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Search of human proteins with 239746535
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746535 PREDICTED: hypothetical protein XP_002343755 [Homo
sapiens]
(370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746535 PREDICTED: hypothetical protein XP_002343755 [Homo ... 743 0.0
gi|239757530 PREDICTED: hypothetical protein [Homo sapiens] 720 0.0
gi|239752052 PREDICTED: hypothetical protein [Homo sapiens] 720 0.0
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 49 7e-06
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 49 7e-06
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 46 5e-05
gi|116284392 mucin 2 precursor [Homo sapiens] 46 6e-05
gi|38788260 bromodomain PHD finger transcription factor isoform ... 40 0.004
gi|38788274 bromodomain PHD finger transcription factor isoform ... 40 0.004
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 39 0.006
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 39 0.006
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 39 0.006
gi|16445033 ACRC protein [Homo sapiens] 39 0.010
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 38 0.013
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 37 0.028
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 37 0.028
gi|46243671 G protein-coupled receptor 152 [Homo sapiens] 36 0.063
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 34 0.24
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 34 0.24
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 34 0.24
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 34 0.24
gi|94721344 zinc finger, CW type with PWWP domain 1 [Homo sapiens] 33 0.31
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 32 0.70
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] 32 1.2
gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens] 32 1.2
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 31 1.6
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 31 2.0
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 31 2.0
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 31 2.0
>gi|239746535 PREDICTED: hypothetical protein XP_002343755 [Homo
sapiens]
Length = 370
Score = 743 bits (1917), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP
Sbjct: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
Query: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG
Sbjct: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
Query: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH
Sbjct: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
Query: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA
Sbjct: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
Query: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 300
TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD
Sbjct: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 300
Query: 301 RSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 360
RSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD
Sbjct: 301 RSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 360
Query: 361 VMQDQRLNIP 370
VMQDQRLNIP
Sbjct: 361 VMQDQRLNIP 370
>gi|239757530 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 720 bits (1858), Expect = 0.0
Identities = 360/368 (97%), Positives = 365/368 (99%), Gaps = 1/368 (0%)
Query: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP
Sbjct: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
Query: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG
Sbjct: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
Query: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH
Sbjct: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
Query: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA
Sbjct: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
Query: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQ-SDPTDVMQ 299
TAQSDPTDVMQDQSIATAQSDP DVMQD+SIATAQSDPTDVMQD+SIATAQ SDPTDVMQ
Sbjct: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
Query: 300 DRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
D+SIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT
Sbjct: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
Query: 360 DVMQDQRL 367
DVMQD+ +
Sbjct: 361 DVMQDRSI 368
Score = 277 bits (709), Expect = 1e-74
Identities = 146/150 (97%), Positives = 147/150 (98%), Gaps = 1/150 (0%)
Query: 222 SIATAQ-SDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
SIATAQ SDP DVMQDQSIATAQSDPTDVMQDQSIATAQSDP DVMQDRSIATAQSDPTD
Sbjct: 286 SIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTD 345
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD+SIATAQSDPTDVMQDRSIATAQS
Sbjct: 346 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 405
Query: 341 DPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
DPTDVMQDRSIATAQSDPTDVMQDQRLNIP
Sbjct: 406 DPTDVMQDRSIATAQSDPTDVMQDQRLNIP 435
>gi|239752052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 720 bits (1858), Expect = 0.0
Identities = 360/368 (97%), Positives = 365/368 (99%), Gaps = 1/368 (0%)
Query: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP
Sbjct: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
Query: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG
Sbjct: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
Query: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH
Sbjct: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
Query: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA
Sbjct: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
Query: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQ-SDPTDVMQ 299
TAQSDPTDVMQDQSIATAQSDP DVMQD+SIATAQSDPTDVMQD+SIATAQ SDPTDVMQ
Sbjct: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
Query: 300 DRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
D+SIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT
Sbjct: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
Query: 360 DVMQDQRL 367
DVMQD+ +
Sbjct: 361 DVMQDRSI 368
Score = 277 bits (709), Expect = 1e-74
Identities = 146/150 (97%), Positives = 147/150 (98%), Gaps = 1/150 (0%)
Query: 222 SIATAQ-SDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
SIATAQ SDP DVMQDQSIATAQSDPTDVMQDQSIATAQSDP DVMQDRSIATAQSDPTD
Sbjct: 286 SIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTD 345
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD+SIATAQSDPTDVMQDRSIATAQS
Sbjct: 346 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 405
Query: 341 DPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
DPTDVMQDRSIATAQSDPTDVMQDQRLNIP
Sbjct: 406 DPTDVMQDRSIATAQSDPTDVMQDQRLNIP 435
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 48.9 bits (115), Expect = 7e-06
Identities = 42/139 (30%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T + P T S PT + I T S P R I T S PT
Sbjct: 117 TPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPT- 175
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT T S PT + I T S PT R I T S
Sbjct: 176 -------LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSS 228
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT R I T S PT
Sbjct: 229 TPTLTPSSRPILTRSSTPT 247
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/139 (29%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + I T S PT + I T S P T S PT
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTP--------TLTPSSTPTL 184
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT R I T S PT + I T S PT R I T S
Sbjct: 185 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSS 244
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T + PT
Sbjct: 245 TPTLTPSSTPTLTPSNTPT 263
Score = 47.4 bits (111), Expect = 2e-05
Identities = 39/139 (28%), Positives = 43/139 (30%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P+ T S PT T S P R I T S PT
Sbjct: 157 TPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 216
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
R I T S PT R I T S PT T + PT + T +
Sbjct: 217 TPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSN 276
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 277 TPTLTPSSTPTLTPSSTPT 295
Score = 46.2 bits (108), Expect = 5e-05
Identities = 40/135 (29%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQD 284
T + P + T + PT T S P R I T S PT
Sbjct: 105 TPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 164
Query: 285 RSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTD 344
R I T S PT T S PT T S PT R I T S PT
Sbjct: 165 RPILTRSSTPT--------LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 216
Query: 345 VMQDRSIATAQSDPT 359
R I T S PT
Sbjct: 217 TPSSRPILTPSSTPT 231
Score = 44.3 bits (103), Expect = 2e-04
Identities = 39/137 (28%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 223 IATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVM 282
I T S P + I T S PT T S P T S PT
Sbjct: 151 ILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPT--------LTPSSTPTLTP 202
Query: 283 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDP 342
R I T S PT R I T S PT + I T S PT T + P
Sbjct: 203 SSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTP 262
Query: 343 TDVMQDRSIATAQSDPT 359
T + T + PT
Sbjct: 263 TLTPSNTPTLTPSNTPT 279
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/139 (26%), Positives = 44/139 (31%), Gaps = 2/139 (1%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + T + PT T S P + + I T S PT
Sbjct: 39 TPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP--TLTPQPILTRSSTPTL 96
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T + PT + T + PT T S PT R I T S
Sbjct: 97 TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSS 156
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT R I T S PT
Sbjct: 157 TPTLTPSSRPILTRSSTPT 175
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/139 (26%), Positives = 43/139 (30%), Gaps = 2/139 (1%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T + P T S PT + Q I T S P T + PT
Sbjct: 55 TPTLTPSNTPTLTPSSTPTLTPSSTPT--LTPQPILTRSSTPTLTPSSPPTLTPSNTPTL 112
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
+ T + PT T S PT + I T S PT R I T S
Sbjct: 113 TPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSS 172
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 173 TPTLTPSSTPTLTPSSTPT 191
Score = 40.4 bits (93), Expect = 0.003
Identities = 37/138 (26%), Positives = 42/138 (30%), Gaps = 2/138 (1%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + Q I T S PT T + P + T + PT
Sbjct: 71 TPTLTPSSTP--TLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTL 128
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT R I T S PT + I T S PT T S
Sbjct: 129 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSS 188
Query: 341 DPTDVMQDRSIATAQSDP 358
PT T S P
Sbjct: 189 TPTLTPSSTPTLTPSSRP 206
Score = 38.5 bits (88), Expect = 0.010
Identities = 36/141 (25%), Positives = 43/141 (30%), Gaps = 6/141 (4%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPT----- 279
T S P Q I T S PT T + P + T S PT
Sbjct: 19 TPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSS 78
Query: 280 -DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATA 338
+ + I T S PT T + PT + T + PT T
Sbjct: 79 TPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 138
Query: 339 QSDPTDVMQDRSIATAQSDPT 359
S PT R I T S PT
Sbjct: 139 SSTPTLTPSSRPILTRSSTPT 159
Score = 33.9 bits (76), Expect = 0.24
Identities = 30/119 (25%), Positives = 37/119 (31%), Gaps = 2/119 (1%)
Query: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 300
T S PT T S P+ T S PT + T + PT
Sbjct: 11 TPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSS 70
Query: 301 RSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
T S PT + Q I T S PT T + PT + T + PT
Sbjct: 71 TPTLTPSSTPT--LTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPT 127
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 48.9 bits (115), Expect = 7e-06
Identities = 42/139 (30%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T + P T S PT + I T S P R I T S PT
Sbjct: 117 TPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPT- 175
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT T S PT + I T S PT R I T S
Sbjct: 176 -------LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSS 228
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT R I T S PT
Sbjct: 229 TPTLTPSSRPILTRSSTPT 247
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/139 (29%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + I T S PT + I T S P T S PT
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTP--------TLTPSSTPTL 184
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT R I T S PT + I T S PT R I T S
Sbjct: 185 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSS 244
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T + PT
Sbjct: 245 TPTLTPSSTPTLTPSNTPT 263
Score = 47.4 bits (111), Expect = 2e-05
Identities = 39/139 (28%), Positives = 43/139 (30%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P+ T S PT T S P R I T S PT
Sbjct: 157 TPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 216
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
R I T S PT R I T S PT T + PT + T +
Sbjct: 217 TPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSN 276
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 277 TPTLTPSSTPTLTPSSTPT 295
Score = 46.2 bits (108), Expect = 5e-05
Identities = 40/135 (29%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQD 284
T + P + T + PT T S P R I T S PT
Sbjct: 105 TPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 164
Query: 285 RSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTD 344
R I T S PT T S PT T S PT R I T S PT
Sbjct: 165 RPILTRSSTPT--------LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 216
Query: 345 VMQDRSIATAQSDPT 359
R I T S PT
Sbjct: 217 TPSSRPILTPSSTPT 231
Score = 44.3 bits (103), Expect = 2e-04
Identities = 39/137 (28%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 223 IATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVM 282
I T S P + I T S PT T S P T S PT
Sbjct: 151 ILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPT--------LTPSSTPTLTP 202
Query: 283 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDP 342
R I T S PT R I T S PT + I T S PT T + P
Sbjct: 203 SSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTP 262
Query: 343 TDVMQDRSIATAQSDPT 359
T + T + PT
Sbjct: 263 TLTPSNTPTLTPSNTPT 279
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/139 (26%), Positives = 44/139 (31%), Gaps = 2/139 (1%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + T + PT T S P + + I T S PT
Sbjct: 39 TPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP--TLTPQPILTRSSTPTL 96
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T + PT + T + PT T S PT R I T S
Sbjct: 97 TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSS 156
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT R I T S PT
Sbjct: 157 TPTLTPSSRPILTRSSTPT 175
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/139 (26%), Positives = 43/139 (30%), Gaps = 2/139 (1%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T + P T S PT + Q I T S P T + PT
Sbjct: 55 TPTLTPSNTPTLTPSSTPTLTPSSTPT--LTPQPILTRSSTPTLTPSSPPTLTPSNTPTL 112
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
+ T + PT T S PT + I T S PT R I T S
Sbjct: 113 TPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSS 172
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 173 TPTLTPSSTPTLTPSSTPT 191
Score = 40.4 bits (93), Expect = 0.003
Identities = 37/138 (26%), Positives = 42/138 (30%), Gaps = 2/138 (1%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + Q I T S PT T + P + T + PT
Sbjct: 71 TPTLTPSSTP--TLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTL 128
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT R I T S PT + I T S PT T S
Sbjct: 129 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSS 188
Query: 341 DPTDVMQDRSIATAQSDP 358
PT T S P
Sbjct: 189 TPTLTPSSTPTLTPSSRP 206
Score = 38.5 bits (88), Expect = 0.010
Identities = 36/141 (25%), Positives = 43/141 (30%), Gaps = 6/141 (4%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPT----- 279
T S P Q I T S PT T + P + T S PT
Sbjct: 19 TPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSS 78
Query: 280 -DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATA 338
+ + I T S PT T + PT + T + PT T
Sbjct: 79 TPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 138
Query: 339 QSDPTDVMQDRSIATAQSDPT 359
S PT R I T S PT
Sbjct: 139 SSTPTLTPSSRPILTRSSTPT 159
Score = 33.9 bits (76), Expect = 0.24
Identities = 30/119 (25%), Positives = 37/119 (31%), Gaps = 2/119 (1%)
Query: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 300
T S PT T S P+ T S PT + T + PT
Sbjct: 11 TPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSS 70
Query: 301 RSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
T S PT + Q I T S PT T + PT + T + PT
Sbjct: 71 TPTLTPSSTPT--LTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPT 127
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 46.2 bits (108), Expect = 5e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 223 IATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVM 282
+A +S PM V+Q + + S P +V+Q + + S PM+V+Q + S P +V+
Sbjct: 713 VAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 772
Query: 283 QDRSIATAQSDPTDVMQDRSIATAQSDP 310
Q + S P V+Q AQ +P
Sbjct: 773 QKEPVQMELSPPMGVVQKE---PAQREP 797
Score = 31.6 bits (70), Expect = 1.2
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDP 278
K + S PM+V+Q + + S P +V+Q + + S PM V+Q AQ +P
Sbjct: 742 KEPVQIELSPPMEVVQKEPVKIELSPPIEVVQKEPVQMELSPPMGVVQKE---PAQREP 797
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 45.8 bits (107), Expect = 6e-05
Identities = 40/144 (27%), Positives = 43/144 (29%), Gaps = 2/144 (1%)
Query: 217 PTGKTSI--ATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATA 274
PT T++ T S P T S PT I T + P I T
Sbjct: 1629 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTT 1688
Query: 275 QSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRS 334
S PT M S T S P S T S P M S T S PT M
Sbjct: 1689 PSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLP 1748
Query: 335 IATAQSDPTDVMQDRSIATAQSDP 358
T S T SI P
Sbjct: 1749 PTTTSSPLTTTPLPPSITPPTFSP 1772
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/106 (29%), Positives = 32/106 (30%)
Query: 257 TAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 316
T S P T S PT I T + P I T S PT M
Sbjct: 1639 TTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTT 1698
Query: 317 QSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVM 362
S T S P S T S P M S T S PT M
Sbjct: 1699 PSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTM 1744
Score = 40.8 bits (94), Expect = 0.002
Identities = 33/119 (27%), Positives = 34/119 (28%)
Query: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 300
T S P T S P I T + P I T S PT M
Sbjct: 1639 TTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTT 1698
Query: 301 RSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
S T S P S T S P M S T S PT M T S T
Sbjct: 1699 PSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLT 1757
Score = 32.3 bits (72), Expect = 0.70
Identities = 33/141 (23%), Positives = 36/141 (25%), Gaps = 7/141 (4%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQD 284
T + P T S PT T S P T S PT
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627
Query: 285 RSIATAQSDPTDVMQDRSI-------ATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 337
+T PT T S PT I T + P I T
Sbjct: 1628 PPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT 1687
Query: 338 AQSDPTDVMQDRSIATAQSDP 358
S PT M S T S P
Sbjct: 1688 TPSPPTTTMTTPSPTTTPSSP 1708
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 39.7 bits (91), Expect = 0.004
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
Query: 228 SDPMDVMQDQSIATAQSD---PTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQD 284
S M V QD+++ AQS P + + +AQ P Q + Q+ P +V
Sbjct: 2370 SPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQP-EVQTQ 2428
Query: 285 RSIAT---AQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSD 341
++++ +++ PT + AQS P +Q QS QS P+ + R +Q
Sbjct: 2429 TTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQS-PSQT-RIRPSTPSQLS 2486
Query: 342 PTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
P Q + T S P + L IP
Sbjct: 2487 PG---QQSQVQTTTSQPIPIQPHTSLQIP 2512
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 39.7 bits (91), Expect = 0.004
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
Query: 228 SDPMDVMQDQSIATAQSD---PTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQD 284
S M V QD+++ AQS P + + +AQ P Q + Q+ P +V
Sbjct: 2244 SPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQP-EVQTQ 2302
Query: 285 RSIAT---AQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSD 341
++++ +++ PT + AQS P +Q QS QS P+ + R +Q
Sbjct: 2303 TTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQS-PSQT-RIRPSTPSQLS 2360
Query: 342 PTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
P Q + T S P + L IP
Sbjct: 2361 PG---QQSQVQTTTSQPIPIQPHTSLQIP 2386
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 39.3 bits (90), Expect = 0.006
Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 3/162 (1%)
Query: 200 LSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQ 259
+S+ L + K ++ P S T P ++ S T + + + + + T
Sbjct: 114 ISESLDMPKTNLSKMAHPE---SSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPETPN 170
Query: 260 SDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSI 319
+D M S Q + T+V Q T+ ++PT +S + T+ + +
Sbjct: 171 TDLMQTTPQESPEILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSEFL 230
Query: 320 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDV 361
DP+ S T PT++ Q T + TDV
Sbjct: 231 QALHPDPSKTPHPESHVTHNPSPTEISQTEFPTTYYQNATDV 272
Score = 31.6 bits (70), Expect = 1.2
Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 8/152 (5%)
Query: 222 SIATAQSDPMDVMQD--------QSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIAT 273
S+ T+ S+ +D+ + +S T PT++ S T + + + T
Sbjct: 109 SLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPET 168
Query: 274 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDR 333
+D S Q + T+V Q T+ ++PT +S + T+
Sbjct: 169 PNTDLMQTTPQESPEILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSE 228
Query: 334 SIATAQSDPTDVMQDRSIATAQSDPTDVMQDQ 365
+ DP+ S T PT++ Q +
Sbjct: 229 FLQALHPDPSKTPHPESHVTHNPSPTEISQTE 260
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 39.3 bits (90), Expect = 0.006
Identities = 37/139 (26%), Positives = 38/139 (27%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P + T S PT T S P T S PT
Sbjct: 75 TPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTL 134
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT T S PT T S PT R I T S
Sbjct: 135 TPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSS 194
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 195 TPTLTPSSTPTLTPSSTPT 213
Score = 38.5 bits (88), Expect = 0.010
Identities = 37/139 (26%), Positives = 39/139 (28%), Gaps = 8/139 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P T S PT T S P T S PT
Sbjct: 123 TPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTL 182
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
R I T S PT T S PT T + PT + T S
Sbjct: 183 TPSSRPILTRSSTPT--------LTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSS 234
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT R T S PT
Sbjct: 235 TPTLTPSSRPTLTRSSTPT 253
Score = 38.5 bits (88), Expect = 0.010
Identities = 37/139 (26%), Positives = 39/139 (28%), Gaps = 8/139 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P T S PT T S P R I T S PT
Sbjct: 139 TPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTL 198
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT T + PT + T S PT R T S
Sbjct: 199 TPSSTPTLTPSSTPT--------LTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSS 250
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 251 TPTLTPSSTPTLTPSSTPT 269
Score = 37.7 bits (86), Expect = 0.017
Identities = 36/139 (25%), Positives = 37/139 (26%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P T S PT T S P T S PT
Sbjct: 107 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTL 166
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT R I T S PT T S PT + S
Sbjct: 167 TPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSS 226
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT T S PT
Sbjct: 227 TPTLTPSSTPTLTPSSRPT 245
Score = 36.6 bits (83), Expect = 0.037
Identities = 35/139 (25%), Positives = 37/139 (26%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P T S PT T S P T S PT
Sbjct: 91 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTL 150
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT T S PT + I T S PT T S
Sbjct: 151 TPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSS 210
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT + S PT
Sbjct: 211 TPTLTPSNTPTLIPSSTPT 229
Score = 33.9 bits (76), Expect = 0.24
Identities = 33/139 (23%), Positives = 35/139 (25%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
T T S P T S PT T S P T S PT
Sbjct: 99 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTL 158
Query: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
T S PT T S P T S PT T +
Sbjct: 159 TPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSN 218
Query: 341 DPTDVMQDRSIATAQSDPT 359
PT + T S PT
Sbjct: 219 TPTLIPSSTPTLTPSSTPT 237
Score = 33.5 bits (75), Expect = 0.31
Identities = 41/160 (25%), Positives = 44/160 (27%), Gaps = 12/160 (7%)
Query: 212 GEVCFPTGK----TSIATAQSDPMDVMQD--------QSIATAQSDPTDVMQDQSIATAQ 259
GE+ P G T T S P + T S PT + T
Sbjct: 38 GEMTGPYGPREMGTPTLTPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPS 97
Query: 260 SDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSI 319
S P T S PT T S PT T S PT
Sbjct: 98 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPT 157
Query: 320 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
T S PT T S PT R I T S PT
Sbjct: 158 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 197
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 39.3 bits (90), Expect = 0.006
Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 3/162 (1%)
Query: 200 LSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQ 259
+S+ L + K ++ P S T P ++ S T + + + + + T
Sbjct: 114 ISESLDMPKTNLSKMAHPE---SSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPETPN 170
Query: 260 SDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSI 319
+D M S Q + T+V Q T+ ++PT +S + T+ + +
Sbjct: 171 TDLMQTTPQESPEILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSEFL 230
Query: 320 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDV 361
DP+ S T PT++ Q T + TDV
Sbjct: 231 QALHPDPSKTPHPESHVTHNPSPTEISQTEFPTTYYQNATDV 272
Score = 31.6 bits (70), Expect = 1.2
Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 8/152 (5%)
Query: 222 SIATAQSDPMDVMQD--------QSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIAT 273
S+ T+ S+ +D+ + +S T PT++ S T + + + T
Sbjct: 109 SLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPET 168
Query: 274 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDR 333
+D S Q + T+V Q T+ ++PT +S + T+
Sbjct: 169 PNTDLMQTTPQESPEILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSE 228
Query: 334 SIATAQSDPTDVMQDRSIATAQSDPTDVMQDQ 365
+ DP+ S T PT++ Q +
Sbjct: 229 FLQALHPDPSKTPHPESHVTHNPSPTEISQTE 260
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 39.3 bits (90), Expect = 0.006
Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 3/162 (1%)
Query: 200 LSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQ 259
+S+ L + K ++ P S T P ++ S T + + + + + T
Sbjct: 114 ISESLDMPKTNLSKMAHPE---SSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPETPN 170
Query: 260 SDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSI 319
+D M S Q + T+V Q T+ ++PT +S + T+ + +
Sbjct: 171 TDLMQTTPQESPEILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSEFL 230
Query: 320 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDV 361
DP+ S T PT++ Q T + TDV
Sbjct: 231 QALHPDPSKTPHPESHVTHNPSPTEISQTEFPTTYYQNATDV 272
Score = 31.6 bits (70), Expect = 1.2
Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 8/152 (5%)
Query: 222 SIATAQSDPMDVMQD--------QSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIAT 273
S+ T+ S+ +D+ + +S T PT++ S T + + + T
Sbjct: 109 SLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPET 168
Query: 274 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDR 333
+D S Q + T+V Q T+ ++PT +S + T+
Sbjct: 169 PNTDLMQTTPQESPEILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSE 228
Query: 334 SIATAQSDPTDVMQDRSIATAQSDPTDVMQDQ 365
+ DP+ S T PT++ Q +
Sbjct: 229 FLQALHPDPSKTPHPESHVTHNPSPTEISQTE 260
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 38.5 bits (88), Expect = 0.010
Identities = 36/125 (28%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 230 PMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSD----PTDVMQDR 285
P D D + SD +DV D S + D D D SD P D D
Sbjct: 215 PDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPD--DSSDDSEAPDDSSDDSEAPDDSSDDS 272
Query: 286 SIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDV 345
SD ++ D S + SD D D +SD +DV +D+S D +DV
Sbjct: 273 EAPDDSSDDSEASDDSSDDSEASD--DSSDDSEAPDDKSDDSDVPEDKS------DDSDV 324
Query: 346 MQDRS 350
D S
Sbjct: 325 PDDNS 329
Score = 34.7 bits (78), Expect = 0.14
Identities = 36/139 (25%), Positives = 49/139 (35%), Gaps = 14/139 (10%)
Query: 230 PMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIAT 289
P D D SD ++ D S + D D D SD +DV D S +
Sbjct: 139 PDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPD--DNSDDSEAPDDNSDDSDVPDDNSDDS 196
Query: 290 AQSDPTDVMQDRS----IATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDV 345
+ + D D S + +SD +DV D SD +DV D S P D
Sbjct: 197 SDDNSDDSSDDNSDDSDVPDDKSDDSDVPDD------SSDDSDVPDDSS--DDSEAPDDS 248
Query: 346 MQDRSIATAQSDPTDVMQD 364
D SD ++ D
Sbjct: 249 SDDSEAPDDSSDDSEAPDD 267
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 38.1 bits (87), Expect = 0.013
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPT 279
K+ +SD D D S ++ SD +D S + S D S ++ SD +
Sbjct: 539 KSDSGKGKSDSSD--SDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSS 596
Query: 280 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQ 339
D + S ++ SD +D + ++SD + D S + ++SD +D S +
Sbjct: 597 D-SSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSD 655
Query: 340 SDPTDVMQDRSIATAQSDPTD 360
S + + S ++ SD +D
Sbjct: 656 SSDSSNSSNSSDSSDSSDSSD 676
Score = 33.9 bits (76), Expect = 0.24
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 218 TGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSD 277
+ +S ++ SD D + ++SD + D S + ++SD D S + S
Sbjct: 598 SSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSS 657
Query: 278 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 337
+ + S ++ SD +D S ++ SD +D D S ++ SD +D S ++
Sbjct: 658 DSSNSSNSSDSSDSSDSSD-SSSSSDSSNSSDSSD-SSDSSNSSESSDSSD--SSDSDSS 713
Query: 338 AQSDPTDVMQDRSIATAQSDPTD 360
SD ++ S ++ SD +D
Sbjct: 714 DSSDSSNSNSSDSDSSNSSDSSD 736
Score = 32.7 bits (73), Expect = 0.54
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 226 AQSDPMDVMQDQSIATAQSDPTDVMQDQSIATA---QSDPMDVMQDRSIATAQSDPTDVM 282
A+ D D D + + + + + D + + +SD D D S ++ SD +D
Sbjct: 510 AEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSD--SDSSDSSNSSDSSDSS 567
Query: 283 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDP 342
S + S +D S ++ SD +D + S ++ SD +D + ++SD
Sbjct: 568 DSDSSDSNSSSDSDSSDSDSSDSSDSDSSD-SSNSSDSSDSSDSSDSSDSSDSSDSKSDS 626
Query: 343 TDVMQDRSIATAQSDPTD 360
+ D S + ++SD +D
Sbjct: 627 SKSESDSSDSDSKSDSSD 644
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 37.0 bits (84), Expect = 0.028
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQS 276
P G I ++ PM Q Q A AQ+ Q Q+ A AQ+ Q ++ A AQ+
Sbjct: 162 PDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 221
Query: 277 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQ------SDPTDVMQDQSIATAQSDPTD-- 328
Q ++ A AQ+ +Q + A Q S PT +++T+ S T
Sbjct: 222 QAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSS 281
Query: 329 ----VMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
S+A S PT Q S A + + PT
Sbjct: 282 TTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPT 316
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 37.0 bits (84), Expect = 0.028
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQS 276
P G I ++ PM Q Q A AQ+ Q Q+ A AQ+ Q ++ A AQ+
Sbjct: 162 PDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 221
Query: 277 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQ------SDPTDVMQDQSIATAQSDPTD-- 328
Q ++ A AQ+ +Q + A Q S PT +++T+ S T
Sbjct: 222 QAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSS 281
Query: 329 ----VMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
S+A S PT Q S A + + PT
Sbjct: 282 TTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPT 316
>gi|46243671 G protein-coupled receptor 152 [Homo sapiens]
Length = 470
Score = 35.8 bits (81), Expect = 0.063
Identities = 39/113 (34%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQ--SDPTDVMQDQSIATAQSDPMDVMQDRSIATA 274
PT +A AQS V Q Q T Q SDPT Q A QSDP Q +A
Sbjct: 339 PTLPEPMAEAQSQMDPVAQPQVNPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQP 398
Query: 275 QSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPT 327
QSD S+A Q+D T+V A++ P D++ T S PT
Sbjct: 399 QSD--------SVAQPQAD-TNVQTPAPAASSVPSPC----DEASPTPSSHPT 438
Score = 35.0 bits (79), Expect = 0.11
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 233 VMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQS 292
V+ + A + P + S+ + + + A +Q DP Q +S
Sbjct: 309 VLSSFAAALCEERPGSFTPTEPQTQLDSEGPTLPEPMAEAQSQMDPVAQPQVNPTLQPRS 368
Query: 293 DPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIA 352
DPT Q A QSDPT Q +A QSD S+A Q+D T+V A
Sbjct: 369 DPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSD--------SVAQPQAD-TNVQTPAPAA 419
Query: 353 TAQSDPTD 360
++ P D
Sbjct: 420 SSVPSPCD 427
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 514 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 570
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 571 --QDALPED 577
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 514 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 570
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 571 --QDALPED 577
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 445 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 501
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 502 --QDALPED 508
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 445 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 501
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 502 --QDALPED 508
>gi|94721344 zinc finger, CW type with PWWP domain 1 [Homo sapiens]
Length = 648
Score = 33.5 bits (75), Expect = 0.31
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 47 CSAARVVGKSDGHPSYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLAR-AELECPQP- 104
C+ V +SD P ++ ATDT + G E T ++ W + P R ++L P P
Sbjct: 133 CAQPVVSTQSDKEPGITASATDTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPA 192
Query: 105 ---RTLQLHLLSKAQDALGKDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDG 161
+ LSK + + V+ +G Q +D + + + SQ+ Q G
Sbjct: 193 PSKKKSNRLTLSKRKKEAHEKVEKTQGGHEHRQ-EDRLKKTVQDHSQIRDQQKGEISGFG 251
Query: 162 EAAVWTISSCHGKGK 176
+ VW S GK
Sbjct: 252 QCLVWVQCSFPNCGK 266
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 32.3 bits (72), Expect = 0.70
Identities = 26/152 (17%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 199 KLSQKLSLDKN--LTGEVCFPTGKTSIATA--QSDPMDVMQDQSIATAQSDPTDVMQDQS 254
K K S D+N ++ F + K + +T+ + DP + + T +++P + +
Sbjct: 136 KTEPKSSDDRNPMFLEKMDFKSSKQADSTSIGKEDPGSSRKADPMFTGKAEPEILGKGDP 195
Query: 255 IATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVM 314
+A + DPM V ++ + + DP + +++ + DP + + +++ + DP
Sbjct: 196 VAPGRMDPMTVRKEDLGSLGKVDPLCSSKTYTVSPRKEDPGSLRKVDPVSSDKVDPVFPR 255
Query: 315 QDQSIATAQSDPTDVMQDRSIATAQSDPTDVM 346
+++ + + P + +A ++ D++
Sbjct: 256 KEEPRYSGKEHP---VSSEKVAPTSAEKVDLV 284
Score = 28.9 bits (63), Expect = 7.7
Identities = 18/122 (14%), Positives = 53/122 (43%)
Query: 237 QSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 296
+ +++ +++P + + D Q S + + DP + + T +++P
Sbjct: 130 EPVSSVKTEPKSSDDRNPMFLEKMDFKSSKQADSTSIGKEDPGSSRKADPMFTGKAEPEI 189
Query: 297 VMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 356
+ + +A + DP V ++ + + DP + +++ + DP + + +++ +
Sbjct: 190 LGKGDPVAPGRMDPMTVRKEDLGSLGKVDPLCSSKTYTVSPRKEDPGSLRKVDPVSSDKV 249
Query: 357 DP 358
DP
Sbjct: 250 DP 251
Score = 28.9 bits (63), Expect = 7.7
Identities = 23/157 (14%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 218 TGKTSIATAQS-DPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQS 276
+ KT + + ++ DPM + ++ + DP + + ++ Q++ + V + +++ +
Sbjct: 397 SAKTDLTSLKNVDPMSSGKVDPVSLGKMDPMCSGKPELLSPGQAERVSVGKAGTVSPGKE 456
Query: 277 DPTDVMQD-------RSIATAQSDPTDVMQDRSIATAQSDPTDV--------MQDQSIAT 321
DP ++ R ++ + +P + +++ DP + ++ +
Sbjct: 457 DPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATG 516
Query: 322 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDP 358
+ DP + +A+ ++ PT + +A + DP
Sbjct: 517 GKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKEDP 553
>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
Length = 2087
Score = 31.6 bits (70), Expect = 1.2
Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 199 KLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATA 258
K+ +KLS +++ + P T + S+ + + + + A S D ++ AT
Sbjct: 894 KIGRKLSKSPSMS--ISEPISVT-LPPRVSEVIGTVSNTTAQNASSSTWDKCVEERDATN 950
Query: 259 QSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQS 318
+S V + AQ +Q A+ +D+S++++QS Q Q+
Sbjct: 951 RSPTQIVKMKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQT 1010
Query: 319 IATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
A P D + S++ P R +A A ++ Q L P
Sbjct: 1011 GAVTHDPPQDSVPVSSVSLIPPPPPPKNVARMLALALAESAQQASTQSLKRP 1062
Score = 28.9 bits (63), Expect = 7.7
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPT 279
KT+ AQ +Q A+ +DQS++++QS + Q ++ A P
Sbjct: 960 KTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPPQ 1019
Query: 280 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSI---ATAQSDPTDVMQDRSIA 336
D + S++ P R +A A ++ QS+ T+Q+ T+ D ++A
Sbjct: 1020 DSVPVSSVSLIPPPPPPKNVARMLALALAESAQQASTQSLKRPGTSQAGYTN-YGDIAVA 1078
Query: 337 TAQSD 341
T + +
Sbjct: 1079 TTEDN 1083
>gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]
Length = 1738
Score = 31.6 bits (70), Expect = 1.2
Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 199 KLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATA 258
K+ +KLS +++ + P T + S+ + + + + A S D ++ AT
Sbjct: 545 KIGRKLSKSPSMS--ISEPISVT-LPPRVSEVIGTVSNTTAQNASSSTWDKCVEERDATN 601
Query: 259 QSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQS 318
+S V + AQ +Q A+ +D+S++++QS Q Q+
Sbjct: 602 RSPTQIVKMKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQT 661
Query: 319 IATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
A P D + S++ P R +A A ++ Q L P
Sbjct: 662 GAVTHDPPQDSVPVSSVSLIPPPPPPKNVARMLALALAESAQQASTQSLKRP 713
Score = 28.9 bits (63), Expect = 7.7
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPT 279
KT+ AQ +Q A+ +DQS++++QS + Q ++ A P
Sbjct: 611 KTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPPQ 670
Query: 280 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSI---ATAQSDPTDVMQDRSIA 336
D + S++ P R +A A ++ QS+ T+Q+ T+ D ++A
Sbjct: 671 DSVPVSSVSLIPPPPPPKNVARMLALALAESAQQASTQSLKRPGTSQAGYTN-YGDIAVA 729
Query: 337 TAQSD 341
T + +
Sbjct: 730 TTEDN 734
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 1.6
Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 191 TCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIAT--AQSDPTD 248
T + ++ + ++ + + + + C T KT TAQ+ P+ SIA+ AQ P++
Sbjct: 302 TLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSIASGVAQPPPSE 361
Query: 249 VMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 308
+ + + P+++ D S+ + SD + + + QS +D S+ + +
Sbjct: 362 LTMSEGAVVTITTPVNMNVD-SLQSLSSDGATLAVQQVMMAGQS------EDESVDSTEE 414
Query: 309 D 309
D
Sbjct: 415 D 415
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 30.8 bits (68), Expect = 2.0
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 218 TGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSD 277
T K T +P + +T +PT +I +A + P ++ + T +S
Sbjct: 204 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPT----TIKSAPTTP----KEPAPTTTKSA 255
Query: 278 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 337
PT + T + PT + T + PT +S T +P + T
Sbjct: 256 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT---KSAPTTPKEPAPTTPKKPAPT 312
Query: 338 AQSDPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
+P T +P ++ P
Sbjct: 313 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 345
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/143 (16%), Positives = 40/143 (27%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQS 276
PT K T +P + T +P + T +P T
Sbjct: 335 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 394
Query: 277 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIA 336
++ + T +S PT + T + PT + + PT +
Sbjct: 395 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 454
Query: 337 TAQSDPTDVMQDRSIATAQSDPT 359
+ PT + + PT
Sbjct: 455 PKEPAPTTTKKPAPTTPKEPAPT 477
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 30.8 bits (68), Expect = 2.0
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 218 TGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSD 277
T K T +P + +T +PT +I +A + P ++ + T +S
Sbjct: 245 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPT----TIKSAPTTP----KEPAPTTTKSA 296
Query: 278 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 337
PT + T + PT + T + PT +S T +P + T
Sbjct: 297 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT---KSAPTTPKEPAPTTPKKPAPT 353
Query: 338 AQSDPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
+P T +P ++ P
Sbjct: 354 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/143 (16%), Positives = 40/143 (27%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQS 276
PT K T +P + T +P + T +P T
Sbjct: 376 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 435
Query: 277 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIA 336
++ + T +S PT + T + PT + + PT +
Sbjct: 436 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 495
Query: 337 TAQSDPTDVMQDRSIATAQSDPT 359
+ PT + + PT
Sbjct: 496 PKEPAPTTTKKPAPTTPKEPAPT 518
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 30.8 bits (68), Expect = 2.0
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 218 TGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSD 277
T K T +P + +T +PT +I +A + P ++ + T +S
Sbjct: 297 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPT----TIKSAPTTP----KEPAPTTTKSA 348
Query: 278 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 337
PT + T + PT + T + PT +S T +P + T
Sbjct: 349 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT---KSAPTTPKEPAPTTPKKPAPT 405
Query: 338 AQSDPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
+P T +P ++ P
Sbjct: 406 TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 438
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/143 (16%), Positives = 40/143 (27%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQS 276
PT K T +P + T +P + T +P T
Sbjct: 428 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 487
Query: 277 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIA 336
++ + T +S PT + T + PT + + PT +
Sbjct: 488 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 547
Query: 337 TAQSDPTDVMQDRSIATAQSDPT 359
+ PT + + PT
Sbjct: 548 PKEPAPTTTKKPAPTTPKEPAPT 570
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.124 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,752,093
Number of Sequences: 37866
Number of extensions: 590615
Number of successful extensions: 1797
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 199
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.