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Search of human proteins with 117168248
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117168248 protein tyrosine phosphatase-like A domain
containing 1 [Homo sapiens]
(362 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117168248 protein tyrosine phosphatase-like A domain containi... 740 0.0
gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo ... 365 e-101
gi|148226324 protein tyrosine phosphatase-like A domain containi... 195 5e-50
gi|38257153 protein tyrosine phosphatase-like (proline instead o... 111 1e-24
gi|82659105 protein tyrosine phosphatase-like, member A [Homo sa... 100 3e-21
gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform ... 48 2e-05
gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform ... 43 4e-04
gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2... 43 4e-04
gi|23308579 prostaglandin-E synthase 3 [Homo sapiens] 39 0.006
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 35 0.080
gi|157694511 nucleolar complex associated 2 homolog [Homo sapiens] 33 0.30
gi|75677376 coiled-coil domain containing 62 isoform b [Homo sap... 32 1.2
gi|30348972 coiled-coil domain containing 62 isoform a [Homo sap... 32 1.2
gi|21735566 mitogen-activated protein kinase kinase kinase 7 iso... 31 1.5
gi|21735564 mitogen-activated protein kinase kinase kinase 7 iso... 31 1.5
gi|21735562 mitogen-activated protein kinase kinase kinase 7 iso... 31 1.5
gi|4507361 mitogen-activated protein kinase kinase kinase 7 isof... 31 1.5
gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform ... 31 1.5
gi|12232393 major facilitator superfamily domain containing 1 [H... 31 2.0
gi|6912736 transient receptor potential cation channel, subfamil... 30 2.6
gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla... 29 5.7
gi|106049528 pyruvate carboxylase precursor [Homo sapiens] 29 5.7
gi|106049295 pyruvate carboxylase precursor [Homo sapiens] 29 5.7
gi|106049292 pyruvate carboxylase precursor [Homo sapiens] 29 5.7
gi|16975496 cortactin binding protein 2 [Homo sapiens] 29 5.7
gi|58332438 steroid 5 alpha-reductase 2-like 2 [Homo sapiens] 29 7.5
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 29 7.5
gi|21359965 CLPTM1-like [Homo sapiens] 28 9.8
gi|57863271 hypothetical protein LOC23078 isoform a [Homo sapiens] 28 9.8
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 28 9.8
>gi|117168248 protein tyrosine phosphatase-like A domain containing
1 [Homo sapiens]
Length = 362
Score = 740 bits (1910), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 61 FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL
Sbjct: 61 FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESF 180
RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESF
Sbjct: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESF 180
Query: 181 YDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQN 240
YDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQN
Sbjct: 181 YDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQN 240
Query: 241 KAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQS 300
KAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQS
Sbjct: 241 KAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQS 300
Query: 301 IPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK 360
IPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK
Sbjct: 301 IPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK 360
Query: 361 IH 362
IH
Sbjct: 361 IH 362
>gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo
sapiens]
Length = 190
Score = 365 bits (936), Expect = e-101
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 61 FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL
Sbjct: 61 FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK 177
RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK
Sbjct: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK 177
>gi|148226324 protein tyrosine phosphatase-like A domain containing
2 [Homo sapiens]
Length = 232
Score = 195 bits (496), Expect = 5e-50
Identities = 92/219 (42%), Positives = 144/219 (65%), Gaps = 5/219 (2%)
Query: 146 RKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINA 205
+ YLF+Y L+QF G SWIF N+TVRF GK+S DTF+ + +M CQ ++++E ++
Sbjct: 16 KNAYLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMRLCQSVSLLELLHI 75
Query: 206 AIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLT 265
+G+ ++ +LP +QL R ILF++ + EE+Q K VV +F W+ +++ RY++ ML+
Sbjct: 76 YVGIESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNLLDMVRYTYSMLS 135
Query: 266 CIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFS 325
I + + VLTWL TLW+P+YPL LAEA ++ QS+P F G +S LP+ + + F
Sbjct: 136 VIGISYAVLTWLSQTLWMPIYPLCVLAEAFAIYQSLPYFESFGTYSTKLPF--DLSIYFP 193
Query: 326 FFLQIYLIMIFLGLYINFRHLYKQRRRRYG---QKKKKI 361
+ L+IYL+M+F+G+Y + HLY +RR G KKKK+
Sbjct: 194 YVLKIYLMMLFIGMYFTYSHLYSERRDILGIFPIKKKKM 232
>gi|38257153 protein tyrosine phosphatase-like (proline instead of
catalytic arginine), member b [Homo sapiens]
Length = 254
Score = 111 bits (277), Expect = 1e-24
Identities = 63/212 (29%), Positives = 115/212 (54%), Gaps = 10/212 (4%)
Query: 145 LRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETIN 204
L YL +YN+V G W+ + + + L K S++ ++++ + F Q A++E ++
Sbjct: 37 LATAYLVIYNVVMTAG--WLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILH 94
Query: 205 AAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYML 264
AIG+ S V+ + Q++ R F+++ + +++E+Q++ V W+ EI RYSFY
Sbjct: 95 CAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF 154
Query: 265 TCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRF 324
+ ++ ++ W RYTL+I LYP+G E +++ ++P + G +S +LP K F
Sbjct: 155 SLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPN----KYNF 210
Query: 325 SFFLQIYLIMIFLGLYINFRHLY----KQRRR 352
SF +LI+I + F LY QRR+
Sbjct: 211 SFDYYAFLILIMISYIPIFPQLYFHMIHQRRK 242
>gi|82659105 protein tyrosine phosphatase-like, member A [Homo
sapiens]
Length = 288
Score = 99.8 bits (247), Expect = 3e-21
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 8/222 (3%)
Query: 134 ESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYF 193
E+ G L L +L Y++ G W+ + + + + K + + ++ + F
Sbjct: 60 EAPGERRRLGVLATAWLTFYDIAMTAG--WLVLAIAMVRFYMEKGTHRGLYKSIQKTLKF 117
Query: 194 CQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSA 253
Q A++E ++ IG+ + V+ + +Q+ R F++++I +++ +QN+ V W+
Sbjct: 118 FQTFALLEIVHCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTV 177
Query: 254 IEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFT 313
EI RYSFY + +D + W RY +I LYP+G E +++ ++P +TG FS
Sbjct: 178 TEITRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIR 237
Query: 314 LPYPVKIKVRFSFFLQIYL---IMIFLGLYINFRHLYKQRRR 352
LP + + +FL I + I +F LY H+ +QRR+
Sbjct: 238 LPNKYNVSFDYYYFLLITMASYIPLFPQLYF---HMLRQRRK 276
>gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform 1
[Homo sapiens]
Length = 586
Score = 47.8 bits (112), Expect = 2e-05
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 12 WAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPVY 71
W R R +++ + D + + I ++ + F + A G +Y +EF V +
Sbjct: 53 WYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKN--ADGVELYN-EIEFYAKVNSKDSQ 109
Query: 72 -KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERL 128
K + R + V+K K W RLTK++ +P++L+ DFD W D E D EMEL E
Sbjct: 110 DKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAE 169
Query: 129 NKLRLESEGSPETLTNL 145
++ ++ P + +L
Sbjct: 170 LLKKVSTKRPPPAMDDL 186
>gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform 4
[Homo sapiens]
Length = 161
Score = 43.1 bits (100), Expect = 4e-04
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 72 KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129
K + R + V+K K W RLTK++ +P++L+ DFD W D E D EMEL E
Sbjct: 73 KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 132
Query: 130 KLRLESEGSPETLTNL 145
++ ++ P + +L
Sbjct: 133 LKKVSTKRPPPAMDDL 148
>gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2
[Homo sapiens]
Length = 525
Score = 43.1 bits (100), Expect = 4e-04
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 72 KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129
K + R + V+K K W RLTK++ +P++L+ DFD W D E D EMEL E
Sbjct: 50 KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 109
Query: 130 KLRLESEGSPETLTNL 145
++ ++ P + +L
Sbjct: 110 LKKVSTKRPPPAMDDL 125
>gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]
Length = 160
Score = 39.3 bits (90), Expect = 0.006
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 12 WAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDL---VKP- 67
W R +++ + D ++ ++ ++ L F G G + ++ HL +DL + P
Sbjct: 8 WYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLG----GSDNFK-HLNEIDLFHCIDPN 62
Query: 68 EPVYKLTQRQVNITVQKKVS-QWWERLTKQEKRPLFLAPDFDRWL---DESDAEMELRAK 123
+ +K T R + ++K S Q W RLTK+ + +L+ DF+ W D+SD +M +
Sbjct: 63 DSKHKRTDRSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 124 EEERLNKL 131
E +N +
Sbjct: 123 FSEMMNNM 130
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
sapiens]
Length = 2346
Score = 35.4 bits (80), Expect = 0.080
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 21 LRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPVYKLTQRQVNI 80
LR L +V ++ + A G A GD+ + EF D ++ E + Q+ V +
Sbjct: 913 LRSRLEEVLGRSLERLNRLETLAAIGGAAAGDDTEDTSTEFTDSIEEEAAHHSHQQLVKV 972
Query: 81 TVQKKVSQWWERLTKQEKRPLFLAP-----DFDRWLDES--------DAEMELRAKEEER 127
++K ++ T + + P F P D +R L E +E + K EE
Sbjct: 973 ALEKSLA------TVETQNPSFSPPSPMGGDSNRCLQEEMLHLRAEFHQHLEEKRKAEEE 1026
Query: 128 LNKLRLESE 136
L +L+ + E
Sbjct: 1027 LKELKAQIE 1035
>gi|157694511 nucleolar complex associated 2 homolog [Homo sapiens]
Length = 749
Score = 33.5 bits (75), Expect = 0.30
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 60 EFLDLVKPEPVYKLTQRQ-VNITV-QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAE 117
+ L V+ Y ++RQ V+ V +++ + WE+LT++E PL L + W D E
Sbjct: 572 QLLGKVQENSAYICSRRQRVSFGVSEQQAVEAWEKLTREEGTPLTLY--YSHWRKLRDRE 629
Query: 118 MELRAKEEERLNKL 131
++L +ERL L
Sbjct: 630 IQLEISGKERLEDL 643
>gi|75677376 coiled-coil domain containing 62 isoform b [Homo
sapiens]
Length = 684
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 64 LVKPEPVYKLTQRQVNITVQKKVSQWWERLTK---QEKRPLFLAPDFDRWLDESDAEMEL 120
+VK + YK + + I V K E+ T+ Q + + L + DE +E
Sbjct: 201 IVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVER 260
Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFS 162
+++E LN + + E + L NLR+ Y+ + +QFL F+
Sbjct: 261 EKRKDELLNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFN 302
>gi|30348972 coiled-coil domain containing 62 isoform a [Homo
sapiens]
Length = 682
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 64 LVKPEPVYKLTQRQVNITVQKKVSQWWERLTK---QEKRPLFLAPDFDRWLDESDAEMEL 120
+VK + YK + + I V K E+ T+ Q + + L + DE +E
Sbjct: 201 IVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVER 260
Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFS 162
+++E LN + + E + L NLR+ Y+ + +QFL F+
Sbjct: 261 EKRKDELLNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFN 302
>gi|21735566 mitogen-activated protein kinase kinase kinase 7
isoform D [Homo sapiens]
Length = 491
Score = 31.2 bits (69), Expect = 1.5
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 184 FHTVADMMYFC----QMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 239
++T A M +C Q +A + ++ + P+L+ + G + FGT ++Q
Sbjct: 124 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 183
Query: 240 NKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLG 289
W A E+F S Y C W ++ W T P +G
Sbjct: 184 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 233
>gi|21735564 mitogen-activated protein kinase kinase kinase 7
isoform C [Homo sapiens]
Length = 518
Score = 31.2 bits (69), Expect = 1.5
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 184 FHTVADMMYFC----QMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 239
++T A M +C Q +A + ++ + P+L+ + G + FGT ++Q
Sbjct: 124 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 183
Query: 240 NKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLG 289
W A E+F S Y C W ++ W T P +G
Sbjct: 184 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 233
>gi|21735562 mitogen-activated protein kinase kinase kinase 7
isoform B [Homo sapiens]
Length = 606
Score = 31.2 bits (69), Expect = 1.5
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 184 FHTVADMMYFC----QMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 239
++T A M +C Q +A + ++ + P+L+ + G + FGT ++Q
Sbjct: 124 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 183
Query: 240 NKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLG 289
W A E+F S Y C W ++ W T P +G
Sbjct: 184 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 233
>gi|4507361 mitogen-activated protein kinase kinase kinase 7 isoform
A [Homo sapiens]
Length = 579
Score = 31.2 bits (69), Expect = 1.5
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 184 FHTVADMMYFC----QMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 239
++T A M +C Q +A + ++ + P+L+ + G + FGT ++Q
Sbjct: 124 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 183
Query: 240 NKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLG 289
W A E+F S Y C W ++ W T P +G
Sbjct: 184 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 233
>gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform 3
[Homo sapiens]
Length = 166
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 91 ERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLNKLRLESEGSPETLTNL 145
E K +P++L+ DFD W D E D EMEL E ++ ++ P + +L
Sbjct: 98 EFYAKVNSKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDL 153
>gi|12232393 major facilitator superfamily domain containing 1 [Homo
sapiens]
Length = 465
Score = 30.8 bits (68), Expect = 2.0
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 172 FCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFII 231
F LGK F + F + Q + + ++ I SPV L+ G+N I +
Sbjct: 283 FIGLGKVFFTEKFG------FSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLC 336
Query: 232 FGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCL 291
+ + + F ++ W A+ + S+ +L C W +P + LG
Sbjct: 337 AVAATLVSHMMLAFTMWNPWIAMCLLGLSYSLLAC-------ALWPMVAFVVPEHQLGTA 389
Query: 292 AEAVSVIQSI 301
+ IQ++
Sbjct: 390 YGFMQSIQNL 399
>gi|6912736 transient receptor potential cation channel, subfamily
C, member 5 [Homo sapiens]
Length = 973
Score = 30.4 bits (67), Expect = 2.6
Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 185 HTVADMMY-FCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAV 243
HT + + + F +LA + + V P P++++ + ++L I+G ++EM +
Sbjct: 370 HTASYLTFLFMLLLASQHIVRTDLHVQGPP--PTVVEWMILPWVLGFIWGEIKEMWDGGF 427
Query: 244 VFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYT---------LWIPLYPLGCLAEA 294
++ W+ ++ S Y+ T + K++ +++Y +W P +AEA
Sbjct: 428 TEYIHDWWNLMDFAMNSLYLAT---ISLKIVAYVKYNGSRPREEWEMWHPT----LIAEA 480
Query: 295 VSVIQSI 301
+ I +I
Sbjct: 481 LFAISNI 487
>gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class
U [Homo sapiens]
Length = 435
Score = 29.3 bits (64), Expect = 5.7
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 202 TINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSF 261
TI AI + P+ IQ+ + IF + + + A+ F +W+ + F +
Sbjct: 301 TIPLAIKLKEHPIFFMFIQIA-----VIAIFKSYPTVGDVALYMAFFPVWNHLYRFLRNI 355
Query: 262 YMLTCIDMDWKVLTWLRYTLWI 283
++LTCI + +L + + LWI
Sbjct: 356 FVLTCIIIVCSLLFPVLWHLWI 377
>gi|106049528 pyruvate carboxylase precursor [Homo sapiens]
Length = 1178
Score = 29.3 bits (64), Expect = 5.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 167 NLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPV 214
N+ +FC + KE+ D F + Y ML +E +A GV + +
Sbjct: 657 NVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAI 704
>gi|106049295 pyruvate carboxylase precursor [Homo sapiens]
Length = 1178
Score = 29.3 bits (64), Expect = 5.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 167 NLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPV 214
N+ +FC + KE+ D F + Y ML +E +A GV + +
Sbjct: 657 NVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAI 704
>gi|106049292 pyruvate carboxylase precursor [Homo sapiens]
Length = 1178
Score = 29.3 bits (64), Expect = 5.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 167 NLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVTTSPV 214
N+ +FC + KE+ D F + Y ML +E +A GV + +
Sbjct: 657 NVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAI 704
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 29.3 bits (64), Expect = 5.7
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 83 QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEME-LRAK---EEERLNKLRLESEGS 138
+KK ++ E L+ +++R + ++ L E D E E LRAK EE L+ E +
Sbjct: 203 KKKTNELEEELSAEKRRSTEMEAQMEKQLSEFDTEREQLRAKLNREEAHTTDLKEEIDKM 262
Query: 139 PETLTNLRKG 148
+ + L++G
Sbjct: 263 RKMIEQLKRG 272
>gi|58332438 steroid 5 alpha-reductase 2-like 2 [Homo sapiens]
Length = 363
Score = 28.9 bits (63), Expect = 7.5
Identities = 9/45 (20%), Positives = 26/45 (57%)
Query: 257 FRYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSI 301
F + F++++C + +++ +W+ +T+ P+G +S+ S+
Sbjct: 291 FTWMFFLVSCPNYTYEIGSWISFTVMTQTLPVGIFTLLMSIQMSL 335
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 28.9 bits (63), Expect = 7.5
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query: 74 TQRQVNITVQKKVSQWWERLTKQEKRPLFLAPD----------FDRWLDESDAEMELRAK 123
T RQV I ++ Q+ E L+K EK + L D D LD++ E+E +
Sbjct: 984 TARQVKI----EMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTN 1039
Query: 124 EEERLNKLRLESE 136
+ L KL+ +E
Sbjct: 1040 AVKELEKLQHSTE 1052
>gi|21359965 CLPTM1-like [Homo sapiens]
Length = 538
Score = 28.5 bits (62), Expect = 9.8
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 33/145 (22%)
Query: 152 MYNLVQFLGFS--------WIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETI 203
+Y+L QF GFS IFV+ + F L F FH + D + F ++ +
Sbjct: 259 VYSLQQF-GFSEKDADEVKGIFVDTNLYFLAL--TFFVAAFHLLFDFLAFKNDISFWKKK 315
Query: 204 NAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYM 263
+ IG++T V L R F +IF + + Q +V + +AIE+
Sbjct: 316 KSMIGMSTKAV-------LWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIEL------- 361
Query: 264 LTCIDMDWKVLTWLRYTL-WIPLYP 287
WKV L+ T+ W L P
Sbjct: 362 -------WKVKKALKMTIFWRGLMP 379
>gi|57863271 hypothetical protein LOC23078 isoform a [Homo sapiens]
Length = 1905
Score = 28.5 bits (62), Expect = 9.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 280 TLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPV 318
TL +P +PL LA AV ++ S P+ + PY +
Sbjct: 307 TLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSI 345
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 28.5 bits (62), Expect = 9.8
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESE 136
Q N +Q K+ E+L +E L DR +ES E EL A ER+ LR + +
Sbjct: 780 QTNNHLQTKLDHIQEQLESKELERQNLETFKDRMTEESKVEAELHA---ERIEALRKQFQ 836
Query: 137 GSPET 141
ET
Sbjct: 837 TERET 841
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.142 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,991,789
Number of Sequences: 37866
Number of extensions: 549089
Number of successful extensions: 2147
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2123
Number of HSP's gapped (non-prelim): 35
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.