Guide to the Human Genome
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Search of human proteins with 239746826

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
         (214 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          439   e-123
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          439   e-123
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          260   5e-70
gi|4504425 high-mobility group box 1 [Homo sapiens]                   196   1e-50
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           191   4e-49
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          179   1e-45
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          179   1e-45
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          179   1e-45
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            177   5e-45
gi|194688135 high-mobility group box 2 [Homo sapiens]                 154   4e-38
gi|194688133 high-mobility group box 2 [Homo sapiens]                 154   4e-38
gi|11321591 high-mobility group box 2 [Homo sapiens]                  154   4e-38
gi|71143137 high-mobility group box 3 [Homo sapiens]                  129   2e-30
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   128   4e-30
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   128   4e-30
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   123   1e-28
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   123   1e-28
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   123   1e-28
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   120   7e-28
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   119   1e-27
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   119   1e-27
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   119   1e-27
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          111   4e-25
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          111   4e-25
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   111   4e-25
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     74   1e-13
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                         72   4e-13
gi|57232748 HMG2 like isoform 2 [Homo sapiens]                         62   3e-10
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...    58   7e-09
gi|226246533 TOX high mobility group box family member 3 isoform...    57   1e-08

>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  439 bits (1128), Expect = e-123
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   MQSLCKLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFED 60
           MQSLCKLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFED
Sbjct: 1   MQSLCKLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFED 60

Query: 61  PNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLK 120
           PNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLK
Sbjct: 61  PNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLK 120

Query: 121 EKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDH 180
           EKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDH
Sbjct: 121 EKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDH 180

Query: 181 DFLKIPKNKDAELRIWSYNRGPSSGLLDICAYPK 214
           DFLKIPKNKDAELRIWSYNRGPSSGLLDICAYPK
Sbjct: 181 DFLKIPKNKDAELRIWSYNRGPSSGLLDICAYPK 214


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  439 bits (1128), Expect = e-123
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   MQSLCKLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFED 60
           MQSLCKLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFED
Sbjct: 1   MQSLCKLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFED 60

Query: 61  PNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLK 120
           PNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLK
Sbjct: 61  PNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLK 120

Query: 121 EKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDH 180
           EKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDH
Sbjct: 121 EKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDH 180

Query: 181 DFLKIPKNKDAELRIWSYNRGPSSGLLDICAYPK 214
           DFLKIPKNKDAELRIWSYNRGPSSGLLDICAYPK
Sbjct: 181 DFLKIPKNKDAELRIWSYNRGPSSGLLDICAYPK 214


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  260 bits (665), Expect = 5e-70
 Identities = 133/154 (86%), Positives = 135/154 (87%), Gaps = 19/154 (12%)

Query: 13  RSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFF 72
           +SSTQMLQSTSQSFLRSAQR                   AETKMKFEDPNAPKSPPLAFF
Sbjct: 59  KSSTQMLQSTSQSFLRSAQR-------------------AETKMKFEDPNAPKSPPLAFF 99

Query: 73  MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG 132
           MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG
Sbjct: 100 MFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGG 159

Query: 133 KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKI 166
           KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKK+
Sbjct: 160 KGKPDAAKKGAIKAEKCKKKKEEDKMRNMKIKKM 193


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  196 bits (498), Expect = 1e-50
 Identities = 97/125 (77%), Positives = 103/125 (82%), Gaps = 1/125 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D A YEREMK YIPPK ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 65  KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 124

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMWN  A DDK PYEKKA KLKEKYEKDIAA+  KGKPDAAKKG +KAEK KKK
Sbjct: 125 VAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 184

Query: 153 KEEDK 157
           KEE++
Sbjct: 185 KEEEE 189



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 115
           DP  P  K    AFF+ +  +  K K+HP  S+  S+ +KK  E W  ++  +K  +E  
Sbjct: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 63

Query: 116 AVKLKEKYEKDIAAF 130
           A   K +YE+++  +
Sbjct: 64  AKADKARYEREMKTY 78


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  191 bits (485), Expect = 4e-49
 Identities = 94/125 (75%), Positives = 102/125 (81%), Gaps = 1/125 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D  HYER+MK YIPPK ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMWN  A DDK P EKKA KLKEKYEKDIAA+  KGKP+AAKKG +KAEK KKK
Sbjct: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184

Query: 153 KEEDK 157
           KEE++
Sbjct: 185 KEEEE 189



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 115
           DP  P  K    AFF+ +  +  K K+H   S+  S+ + K  E W  ++  +K  +E  
Sbjct: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDM 63

Query: 116 AVKLKEKYEKDIAAF 130
           A   K  YE+ +  +
Sbjct: 64  AKADKTHYERQMKTY 78


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  179 bits (455), Expect = 1e-45
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 1/125 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D AHY+REMK YIPPK ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  D
Sbjct: 201 KADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGD 260

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKK
Sbjct: 261 VAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKK 320

Query: 153 KEEDK 157
           KEE++
Sbjct: 321 KEEEE 325


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  179 bits (455), Expect = 1e-45
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 1/125 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D AHY+REMK YIPPK ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  D
Sbjct: 201 KADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGD 260

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKK
Sbjct: 261 VAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKK 320

Query: 153 KEEDK 157
           KEE++
Sbjct: 321 KEEEE 325


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  179 bits (455), Expect = 1e-45
 Identities = 88/125 (70%), Positives = 98/125 (78%), Gaps = 1/125 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D AHY+REMK YIPPK ETK KF+DPNAPK PP AFF++ SE  PKIK E PGLS  D
Sbjct: 201 KADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGD 260

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMWN  A DDK PYEK++ KLKEKYEKDIAA+  KGK DAA  G +KA K KKK
Sbjct: 261 VAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKK 320

Query: 153 KEEDK 157
           KEE++
Sbjct: 321 KEEEE 325


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  177 bits (450), Expect = 5e-45
 Identities = 89/125 (71%), Positives = 98/125 (78%), Gaps = 1/125 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D AHYEREMK YIPPK E K KF+DPNAPK PPLAFF+F SE  PKIK EHPGLSI D
Sbjct: 739 KADKAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDD 798

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           V KKL  MWN  A  DK  YEKKA KLKEKY+KDIAA+  KGKP++AKK  +KAEK KKK
Sbjct: 799 VVKKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKK 858

Query: 153 KEEDK 157
           KEE++
Sbjct: 859 KEEEE 863



 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 83  KEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAK 140
           K++P  S+  S+  KK  E W  I   +K  +E  A   K  YE+++  +     P   K
Sbjct: 703 KKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTY---IPPKGEK 759

Query: 141 KGAIKAEKCKKK 152
           K   K     K+
Sbjct: 760 KKKFKDPNAPKR 771


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  154 bits (390), Expect = 4e-38
 Identities = 78/124 (62%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D A Y+REMK Y+PPK + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
            AKKLGEMW+  +  DK PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184

Query: 153 KEED 156
            E +
Sbjct: 185 NEPE 188



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 115
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63

Query: 116 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  154 bits (390), Expect = 4e-38
 Identities = 78/124 (62%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D A Y+REMK Y+PPK + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
            AKKLGEMW+  +  DK PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184

Query: 153 KEED 156
            E +
Sbjct: 185 NEPE 188



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 115
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63

Query: 116 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  154 bits (390), Expect = 4e-38
 Identities = 78/124 (62%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K D A Y+REMK Y+PPK + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
            AKKLGEMW+  +  DK PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK
Sbjct: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184

Query: 153 KEED 156
            E +
Sbjct: 185 NEPE 188



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 115
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63

Query: 116 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  129 bits (324), Expect = 2e-30
 Identities = 72/128 (56%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  K D   Y+REMK Y P K   K K  DPNAPK PP  FF+F SE  PKIK  +PG+S
Sbjct: 62  EMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS 119

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149
           I DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+A +  KGK D AK  A  A   
Sbjct: 120 IGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVAR-- 177

Query: 150 KKKKEEDK 157
           KK +EED+
Sbjct: 178 KKVEEEDE 185



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  ++  +K  +++ A
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64

Query: 117 VKLKEKYEKDI----AAFGGKGKPD 137
              K +Y++++     A GGK K D
Sbjct: 65  KADKVRYDREMKDYGPAKGGKKKKD 89


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  128 bits (321), Expect = 4e-30
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISD 92
           K D  HY++E+K Y P K   K   +DPNAPK PP  FF+F SE CPK K  +PG+ I D
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKK---KDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGD 121

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMW  + + +K PY  +A KLKEKYEKD+A +  KGK D AK  A  A+K  ++
Sbjct: 122 VAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEE 181

Query: 153 KEEDK 157
           ++ED+
Sbjct: 182 EDEDE 186



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64

Query: 117 VKLKEKYEKDI----AAFGGKGK-PDAAKK 141
              K  Y+++I     A GGK K P+A K+
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  128 bits (321), Expect = 4e-30
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISD 92
           K D  HY++E+K Y P K   K   +DPNAPK PP  FF+F SE CPK K  +PG+ I D
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKK---KDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGD 121

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
           VAKKLGEMW  + + +K PY  +A KLKEKYEKD+A +  KGK D AK  A  A+K  ++
Sbjct: 122 VAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEE 181

Query: 153 KEEDK 157
           ++ED+
Sbjct: 182 EDEDE 186



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64

Query: 117 VKLKEKYEKDI----AAFGGKGK-PDAAKK 141
              K  Y+++I     A GGK K P+A K+
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  123 bits (308), Expect = 1e-28
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%)

Query: 11  STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70
           S + S +    +S+   +  +  K D   Y+REMK Y P K   K   +DPNAPK PP  
Sbjct: 42  SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98

Query: 71  FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129
           FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+  
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158

Query: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164
              KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  123 bits (308), Expect = 1e-28
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%)

Query: 11  STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70
           S + S +    +S+   +  +  K D   Y+REMK Y P K   K   +DPNAPK PP  
Sbjct: 42  SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98

Query: 71  FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129
           FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+  
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158

Query: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164
              KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  123 bits (308), Expect = 1e-28
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%)

Query: 11  STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70
           S + S +    +S+   +  +  K D   Y+REMK Y P K   K   +DPNAPK PP  
Sbjct: 42  SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98

Query: 71  FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129
           FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+  
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158

Query: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164
              KGK   AK+ A +  +K +++ EED+    K K
Sbjct: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  120 bits (302), Expect = 7e-28
 Identities = 71/153 (46%), Positives = 93/153 (60%), Gaps = 5/153 (3%)

Query: 6   KLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPK 65
           K P  S + S +    + +   +  +  K D  H +REMK   P K   K K  DP+APK
Sbjct: 16  KSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPK 71

Query: 66  SPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYE 124
            PP  FF+FSSE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K  KLKEKYE
Sbjct: 72  RPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYE 131

Query: 125 KDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 157
           KD+A    KGK D +K+ A  A K  ++++ED+
Sbjct: 132 KDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDE 164


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  119 bits (299), Expect = 1e-27
 Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  K D  H +REMK   P K   K K  DP+APK PP  FF+FSSE  PKIK  +PG+S
Sbjct: 59  EMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS 114

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149
           I DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A K 
Sbjct: 115 IGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 174

Query: 150 KKKKEEDK 157
            ++++ED+
Sbjct: 175 VEEEDEDE 182



 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 60  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 119
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64

Query: 120 KEKYEKDI--AAFGGKGKPD 137
           K   ++++   A GGK K D
Sbjct: 65  KVHCDREMKGPAKGGKKKKD 84


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  119 bits (299), Expect = 1e-27
 Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  K D  H +REMK   P K   K K  DP+APK PP  FF+FSSE  PKIK  +PG+S
Sbjct: 59  EMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS 114

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149
           I DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A K 
Sbjct: 115 IGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 174

Query: 150 KKKKEEDK 157
            ++++ED+
Sbjct: 175 VEEEDEDE 182



 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 60  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 119
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64

Query: 120 KEKYEKDI--AAFGGKGKPD 137
           K   ++++   A GGK K D
Sbjct: 65  KVHCDREMKGPAKGGKKKKD 84


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  119 bits (299), Expect = 1e-27
 Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  K D  H +REMK   P K   K K  DP+APK PP  FF+FSSE  PKIK  +PG+S
Sbjct: 59  EMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS 114

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149
           I DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A K 
Sbjct: 115 IGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 174

Query: 150 KKKKEEDK 157
            ++++ED+
Sbjct: 175 VEEEDEDE 182



 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 60  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 119
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64

Query: 120 KEKYEKDI--AAFGGKGKPD 137
           K   ++++   A GGK K D
Sbjct: 65  KVHCDREMKGPAKGGKKKKD 84


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  111 bits (278), Expect = 4e-25
 Identities = 67/139 (48%), Positives = 87/139 (62%), Gaps = 7/139 (5%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  KVD  HY++EMK   P +   K   +DPNA K P   FF+F SE  PKIK  +PG+S
Sbjct: 62  EMAKVDKVHYDQEMKDNGPVEGGKK---KDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS 118

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAK---KGAIKA 146
           I D+AKKLGEMW   ++ +K PY  KA  LKEKYEKD+A +  KGK D+AK   K A K 
Sbjct: 119 IGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKK 178

Query: 147 EKCKKKKEEDKMRNMKIKK 165
            K K K++E++    + KK
Sbjct: 179 VKEKDKEDEEEEEEEEEKK 197


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  111 bits (278), Expect = 4e-25
 Identities = 67/139 (48%), Positives = 87/139 (62%), Gaps = 7/139 (5%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  KVD  HY++EMK   P +   K   +DPNA K P   FF+F SE  PKIK  +PG+S
Sbjct: 62  EMAKVDKVHYDQEMKDNGPVEGGKK---KDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS 118

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAK---KGAIKA 146
           I D+AKKLGEMW   ++ +K PY  KA  LKEKYEKD+A +  KGK D+AK   K A K 
Sbjct: 119 IGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKK 178

Query: 147 EKCKKKKEEDKMRNMKIKK 165
            K K K++E++    + KK
Sbjct: 179 VKEKDKEDEEEEEEEEEKK 197


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  111 bits (278), Expect = 4e-25
 Identities = 67/139 (48%), Positives = 87/139 (62%), Gaps = 7/139 (5%)

Query: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89
           +  KVD  HY++EMK   P +   K   +DPNA K P   FF+F SE  PKIK  +PG+S
Sbjct: 62  EMAKVDKVHYDQEMKDNGPVEGGKK---KDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS 118

Query: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAK---KGAIKA 146
           I D+AKKLGEMW   ++ +K PY  KA  LKEKYEKD+A +  KGK D+AK   K A K 
Sbjct: 119 IGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKK 178

Query: 147 EKCKKKKEEDKMRNMKIKK 165
            K K K++E++    + KK
Sbjct: 179 VKEKDKEDEEEEEEEEEKK 197


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 38/102 (37%), Positives = 65/102 (63%), Gaps = 2/102 (1%)

Query: 57  KFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 115
           K +DPNAPK P  A+ ++ +    KIK +HPG+SI+D++KK GE+W  ++++ K  +++K
Sbjct: 540 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRK 599

Query: 116 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 157
           A   +  YEK +  + G G+ +++K+   K +K  K K E K
Sbjct: 600 AEDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 640


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 6/122 (4%)

Query: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
           K+D A Y+ EM  Y+  + + + +  DP  P+ PP +F +F  +   ++K E+P  S+  
Sbjct: 65  KLDKARYQEEMMNYVGKRKKRRKR--DPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ 122

Query: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA-EKCKK 151
           VAK  G+MW+   + +KHPYE++   L+ KY +++  +  + + +A KK  + A  +C+ 
Sbjct: 123 VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELY--RKQCNARKKYRMSARNRCRG 180

Query: 152 KK 153
           K+
Sbjct: 181 KR 182



 Score = 30.8 bits (68), Expect = 0.90
 Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 12/107 (11%)

Query: 88  LSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGK------------ 135
           +   + ++K  E W  I++ +K  YE  A   K +Y++++  + GK K            
Sbjct: 36  VGFKEFSRKCSEKWRSISKHEKAKYEALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRR 95

Query: 136 PDAAKKGAIKAEKCKKKKEEDKMRNMKIKKIKFPMYSALTRLGDHDF 182
           P ++     +    + K+E      +++ K    M+S  T L  H +
Sbjct: 96  PPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPY 142


>gi|57232748 HMG2 like isoform 2 [Homo sapiens]
          Length = 112

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 55  KMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDKHPYE 113
           K +  DP  P+ PP +F +F  +   ++K E+P  S+  VAK  G+MW+   + +KHPYE
Sbjct: 10  KRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYE 69

Query: 114 KKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA-EKCKKKK 153
           ++   L+ KY +++  +  + + +A KK  + A  +C+ K+
Sbjct: 70  QRVALLRAKYFEELELY--RKQCNARKKYRMSARNRCRGKR 108


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 50  PKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDD 108
           PK   K K +DPN P+ P  A+ +F  +    IK ++P  +  +V+K +  MW+ + E+ 
Sbjct: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306

Query: 109 KHPYEKKAVKLKEKYEKDIAAF 130
           K  Y+KK    K++Y K +AA+
Sbjct: 307 KQVYKKKTEAAKKEYLKQLAAY 328


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 50  PKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDD 108
           PK   K K +DPN P+ P  A+ +F  +    IK ++P  +  +V+K +  MW+ + E+ 
Sbjct: 236 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ 295

Query: 109 KHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGA 143
           K  Y++K    K++Y K +AA+       AA + A
Sbjct: 296 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESA 330


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,653,280
Number of Sequences: 37866
Number of extensions: 367031
Number of successful extensions: 1554
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1303
Number of HSP's gapped (non-prelim): 251
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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