| Name: LOC100287387 | Sequence: fasta or formatted (319aa) | NCBI GI: 239741918 | |
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Description: PREDICTED: hypothetical protein XP_002342351
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.6 37 2 C cysteine 3.4 11 1 D aspartate 1.9 6 1 E glutamate 5.3 17 1 F phenylalanine 2.5 8 1 G glycine 13.5 43 2 H histidine 2.2 7 2 I isoleucine 1.3 4 1 K lysine 1.6 5 1 L leucine 8.8 28 2 M methionine 0.9 3 1 N asparagine 0.3 1 1 P proline 12.9 41 2 Q glutamine 3.4 11 1 R arginine 11.3 36 2 S serine 7.2 23 2 T threonine 3.4 11 1 V valine 5.3 17 2 W tryptophan 2.8 9 1 Y tyrosine 0.3 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342351 LOC100291672 1.000 PREDICTED: hypothetical protein XP_002345662 LOC100290675 0.871 PREDICTED: hypothetical protein XP_002346495 RBM42 0.029 RNA binding motif protein 42 TAF4 0.023 TBP-associated factor 4 FLJ37078 0.020 hypothetical protein LOC222183 NFATC2 0.018 nuclear factor of activated T-cells, cytoplasmic, ca... NFATC2 0.018 nuclear factor of activated T-cells, cytoplasmic, ca... NFATC2 0.018 nuclear factor of activated T-cells, cytoplasmic, c... SEMA3B 0.018 semaphorin 3B isoform 2 precursor SEMA3B 0.018 semaphorin 3B isoform 1 precursor MYO15A 0.018 myosin XV LOC100293975 0.018 PREDICTED: hypothetical protein LMTK3 0.017 lemur tyrosine kinase 3 SOX18 0.017 SRY-box 18 COL3A1 0.017 collagen type III alpha 1 preproprotein JMY 0.017 junction-mediating and regulatory protein COL2A1 0.015 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.015 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100290812 0.015 PREDICTED: hypothetical protein XP_002347678 LOC100288205 0.015 PREDICTED: hypothetical protein XP_002343496 SYNJ1 0.015 synaptojanin 1 isoform d BHLHA9 0.015 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.015 PREDICTED: basic helix-loop-helix family, member a9... WTIP 0.015 Wilms tumor 1 interacting protein LOC100292240 0.014 PREDICTED: hypothetical protein COL16A1 0.014 alpha 1 type XVI collagen precursor COL1A2 0.014 alpha 2 type I collagen MTHFSD 0.012 methenyltetrahydrofolate synthetase domain containi... MTHFSD 0.012 methenyltetrahydrofolate synthetase domain containi...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
