Guide to the Human Genome
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Name: KIAA0564 Sequence: fasta or formatted (1905aa) NCBI GI: 57863271
Description:

hypothetical protein LOC23078 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {1039aa} hypothetical protein LOC23078 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8        110           3
 C cysteine            0.9         18           1
 D aspartate           5.5        104           2
 E glutamate           6.8        129           2
 F phenylalanine       3.3         63           3
 G glycine             6.4        121           2
 H histidine           2.7         52           2
 I isoleucine          6.0        114           2
 K lysine              5.9        112           3
 L leucine            11.2        214           4
 M methionine          2.6         49           2
 N asparagine          3.9         74           2
 P proline             5.4        103           2
 Q glutamine           4.9         93           2
 R arginine            6.1        117           2
 S serine              6.7        128           2
 T threonine           5.4        103           2
 V valine              6.7        127           3
 W tryptophan          1.0         19           2
 Y tyrosine            2.9         55           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23078 isoform a 
KIAA0564              0.536   hypothetical protein LOC23078 isoform b 
MDN1                  0.012   MDN1, midasin homolog 
DYNC1H1               0.003   cytoplasmic dynein 1 heavy chain 1 
RBM20                 0.003   RNA binding motif protein 20 
ATAD1                 0.002   ATPase family, AAA domain containing 1 
DHX36                 0.002   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX36                 0.002   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
TLN2                  0.002   talin 2 
ANKS1A                0.002   ankyrin repeat and sterile alpha motif domain conta...
PLEC1                 0.002   plectin 1 isoform 11 
PLEC1                 0.002   plectin 1 isoform 10 
PLEC1                 0.002   plectin 1 isoform 8 
PLEC1                 0.002   plectin 1 isoform 7 
PLEC1                 0.002   plectin 1 isoform 6 
PLEC1                 0.002   plectin 1 isoform 3 
PLEC1                 0.002   plectin 1 isoform 2 
PLEC1                 0.002   plectin 1 isoform 1 
CCDC61                0.002   coiled-coil domain containing 61 
TBCD                  0.002   beta-tubulin cofactor D 
KIAA1614              0.002   hypothetical protein LOC57710 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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