Guide to the Human Genome
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Name: PC Sequence: fasta or formatted (1178aa) NCBI GI: 106049292
Description:

pyruvate carboxylase precursor

Referenced in:

Glycolysis
TCA Cycle

Other entries for this name:
alt mRNA [1178aa] pyruvate carboxylase precursor
alt mRNA [1178aa] pyruvate carboxylase precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8        116           2
 C cysteine            1.1         13           1
 D aspartate           5.2         61           2
 E glutamate           6.7         79           2
 F phenylalanine       4.4         52           2
 G glycine             8.0         94           4
 H histidine           3.2         38           1
 I isoleucine          4.8         56           2
 K lysine              4.8         56           2
 L leucine             8.9        105           3
 M methionine          3.0         35           1
 N asparagine          3.2         38           2
 P proline             5.7         67           3
 Q glutamine           3.9         46           2
 R arginine            6.1         72           2
 S serine              4.7         55           2
 T threonine           5.0         59           2
 V valine              8.5        100           2
 W tryptophan          0.3          3           1
 Y tyrosine            2.8         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyruvate carboxylase precursor 
PC                    1.000   pyruvate carboxylase precursor 
PC                    1.000   pyruvate carboxylase precursor 
PCCA                  0.151   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
PCCA                  0.151   propionyl-Coenzyme A carboxylase, alpha polypeptide...
MCCC1                 0.151   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
ACACA                 0.085   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.085   acetyl-Coenzyme A carboxylase alpha isoform 4 
ACACA                 0.085   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.085   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.085   acetyl-Coenzyme A carboxylase alpha isoform 1 
ACACB                 0.082   acetyl-Coenzyme A carboxylase beta 
CAD                   0.023   carbamoylphosphate synthetase 2/aspartate transcarba...
CPS1                  0.015   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.015   carbamoyl-phosphate synthetase 1 isoform b precursor...
CPS1                  0.013   carbamoyl-phosphate synthetase 1 isoform c 
HMGCLL1               0.009   3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-l...
HMGCLL1               0.009   3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-l...
HMGCL                 0.006   3-hydroxy-3-methylglutaryl CoA lyase 
NFRKB                 0.005   nuclear factor related to kappaB binding protein is...
NFRKB                 0.005   nuclear factor related to kappaB binding protein iso...
PCDH15                0.003   protocadherin 15 isoform CD1-4 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-10 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-9 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-8 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-7 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-6 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-2 precursor 
PCDH15                0.003   protocadherin 15 isoform CD1-1 precursor 
B4GALT2               0.003   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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