Guide to the Human Genome
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Name: PTPLAD2 Sequence: fasta or formatted (232aa) NCBI GI: 148226324
Description:

protein tyrosine phosphatase-like A domain containing 2

Referenced in:

Fatty Acid Synthesis
Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          8           1
 C cysteine            1.7          4           1
 D aspartate           2.2          5           1
 E glutamate           3.9          9           2
 F phenylalanine       8.2         19           2
 G glycine             3.9          9           1
 H histidine           1.7          4           1
 I isoleucine          8.6         20           3
 K lysine              3.9          9           4
 L leucine            14.2         33           2
 M methionine          4.7         11           2
 N asparagine          1.7          4           1
 P proline             4.3         10           1
 Q glutamine           3.4          8           1
 R arginine            3.9          9           2
 S serine              7.3         17           1
 T threonine           4.7         11           1
 V valine              7.3         17           2
 W tryptophan          2.2          5           1
 Y tyrosine            8.6         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase-like A domain containi... 
PTPLAD1               0.379   protein tyrosine phosphatase-like A domain containi...
PTPLB                 0.165   protein tyrosine phosphatase-like (proline instead o...
PTPLA                 0.129   protein tyrosine phosphatase-like, member A 
LOC100291405          0.047   PREDICTED: hypothetical protein XP_002347581 
XKR4                  0.018   XK, Kell blood group complex subunit-related family,...
PAQR3                 0.011   progestin and adipoQ receptor family member III [Hom...
AGTR1                 0.007   angiotensin II receptor, type 1 
AGTR1                 0.007   angiotensin II receptor, type 1 
AGTR1                 0.007   angiotensin II receptor, type 1 
AGTR1                 0.007   angiotensin II receptor, type 1 
AGTR1                 0.007   angiotensin II receptor, type 1 
SCN2A                 0.007   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.007   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.007   sodium channel, voltage-gated, type II, alpha isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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