Search of human proteins with 239746990

Search of human proteins with 239746990

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746990 PREDICTED: hypothetical protein XP_002344480 [Homo
sapiens]
         (114 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757954 PREDICTED: similar to hCG1818242 [Homo sapiens]          231   9e-62
gi|239752461 PREDICTED: hypothetical protein XP_002348283 [Homo ...   231   9e-62
gi|239746990 PREDICTED: hypothetical protein XP_002344480 [Homo ...   231   9e-62
gi|239746988 PREDICTED: hypothetical protein XP_002344243 [Homo ...   146   4e-36
gi|239757952 PREDICTED: similar to hCG2041502 [Homo sapiens]          132   5e-32
gi|239752463 PREDICTED: hypothetical protein XP_002348284 [Homo ...   132   5e-32
gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens]            31   0.18 
gi|15147346 fibroblast growth factor 8 isoform F precursor [Homo...    29   0.92 
gi|118150678 epithelial cell transforming sequence 2 oncogene-li...    29   0.92 
gi|21361910 zinc finger, DHHC domain containing 12 [Homo sapiens]      29   0.92 
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    28   1.2  
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    28   1.2  
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    28   1.2  
gi|60499001 pipecolic acid oxidase [Homo sapiens]                      27   2.7  
gi|38348414 von Willebrand factor C domain containing 2 [Homo sa...    27   2.7  
gi|7669481 BCL2/adenovirus E1B 19kD-interacting protein 3 [Homo ...    27   3.5  
gi|239753457 PREDICTED: hypothetical protein XP_002345662 [Homo ...    27   3.5  
gi|239748022 PREDICTED: hypothetical protein XP_002346495 [Homo ...    27   3.5  
gi|239741918 PREDICTED: hypothetical protein XP_002342351 [Homo ...    27   3.5  
gi|219842266 usherin isoform B [Homo sapiens]                          27   4.6  
gi|219842259 usherin isoform A [Homo sapiens]                          27   4.6  
gi|21396500 HIRA interacting protein 3 [Homo sapiens]                  27   4.6  
gi|24308167 SV2 related protein [Homo sapiens]                         27   4.6  
gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo ...    27   4.6  
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]               26   5.9  
gi|171916097 repetin [Homo sapiens]                                    26   5.9  
gi|29029632 anaplastic lymphoma kinase [Homo sapiens]                  26   7.8  
gi|27894376 cell adhesion molecule with homology to L1CAM precur...    26   7.8  
gi|83415184 transmembrane and tetratricopeptide repeat containin...    26   7.8  

>gi|239757954 PREDICTED: similar to hCG1818242 [Homo sapiens]
          Length = 114

 Score =  231 bits (589), Expect = 9e-62
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
           MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE
Sbjct: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60

Query: 61  STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR 114
           STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR
Sbjct: 61  STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR 114


>gi|239752461 PREDICTED: hypothetical protein XP_002348283 [Homo
           sapiens]
          Length = 114

 Score =  231 bits (589), Expect = 9e-62
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
           MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE
Sbjct: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60

Query: 61  STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR 114
           STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR
Sbjct: 61  STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR 114


>gi|239746990 PREDICTED: hypothetical protein XP_002344480 [Homo
           sapiens]
          Length = 114

 Score =  231 bits (589), Expect = 9e-62
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
           MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE
Sbjct: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60

Query: 61  STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR 114
           STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR
Sbjct: 61  STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLPALSSR 114


>gi|239746988 PREDICTED: hypothetical protein XP_002344243 [Homo
           sapiens]
          Length = 212

 Score =  146 bits (368), Expect = 4e-36
 Identities = 84/148 (56%), Positives = 89/148 (60%), Gaps = 43/148 (29%)

Query: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
           MKTQDDG+LPP+DVKQL  WDLNLSLFLGLCLMLLLAAS LP P IMGLSH  NRED QE
Sbjct: 1   MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60

Query: 61  STADAPP-------------------------------------------QRIKSQEDGE 77
           STADAPP                                            RI SQED  
Sbjct: 61  STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120

Query: 78  VSPNDVKHVRSWEPNSRLIQVALQTDLL 105
           V P+D+KHV SWEPNS+LIQV LQT LL
Sbjct: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLL 148



 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query: 3   TQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQEST 62
           +Q+D V+PP+D+K +  W+ N  L   +    LL+ S +P   IMGLS  S+R+D  EST
Sbjct: 115 SQEDVVVPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGEST 174

Query: 63  ADAPPQRIKS 72
           A+APP R  S
Sbjct: 175 ANAPPSRSPS 184


>gi|239757952 PREDICTED: similar to hCG2041502 [Homo sapiens]
          Length = 192

 Score =  132 bits (333), Expect = 5e-32
 Identities = 75/139 (53%), Positives = 82/139 (58%), Gaps = 43/139 (30%)

Query: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
           MKTQDDG+LPP+DVKQL  WDLNLSLFLGLCLMLLLAAS LP P IMGLSH  NRED QE
Sbjct: 1   MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60

Query: 61  STADAPP-------------------------------------------QRIKSQEDGE 77
           STADAPP                                            RI SQED  
Sbjct: 61  STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120

Query: 78  VSPNDVKHVRSWEPNSRLI 96
           V P+D+KHV SWEPNS+++
Sbjct: 121 VPPHDMKHVHSWEPNSKIM 139



 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 20/70 (28%)

Query: 3   TQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQEST 62
           +Q+D V+PP+D+K +  W+ N                      IMGLS  S+R+D  EST
Sbjct: 115 SQEDVVVPPHDMKHVHSWEPNSK--------------------IMGLSCGSHRKDRGEST 154

Query: 63  ADAPPQRIKS 72
           A+APP R  S
Sbjct: 155 ANAPPSRSPS 164


>gi|239752463 PREDICTED: hypothetical protein XP_002348284 [Homo
           sapiens]
          Length = 192

 Score =  132 bits (333), Expect = 5e-32
 Identities = 75/139 (53%), Positives = 82/139 (58%), Gaps = 43/139 (30%)

Query: 1   MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
           MKTQDDG+LPP+DVKQL  WDLNLSLFLGLCLMLLLAAS LP P IMGLSH  NRED QE
Sbjct: 1   MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60

Query: 61  STADAPP-------------------------------------------QRIKSQEDGE 77
           STADAPP                                            RI SQED  
Sbjct: 61  STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120

Query: 78  VSPNDVKHVRSWEPNSRLI 96
           V P+D+KHV SWEPNS+++
Sbjct: 121 VPPHDMKHVHSWEPNSKIM 139



 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 20/70 (28%)

Query: 3   TQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQEST 62
           +Q+D V+PP+D+K +  W+ N                      IMGLS  S+R+D  EST
Sbjct: 115 SQEDVVVPPHDMKHVHSWEPNSK--------------------IMGLSCGSHRKDRGEST 154

Query: 63  ADAPPQRIKS 72
           A+APP R  S
Sbjct: 155 ANAPPSRSPS 164


>gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens]
          Length = 772

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 39  SCLPFPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDV-KHVRSWEPNSRLIQ 97
           SCLP+   +G +H  N   S   +AD PP     +   E   + + K +   E  +R ++
Sbjct: 563 SCLPYLEHVGHNHTYNMAPSALDSADLPPPSALKKGSKEKQADFLDKQMSRDEHRARAMK 622

Query: 98  VALQTDLLVSLP 109
           +    D +++LP
Sbjct: 623 IPFTNDKIINLP 634


>gi|15147346 fibroblast growth factor 8 isoform F precursor [Homo
          sapiens]
          Length = 244

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 19/57 (33%), Positives = 24/57 (42%)

Query: 31 CLMLLLAASCLPFPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVKHVR 87
          CL+L L   CL      G      RE +    A   PQ +  Q   + SPN  +HVR
Sbjct: 10 CLLLHLLVLCLQAQEGPGRGPALGRELASLFRAGREPQGVSQQVTVQSSPNFTQHVR 66


>gi|118150678 epithelial cell transforming sequence 2 oncogene-like
           [Homo sapiens]
          Length = 904

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 47  MGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLV 106
           MG+++  N +D+ ++ AD   +   S+ED E    +V    SW+  SRL +  L  + L+
Sbjct: 499 MGMTNILNNQDTAQALADGLMEL--SKEDSE---RNVVEDNSWDTKSRLSKNDLNFEALI 553

Query: 107 SL 108
           +L
Sbjct: 554 NL 555


>gi|21361910 zinc finger, DHHC domain containing 12 [Homo sapiens]
          Length = 267

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 16 QLRGWDLNLSLFLGLCLMLLLAASCLPF-------PGIMGLSHRSNREDSQESTADAPP 67
          +LR W+    L L L  +LL+  S L +       PG + +  +   E  +E TA  PP
Sbjct: 34 ELRQWEEQGELLLPLTFLLLVLGSLLLYLAVSLMDPGYVNVQPQPQEELKEEQTAMVPP 92


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
            sapiens]
          Length = 2191

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 5    DDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASC---LPFPGIMGLSHRSNREDSQES 61
            DD  +  +++ QL G+   L  +   CL+ +        +  P    L H + R+D  +S
Sbjct: 1606 DDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQS 1665

Query: 62   TADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLP 109
             AD      K +ED E   +D +     E +S   +   ++ + ++ P
Sbjct: 1666 LAD---DSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAP 1710


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
            sapiens]
          Length = 2231

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 5    DDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASC---LPFPGIMGLSHRSNREDSQES 61
            DD  +  +++ QL G+   L  +   CL+ +        +  P    L H + R+D  +S
Sbjct: 1646 DDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQS 1705

Query: 62   TADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLP 109
             AD      K +ED E   +D +     E +S   +   ++ + ++ P
Sbjct: 1706 LAD---DSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAP 1750


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
            sapiens]
          Length = 2178

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 5    DDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASC---LPFPGIMGLSHRSNREDSQES 61
            DD  +  +++ QL G+   L  +   CL+ +        +  P    L H + R+D  +S
Sbjct: 1593 DDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQS 1652

Query: 62   TADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSLP 109
             AD      K +ED E   +D +     E +S   +   ++ + ++ P
Sbjct: 1653 LAD---DSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAP 1697


>gi|60499001 pipecolic acid oxidase [Homo sapiens]
          Length = 390

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 26  LFLGLCLMLLLAASCLPFPGIMGLS-HRSNREDSQESTADAPPQRIKSQEDGEVSPNDVK 84
           L+LGLC   +       +PG+M +S H  N  D +E   D P  R    +   +S     
Sbjct: 247 LWLGLCPHHIYGLPTGEYPGLMKVSYHHGNHADPEE--RDCPTARTDIGDVQILSSFVRD 304

Query: 85  HVRSWEPNSRLIQVALQTD 103
           H+   +P   +I+  + T+
Sbjct: 305 HLPDLKPEPAVIESCMYTN 323


>gi|38348414 von Willebrand factor C domain containing 2 [Homo
          sapiens]
          Length = 325

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 22 LNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPN 81
          L+ SL +  CLM+ L +  +P   +     +  +E  + +T D P    +  E G  + +
Sbjct: 12 LSSSLLVTCCLMVALCSPSIPLEKLAQAPEQPGQEKREHATRDGPG---RVNELGRPARD 68

Query: 82 DVKHVRSWEPNS 93
          +    R W+  S
Sbjct: 69 EGGSGRDWKSKS 80


>gi|7669481 BCL2/adenovirus E1B 19kD-interacting protein 3 [Homo
          sapiens]
          Length = 194

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 46 IMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVKHV 86
          ++   H S R  S+ S  D+PP+    Q+    S  D   +
Sbjct: 47 LLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSI 87


>gi|239753457 PREDICTED: hypothetical protein XP_002345662 [Homo
           sapiens]
          Length = 319

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 37  AASCLPFPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVKHVRSWEP 91
           A +CL  PG++G    + R      +  APP    S EDG  S +  +  R+  P
Sbjct: 107 APACLALPGLLGAGWGACRPALYGPSLCAPPSLRGSAEDGGRSGSCTRLPRAQPP 161


>gi|239748022 PREDICTED: hypothetical protein XP_002346495 [Homo
           sapiens]
          Length = 287

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 37  AASCLPFPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVKHVRSWEP 91
           A +CL  PG++G    + R      +  APP    S EDG  S +  +  R+  P
Sbjct: 107 APACLALPGLLGAGWGACRPALYGPSLCAPPSLRGSAEDGGRSGSCTRLPRAQPP 161


>gi|239741918 PREDICTED: hypothetical protein XP_002342351 [Homo
           sapiens]
          Length = 319

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 37  AASCLPFPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVKHVRSWEP 91
           A +CL  PG++G    + R      +  APP    S EDG  S +  +  R+  P
Sbjct: 107 APACLALPGLLGAGWGACRPALYGPSLCAPPSLRGSAEDGGRSGSCTRLPRAQPP 161


>gi|219842266 usherin isoform B [Homo sapiens]
          Length = 5202

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 61   STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDL 104
            +TA APPQR+   +  ++S  ++ HV  W P + L  + ++ +L
Sbjct: 1237 TTAQAPPQRLSPPKMQKISSTEL-HV-EWSPPAELNGIIIRYEL 1278


>gi|219842259 usherin isoform A [Homo sapiens]
          Length = 1546

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 61   STADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDL 104
            +TA APPQR+   +  ++S  ++ HV  W P + L  + ++ +L
Sbjct: 1237 TTAQAPPQRLSPPKMQKISSTEL-HV-EWSPPAELNGIIIRYEL 1278


>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
          Length = 556

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 44  PGIMGLSHRSNREDSQESTADAPPQRIKSQEDGEVSPNDVK 84
           PG   +S +  RE+S+ES A+ P QR   + +G      +K
Sbjct: 182 PGKASVSRKQAREESEESEAE-PVQRTAKKVEGNKGTKSLK 221


>gi|24308167 SV2 related protein [Homo sapiens]
          Length = 548

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 22  LNLSLFLGLCLMLLLAASCLPFPGI-MGLSHRSNREDSQE 60
           L L+++ G CL+  LA+  LP      GL   S+RE  QE
Sbjct: 489 LTLAVYSGCCLLAALASCFLPIETKGRGLQESSHREWGQE 528


>gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo
           sapiens]
          Length = 592

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 37  AASCLPFPGIMGLSHRSNREDS--QESTADAPPQRIKSQEDGEVSPND 82
           A  CLP+  +   S   N +DS  +++ +  P     SQ +GE+S  D
Sbjct: 449 APDCLPYDSLSFTSRMYNEDDSVVEKAVSVRPEAAPASQLEGEMSGQD 496


>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
          Length = 532

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 59  QESTADAPPQRIKSQEDGEVSPNDVKHVRSWEPNSRLIQVALQTDLLVSL 108
           + S++D+ P        G+     V+  + W+P   LI+    TD+  +L
Sbjct: 463 ESSSSDSDPDSASPPSTGQNPSVSVQTSQDWKPTRSLIEHVFVTDVTANL 512


>gi|171916097 repetin [Homo sapiens]
          Length = 784

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 43  FPGIMGLSHRSNREDSQESTADAPPQRIKSQEDGE 77
           FPG  G  HR   E+ ++++  + P+R    +DG+
Sbjct: 113 FPGNTGRQHRQRHEEERQNSHHSQPER----QDGD 143


>gi|29029632 anaplastic lymphoma kinase [Homo sapiens]
          Length = 1620

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 22   LNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNRE 56
            L LSL L +    L+AA  L F GIM +  R ++E
Sbjct: 1031 LPLSLILSVVTSALVAALVLAFSGIMIVYRRKHQE 1065


>gi|27894376 cell adhesion molecule with homology to L1CAM precursor
            [Homo sapiens]
          Length = 1224

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 12   YDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQESTADAPPQRIK 71
            YD    +GW + L   + L L LLL   C       G      +ED      D   Q +K
Sbjct: 1090 YDDISTQGWFIGLMCAIAL-LTLLLLTVCFVKRNRGGKYSVKEKEDLH---PDPEIQSVK 1145

Query: 72   SQEDGEVSPNDVKHVR-SWEPNSRLIQVALQTDLLV 106
             +  GE S +D K ++ S    +R +Q     D LV
Sbjct: 1146 DETFGEYSDSDEKPLKGSLRSLNRDMQPTESADSLV 1181


>gi|83415184 transmembrane and tetratricopeptide repeat containing 1
           [Homo sapiens]
          Length = 774

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 22  LNLSLFLGLCLMLLLAASCLPFPG--IMGLSHRSNREDSQESTADAPPQRIKSQEDGEVS 79
           L LSLFLG C ML+       F    +  L   SN++D   + A  P      Q+ G   
Sbjct: 97  LLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSNKQDKSSNGALCPR---SPQQPGSPQ 153

Query: 80  PNDV 83
           P+ +
Sbjct: 154 PSSL 157


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,731,112
Number of Sequences: 37866
Number of extensions: 187777
Number of successful extensions: 655
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 620
Number of HSP's gapped (non-prelim): 39
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.