Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239746620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746620 PREDICTED: hypothetical protein XP_002344228 [Homo
sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757607 PREDICTED: hypothetical protein [Homo sapiens] 255 6e-69
gi|239752118 PREDICTED: hypothetical protein XP_002348116 [Homo ... 255 6e-69
gi|239746620 PREDICTED: hypothetical protein XP_002344228 [Homo ... 255 6e-69
gi|153792074 proline rich 12 [Homo sapiens] 37 0.003
gi|24497589 aristaless related homeobox [Homo sapiens] 37 0.003
gi|40288197 GATA binding protein 6 [Homo sapiens] 37 0.004
gi|119220564 one cut domain, family member 2 [Homo sapiens] 36 0.006
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 36 0.008
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 36 0.008
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ... 35 0.013
gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens] 35 0.013
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 35 0.013
gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.017
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 34 0.022
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 34 0.022
gi|120587019 zinc finger protein 318 [Homo sapiens] 34 0.022
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 34 0.022
gi|57864582 hornerin [Homo sapiens] 34 0.029
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 34 0.029
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 34 0.029
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 34 0.029
gi|13994190 frizzled 8 [Homo sapiens] 34 0.029
gi|239754935 PREDICTED: hypothetical protein [Homo sapiens] 33 0.038
gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo ... 33 0.038
gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo ... 33 0.038
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 33 0.050
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 33 0.050
gi|239757097 PREDICTED: hypothetical protein [Homo sapiens] 33 0.050
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 33 0.050
>gi|239757607 PREDICTED: hypothetical protein [Homo sapiens]
Length = 120
Score = 255 bits (651), Expect = 6e-69
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG 60
MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG
Sbjct: 1 MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG 60
Query: 61 EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS 120
EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS
Sbjct: 61 EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS 120
>gi|239752118 PREDICTED: hypothetical protein XP_002348116 [Homo
sapiens]
Length = 120
Score = 255 bits (651), Expect = 6e-69
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG 60
MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG
Sbjct: 1 MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG 60
Query: 61 EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS 120
EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS
Sbjct: 61 EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS 120
>gi|239746620 PREDICTED: hypothetical protein XP_002344228 [Homo
sapiens]
Length = 120
Score = 255 bits (651), Expect = 6e-69
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG 60
MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG
Sbjct: 1 MHSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAG 60
Query: 61 EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS 120
EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS
Sbjct: 61 EGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHVSTFQHRRREQPS 120
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 24/96 (25%)
Query: 10 PLSSPAH-----LSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRA 64
P PAH LS G + P + L C GGG+ S G G
Sbjct: 302 PPPPPAHALQHYLSCGGSYPSMGHRANLA-CSPLGGGEP--------------SPGAGEP 346
Query: 65 GHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGG 100
GPS T G++ R GP +A GG G GGG
Sbjct: 347 SKAGPSGATAGASGRATGPEAAGGGGAGG----GGG 378
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 37.0 bits (84), Expect = 0.003
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 3 SRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGD--AGDRRAGPAAAPRHHSAG 60
SR+ P + S+ P + +LRR PGGG G A AAA +A
Sbjct: 56 SRADPEKAVQGSPKSSSAPFEAELHLPPKLRRLYGPGGGRLLQGAAAAAAAAAAAAAAAA 115
Query: 61 EGRAGHKG----PSPPTRGSNLRVLGPASAAGGARSGDCA 96
AG +G P PPT R G +AA A + A
Sbjct: 116 TATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAAA 155
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 36.6 bits (83), Expect = 0.004
Identities = 32/102 (31%), Positives = 40/102 (39%), Gaps = 12/102 (11%)
Query: 2 HSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTP----GGGDAGDRRAGPAAAPRHH 57
H + S S P + A P P S D+P GGG AG AGP A
Sbjct: 204 HLQGSGSGPANHAGGAGAHPGWPQAS-------ADSPPYGSGGGAAGGGAAGPGGAGSAA 256
Query: 58 SAGEGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
+ R + PSPP R G +AAG +G + GG
Sbjct: 257 AHVSARFPY-SPSPPMANGAAREPGGYAAAGSGGAGGVSGGG 297
Score = 29.3 bits (64), Expect = 0.72
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 49 GPAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCPITKAHV 108
G + P +H+ G G H G + S P + GGA G A GG AHV
Sbjct: 207 GSGSGPANHAGGAG--AHPGWPQASADSP-----PYGSGGGAAGGGAAGPGGAGSAAAHV 259
Query: 109 S 109
S
Sbjct: 260 S 260
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 36.2 bits (82), Expect = 0.006
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 39 GGGDAGDRRAGPA------AAPRHHSAGEGRAGH-KGPSPPTRGSNLRVLGPASAAGGAR 91
GGG G GP A+P H AG G AG +GP PP + LG A+AA A
Sbjct: 44 GGGGGGGGGGGPGHEQELLASPSPHHAGRGAAGSLRGPPPPPTAH--QELGTAAAAAAAA 101
Query: 92 S 92
S
Sbjct: 102 S 102
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 35.8 bits (81), Expect = 0.008
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 34 RCDTPGGGDAGD-RRAGPAAAPRHHSAGEGRAGHKGPSPPTRGS---NLRVLGPASAAGG 89
R P GG +G +R GP R G PSPP RG+ GPA+ +GG
Sbjct: 15 RARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGRSGGGPAAQSGG 74
Query: 90 ARSGDCARGGGCP 102
G R G P
Sbjct: 75 DGGGLPRRAGAEP 87
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 35.8 bits (81), Expect = 0.008
Identities = 41/129 (31%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 3 SRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRC--DTPGG-----GDAGDRRAG---PAA 52
+RS P P P L P P S RL + P G R+ P
Sbjct: 1438 NRSRP--PEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGG 1495
Query: 53 APRHHSAGEGRAGHKGPSPPTRGSNLRV-LGPASAAGGARSGDCARG-GGCPITKAHVST 110
PRH P PPTR RV G +S G RG GG P A VS
Sbjct: 1496 HPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSP 1555
Query: 111 FQHRRREQP 119
F +RRE+P
Sbjct: 1556 FPPKRRERP 1564
>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
sapiens]
Length = 233
Score = 35.0 bits (79), Expect = 0.013
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 7 PSLPLSSPAHLSAGPARPDCSRY----SRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEG 62
PS+P S L P P S+Y SR+ R G G R A P G
Sbjct: 116 PSVPPSPLTPLPPSPTAPRRSQYPSPGSRVGRGLGTGRGKLAHRVAPSKEPPERACGSRG 175
Query: 63 RA-GHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGGCP 102
R+ G SP T + PA+A G +G G G P
Sbjct: 176 RSTGWAASSPKTHAAGQ---APAAARSGRGAGPAREGSGAP 213
>gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens]
Length = 949
Score = 35.0 bits (79), Expect = 0.013
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 50 PAAAP---RHHSAGEGRA-GHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
P AP RH+ A EG A GP PP S GP+ AGG R G C G
Sbjct: 433 PGRAPIPHRHYPAPEGPAPAPPGPLPPAPNSGT---GPSGVAGGRRLGKCEAAG 483
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 35.0 bits (79), Expect = 0.013
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 50 PAAAP---RHHSAGEGRA-GHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
P AP RH+ A EG A GP PP S GP+ AGG R G C G
Sbjct: 638 PGRAPIPHRHYPAPEGPAPAPPGPLPPAPNSGT---GPSGVAGGRRLGKCEAAG 688
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 40 GGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
G + G R AGPA R AG A GP PP L + G +RS GG
Sbjct: 167 GRERGGREAGPAHPGREKEAGYSAAVGVGPRPPRERGQL-------SRGASRSSSPGAGG 219
Query: 100 G 100
G
Sbjct: 220 G 220
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 34.7 bits (78), Expect = 0.017
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 39 GGGDAGDRRAGPAAAPRHHSAGEGRAGHKG---PSPPTRGSNLRVLGPASAAGGARSGDC 95
G G A P AAP AG R G G P PP+ L GPA A R
Sbjct: 72 GAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPE 131
Query: 96 ARGGGC 101
G C
Sbjct: 132 GSAGSC 137
Score = 29.3 bits (64), Expect = 0.72
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 5 SSPSLPLS-SPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGR 63
++PS P + +PA +A P P + + R P G AG A PA P + G
Sbjct: 253 AAPSPPAAPAPAAPAAAPPPPPPAPATLAR----PPGHPAGPPTAAPAVPPPAAAQNGGS 308
Query: 64 AGHKGPSPPTRGSNLRVLGPASAAGGARSGDCA 96
AG P G GPA +G G A
Sbjct: 309 AGAAPAPAPAAG------GPAGVSGQPGPGAAA 335
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 11 LSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPS 70
LSSP+ L GPA S + R + AG AGP AA R + G GR +G
Sbjct: 56 LSSPS-LGGGPAAG-----SAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRG 109
Query: 71 P-PTRGSNLRVLGPASAAGGARSGDCARGGGC 101
P GS G + + G S C R C
Sbjct: 110 RFPCAGSG----GRGARSRGCHSPSCCRSSSC 137
Score = 26.6 bits (57), Expect = 4.6
Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 10 PLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKG- 68
P +SPA L RP + + L G A A A P+ SAG G +
Sbjct: 152 PRASPALLICIAPRPRPALPAALHI-----GARATAGLAAKRAQPQLCSAGTAARGRRTR 206
Query: 69 PSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
SPPT P G RSGD RGG
Sbjct: 207 ASPPTP--------PRPRPPGLRSGDVPRGG 229
Score = 26.6 bits (57), Expect = 4.6
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 19 AGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNL 78
A P P R LR D P GG +R G R + G G A + P P R +L
Sbjct: 207 ASPPTPPRPRPPGLRSGDVPRGGARVERPTG-----RRGAGGRGGA-QRIPPWPLRRLSL 260
Query: 79 RVLGPAS 85
+ LG S
Sbjct: 261 QYLGGVS 267
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 11 LSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPS 70
LSSP+ L GPA S + R + AG AGP AA R + G GR +G
Sbjct: 56 LSSPS-LGGGPAAG-----SAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRG 109
Query: 71 P-PTRGSNLRVLGPASAAGGARSGDCARGGGC 101
P GS G + + G S C R C
Sbjct: 110 RFPCAGSG----GRGARSRGCHSPSCCRSSSC 137
Score = 26.9 bits (58), Expect = 3.6
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 4 RSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGR 63
R + P +SPA L RP + + L G A A A P+ SAG
Sbjct: 146 RGREAEPRASPALLICIAPRPRPALPAALHI-----GARATAGLAAKRAQPQLCSAGTAA 200
Query: 64 AGHKG-PSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
G + SPPT P G RSGD RGG
Sbjct: 201 RGRRTRASPPTP--------PRPRPPGLRSGDVPRGG 229
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 11 LSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPS 70
LSSP+ L GPA S + R + AG AGP AA R + G GR +G
Sbjct: 56 LSSPS-LGGGPAAG-----SAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRG 109
Query: 71 P-PTRGSNLRVLGPASAAGGARSGDCARGGGC 101
P GS G + + G S C R C
Sbjct: 110 RFPCAGSG----GRGARSRGCHSPSCCRSSSC 137
Score = 26.9 bits (58), Expect = 3.6
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 4 RSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGR 63
R + P +SPA L RP + + L G A A A P+ SAG
Sbjct: 146 RGREAEPRASPALLICIAPRPRPALPAALHI-----GARATAGLAAKRAQPQLCSAGTAA 200
Query: 64 AGHKG-PSPPTRGSNLRVLGPASAAGGARSGDCARGG 99
G + SPPT P G RSGD RGG
Sbjct: 201 RGRRTRASPPTP--------PRPRPPGLRSGDVPRGG 229
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 12 SSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSP 71
S PA S+ P P S R G G R + R S RA PSP
Sbjct: 33 SGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPPRARRGSPSP 92
Query: 72 PTRGSNLRVLGPASAAGGARS---GDCARGG 99
P RG L GPA G +R D AR G
Sbjct: 93 P-RGRRLFPPGPAGFRGSSRGESRADYARDG 122
Score = 25.8 bits (55), Expect = 7.9
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 9/53 (16%)
Query: 27 SRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNLR 79
S S R D GGG R +G ++ P S+ P PP GS+ R
Sbjct: 8 SSVSSHRPKDDGGGGPRSGRSSGSSSGPARRSS---------PPPPPSGSSSR 51
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 34.3 bits (77), Expect = 0.022
Identities = 34/110 (30%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 15 AHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTR 74
A L+ P C R RR PG GD A PA R +G AG G S R
Sbjct: 16 AGLALRELEPGCGSPGRGRRGPRPGPGD----EAAPALGRRGKGSGGPEAGADGLSRGER 71
Query: 75 GSNLRVLGPASA--AGGAR---SGDCARGGGCPITKAHVSTFQHRRREQP 119
G + SA AG R +G GGG + +S +R P
Sbjct: 72 GPRRAAVPELSAQPAGSPRASLAGSDGGGGGGSARSSGISLGYDQRHGSP 121
Score = 30.4 bits (67), Expect = 0.32
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 17 LSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAA---PRHHSAGEGRAGHK-GPSPP 72
LSA PA R + GGG G R+ + RH S GR+ + GP PP
Sbjct: 81 LSAQPAGSP-----RASLAGSDGGGGGGSARSSGISLGYDQRHGSPRSGRSDPRPGPGPP 135
Query: 73 TRG---SNLRVLGPASAAGGARSGDCARGGGCP 102
+ G S++ LG +AG D G CP
Sbjct: 136 SVGSARSSVSSLGSRGSAGA--YADFLPPGACP 166
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 33.9 bits (76), Expect = 0.029
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 27 SRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASA 86
SR + R + G R G + S+G GR G P+RG + LG +S+
Sbjct: 1668 SRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSS 1727
Query: 87 AG--GARSGDCARGGGCPITKAHVSTF-QH 113
G G+ SG + G H S F QH
Sbjct: 1728 HGQHGSGSGRSSSRGPYESRSGHSSVFGQH 1757
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 27 SRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASA 86
SR + R + G G + S+G GR G P+RG + LG +S+
Sbjct: 1198 SRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSS 1257
Query: 87 AG--GARSGDCARGGGCPITKAHVSTF-QH 113
G G+ SG + G H S F QH
Sbjct: 1258 HGQHGSGSGRSSSRGPYESRSGHSSVFGQH 1287
Score = 31.6 bits (70), Expect = 0.14
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 27 SRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASA 86
SR + R + G R G + S+G GR G P+RG + G +S+
Sbjct: 2138 SRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSS 2197
Query: 87 AG--GARSGDCARGGGCPITKAHVSTF-QH 113
G G+ SG + G H S F QH
Sbjct: 2198 HGQHGSGSGRSSSRGPYESRSGHSSVFGQH 2227
Score = 31.6 bits (70), Expect = 0.14
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 27 SRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASA 86
SR + R + G G + S+G GR G P+RG + LG +S+
Sbjct: 2608 SRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSS 2667
Query: 87 AG--GARSGDCARGGGCPITKAHVSTF-QH 113
G G+ SG + G H S F QH
Sbjct: 2668 HGQHGSGSGRSSSRGPYESRLGHSSVFGQH 2697
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 11 LSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPS 70
L SP + AGPA P + R R GG GP +PR + GEG G G +
Sbjct: 266 LGSPP-IPAGPAAPGRAGERRAARQWRKRGG-------GPGVSPREGAQGEGVRG--GVT 315
Query: 71 PPTRGSNLRVL-GPASAAGGA 90
P RGS+ + PA+ GGA
Sbjct: 316 PRARGSSTCLRPSPATWQGGA 336
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 11 LSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPS 70
L SP + AGPA P + R R GG GP +PR + GEG G G +
Sbjct: 360 LGSPP-IPAGPAAPGRAGERRAARQWRKRGG-------GPGVSPREGAQGEGVRG--GVT 409
Query: 71 PPTRGSNLRVL-GPASAAGGA 90
P RGS+ + PA+ GGA
Sbjct: 410 PRARGSSTCLRPSPATWQGGA 430
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 11 LSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGPS 70
L SP + AGPA P + R R GG GP +PR + GEG G G +
Sbjct: 360 LGSPP-IPAGPAAPGRAGERRAARQWRKRGG-------GPGVSPREGAQGEGVRG--GVT 409
Query: 71 PPTRGSNLRVL-GPASAAGGA 90
P RGS+ + PA+ GGA
Sbjct: 410 PRARGSSTCLRPSPATWQGGA 430
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 33.9 bits (76), Expect = 0.029
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 33 RRCDTPGGGDAGDRRAG----PAAAPRHHSAGEGRAGHKGPSPPTRGSNLRVLGPASAAG 88
RR P G+ +G P A P H G G G +PP RG G A G
Sbjct: 165 RRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGG--GKARPPG 222
Query: 89 GARSGDCARGGGCPITKAHVSTFQH 113
G + C G C VS+ +H
Sbjct: 223 GG-AAPCEPGCQCRAPMVSVSSERH 246
Score = 29.3 bits (64), Expect = 0.72
Identities = 28/101 (27%), Positives = 32/101 (31%), Gaps = 19/101 (18%)
Query: 13 SPAHLSAGPARPDCSRYSRL-------------RRCDTPGGGDAGDRRAGPAAAPRHHSA 59
+P G A PD R RL R D + RR P +
Sbjct: 119 APLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDYNRTDLTTAAPSPPRRLPPPPPGEQPPS 178
Query: 60 GEGRAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGG 100
G G G PP RG G GG + ARGGG
Sbjct: 179 GSGHGRPPGARPPHRG------GGRGGGGGDAAAPPARGGG 213
>gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 397
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 3 SRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGD---AGDRRAGPAA---APRH 56
+R++P P P L ARP C + LR C +PGG RR G A A R
Sbjct: 274 ARAAP--PCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSRRHGTQAALGACRV 331
Query: 57 HSAGEGRAGHK 67
SAG G G +
Sbjct: 332 GSAGRGLLGER 342
>gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
sapiens]
Length = 397
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 3 SRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGD---AGDRRAGPAA---APRH 56
+R++P P P L ARP C + LR C +PGG RR G A A R
Sbjct: 274 ARAAP--PCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSRRHGTQAALGACRV 331
Query: 57 HSAGEGRAGHK 67
SAG G G +
Sbjct: 332 GSAGRGLLGER 342
>gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo
sapiens]
Length = 397
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 3 SRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGD---AGDRRAGPAA---APRH 56
+R++P P P L ARP C + LR C +PGG RR G A A R
Sbjct: 274 ARAAP--PCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSRRHGTQAALGACRV 331
Query: 57 HSAGEGRAGHK 67
SAG G G +
Sbjct: 332 GSAGRGLLGER 342
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 33.1 bits (74), Expect = 0.050
Identities = 34/113 (30%), Positives = 39/113 (34%), Gaps = 13/113 (11%)
Query: 2 HSRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTP---GGGD---AGDRRAGPAAAP- 54
H P P+ P GP P R P G GD G R GP P
Sbjct: 642 HFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPG 701
Query: 55 RHHSAGEGRAGHKGPSPP-----TRGSNLRVLGPASAAGGARSGDCARGGGCP 102
+H GR G++ P PP RG GP + GG G GG P
Sbjct: 702 PYHRGRGGRGGNEPPPPPPPFRGARGGRSGG-GPPNGRGGPGGGMVGGGGHRP 753
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 33.1 bits (74), Expect = 0.050
Identities = 32/98 (32%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Query: 3 SRSSPSLPLSSPAHLSAGPARPDCSRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEG 62
+RS P LS A S SR R R T GGG RR AA S G G
Sbjct: 118 TRSGPRRCLSQDASRSG-------SRVCRSRP-QTRGGGGKKPRRGQKAATAGAKSRGGG 169
Query: 63 RAGHKGPSPPTRGSNLRVLGPASAAGGARSGDCARGGG 100
G RG G S GG + AR G
Sbjct: 170 VRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVG 207
>gi|239757097 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 33.1 bits (74), Expect = 0.050
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 20 GPARPDC-----SRYSRLRRCDTPGGGDAGDRRAGPAAAPRHHSAGEGRAGHKGP 69
G +R C SR SR RRC + GG R PRH A G + H P
Sbjct: 33 GSSRKACPSWHRSRSSRRRRCCSGGGSPGQCRSCSSGPGPRHCRARRGPSAHLAP 87
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.1 bits (74), Expect = 0.050
Identities = 35/103 (33%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 7 PSLPLSSPAHLSAGPARPDC-----SRYSRLRRCDTPG---GGDAGDRRAGPAAAPRHHS 58
P S A AGPA P C R + RR PG G AG RAG A A S
Sbjct: 86 PPARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAA--SS 143
Query: 59 AGEGRAGHKGPSPPTRGSNL----RVLGPASAAGGARSGDCAR 97
AG + PP G++L R L +A RS +R
Sbjct: 144 AGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSR 186
Score = 28.5 bits (62), Expect = 1.2
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 6 SPSLPLSSPAHLS-AGPARPDCSRYSR---LRRCDTPGGGD---AGDR---RAGPAAAPR 55
+P SPA + AG A S +R RR P GG AG R R G AA PR
Sbjct: 121 APGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPR 180
Query: 56 HHSAGEGRAGHKGPSPPTRGS 76
S+ A GP P G+
Sbjct: 181 SPSSSRRWAAMPGPGAPRPGA 201
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,956,963
Number of Sequences: 37866
Number of extensions: 411833
Number of successful extensions: 2573
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 354
Number of HSP's that attempted gapping in prelim test: 2164
Number of HSP's gapped (non-prelim): 732
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.