TRPC5 34998

Name: TRPC5	Sequence: fasta or formatted (973aa)		NCBI GI: 6912736
Description: transient receptor potential cation channel, subfamily C, member 5		Referenced in: Calcium and TRP Cation Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 60 2 C cysteine 2.2 21 1 D aspartate 3.9 38 2 E glutamate 7.2 70 2 F phenylalanine 4.7 46 1 G glycine 4.7 46 2 H histidine 2.6 25 1 I isoleucine 6.0 58 2 K lysine 5.8 56 3 L leucine 12.1 118 3 M methionine 2.9 28 2 N asparagine 5.1 50 2 P proline 4.1 40 3 Q glutamine 3.9 38 2 R arginine 5.1 50 5 S serine 8.9 87 3 T threonine 4.2 41 2 V valine 4.7 46 2 W tryptophan 2.0 19 2 Y tyrosine 3.7 36 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transient receptor potential cation channel, subfamil... TRPC4 0.631 transient receptor potential cation channel, subfamil... TRPC4 0.629 transient receptor potential cation channel, subfam... TRPC4 0.624 transient receptor potential cation channel, subfam... TRPC4 0.601 transient receptor potential cation channel, subfam... TRPC4 0.535 transient receptor potential cation channel, subfam... TRPC4 0.390 transient receptor potential cation channel, subfam... TRPC1 0.309 transient receptor potential cation channel, subfamil... TRPC3 0.269 transient receptor potential cation channel, subfam... TRPC3 0.269 transient receptor potential cation channel, subfamil... TRPC7 0.263 transient receptor potential cation channel, subfamil... TRPC6 0.255 transient receptor potential cation channel, subfamil... LOC649660 0.088 PREDICTED: similar to transient receptor potential ... TRPM8 0.040 transient receptor potential cation channel, subfam... TRPM2 0.034 transient receptor potential cation channel, subfamil... TRPM1 0.031 transient receptor potential cation channel, subfami... LOC100292661 0.028 PREDICTED: similar to transient receptor potential ... LOC100288724 0.028 PREDICTED: similar to transient receptor potential ... LOC100288724 0.028 PREDICTED: hypothetical protein XP_002342847, parti... LOC100288724 0.028 PREDICTED: similar to transient receptor potential ... TRPM7 0.026 transient receptor potential cation channel, subfam... TRPM6 0.025 transient receptor potential cation channel, subfami... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM3 0.024 transient receptor potential cation channel, subfam... TRPM5 0.023 transient receptor potential cation channel, subfami... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.