Guide to the Human Genome
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Name: ECT2L Sequence: fasta or formatted (904aa) NCBI GI: 118150678
Description:

epithelial cell transforming sequence 2 oncogene-like

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         49           3
 C cysteine            1.9         17           2
 D aspartate           4.8         43           2
 E glutamate           7.0         63           3
 F phenylalanine       5.3         48           2
 G glycine             3.9         35           2
 H histidine           2.4         22           1
 I isoleucine          6.0         54           2
 K lysine              6.6         60           2
 L leucine            11.8        107           3
 M methionine          1.8         16           1
 N asparagine          3.7         33           2
 P proline             3.7         33           2
 Q glutamine           4.6         42           1
 R arginine            6.2         56           2
 S serine              8.4         76           2
 T threonine           5.4         49           2
 V valine              5.5         50           2
 W tryptophan          2.4         22           1
 Y tyrosine            3.2         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epithelial cell transforming sequence 2 oncogene-li... 
FBXO16                0.076   F-box only protein 16 
ECT2                  0.047   epithelial cell transforming sequence 2 oncogene pro...
RASGRF1               0.039   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.039   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF2               0.035   Ras protein-specific guanine nucleotide-releasing fa...
BCR                   0.034   breakpoint cluster region isoform 2 
BCR                   0.034   breakpoint cluster region isoform 1 
ARHGEF10L             0.033   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10L             0.033   Rho guanine nucleotide exchange factor (GEF) 10-like...
ABR                   0.031   active breakpoint cluster region-related  protein i...
ABR                   0.031   active breakpoint cluster region-related  protein is...
ABR                   0.031   active breakpoint cluster region-related  protein is...
ARHGEF17              0.031   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
ARHGEF10              0.031   Rho guanine nucleotide exchange factor 10 
PREX1                 0.029   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
FGD4                  0.029   FYVE, RhoGEF and PH domain containing 4 
FARP2                 0.028   FERM, RhoGEF and pleckstrin domain protein 2 
PLEKHG1               0.027   pleckstrin homology domain containing, family G (wit...
FGD2                  0.026   FYVE, RhoGEF and PH domain containing 2 
FGD1                  0.023   faciogenital dysplasia protein 
NET1                  0.022   neuroepithelial cell transforming gene 1 isoform 1 ...
NET1                  0.022   neuroepithelial cell transforming gene 1 isoform 2 [...
ITSN1                 0.022   intersectin 1 isoform ITSN-l 
VAV3                  0.022   vav 3 guanine nucleotide exchange factor isoform 1 ...
ITSN2                 0.021   intersectin 2 isoform 3 
ITSN2                 0.021   intersectin 2 isoform 1 
FGD3                  0.021   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.021   FYVE, RhoGEF and PH domain containing 3 
FGD6                  0.020   FYVE, RhoGEF and PH domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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