Search of human proteins with 117320550

Search of human proteins with 117320550

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|117320550 hypothetical protein LOC400566 [Homo sapiens]
         (433 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|117320550 hypothetical protein LOC400566 [Homo sapiens]            913   0.0  
gi|89276766 trophinin isoform 5 [Homo sapiens]                         42   8e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    42   0.001
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]     40   0.003
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch...    40   0.004
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       39   0.012
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]    38   0.020
gi|4885377 histone cluster 1, H1d [Homo sapiens]                       37   0.027
gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]             37   0.035
gi|4758816 N-myristoyltransferase 2 [Homo sapiens]                     37   0.035
gi|6005948 WW domain-containing binding protein 4 [Homo sapiens]       37   0.035
gi|55749621 pleckstrin homology domain containing, family G, mem...    37   0.035
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H...    37   0.046
gi|39930511 collagen and calcium binding EGF domains 1 [Homo sap...    37   0.046
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom...    37   0.046
gi|133922582 zinc finger protein 358 [Homo sapiens]                    37   0.046
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             36   0.060
gi|93141049 collagen, type XII, alpha 1 short isoform precursor ...    36   0.078
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [...    36   0.078
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    35   0.10 
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    35   0.10 
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     35   0.10 
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       35   0.10 
gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo...    35   0.10 
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     35   0.10 
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]         35   0.10 
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]             35   0.10 
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo...    35   0.10 
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    35   0.10 
gi|40068059 CBF1 interacting corepressor [Homo sapiens]                35   0.17 

>gi|117320550 hypothetical protein LOC400566 [Homo sapiens]
          Length = 433

 Score =  913 bits (2360), Expect = 0.0
 Identities = 433/433 (100%), Positives = 433/433 (100%)

Query: 1   METRGPGLAVRAESRRLVGIGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREG 60
           METRGPGLAVRAESRRLVGIGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREG
Sbjct: 1   METRGPGLAVRAESRRLVGIGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREG 60

Query: 61  GAAGPRGSRLPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHD 120
           GAAGPRGSRLPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHD
Sbjct: 61  GAAGPRGSRLPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHD 120

Query: 121 ILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLPDFAEIENLANRINESLRWDGILADPE 180
           ILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLPDFAEIENLANRINESLRWDGILADPE
Sbjct: 121 ILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLPDFAEIENLANRINESLRWDGILADPE 180

Query: 181 AEKERIRIYKLNRRKRYRCLALKGFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPE 240
           AEKERIRIYKLNRRKRYRCLALKGFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPE
Sbjct: 181 AEKERIRIYKLNRRKRYRCLALKGFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPE 240

Query: 241 ALKGFHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPE 300
           ALKGFHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPE
Sbjct: 241 ALKGFHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPE 300

Query: 301 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 360
           ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE
Sbjct: 301 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 360

Query: 361 ALKGFHPDPEALKGFHTDPNAEEAPENLPYLSDKDGSSSHRQPTSKAECPNLCFEGNLTP 420
           ALKGFHPDPEALKGFHTDPNAEEAPENLPYLSDKDGSSSHRQPTSKAECPNLCFEGNLTP
Sbjct: 361 ALKGFHPDPEALKGFHTDPNAEEAPENLPYLSDKDGSSSHRQPTSKAECPNLCFEGNLTP 420

Query: 421 KLLHSDLAPTLLE 433
           KLLHSDLAPTLLE
Sbjct: 421 KLLHSDLAPTLLE 433


>gi|89276766 trophinin isoform 5 [Homo sapiens]
          Length = 1431

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 33/112 (29%), Positives = 37/112 (33%), Gaps = 3/112 (2%)

Query: 264  GFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGFHPDPKALK 323
            GF        GF   P A   F     T+ GF        GF  +P    GF   P ++ 
Sbjct: 1308 GFSGGLSTSDGFGSRPNA--SFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIV 1365

Query: 324  GFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGF 375
            GF   P    GF   P    GF   P    GF   P    GF   P    GF
Sbjct: 1366 GFSGGPSTGVGFCSGPST-SGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGF 1416



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 33/119 (27%), Positives = 40/119 (33%), Gaps = 3/119 (2%)

Query: 214  GFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEALKGFHPDPEALK 273
            GF        GF   P A   F      + GF        G   +P    GF   P ++ 
Sbjct: 1308 GFSGGLSTSDGFGSRPNA--SFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIV 1365

Query: 274  GFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGFHPDPKALKGFHTDPEAL 332
            GF   P    GF + P T  GF   P    GF   P    GF   P    GF +   +L
Sbjct: 1366 GFSGGPSTGVGFCSGPST-SGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGAASL 1423



 Score = 30.8 bits (68), Expect = 2.5
 Identities = 41/177 (23%), Positives = 47/177 (26%), Gaps = 2/177 (1%)

Query: 204  GFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEALK 263
            GF        GF        GF        GF        GF   P    G         
Sbjct: 1208 GFGGGLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSA 1267

Query: 264  GFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGFHPDPKALK 323
            GF        GF        GF     T   F        GF        GF   P A  
Sbjct: 1268 GFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNA-- 1325

Query: 324  GFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPN 380
             F      + GF        GF  +P    GF   P ++ GF   P    GF + P+
Sbjct: 1326 SFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTGVGFCSGPS 1382


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 23/117 (19%)

Query: 19   GIGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEERE----------GGAAGPRG- 67
            G GPR PP   G          GGAG  G  + DGE+E+ +          G AAGPRG 
Sbjct: 1274 GPGPRRPPWE-GADAGAAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGP 1332

Query: 68   -----SRLPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFH 119
                 + +P +   A   A R ++   +      S +G D+ +   L+ +    SFH
Sbjct: 1333 GRARAAPVPVVVSSADADAARPLRGLLK------SPRGADEPEDSELERKRKMVSFH 1383


>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
          Length = 1712

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 63/229 (27%), Positives = 84/229 (36%), Gaps = 40/229 (17%)

Query: 207 PDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDP-------------EALK 253
           P P  L  + P+P   KG   DP    G   +P + +G   DP             +  +
Sbjct: 343 PGPPGLPAYSPHPSLAKGARGDP-GFPGAQGEPGS-QGEPGDPGLPGPPGLSIGDGDQRR 400

Query: 254 GIHPDPEALKGFHPDP--EALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKA 311
           G+ P     KGF  DP   AL G  P P+  +G    P  L G    P    GF    K 
Sbjct: 401 GL-PGEMGPKGFIGDPGIPALYGGPPGPDGKRG-PPGPPGLPG----PPGPDGFLFGLKG 454

Query: 312 LKG--------FHPDPKALKGFHTDPEALKGFHPDPKALKGFH--PDPEALKGFHPDPEA 361
            KG          P  +  KG+  D    +    D +A+KG    P P+   G + +P  
Sbjct: 455 AKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGD-EAIKGLPGLPGPKGFAGINGEP-G 512

Query: 362 LKGFHPDP--EALKGFHTDPNAEEAPENLPYLSDKDGSSSHRQPTSKAE 408
            KG   DP    L GF   P  +  P N+     K      R  T+K E
Sbjct: 513 RKGDRGDPGQHGLPGF---PGLKGVPGNIGAPGPKGAKGDSRTITTKGE 558


>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
           family member 2 [Homo sapiens]
          Length = 1122

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 62/246 (25%), Positives = 88/246 (35%), Gaps = 27/246 (10%)

Query: 134 HRQSKVEKKHLPSDSSTVSLPDFAEIENLANRINESLRWDGILADPEAEKERIRIYKLNR 193
           HRQ  +  +HLPS S   SLP   ++      I+  L        P     R     +  
Sbjct: 634 HRQRMIISRHLPSVS---SLPFHPQLHPQQMIISRHL--------PSVCGGRFHPQPMII 682

Query: 194 RKRYRCLALKGFHPD--PEALKGFHPNPEALKG-FHPDPEALKGFHPDPEALKGFHPD-- 248
            +    ++   FHP   P+ +      P    G FHP P  +    P   +L  FHP   
Sbjct: 683 SRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGGRFHPQPMIISRHLPSVSSLP-FHPQLH 741

Query: 249 PEALKGIHPDPEALKG-FHPDPEALKGFHPDPEALKGFHTD---PETLKGFHIDPEALKG 304
           P+ +      P    G FHP P  +    P   +L  FH      + +   H+       
Sbjct: 742 PQQMIISRHLPSVCGGRFHPQPMIISRHLPSVSSLP-FHPQLHPQQMIISRHLPSVCGGR 800

Query: 305 FHPDPKALKGFHPDPKALKGFHTD--PEALKGFHPDPKALKG-FHPDPEALKGFHPDPEA 361
           FHP P  +    P   +L  FH    P+ +      P    G FHP P  +    P   +
Sbjct: 801 FHPQPMIISRHLPSVSSLP-FHPQLHPQQMIISRHLPSVCGGRFHPQPMIISRHLPSVSS 859

Query: 362 LKGFHP 367
           L  FHP
Sbjct: 860 LP-FHP 864


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 9/59 (15%)

Query: 21  GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDG-------EEEEREGGAAGPRGSRLPP 72
           GPR  PG VG  P G +  RG  G  G+  +DG       + E    G++GP+GS+  P
Sbjct: 504 GPRGDPGTVG--PPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDP 560



 Score = 33.1 bits (74), Expect = 0.50
 Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 21   GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
            GPR PPG VG  PSG+    G  G +G     G     E G  GP G   PP
Sbjct: 1173 GPRGPPGPVG--PSGKEGNPGPLGPIGPPGVRG--SVGEAGPEGPPGEPGPP 1220



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 21   GPRAPPGRVG-LQPSGRLDRRGGAGTMGYKDNDGEEEER-EGGAAGPRG 67
            G R  PG  G + P GR  +RG  G  G + + G+  +R + G  G RG
Sbjct: 1098 GQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146


>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
          Length = 1745

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 20   IGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEER----EGGAAGPRGSRLPPITG 75
            +GP  PPG  G  PSG    +G  G  G+K + G++ +     + G  GP G   PP   
Sbjct: 1060 LGPLGPPGAAG--PSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGAD 1117

Query: 76   GA 77
            GA
Sbjct: 1118 GA 1119



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 21   GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
            G   PPG+ G  PSG + R G  G  G K   G   +   G  GP G+R PP
Sbjct: 1304 GAPGPPGKRG--PSGHMGREGREGEKGAKGEPG--PDGPPGRTGPMGARGPP 1351



 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 9/53 (16%)

Query: 21  GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEER--EG--GAAGPRGSR 69
           GP  PPGRV     G++ R G  G  G   + G + +R  +G  G  G +G R
Sbjct: 518 GPHGPPGRV-----GKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQR 565


>gi|4885377 histone cluster 1, H1d [Homo sapiens]
          Length = 221

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 11/130 (8%)

Query: 15  RRLVGIGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPR---GSRLP 71
           + LV  G        G   S +L+++  +G       +G+ + ++ GAA PR   G+   
Sbjct: 86  KSLVSKGTLVQTKGTGASGSFKLNKKAASG-------EGKPKAKKAGAAKPRKPAGAAKK 138

Query: 72  PITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHDILSPCKERGPK 131
           P     +   K+ +KK  +K K   +  G  K  ++S K            SP K + PK
Sbjct: 139 PKKVAGAATPKKSIKKTPKKVKKPATAAGTKK-VAKSAKKVKTPQPKKAAKSPAKAKAPK 197

Query: 132 PEHRQSKVEK 141
           P+  + K  K
Sbjct: 198 PKAAKPKSGK 207


>gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]
          Length = 812

 Score = 37.0 bits (84), Expect = 0.035
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 199 CLALKGFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPD 258
           C  L+G  P    L+G  P    L+G  P    L+G  P    L+G  P    L+G  P 
Sbjct: 705 CALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQ 764

Query: 259 PEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGF 295
               +G         G  P    L+G    P ++  F
Sbjct: 765 AALFQG----TPLQAGTPPQAALLQGLLLRPHSMPTF 797



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 38/153 (24%), Positives = 54/153 (35%), Gaps = 15/153 (9%)

Query: 257 PDPEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEA------LKGFHPDPK 310
           P      G  P     +G  P     +G  T P+      I P+A      L+G  P   
Sbjct: 659 PSAAVHAGTPPQAALFQGTPPQAALFQG--TPPQAALVQGIPPQAAVLCALLQGTPPQAA 716

Query: 311 ALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPEALK------G 364
            L+G  P    L+G       L+G  P    L+G  P    L+G  P     +      G
Sbjct: 717 LLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALFQGTPLQAG 776

Query: 365 FHPDPEALKGFHTDPNAEEA-PENLPYLSDKDG 396
             P    L+G    P++     E LP + D +G
Sbjct: 777 TPPQAALLQGLLLRPHSMPTFSELLPEIGDLEG 809



 Score = 33.1 bits (74), Expect = 0.50
 Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 10/139 (7%)

Query: 207 PDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEAL----KGIHPDPEAL 262
           P      G  P     +G  P     +G  P    ++G  P    L    +G  P    L
Sbjct: 659 PSAAVHAGTPPQAALFQGTPPQAALFQGTPPQAALVQGIPPQAAVLCALLQGTPPQAALL 718

Query: 263 KGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALK------GFH 316
           +G  P    L+G  P    L+G       L+G       L+G  P     +      G  
Sbjct: 719 QGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALFQGTPLQAGTP 778

Query: 317 PDPKALKGFHTDPEALKGF 335
           P    L+G    P ++  F
Sbjct: 779 PQAALLQGLLLRPHSMPTF 797


>gi|4758816 N-myristoyltransferase 2 [Homo sapiens]
          Length = 498

 Score = 37.0 bits (84), Expect = 0.035
 Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 40/178 (22%)

Query: 32  QPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPPITGGASELAKRKVKKKKRK 91
           Q S  LD +   G  G  DN+ E E  +G   G  G++            K+K +K+K++
Sbjct: 11  QQSLELDDQDTCGIDG--DNEEETEHAKGSPGGYLGAK-----------KKKKKQKRKKE 57

Query: 92  KKTKGSGKGDDKHQSQSLKSQPLSSS-------------FHDILSPCKERGP------KP 132
           K   G  K D    SQ +K Q  S +               ++LS C  +GP        
Sbjct: 58  KPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSAC--QGPARNIDEAA 115

Query: 133 EHRQSKVEKKHLPSDSSTVSL-----PDFAEIENLANRINESLRWDGI-LADPEAEKE 184
           +HR    + + +P     ++      PD   +      + +   WD + L+D E  KE
Sbjct: 116 KHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKE 173


>gi|6005948 WW domain-containing binding protein 4 [Homo sapiens]
          Length = 376

 Score = 37.0 bits (84), Expect = 0.035
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 17/116 (14%)

Query: 25  PPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPPITGGASELAKRK 84
           P  +V     G LD    + +  + D+DGE+E  EGG               ++E  K K
Sbjct: 205 PSSKVNENSLGTLDESKSSDS--HSDSDGEQEAEEGGV--------------STETEKPK 248

Query: 85  VKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHDILSPCKERGPKPEHRQSKVE 140
           +K K++ K + G G   +  + +S++ Q    S  +     K+  P  E ++ K E
Sbjct: 249 IKFKEKNKNSDG-GSDPETQKEKSIQKQNSLGSNEEKSKTLKKSNPYGEWQEIKQE 303


>gi|55749621 pleckstrin homology domain containing, family G, member
           3 [Homo sapiens]
          Length = 1163

 Score = 37.0 bits (84), Expect = 0.035
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 24  APPGRVGLQPSGRL-DRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP-ITGGASELA 81
           A  G +G+ P G + D      T   K    EEEE  GGAA    S LPP +   AS +A
Sbjct: 491 AHQGLLGMDPPGDMVDFVAAESTEDLKALSSEEEEEMGGAAQEPESLLPPSVLDQASVIA 550

Query: 82  KRKVKKKKRK-----KKTKGSGKGDDKHQSQSLKSQPLSSS 117
           +R V    R+     + +K SG G  +  S+S     L  S
Sbjct: 551 ERFVSSFSRRSSVAQEDSKSSGFGSPRLVSRSSSVLSLEGS 591


>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
           sapiens]
          Length = 1082

 Score = 36.6 bits (83), Expect = 0.046
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 15/118 (12%)

Query: 41  GGAGTMGYKDNDGEEEEREGGAAGPRGSRLPPITGGASELAKRKVKKK--KRKKKTKGSG 98
           G   +    DN+ ++E+ E G    RGS     +  + E  KRK KKK  +RK +   S 
Sbjct: 710 GSGESSSESDNEDQDEDEEKG----RGSE----SEQSEEDGKRKTKKKVPERKGEASSSD 761

Query: 99  KGDDKHQSQSLKSQPLSSSFHDILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLPDF 156
           +G D   S S +S+  S S  + L P       P   +S    K +    S + L DF
Sbjct: 762 EGSDSSSSSS-ESEMTSESEEEQLEPASWSRKTPPSSKSAPATKEI----SLLDLEDF 814


>gi|39930511 collagen and calcium binding EGF domains 1 [Homo
           sapiens]
          Length = 406

 Score = 36.6 bits (83), Expect = 0.046
 Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 21  GPRAPPGRVGLQPSG---RLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
           GPR   G +G  P     +  RRG  G  G    DG + ER  GA GPRGS  PP
Sbjct: 280 GPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGER--GAPGPRGSPGPP 332


>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
           sapiens]
          Length = 330

 Score = 36.6 bits (83), Expect = 0.046
 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 21  GPRAPPGRVGLQ-PSGRLDRRGGAGTMGYKDNDGEE----EEREGGAAGPRGSRLPPITG 75
           GP+ PPG  G   PSG + R G  G  G   +DG+     EE   G  G RG   P   G
Sbjct: 85  GPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGK--PGPKG 142

Query: 76  GASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQP 113
            A  + +   +  K    T G      K   +  K +P
Sbjct: 143 KAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP 180


>gi|133922582 zinc finger protein 358 [Homo sapiens]
          Length = 568

 Score = 36.6 bits (83), Expect = 0.046
 Identities = 34/116 (29%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 294 GFHIDPEALKGFHPDPKALKGFHPDP--KALKGFHTDPEALKGFHPDPKALKGFHPDPEA 351
           G  + P    G +PDP +  G  PDP  K L G  + P        DPKA     PD   
Sbjct: 449 GLGLSPGTSSGRNPDPGSGPGTLPDPSSKPLPGSRSTPSPTPVESSDPKAGHDAGPDLVP 508

Query: 352 LKGFHPDPEALKGFHPDPEALKGFHTDPNAEEAPENLPYLSDKDGSSSHRQPTSKA 407
                P P       PDP+ +     DPN    P+     S   G+ S   PT ++
Sbjct: 509 SPDLDPVPS------PDPDPVPS--PDPNPVSCPDP---CSPTRGTVSPALPTGES 553



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 12/120 (10%)

Query: 204 GFHPDPEALKGFHPNPEALKGFHPDPEAL--KGFHPDPEALKGFHPDPEALKGIHPDPEA 261
           G  P         P   +L G  PD  ++   G    P    G +PDP +  G  PDP +
Sbjct: 419 GLGPGLSPASMMRPGQVSLLG--PDAVSVLGSGLGLSPGTSSGRNPDPGSGPGTLPDPSS 476

Query: 262 --LKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGFHPDP 319
             L G    P        DP+A  G    P+ +    +DP       PDP  +    P+P
Sbjct: 477 KPLPGSRSTPSPTPVESSDPKA--GHDAGPDLVPSPDLDPVP----SPDPDPVPSPDPNP 530



 Score = 29.6 bits (65), Expect = 5.6
 Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 12/98 (12%)

Query: 254 GIHPDPEALKGFHPDPEALKGFHPDPEA--LKGFHTDPETLKGFHIDPEALKGFHPDPKA 311
           G+   P    G +PDP +  G  PDP +  L G  + P        DP+A     PD   
Sbjct: 449 GLGLSPGTSSGRNPDPGSGPGTLPDPSSKPLPGSRSTPSPTPVESSDPKAGHDAGPDLVP 508

Query: 312 LKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDP 349
                P P        DP+ +    P+P +     PDP
Sbjct: 509 SPDLDPVPS------PDPDPVPSPDPNPVSC----PDP 536


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 41  GGAGTMGYKDNDGEEEEREGGAAGPRGSRLPPITGGASELAKRKVKKKKRKKK-TKGSGK 99
           G +  +  K    ++  R+   +G R  R        S   KRK K K++K+  T+  G+
Sbjct: 194 GSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHR---SRSSKCKRKEKNKEKKRPHTESPGR 250

Query: 100 GDDKHQSQSLKSQPLSSSFHDILSPC------KERGPKPEHRQSKVEKKHLPSDSS 149
              +H S S  S  LSS + D  SP       ++ G K   ++S   +   PS  S
Sbjct: 251 RSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGS 306


>gi|93141049 collagen, type XII, alpha 1 short isoform precursor [Homo
            sapiens]
          Length = 1899

 Score = 35.8 bits (81), Expect = 0.078
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 21   GPRAPPGRVGLQ----PSGRLDRRGGAGTMG---YKDNDGEEEEREGGAAGPRGSRLPPI 73
            GP  PPG  G +    P GR    G  G  G    +   GE+ ER  G++GPRG   PP 
Sbjct: 1781 GPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGTGSSGPRGLPGPPG 1840

Query: 74   TGGAS 78
              G S
Sbjct: 1841 PQGES 1845


>gi|93141047 collagen, type XII, alpha 1 long isoform precursor [Homo
            sapiens]
          Length = 3063

 Score = 35.8 bits (81), Expect = 0.078
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 21   GPRAPPGRVGLQ----PSGRLDRRGGAGTMG---YKDNDGEEEEREGGAAGPRGSRLPPI 73
            GP  PPG  G +    P GR    G  G  G    +   GE+ ER  G++GPRG   PP 
Sbjct: 2945 GPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGTGSSGPRGLPGPPG 3004

Query: 74   TGGAS 78
              G S
Sbjct: 3005 PQGES 3009


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
            sapiens]
          Length = 1487

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 21   GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
            GPR PPG VG  PSG+    G  G +G     G   E   G AGP G+  PP
Sbjct: 1161 GPRGPPGPVG--PSGKDGANGIPGPIGPPGPRGRSGET--GPAGPPGNPGPP 1208



 Score = 33.9 bits (76), Expect = 0.30
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 13/53 (24%)

Query: 20  IGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
           +GPR PPG             G  G  G++ N G  E  E G +GP G R PP
Sbjct: 206 MGPRGPPGPA-----------GAPGPQGFQGNPG--EPGEPGVSGPMGPRGPP 245



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 9/59 (15%)

Query: 21  GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDG-------EEEEREGGAAGPRGSRLPP 72
           G R  PG VG  P G    RG  G  G+   DG         E    G AGP+G+   P
Sbjct: 492 GARGEPGGVG--PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP 548


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
            sapiens]
          Length = 1418

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 21   GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
            GPR PPG VG  PSG+    G  G +G     G   E   G AGP G+  PP
Sbjct: 1092 GPRGPPGPVG--PSGKDGANGIPGPIGPPGPRGRSGET--GPAGPPGNPGPP 1139



 Score = 33.9 bits (76), Expect = 0.30
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 13/53 (24%)

Query: 20  IGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPP 72
           +GPR PPG             G  G  G++ N G  E  E G +GP G R PP
Sbjct: 137 MGPRGPPGPA-----------GAPGPQGFQGNPG--EPGEPGVSGPMGPRGPP 176



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 9/59 (15%)

Query: 21  GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDG-------EEEEREGGAAGPRGSRLPP 72
           G R  PG VG  P G    RG  G  G+   DG         E    G AGP+G+   P
Sbjct: 423 GARGEPGGVG--PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP 479


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 21  GPRAPPGRVGLQ-PSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPPITGGAS 78
           GP  PPG  GL  PSG     G  G  G     G       G AGPRG R PP   GA+
Sbjct: 547 GPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLP-----GPAGPRGERGPPGESGAA 600



 Score = 32.7 bits (73), Expect = 0.66
 Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 21  GPRAPPGRVGLQ-PSGRLDRRGGAGTMGYKDNDGEEEEREG-GAAGPRG-SRLPPITGGA 77
           G R PPG  G   P+G +  RG +G  G   N GE       G AGP G S LP   G A
Sbjct: 589 GERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAA 648



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 20  IGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEE----EEREGGAAGPRGSRLPPITG 75
           +GP  P G  G  P+G   + G  G  G K   GE          GAAGP G   PP   
Sbjct: 717 VGPAGPNGFAG--PAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPA 774

Query: 76  GA 77
           G+
Sbjct: 775 GS 776



 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/77 (31%), Positives = 28/77 (36%), Gaps = 20/77 (25%)

Query: 20  IGPRAPPGRVGLQ----------------PSGRLDRRGGAGTMGYKDNDGEE----EERE 59
           +GPR PPG  G                   +G    RG AG  G    DG         E
Sbjct: 96  MGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGE 155

Query: 60  GGAAGPRGSRLPPITGG 76
            G  GP+G+R  P T G
Sbjct: 156 RGVVGPQGARGFPGTPG 172


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 13/120 (10%)

Query: 21   GPRAPPGRVGLQ----PSGRLDRRGGAGTMGYKDNDGEEEER-------EGGAAGPRGSR 69
            GP+  PG VG      P G     G  G  G K +DGE  +        E G +GP G R
Sbjct: 1333 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1392

Query: 70   LPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHDILSPCKERG 129
             PP  G A    ++  K  K +   +G          Q    +P       I  P  E+G
Sbjct: 1393 GPP--GPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQG 1450



 Score = 34.3 bits (77), Expect = 0.23
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 21   GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEE----EEREGGAAGPRGSRLPP 72
            GP+ P GR GLQ  G +   G AG +G    DG++    E  + G+ G +G + PP
Sbjct: 1126 GPQGPAGRDGLQ--GPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPP 1179



 Score = 32.3 bits (72), Expect = 0.86
 Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 18/80 (22%)

Query: 4    RGPGLAVRAESRRLVGIGPRAPPGRVGLQ----------PSGRLDRRGGAGTMGYKDNDG 53
            RGP  A  A+       GP+ PPG +G             +G     G  G  G K   G
Sbjct: 1257 RGPSGAPGAD-------GPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERG 1309

Query: 54   EE-EEREGGAAGPRGSRLPP 72
            E+ E    GAAGP G + PP
Sbjct: 1310 EKGESGPSGAAGPPGPKGPP 1329



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 9/51 (17%)

Query: 20  IGPRAPPGRVGLQ-PSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSR 69
           +GP+ P G  G   P+G+  RRG AG+ G +   G+         GP+G R
Sbjct: 588 VGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQ--------TGPKGDR 630


>gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo
           sapiens]
          Length = 1980

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 17/145 (11%)

Query: 43  AGTMGYKDNDGEEEEREGGAAGPRGS-RLPPITGGASELAKRKVKKKKRKKKTKGSGKGD 101
           A + G    D  EEE E G   PR S  +  ++  +++  + + KK+K+K+ ++G  KGD
Sbjct: 452 ATSAGTVSEDAIEEEGEEGGGSPRSSSEISKLSSKSAKERRNRRKKRKQKELSEGEEKGD 511

Query: 102 DKHQSQSLKSQPLSSSFHDILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLP--DFAEI 159
            +   +S     +      +          P++R   + +K    + S +S+P   F   
Sbjct: 512 PEKVFKSESEDGMRRKAFRL----------PDNR---IGRKFSIMNQSLLSIPGSPFLSR 558

Query: 160 ENLANRINESLRWDGILADPEAEKE 184
            N  + I  S R  G   DP +E E
Sbjct: 559 HNSKSSI-FSFRGPGRFRDPGSENE 582


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 47  GYKDNDGEEEEREGGAAGPRGSRLPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQS 106
           G ++  GEEEE EG   G   ++ PP    AS   K      K + K+    K  +K ++
Sbjct: 483 GKEEEGGEEEEAEG---GEEETKSPPAEEAASP-EKEAKSPVKEEAKSPAEAKSPEKEEA 538

Query: 107 QSLKSQPLSSSFHDILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLPDFAEIENLANRI 166
           +S           ++ SP K + P  E  +S  E K  P      S  +    E   +  
Sbjct: 539 KSPA---------EVKSPEKAKSPAKEEAKSPPEAKS-PEKEEAKSPAEVKSPEKAKSPA 588

Query: 167 NESLRWDGILADPEAEKERIR 187
            E  +       PE  K  ++
Sbjct: 589 KEEAKSPAEAKSPEKAKSPVK 609


>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
          Length = 1142

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 6/94 (6%)

Query: 21  GPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRG-SRLPPITGGASE 79
           GP  PPG  G+Q  G     GG      KDN G +E   GG  G +G + LP   G    
Sbjct: 421 GPPGPPGPPGIQ--GIHQTLGGYYN---KDNKGNDEHEAGGLKGDKGETGLPGFPGSVGP 475

Query: 80  LAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQP 113
             ++    +   K  KG         SQ +K +P
Sbjct: 476 KGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEP 509



 Score = 32.3 bits (72), Expect = 0.86
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 6   PGLAVRAESRRLVGIGPRAPPGRVGLQPSGRLDRRGGAGTMGYKDNDGEEEEREG--GAA 63
           PGL  + +      +GPR PPG VGL         G  G  G K   G+     G  G  
Sbjct: 521 PGL--KGQQGSAGSMGPRGPPGDVGLP-----GEHGIPGKQGIKGEKGDPGGIIGPPGLP 573

Query: 64  GPRGSRLPP 72
           GP+G   PP
Sbjct: 574 GPKGEAGPP 582



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 20  IGPRAPPGRVGLQ-PSGRLDRRGGAGTMGYKDNDG-EEEEREGGAAGPRG 67
           IGPR PPG  G + P G    RG  G  G K ++G +      GA GP G
Sbjct: 731 IGPRGPPGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTG 780


>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
          Length = 352

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 29/149 (19%), Positives = 63/149 (42%), Gaps = 14/149 (9%)

Query: 56  EEREGGAAGPRGSRLPPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLS 115
           E+  GG +GP+G R     G  + +  RK    + + +++  G+G +K + +S K    +
Sbjct: 106 EKARGGLSGPQGGRA---RGAMAHVGSRK----RSRSRSRSRGRGSEKRKKKSRKDTSRN 158

Query: 116 SSFHDILSPCKERGPKPEHRQSKVEKKHLPSDSSTVSLPDFAEIENLANRINESLRWDGI 175
            S            P  E R  +  ++   S SS+ S    +   + ++  + S      
Sbjct: 159 CSASTSQGRKASTAPGAEERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSS------ 212

Query: 176 LADPEAEKERIRIYKLNRRKRYRCLALKG 204
            +D   ++ + +  +  ++K+ + L  KG
Sbjct: 213 -SDGRKKRGKYKDKRRKKKKKRKKLKKKG 240



 Score = 29.3 bits (64), Expect = 7.3
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)

Query: 82  KRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQP 113
           KR+ KKKKRKK  K   KG +K ++Q +++ P
Sbjct: 225 KRRKKKKKRKKLKK---KGKEKAEAQQVEALP 253


>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
           sapiens]
          Length = 265

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 29/99 (29%), Positives = 30/99 (30%)

Query: 206 HPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEALKGF 265
           H   E   G H   E   G     E  +G H   E   G  P  E L G  P  E   G 
Sbjct: 78  HTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGE 137

Query: 266 HPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKG 304
            P  E   G H   E   G     E   G H   E   G
Sbjct: 138 QPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 176



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 30/109 (27%), Positives = 33/109 (30%)

Query: 206 HPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEALKGF 265
           H   E     H   E   G H + E   G     E  +G H   E   G  P  E L G 
Sbjct: 68  HGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGE 127

Query: 266 HPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKG 314
            P  E   G  P  E   G H   E   G     E   G H   +   G
Sbjct: 128 QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 176



 Score = 34.3 bits (77), Expect = 0.23
 Identities = 27/91 (29%), Positives = 29/91 (31%)

Query: 204 GFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEALK 263
           G H + E   G     E  +G H   E   G  P  E L G  P  E   G  P  E   
Sbjct: 86  GEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPS 145

Query: 264 GFHPDPEALKGFHPDPEALKGFHTDPETLKG 294
           G H   E   G     E   G H   E   G
Sbjct: 146 GEHGSGEQPSGEQASGEQPSGEHASGEQASG 176



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 30/120 (25%), Positives = 38/120 (31%), Gaps = 7/120 (5%)

Query: 286 HTDPETLKGFHIDPEALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGF 345
           H   E     H   E   G H + +   G     +  +G HT  E   G  P  + L G 
Sbjct: 68  HGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGE 127

Query: 346 HPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPNAEEAPENLPYLSDKDGSSSHRQPTS 405
            P  E   G  P  E   G H       G    P+ E+A    P      G  +   P S
Sbjct: 128 QPLSELESGEQPSDEQPSGEH-------GSGEQPSGEQASGEQPSGEHASGEQASGAPIS 180



 Score = 30.0 bits (66), Expect = 4.3
 Identities = 28/109 (25%), Positives = 33/109 (30%)

Query: 246 HPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGF 305
           H   E     H   E   G H + E   G     E  +G HT  E   G     E L G 
Sbjct: 68  HGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGE 127

Query: 306 HPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKG 354
            P  +   G  P  +   G H   E   G     +   G H   E   G
Sbjct: 128 QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 176



 Score = 29.6 bits (65), Expect = 5.6
 Identities = 28/109 (25%), Positives = 33/109 (30%)

Query: 216 HPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEALKGFHPDPEALKGF 275
           H + E     H   E   G H + E   G     E  +G H   E   G  P  E L G 
Sbjct: 68  HGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGE 127

Query: 276 HPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGFHPDPKALKG 324
            P  E   G     E   G H   E   G     +   G H   +   G
Sbjct: 128 QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 176



 Score = 29.6 bits (65), Expect = 5.6
 Identities = 22/72 (30%), Positives = 24/72 (33%)

Query: 203 KGFHPDPEALKGFHPNPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHPDPEAL 262
           +G H   E   G  P+ E L G  P  E   G  P  E   G H   E   G     E  
Sbjct: 105 EGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP 164

Query: 263 KGFHPDPEALKG 274
            G H   E   G
Sbjct: 165 SGEHASGEQASG 176



 Score = 28.9 bits (63), Expect = 9.5
 Identities = 27/109 (24%), Positives = 32/109 (29%)

Query: 256 HPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGF 315
           H   E     H   E   G H + E   G     E  +G H   E   G  P  + L G 
Sbjct: 68  HGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGE 127

Query: 316 HPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPEALKG 364
            P  +   G     E   G H   +   G     E   G H   E   G
Sbjct: 128 QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 176



 Score = 28.9 bits (63), Expect = 9.5
 Identities = 27/109 (24%), Positives = 32/109 (29%)

Query: 266 HPDPEALKGFHPDPEALKGFHTDPETLKGFHIDPEALKGFHPDPKALKGFHPDPKALKGF 325
           H   E     H   E   G H + E   G     E  +G H   +   G  P  + L G 
Sbjct: 68  HGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGE 127

Query: 326 HTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPEALKGFHPDPEALKG 374
               E   G  P  +   G H   E   G     E   G H   E   G
Sbjct: 128 QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 176


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 20/84 (23%), Positives = 38/84 (45%)

Query: 71  PPITGGASELAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFHDILSPCKERGP 130
           PP   G +   K +V++K+  K++  +   +DK QS+   S    S+     +P     P
Sbjct: 494 PPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSP 553

Query: 131 KPEHRQSKVEKKHLPSDSSTVSLP 154
            P   Q +      P+D++ ++ P
Sbjct: 554 TPAPPQKEQPPAETPTDAAVLTSP 577



 Score = 29.6 bits (65), Expect = 5.6
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 63  AGPRGSRLPPITGGASELAKRK-----VKKKKRKKKTKGSGKGDDK-HQSQSLK---SQP 113
           AG RG R  P  GG+    +R+     V+KK++K K + + K      + +SLK   S P
Sbjct: 385 AGERGERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSALARERSLKKRQSLP 444

Query: 114 LSSSFHDILSPCKERGPKPEHRQS 137
            S       S   E  PK + R S
Sbjct: 445 ASPRARLSASTASELSPKSKARPS 468


>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
          Length = 450

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 82  KRKVKKKKRKK-KTKGSGKGDDKHQSQSLK---SQPLSSSFHDILSPCKERGPKPEHRQS 137
           ++K+++KKRKK K  G    D + + +S K    + LSSS H+     KE+    +H  S
Sbjct: 286 EKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHN-REKAKEKPRFLKHESS 344

Query: 138 KVEKKHLPSDSSTVS 152
           + + K   SDS   S
Sbjct: 345 REDSKWSHSDSDKKS 359



 Score = 33.5 bits (75), Expect = 0.39
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 11/143 (7%)

Query: 10  VRAESRRLVGIGPRAPPGRV--GLQPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRG 67
           + A S    G GP   P  +   ++ SG   +R   G     ++  +E     G   P  
Sbjct: 151 INASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEV 210

Query: 68  SRLPPITGGASE--------LAKRKVKKKKRKKKTKGSGKGDDKHQSQSLKSQPLSSSFH 119
             L  +T    +        L K+K KK ++KKK + S     KH+S S  S   SSS  
Sbjct: 211 EFLKSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSS 270

Query: 120 DILSPCKERGPKPEHRQSKVEKK 142
              S       +  +++ K+++K
Sbjct: 271 TETSESSSES-ESNNKEKKIQRK 292


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,196,071
Number of Sequences: 37866
Number of extensions: 1540260
Number of successful extensions: 6084
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 5137
Number of HSP's gapped (non-prelim): 1064
length of query: 433
length of database: 18,247,518
effective HSP length: 105
effective length of query: 328
effective length of database: 14,271,588
effective search space: 4681080864
effective search space used: 4681080864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.