sbjct: 441 PPPTPPPTLQPPALQPTPLPVAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAP 500
Query: 79 APLAPTSFSPPRRPGLPTPPRPGAT--GSGARQQRGAF---------VRAHATFTQPHGP 127
AP P P P T G+R RGA R AT T P
Sbjct: 501 APTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGDGPRERATATVPDSS 560
Query: 128 LSGGLFLKGATAGRNGA 144
GG G+ A + GA
Sbjct: 561 GGGG---GGSGASQTGA 574
>gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 42.7 bits (99), Expect = 1e-04
Identities = 49/126 (38%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 28 PPPRGTARAR-PPLRPHPAPRPREMAA---AAPQNGSRSVAEKHLLNAVTPSPCPAPLAP 83
PP R R + PP +PHPAP+P A A Q GSR V ++ LL P+ A L
Sbjct: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSR-VLQQLLL---VPNFILAGLRE 74
Query: 84 TSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPL--SGGLFLKGATAGR 141
T +P RR P G T + A + RG T QP GP S L L+G+ AGR
Sbjct: 75 T--NPWRRESREAEPGSGKT-NAAWRWRGKRSDGGQTH-QPQGPRPPSEALALEGSCAGR 130
Query: 142 NGAPPP 147
PPP
Sbjct: 131 ---PPP 133
>gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo
sapiens]
Length = 319
Score = 42.7 bits (99), Expect = 1e-04
Identities = 49/126 (38%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 28 PPPRGTARAR-PPLRPHPAPRPREMAA---AAPQNGSRSVAEKHLLNAVTPSPCPAPLAP 83
PP R R + PP +PHPAP+P A A Q GSR V ++ LL P+ A L
Sbjct: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSR-VLQQLLL---VPNFILAGLRE 74
Query: 84 TSFSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPL--SGGLFLKGATAGR 141
T +P RR P G T + A + RG T QP GP S L L+G+ AGR
Sbjct: 75 T--NPWRRESREAEPGSGKT-NAAWRWRGKRSDGGQTH-QPQGPRPPSEALALEGSCAGR 130
Query: 142 NGAPPP 147
PPP
Sbjct: 131 ---PPP 133
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 42.7 bits (99), Expect = 1e-04
Identities = 47/168 (27%), Positives = 61/168 (36%), Gaps = 30/168 (17%)
Query: 16 EPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPRE-MAAAAPQNGSRSVAEKHLLNAVTP 74
+ R Q G P P G R PPL+ P P+ ++ ++ P GS L P
Sbjct: 458 QQRPPPQGGPPQPGP-GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSP-------LPQRLP 509
Query: 75 SPCPAPLAPTS-FSPPRR------------PGLPTPPRPGATGSGARQQRGAFVRAHATF 121
SP AP P S +PP + PG P RP A+ S RQ +
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV 569
Query: 122 TQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
+ P P + G G+ PP P P PTR S P
Sbjct: 570 SGPAPPKASG----APPGGQQRQGPPQKPPGP----AGPTRQASQAGP 609
Score = 35.0 bits (79), Expect = 0.031
Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)
Query: 20 EEQSGRVSPPPRGTARARPPLR--PHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPC 77
++ + + +PP +G R P+ P P R A+ +PQ + + P+P
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP 575
Query: 78 PAPLAPTS----FSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLF 133
A AP PP++P P P A+ +G + G +P GP
Sbjct: 576 KASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQ---PRPSGP------ 626
Query: 134 LKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
G G P P +P P + + PP
Sbjct: 627 ------GPAGRPKPQLAQKPSQDVPPPATAAAGGPP 656
Score = 32.0 bits (71), Expect = 0.26
Identities = 32/123 (26%), Positives = 41/123 (33%), Gaps = 13/123 (10%)
Query: 50 EMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQ 109
+MA A P+ R + + TPSP PL + P P P P G
Sbjct: 413 KMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPP----QGGPP 468
Query: 110 QRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPL---RPGVTTVSPTRSVSV 166
Q G + Q P G L G PP G+PL P T+ +
Sbjct: 469 QPGPGPQRQGPPLQQRPPPQGQQHLSGL------GPPAGSPLPQRLPSPTSAPQQPASQA 522
Query: 167 RPP 169
PP
Sbjct: 523 APP 525
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 42.7 bits (99), Expect = 1e-04
Identities = 47/168 (27%), Positives = 61/168 (36%), Gaps = 30/168 (17%)
Query: 16 EPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPRE-MAAAAPQNGSRSVAEKHLLNAVTP 74
+ R Q G P P G R PPL+ P P+ ++ ++ P GS L P
Sbjct: 458 QQRPPPQGGPPQPGP-GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSP-------LPQRLP 509
Query: 75 SPCPAPLAPTS-FSPPRR------------PGLPTPPRPGATGSGARQQRGAFVRAHATF 121
SP AP P S +PP + PG P RP A+ S RQ +
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV 569
Query: 122 TQPHGPLSGGLFLKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
+ P P + G G+ PP P P PTR S P
Sbjct: 570 SGPAPPKASG----APPGGQQRQGPPQKPPGP----AGPTRQASQAGP 609
Score = 35.0 bits (79), Expect = 0.031
Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)
Query: 20 EEQSGRVSPPPRGTARARPPLR--PHPAPRPREMAAAAPQNGSRSVAEKHLLNAVTPSPC 77
++ + + +PP +G R P+ P P R A+ +PQ + + P+P
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP 575
Query: 78 PAPLAPTS----FSPPRRPGLPTPPRPGATGSGARQQRGAFVRAHATFTQPHGPLSGGLF 133
A AP PP++P P P A+ +G + G +P GP
Sbjct: 576 KASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQ---PRPSGP------ 626
Query: 134 LKGATAGRNGAPPPGTPLRPGVTTVSPTRSVSVRPP 169
G G P P +P P + + PP
Sbjct: 627 ------GPAGRPKPQLAQKPSQDVPPPATAAAGGPP 656
Score = 32.0 bits (71), Expect = 0.26
Identities = 32/123 (26%), Positives = 41/123 (33%), Gaps = 13/123 (10%)
Query: 50 EMAAAAPQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPPRRPGLPTPPRPGATGSGARQ 109
+MA A P+ R + + TPSP PL + P P P P G
Sbjct: 413 KMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPP----QGGPP 468
Query: 110 QRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPGTPL---RPGVTTVSPTRSVSV 166
Q G + Q P G L G PP G+PL P T+ +
Sbjct: 469 QPGPGPQRQGPPLQQRPPPQGQQHLSGL------GPPAGSPLPQRLPSPTSAPQQPASQA 522
Query: 167 RPP 169
PP
Sbjct: 523 APP 525
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,018,461
Number of Sequences: 37866
Number of extensions: 806593
Number of successful extensions: 10370
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 1316
Number of HSP's that attempted gapping in prelim test: 5929
Number of HSP's gapped (non-prelim): 4252
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.