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Search of human proteins with 239746046
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
(255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 529 e-151
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 529 e-151
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 55 6e-08
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 55 8e-08
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 53 2e-07
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 53 2e-07
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 51 9e-07
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 51 9e-07
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 51 9e-07
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ... 50 2e-06
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 49 4e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens] 49 4e-06
gi|19924097 synapsin I isoform Ib [Homo sapiens] 49 4e-06
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 49 6e-06
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 49 6e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 49 6e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 49 6e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 49 6e-06
gi|48762934 alpha 2 type I collagen [Homo sapiens] 48 9e-06
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 48 9e-06
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 48 9e-06
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 48 9e-06
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 48 9e-06
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 48 9e-06
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 48 9e-06
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 47 1e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 47 2e-05
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 529 bits (1363), Expect = e-151
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60
MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG
Sbjct: 1 MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60
Query: 61 GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120
GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR
Sbjct: 61 GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120
Query: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL
Sbjct: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
Query: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR
Sbjct: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
Query: 241 APARGARWLRPRRPR 255
APARGARWLRPRRPR
Sbjct: 241 APARGARWLRPRRPR 255
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 529 bits (1363), Expect = e-151
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60
MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG
Sbjct: 1 MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60
Query: 61 GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120
GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR
Sbjct: 61 GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120
Query: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL
Sbjct: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
Query: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR
Sbjct: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
Query: 241 APARGARWLRPRRPR 255
APARGARWLRPRRPR
Sbjct: 241 APARGARWLRPRRPR 255
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 55.1 bits (131), Expect = 6e-08
Identities = 72/274 (26%), Positives = 102/274 (37%), Gaps = 42/274 (15%)
Query: 22 GSQRVPQPPAARSPRGPR---AGGGGGDAGGGGAPVRR---ARGGGCWARAYQDARC-FG 74
G+Q+ +S G + A G + G P RR +RG ++A+ FG
Sbjct: 156 GAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFG 215
Query: 75 RGEGG-------------DLQVSSGPGAAPPAEFRASARSAQG--SRDVPAGPGFPPRLP 119
+ GG + G G P + R ++A G SR + G +L
Sbjct: 216 KTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLR 275
Query: 120 RPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179
R +A+ + R +A PA + R R GG PR RG A A
Sbjct: 276 RQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKA 335
Query: 180 LAARQAAGGGRSRSAFVAG---RDAALACAQLPRR---------PRGAGARRGMR--RRL 225
AA GGG + A V G R + PRR RG G ++G+R +R
Sbjct: 336 AAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRR 395
Query: 226 GAG------ERPAPRPRGPPRAPARGARWLRPRR 253
G G + P R + P A RG +PRR
Sbjct: 396 GDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRR 429
Score = 48.1 bits (113), Expect = 7e-06
Identities = 70/257 (27%), Positives = 94/257 (36%), Gaps = 52/257 (20%)
Query: 37 GPRAGGGGGDA---GGGG---------APVRRARGGGC----WARAYQDARCFGRGEGGD 80
G + GGGG+ GGGG A + RGGG W +A G+GG
Sbjct: 555 GATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGK 614
Query: 81 L---QVSSGPGAAPPAE-------FRASARSAQGSRDVPAGPGFP-PRLPRPFTSASFSN 129
Q ++G GA + A+A A + G G PR +P + S S+
Sbjct: 615 KAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESS 674
Query: 130 QTRLRRRSASALPAPRLCP--------QRASPGCSSPGVRGP---------GGGASPRAR 172
+ A A PR Q A+ G + RG GGGA R
Sbjct: 675 AAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGS 734
Query: 173 GGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPA 232
GG A + +GG +SRS A + RR G R + + AG + A
Sbjct: 735 GG------AKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKA 788
Query: 233 PRPRG--PPRAPARGAR 247
G PPR +RG R
Sbjct: 789 AAAGGKKPPRVKSRGGR 805
Score = 41.2 bits (95), Expect = 9e-04
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 23/215 (10%)
Query: 21 RGSQRVPQPPAA--RSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEG 78
RG+ + PAA R RGP++ GG G G R RG +A + A + G
Sbjct: 289 RGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRG----QKATKAAAAGTKRGG 344
Query: 79 GDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR--RR 136
G Q ++ G + R + + + AG S ++ LR +R
Sbjct: 345 GGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGA----------KSRGGGDKKGLREAKR 394
Query: 137 SASALPAPRLC-PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAF 195
PR P+R + + RG GG PR RG AA + + +GGG+
Sbjct: 395 RGDGRKKPRWQNPRRRAQKAPAAKPRG-GGSKKPRRRGPKAAKSRGGKSRSGGGKKPRR- 452
Query: 196 VAGRDAALACAQLPRRPRGAGARRGMRRRLGAGER 230
G+ A A+ RG ++G ++ AG +
Sbjct: 453 -RGQKARQKAAEAGAESRG-DKKQGRQKASAAGTK 485
Score = 40.4 bits (93), Expect = 0.002
Identities = 77/279 (27%), Positives = 97/279 (34%), Gaps = 69/279 (24%)
Query: 20 IRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARG----GG-------------- 61
+RG + AR AG GG + GGG A G GG
Sbjct: 73 LRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAA 132
Query: 62 ------CWARAYQDARCFGRGEGGDLQ-------VSSGPGAAPPAEFRASARSAQGSRDV 108
W RA + A + G Q V S G P A A+S G +
Sbjct: 133 TGSKKPRW-RAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPR 191
Query: 109 PAGP---GFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGG 165
G G + R + S +TR RR P P A+ G S GG
Sbjct: 192 RRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKP------AAGGAKS----RRGG 241
Query: 166 GASP---RARGGNAAAALAARQA-AGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221
G P R RG AA +R + GG + G++AAL AGA+R
Sbjct: 242 GKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAAL-----------AGAKR-- 288
Query: 222 RRRLGAGERPAPR---PRGPPRAPARGARWLR----PRR 253
R AGE+PA + RGP + RW R PRR
Sbjct: 289 RGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRR 327
Score = 38.5 bits (88), Expect = 0.006
Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 110 AGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAP-------RLCPQRASPGCSSPGVRG 162
AGPG P T + ++ SA+A +L Q+A+ G +RG
Sbjct: 16 AGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRG 75
Query: 163 PGGGASPRA----------------RGGNAAAALAARQAAGGGRSRSAFVAGRDAALACA 206
G + + RGG A AA + GGR R G+ AA +
Sbjct: 76 QKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGS 135
Query: 207 QLPRRPRGAGARRGMRRRLGAGERPAPRPRG--------PPRAPARGARWLRPRRPR 255
+ PR A G + R GAG + A G P +A A GA+ ++PR
Sbjct: 136 KKPRWRAQKSAAAGSKNR-GAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPR 191
Score = 32.3 bits (72), Expect = 0.41
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 27 PQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVSSG 86
P + PR ++ GGGG G + GG +R+ + A GG + G
Sbjct: 710 PWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRG 769
Query: 87 PGAAPPAEFRASARSAQGSRDVPAGPGFPPRL 118
GA + A +A G + AG PPR+
Sbjct: 770 GGA--KSRSGEKAVTAGGQKAAAAGGKKPPRV 799
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 54.7 bits (130), Expect = 8e-08
Identities = 71/256 (27%), Positives = 101/256 (39%), Gaps = 30/256 (11%)
Query: 10 PSLCTPRVQCIRGSQRVPQPPA----ARSPRG-PRAGGGGGDAGGGGAPVRRARGGGCWA 64
PS +PRV+ + + P PPA + SPR P + G GG A GG RR R +
Sbjct: 338 PSSPSPRVRD-KAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS 396
Query: 65 RAYQDA-RCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFT 123
R+ A R GR P APP S A+ S D +G G P P P +
Sbjct: 397 RSSASAPRRRGRRR---------PRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGS 447
Query: 124 SASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVR-GPGGGASPRARGGNAAAALAA 182
+ + PR P SP + G R GP G +S R+ G + + ++
Sbjct: 448 ERGHGGHGKRAKERP-----PRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502
Query: 183 RQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAP 242
R + +SRS R + + + P++P R R E R R +P
Sbjct: 503 RSPS---KSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSP 559
Query: 243 ARGAR-----WLRPRR 253
R R ++ PRR
Sbjct: 560 IRKRRRDSPSFMEPRR 575
Score = 39.7 bits (91), Expect = 0.003
Identities = 48/166 (28%), Positives = 54/166 (32%), Gaps = 42/166 (25%)
Query: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
P S+ +S+ R S R + S G SP G G SP+ GG+
Sbjct: 263 PSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGS----- 317
Query: 181 AARQAAGGGRSRSAFVAG----------RDAALACAQLP--------------------- 209
R A GGR SA RD A A A P
Sbjct: 318 GQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGG 377
Query: 210 RRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRRPR 255
R GAG RR RRR A PR RG R RP PR
Sbjct: 378 RAAGGAGRRRRRRRRRRRSRSSASAPR------RRGRRRPRPAPPR 417
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 53.1 bits (126), Expect = 2e-07
Identities = 67/220 (30%), Positives = 80/220 (36%), Gaps = 48/220 (21%)
Query: 37 GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQ-DARCFGRG-EGGDLQVSSGPGAAPPAE 94
G AG G+ GG R G Q AR GRG EGG L AA
Sbjct: 73 GKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAA---- 128
Query: 95 FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPG 154
R SR + P RP + R R ++AL +PR+ +P
Sbjct: 129 -----RRGGASRPLAGEPWREAARRRPQQCPQWG---RARESRSAALASPRVSNAPTTPA 180
Query: 155 CSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPR---- 210
+PG+R A R G R+AAGGG +R A+ PR
Sbjct: 181 SRNPGLR-----AQERQSG---------RRAAGGGGAR-------------AEPPRVPPC 213
Query: 211 RPRGAGARRGMRRRLGAGERPA---PRPRGPPRAPARGAR 247
RP G RR GAG R P PR P APA G R
Sbjct: 214 RPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLR 253
Score = 33.5 bits (75), Expect = 0.18
Identities = 64/217 (29%), Positives = 79/217 (36%), Gaps = 56/217 (25%)
Query: 81 LQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLP------RPFTSASFSNQTRLR 134
L SS AA P S+ SAQ ++ G PRLP R FT FS +
Sbjct: 22 LASSSSRSAAAP-----SSSSAQSGPEL--GLSLGPRLPSASSKLRVFTGY-FSVPHGVG 73
Query: 135 RRSASA--------LPAPRLCPQRASPGCSSPGVRG-----PGGGASPR-----ARGGNA 176
+ + +A L A R P G RG GGG R AR G A
Sbjct: 74 KSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGGA 133
Query: 177 AAALAA-----------RQAAGGGRSRSAFVAGRDAALACAQLPRRPRG---------AG 216
+ LA +Q GR+R + R AALA ++ P A
Sbjct: 134 SRPLAGEPWREAARRRPQQCPQWGRARES----RSAALASPRVSNAPTTPASRNPGLRAQ 189
Query: 217 ARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253
R+ RR G G A PR PP PA + R RR
Sbjct: 190 ERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRR 226
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 53.1 bits (126), Expect = 2e-07
Identities = 58/231 (25%), Positives = 82/231 (35%), Gaps = 47/231 (20%)
Query: 33 RSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVSSGPGAAPP 92
R+ G GGG G +GGGG G GG S G G +
Sbjct: 2288 RNHSGGGGGGGSGGSGGGG------------------------GSGGGGAPSGGSGHSGG 2323
Query: 93 AEFRASARSAQGSRDVPAGPGFPPRLPRP-------FTSASFSNQTRLRRRSASALPAPR 145
A S SR P R+P+P S++ S+Q + S ++ P P
Sbjct: 2324 PSSCGGAPSTSRSR--------PSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPS 2375
Query: 146 LCPQRASP--GCSSPGVRGPGGGASPRARGGNAAAAL----AARQAAGGGRSRSAFVAGR 199
L P A+P G S+P R PG A R + + R+ A S +
Sbjct: 2376 LPPPGAAPEAGPSAPSRRPPGADAEGSEREAEPIPKMKVLESPRKGAANASGSSPDAPAK 2435
Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPAR--GARW 248
DA + LP AGA + L + + PP +P + G+ W
Sbjct: 2436 DARASLGTLPLGKPRAGAASPLNSPLSSAVPSLGKEPFPPSSPLQKGGSFW 2486
Score = 35.8 bits (81), Expect = 0.037
Identities = 19/39 (48%), Positives = 21/39 (53%)
Query: 164 GGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAA 202
GG A+P A G AAAA AA GGG A A +D A
Sbjct: 6 GGAAAPAASSGPAAAASAAGSGCGGGAGEGAEEAAKDLA 44
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 51.2 bits (121), Expect = 9e-07
Identities = 64/241 (26%), Positives = 88/241 (36%), Gaps = 53/241 (21%)
Query: 10 PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
PSL +C R ++R PA PR+ GG+ G RR RGG ++
Sbjct: 209 PSLSPFPRRCRRRAER---SPAGHGLPLPRSLSRGGEVVGA----RRRRGG-------EE 254
Query: 70 ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
R GR +G A GS +PAGP P R +
Sbjct: 255 RRVRGRRQG----------------------CALGSPPIPAGPAAPGR----------AG 282
Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGG 189
+ R R+ P + P+ + G GVRG G +PRARG + + GG
Sbjct: 283 ERRAARQWRKRGGGPGVSPREGAQG---EGVRG---GVTPRARGSSTCLRPSPATWQGGA 336
Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP-RPRGPPRAPARGARW 248
R+ F AG + A+ P G A L + AP R P +PA +
Sbjct: 337 PYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHY 396
Query: 249 L 249
L
Sbjct: 397 L 397
Score = 43.1 bits (100), Expect = 2e-04
Identities = 70/294 (23%), Positives = 92/294 (31%), Gaps = 76/294 (25%)
Query: 10 PSLCTPRVQCIRGSQRVPQPPAAR------------------------------------ 33
P++C+P + PQ P R
Sbjct: 33 PAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTF 92
Query: 34 -------SPRGPRAGGGGGDAGG----------GGAPVRRARGGGCWARAYQDARCFGRG 76
+P PRA G G G G P AR R+ ARC R
Sbjct: 93 REASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSL--ARCLPRS 150
Query: 77 EGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRL---PRPFTSASFSNQTRL 133
G ++ S GP + P R R R +P P PRL P +A +
Sbjct: 151 VGSCVRPSVGP-SLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGS--- 206
Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRS 193
R+ S P PR C +RA R P G P R + + + GG R
Sbjct: 207 --RAPSLSPFPRRCRRRAE--------RSPAGHGLPLPRSLSRGGEVVGARRRRGGEERR 256
Query: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGAR 247
+ AL +P P G R G RR A + R GP +P GA+
Sbjct: 257 VRGRRQGCALGSPPIPAGPAAPG-RAGERR---AARQWRKRGGGPGVSPREGAQ 306
Score = 36.6 bits (83), Expect = 0.022
Identities = 51/175 (29%), Positives = 68/175 (38%), Gaps = 27/175 (15%)
Query: 86 GPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
G A PA +AR+ + P PP R + A+++ + ALP R
Sbjct: 27 GTDAPGPAVCSPTARAPP---PILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSR 83
Query: 146 ------LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
L + ASPG P GA PRARG + + G R R+ AG+
Sbjct: 84 RLGRVPLTFREASPG--------PAPGA-PRARG-------SCGREPGPRRRRAPSSAGK 127
Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRRP 254
A A P PR R + R +G+ RP+ P P R R R RRP
Sbjct: 128 RPAAAARAAP--PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRP 180
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 51.2 bits (121), Expect = 9e-07
Identities = 64/241 (26%), Positives = 88/241 (36%), Gaps = 53/241 (21%)
Query: 10 PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
PSL +C R ++R PA PR+ GG+ G RR RGG ++
Sbjct: 303 PSLSPFPRRCRRRAER---SPAGHGLPLPRSLSRGGEVVGA----RRRRGG-------EE 348
Query: 70 ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
R GR +G A GS +PAGP P R +
Sbjct: 349 RRVRGRRQG----------------------CALGSPPIPAGPAAPGR----------AG 376
Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGG 189
+ R R+ P + P+ + G GVRG G +PRARG + + GG
Sbjct: 377 ERRAARQWRKRGGGPGVSPREGAQG---EGVRG---GVTPRARGSSTCLRPSPATWQGGA 430
Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP-RPRGPPRAPARGARW 248
R+ F AG + A+ P G A L + AP R P +PA +
Sbjct: 431 PYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHY 490
Query: 249 L 249
L
Sbjct: 491 L 491
Score = 32.3 bits (72), Expect = 0.41
Identities = 65/254 (25%), Positives = 88/254 (34%), Gaps = 46/254 (18%)
Query: 27 PQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGR-----GEGGDL 81
P PP + + RG + G G P + W + ++ GR G
Sbjct: 112 PSPPVSGTRRG-KTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHP 170
Query: 82 QVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
Q P A PP R S R +G + A P S ++ + + +
Sbjct: 171 QSFRRPSAHPPG--RGSGRVPRGQPEQQAWEQRSSHFLAP--EGSVASLLPSAKPARAPR 226
Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
PAPR + A+ G RG GG P ARG LA R A A
Sbjct: 227 PAPRAREEAAA------GSRGRGGAERPAARGSAQQPPLA--------RLLLASAVSLAA 272
Query: 202 ALACAQLPRRPR------------GAGAR--------RGMRRRLGAGERPAPRPRGPPRA 241
+LA + P +PR AG+R R RRR A PA PR+
Sbjct: 273 SLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRR--AERSPAGHGLPLPRS 330
Query: 242 PARGARWLRPRRPR 255
+RG + RR R
Sbjct: 331 LSRGGEVVGARRRR 344
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 51.2 bits (121), Expect = 9e-07
Identities = 64/241 (26%), Positives = 88/241 (36%), Gaps = 53/241 (21%)
Query: 10 PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
PSL +C R ++R PA PR+ GG+ G RR RGG ++
Sbjct: 303 PSLSPFPRRCRRRAER---SPAGHGLPLPRSLSRGGEVVGA----RRRRGG-------EE 348
Query: 70 ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
R GR +G A GS +PAGP P R +
Sbjct: 349 RRVRGRRQG----------------------CALGSPPIPAGPAAPGR----------AG 376
Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGG 189
+ R R+ P + P+ + G GVRG G +PRARG + + GG
Sbjct: 377 ERRAARQWRKRGGGPGVSPREGAQG---EGVRG---GVTPRARGSSTCLRPSPATWQGGA 430
Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP-RPRGPPRAPARGARW 248
R+ F AG + A+ P G A L + AP R P +PA +
Sbjct: 431 PYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHY 490
Query: 249 L 249
L
Sbjct: 491 L 491
Score = 32.3 bits (72), Expect = 0.41
Identities = 65/254 (25%), Positives = 88/254 (34%), Gaps = 46/254 (18%)
Query: 27 PQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGR-----GEGGDL 81
P PP + + RG + G G P + W + ++ GR G
Sbjct: 112 PSPPVSGTRRG-KTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHP 170
Query: 82 QVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
Q P A PP R S R +G + A P S ++ + + +
Sbjct: 171 QSFRRPSAHPPG--RGSGRVPRGQPEQQAWEQRSSHFLAP--EGSVASLLPSAKPARAPR 226
Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
PAPR + A+ G RG GG P ARG LA R A A
Sbjct: 227 PAPRAREEAAA------GSRGRGGAERPAARGSAQQPPLA--------RLLLASAVSLAA 272
Query: 202 ALACAQLPRRPR------------GAGAR--------RGMRRRLGAGERPAPRPRGPPRA 241
+LA + P +PR AG+R R RRR A PA PR+
Sbjct: 273 SLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRR--AERSPAGHGLPLPRS 330
Query: 242 PARGARWLRPRRPR 255
+RG + RR R
Sbjct: 331 LSRGGEVVGARRRR 344
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 49.7 bits (117), Expect = 2e-06
Identities = 67/229 (29%), Positives = 85/229 (37%), Gaps = 34/229 (14%)
Query: 34 SPRGPRAGGGGGDAGGGGAPVRRARGGGC--WARAYQDARCFGRGEGGDLQVSSGPGAAP 91
S GPRAG GG R+ C R RC G G G G P
Sbjct: 159 SHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSW-----GGSGTPP 213
Query: 92 PAEF-------RASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR-----RRSAS 139
P A AR+ + A PG LP P + + TR R +R
Sbjct: 214 PPRALWNRHGGAAGARAQVRGSEKRACPG--STLP-PSSVLAGCVGTRARGHGGVQRQRF 270
Query: 140 ALPAPRLCPQRA--SPGCSSPGVRGPGGGASP-RARGGNAAAALAARQAAGGGRSRSAFV 196
+ P+ R +P + PG P G A P R RGG + L Q G GR
Sbjct: 271 SAPSSHSTGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLT--QLVGSGRGSGVTH 328
Query: 197 AGRDAALACAQLPRRPRGAGARRGMRRRLGAGERP--APRPRGPPRAPA 243
+ ALA + R PR G RG+ RP +P P+ PPR+P+
Sbjct: 329 SVGTHALATRRGSRAPRPVGVLRGVPH-----FRPLSSPAPQSPPRSPS 372
Score = 36.2 bits (82), Expect = 0.029
Identities = 59/204 (28%), Positives = 72/204 (35%), Gaps = 53/204 (25%)
Query: 22 GSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDL 81
G++ +P P AR G A G AP R RGGG + Q G G G +
Sbjct: 279 GARTLPTPSRARP---------GKPAPRGSAPPARLRGGGGGSGLTQ---LVGSGRGSGV 326
Query: 82 QVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
S G A A+ R ++ R V G P RP +S
Sbjct: 327 THSVGTHAL------ATRRGSRAPRPVGVLRGVPHF--RPLSS----------------- 361
Query: 142 PAPRLCPQRASPGCSSPGVR--GPGGGA-------SPRARGGNAAAALAARQAAGGGRSR 192
PAP+ P+ SP VR GP GA +PRA A LA A G R
Sbjct: 362 PAPQSPPR-------SPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQR 414
Query: 193 SAFVAGRDAALACAQLPRRPRGAG 216
G A + R RGAG
Sbjct: 415 CEGCGGGSQPFAGRRAERGKRGAG 438
>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 49.7 bits (117), Expect = 2e-06
Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 44/236 (18%)
Query: 21 RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
RGS R AR G RA G G AG GG + R+ ++A + A+
Sbjct: 16 RGSWRTRSRQEARPGGGSRARPGPG-AGPGGEVLGRSSSTPASSKASRTAQ--------- 65
Query: 81 LQVSSGPGAAPPAEFRASARSAQGSRDVPA-GPGFPPRLPRPFTSASFSNQTRLRRRSAS 139
++ ++ G+ P S+ S + V G G P+ P+ A +Q+ R +AS
Sbjct: 66 MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA-ERSAAS 124
Query: 140 ALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
+ P + C P C G ++ + + +AGGGR V+GR
Sbjct: 125 STPPEKTCAPGMKPWC------------------GERCSSSSRKPSAGGGRDGGVAVSGR 166
Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPP----RAPARGARWLRP 251
D A L R R+RLG G R R P P RW P
Sbjct: 167 DQPAARTMLAAR----------RQRLGPGRRELLMARSFPDPILARPELHGRWPGP 212
>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
sapiens]
Length = 261
Score = 49.7 bits (117), Expect = 2e-06
Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 44/236 (18%)
Query: 21 RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
RGS R AR G RA G G AG GG + R+ ++A + A+
Sbjct: 16 RGSWRTRSRQEARPGGGSRARPGPG-AGPGGEVLGRSSSTPASSKASRTAQ--------- 65
Query: 81 LQVSSGPGAAPPAEFRASARSAQGSRDVPA-GPGFPPRLPRPFTSASFSNQTRLRRRSAS 139
++ ++ G+ P S+ S + V G G P+ P+ A +Q+ R +AS
Sbjct: 66 MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA-ERSAAS 124
Query: 140 ALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
+ P + C P C G ++ + + +AGGGR V+GR
Sbjct: 125 STPPEKTCAPGMKPWC------------------GERCSSSSRKPSAGGGRDGGVAVSGR 166
Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPP----RAPARGARWLRP 251
D A L R R+RLG G R R P P RW P
Sbjct: 167 DQPAARTMLAAR----------RQRLGPGRRELLMARSFPDPILARPELHGRWPGP 212
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 48.9 bits (115), Expect = 4e-06
Identities = 62/195 (31%), Positives = 70/195 (35%), Gaps = 31/195 (15%)
Query: 28 QPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-VSSG 86
+ P G AGGGGG G GG +R G G AR A G GG+LQ
Sbjct: 24 EAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAG--ARRPIGA-APSVGPGGELQGWGRK 80
Query: 87 PGAAPPA-EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
G PP E A R + PPR F S QT +RRR A P+PR
Sbjct: 81 SGCRPPGPEGWAGGRKLR--------RWLPPRRFSNFCCRSPCAQTAVRRRRRRA-PSPR 131
Query: 146 LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALAC 205
R G G +P G AA G R R +GR
Sbjct: 132 GAGWREGAG---------AGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRP----- 177
Query: 206 AQLPRRPRGAGARRG 220
PRR RG GA G
Sbjct: 178 ---PRRGRGGGALGG 189
Score = 41.2 bits (95), Expect = 9e-04
Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)
Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
PA RL P+++S GPGGG A GG GGG GR A
Sbjct: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGG------------GGGLGS----GGRSA 50
Query: 202 ALACAQLPRRPRGAGARRGMRRRL-GAGERPAPRPRGPP--RAPARGARWLRPRR 253
RRP GA G L G G + RP GP + RWL PRR
Sbjct: 51 QRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRR 105
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 48.9 bits (115), Expect = 4e-06
Identities = 52/167 (31%), Positives = 66/167 (39%), Gaps = 31/167 (18%)
Query: 77 EGGDLQVSSGPGA-APPAEFRASARSAQGSRDV--PAGPGFPPRLPRPFTSASFSNQTRL 133
+GG Q GP PP + R + Q + PAG P RLP P
Sbjct: 464 QGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP------------ 511
Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRS 193
SA PA + P G S V G G GA P AR A+ RQA +R
Sbjct: 512 --TSAPQQPASQAAPPTQGQGRQSRPVAG-GPGAPPAARP--PASPSPQRQAGPPQATRQ 566
Query: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
V+G P P+ +GA G ++R G ++P P P GP R
Sbjct: 567 TSVSG----------PAPPKASGAPPGGQQRQGPPQKP-PGPAGPTR 602
Score = 36.6 bits (83), Expect = 0.022
Identities = 51/165 (30%), Positives = 58/165 (35%), Gaps = 22/165 (13%)
Query: 22 GSQRVPQPPAARSPRGPRAGGGGGDAGGG----GAPVRRARGGGCWARAYQDARCFGRGE 77
G Q QP + + P GG G G G P+++ + Q G
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP----PQGQQHLSGLGPPA 500
Query: 78 GGDL-QVSSGPGAAP--PAEFRASARSAQG--SRDVPAGPGFPPRL-----PRPFTSASF 127
G L Q P +AP PA A QG SR V GPG PP P P A
Sbjct: 501 GSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGP 560
Query: 128 SNQTRLRRRSASALP----APRLCPQRASPGCSSPGVRGPGGGAS 168
TR S A P AP QR P PG GP AS
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQAS 605
Score = 29.3 bits (64), Expect = 3.5
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 148 PQRASPGCSSPGVR-GPGGGASPRARGGNAAAALAA---RQAAGGGRSRSAFVAGRDAAL 203
P PG SPG GPG + R+ G AA+ AA + GGG S A +
Sbjct: 30 PPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGFFSSLSNAVKQTTA 89
Query: 204 ACAQLPRRPRGAGARRGMRRRLGAGER 230
A A G G+ G R GA R
Sbjct: 90 AAAATFSEQVGGGS--GGAGRGGAASR 114
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 48.9 bits (115), Expect = 4e-06
Identities = 52/167 (31%), Positives = 66/167 (39%), Gaps = 31/167 (18%)
Query: 77 EGGDLQVSSGPGA-APPAEFRASARSAQGSRDV--PAGPGFPPRLPRPFTSASFSNQTRL 133
+GG Q GP PP + R + Q + PAG P RLP P
Sbjct: 464 QGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP------------ 511
Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRS 193
SA PA + P G S V G G GA P AR A+ RQA +R
Sbjct: 512 --TSAPQQPASQAAPPTQGQGRQSRPVAG-GPGAPPAARP--PASPSPQRQAGPPQATRQ 566
Query: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
V+G P P+ +GA G ++R G ++P P P GP R
Sbjct: 567 TSVSG----------PAPPKASGAPPGGQQRQGPPQKP-PGPAGPTR 602
Score = 36.6 bits (83), Expect = 0.022
Identities = 51/165 (30%), Positives = 58/165 (35%), Gaps = 22/165 (13%)
Query: 22 GSQRVPQPPAARSPRGPRAGGGGGDAGGG----GAPVRRARGGGCWARAYQDARCFGRGE 77
G Q QP + + P GG G G G P+++ + Q G
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP----PQGQQHLSGLGPPA 500
Query: 78 GGDL-QVSSGPGAAP--PAEFRASARSAQG--SRDVPAGPGFPPRL-----PRPFTSASF 127
G L Q P +AP PA A QG SR V GPG PP P P A
Sbjct: 501 GSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGP 560
Query: 128 SNQTRLRRRSASALP----APRLCPQRASPGCSSPGVRGPGGGAS 168
TR S A P AP QR P PG GP AS
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQAS 605
Score = 29.3 bits (64), Expect = 3.5
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 148 PQRASPGCSSPGVR-GPGGGASPRARGGNAAAALAA---RQAAGGGRSRSAFVAGRDAAL 203
P PG SPG GPG + R+ G AA+ AA + GGG S A +
Sbjct: 30 PPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGFFSSLSNAVKQTTA 89
Query: 204 ACAQLPRRPRGAGARRGMRRRLGAGER 230
A A G G+ G R GA R
Sbjct: 90 AAAATFSEQVGGGS--GGAGRGGAASR 114
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 48.5 bits (114), Expect = 6e-06
Identities = 40/109 (36%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
P P LC R +PG + V G SP A A AL A G R R A G
Sbjct: 39 PRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGR-ATTRGEVQ 97
Query: 202 ALACAQLPRRP-RGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWL 249
L RP RG G RG R G G P P R PP P WL
Sbjct: 98 PSVRPPLSHRPLRGGGMGRG---RPGKGPPPNPSRRLPPAPPGGRRTWL 143
Score = 32.0 bits (71), Expect = 0.54
Identities = 52/199 (26%), Positives = 61/199 (30%), Gaps = 56/199 (28%)
Query: 10 PSLCTPRVQCIRGSQ------RVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRA------ 57
P LC PR R VP PPAA P P G G G R
Sbjct: 41 PPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSV 100
Query: 58 ---------RGGGCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAE--FRASARSAQGSR 106
RGGG GRG G + PPA R + SA +
Sbjct: 101 RPPLSHRPLRGGG-----------MGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATG 149
Query: 107 DVPAGPGFPPRLPRPFTSA--------------------SFSNQTRLRRRSASALPAPRL 146
G G R P F +A + S++ RRS + PR
Sbjct: 150 PAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRG 209
Query: 147 CPQRASPGC--SSPGVRGP 163
P RA+P SP GP
Sbjct: 210 LPLRATPESFKGSPDCTGP 228
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 48.5 bits (114), Expect = 6e-06
Identities = 75/273 (27%), Positives = 99/273 (36%), Gaps = 41/273 (15%)
Query: 10 PSLCTPRVQCIR-GSQRVPQPPAARSPRGPRAGG----GGGDAGGGGAPV---------- 54
P C+ + R G P P A + R PR G DAGG G P+
Sbjct: 200 PEACSSAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRR 259
Query: 55 RRARGGGCWARAYQDARCFGRGEGGDLQVSS----GPGAAPPAEFRASARSAQGSRDVPA 110
RR RG G Q G +GG + +S P A+P AR R V
Sbjct: 260 RRRRGAG------QPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLER-VGG 312
Query: 111 GPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPR 170
P P L R + S S+ ++ + A P+P P + G PG A+ R
Sbjct: 313 HPTSPAALSRAWAS-SWESEAAPEPAAPPAAPSP---PDSPAEGRLVKAQYIPGAQAATR 368
Query: 171 ARGGNAAA--------ALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMR 222
G AA + Q+ R R+A GR A + + R R A +
Sbjct: 369 GLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSET 428
Query: 223 RRLGAGERPAPRPRGPPRAPARGARWLRPRRPR 255
LG R + P GPP+ P RP RPR
Sbjct: 429 SLLG---RASAVPSGPPKYPTAEREEPRPPRPR 458
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 48.5 bits (114), Expect = 6e-06
Identities = 60/208 (28%), Positives = 77/208 (37%), Gaps = 37/208 (17%)
Query: 30 PAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCW---ARAYQDARCFGRGEGGDLQVSS- 85
P A G GGGGG GGGG A G G A A A G G GG SS
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
Query: 86 -----------------GPGAAPPAEF-RASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
GPG A +A+A SA G AG P P +
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAG 187
++ + + R + P+ +SP S+P P + P+++ A AA +QAA
Sbjct: 366 TSPSPMMRSYGGSY------PEYSSP--SAP----PPPPSQPQSQAAAAGAAAGGQQAAA 413
Query: 188 G---GRSRSAFVAGRDAALACAQLPRRP 212
G G+ A A A A AQ P
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHP 441
Score = 35.4 bits (80), Expect = 0.049
Identities = 64/242 (26%), Positives = 75/242 (30%), Gaps = 45/242 (18%)
Query: 27 PQP-PAARSPR--GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQV 83
PQP P P+ G + GG A G P+ G A GR E L
Sbjct: 90 PQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGA 149
Query: 84 -------------SSGPGAAPPAE-FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
GP A P + SA A G AGP F
Sbjct: 150 LGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH-----GGQQSPG 204
Query: 130 QTRLRRRSASALPAP-RLCPQRAS------------PGCSSPGVRGPGGGASPRARGGNA 176
+ SA+A AP + P + S PG S PG G GGG GG
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG----GGGG 260
Query: 177 AAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM-RRRLGAGERPAPRP 235
+ GGG A AG A A A G G G G G +PR
Sbjct: 261 GSG-----GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 236 RG 237
+G
Sbjct: 316 QG 317
Score = 30.8 bits (68), Expect = 1.2
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 84 SSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPA 143
SS + PA+ S ++ +P GP P P S SNQ+R S +++P
Sbjct: 649 SSQGDQSNPAQSPFSPHASPHLSSIPGGPS-----PSPVGSPVGSNQSRSGPISPASIPG 703
Query: 144 PRLCPQRASPGCSSPGVRGPGGGASP 169
++ PQ PG S P SP
Sbjct: 704 SQMPPQ--PPGSQSESSSHPALSQSP 727
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 48.5 bits (114), Expect = 6e-06
Identities = 60/208 (28%), Positives = 77/208 (37%), Gaps = 37/208 (17%)
Query: 30 PAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCW---ARAYQDARCFGRGEGGDLQVSS- 85
P A G GGGGG GGGG A G G A A A G G GG SS
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
Query: 86 -----------------GPGAAPPAEF-RASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
GPG A +A+A SA G AG P P +
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAG 187
++ + + R + P+ +SP S+P P + P+++ A AA +QAA
Sbjct: 366 TSPSPMMRSYGGSY------PEYSSP--SAP----PPPPSQPQSQAAAAGAAAGGQQAAA 413
Query: 188 G---GRSRSAFVAGRDAALACAQLPRRP 212
G G+ A A A A AQ P
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHP 441
Score = 35.4 bits (80), Expect = 0.049
Identities = 64/242 (26%), Positives = 75/242 (30%), Gaps = 45/242 (18%)
Query: 27 PQP-PAARSPR--GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQV 83
PQP P P+ G + GG A G P+ G A GR E L
Sbjct: 90 PQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGA 149
Query: 84 -------------SSGPGAAPPAE-FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
GP A P + SA A G AGP F
Sbjct: 150 LGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH-----GGQQSPG 204
Query: 130 QTRLRRRSASALPAP-RLCPQRAS------------PGCSSPGVRGPGGGASPRARGGNA 176
+ SA+A AP + P + S PG S PG G GGG GG
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG----GGGG 260
Query: 177 AAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM-RRRLGAGERPAPRP 235
+ GGG A AG A A A G G G G G +PR
Sbjct: 261 GSG-----GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 236 RG 237
+G
Sbjct: 316 QG 317
Score = 30.8 bits (68), Expect = 1.2
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 84 SSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPA 143
SS + PA+ S ++ +P GP P P S SNQ+R S +++P
Sbjct: 636 SSQGDQSNPAQSPFSPHASPHLSSIPGGPS-----PSPVGSPVGSNQSRSGPISPASIPG 690
Query: 144 PRLCPQRASPGCSSPGVRGPGGGASP 169
++ PQ PG S P SP
Sbjct: 691 SQMPPQ--PPGSQSESSSHPALSQSP 714
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 48.5 bits (114), Expect = 6e-06
Identities = 60/208 (28%), Positives = 77/208 (37%), Gaps = 37/208 (17%)
Query: 30 PAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCW---ARAYQDARCFGRGEGGDLQVSS- 85
P A G GGGGG GGGG A G G A A A G G GG SS
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
Query: 86 -----------------GPGAAPPAEF-RASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
GPG A +A+A SA G AG P P +
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAG 187
++ + + R + P+ +SP S+P P + P+++ A AA +QAA
Sbjct: 366 TSPSPMMRSYGGSY------PEYSSP--SAP----PPPPSQPQSQAAAAGAAAGGQQAAA 413
Query: 188 G---GRSRSAFVAGRDAALACAQLPRRP 212
G G+ A A A A AQ P
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHP 441
Score = 35.4 bits (80), Expect = 0.049
Identities = 64/242 (26%), Positives = 75/242 (30%), Gaps = 45/242 (18%)
Query: 27 PQP-PAARSPR--GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQV 83
PQP P P+ G + GG A G P+ G A GR E L
Sbjct: 90 PQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGA 149
Query: 84 -------------SSGPGAAPPAE-FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
GP A P + SA A G AGP F
Sbjct: 150 LGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH-----GGQQSPG 204
Query: 130 QTRLRRRSASALPAP-RLCPQRAS------------PGCSSPGVRGPGGGASPRARGGNA 176
+ SA+A AP + P + S PG S PG G GGG GG
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG----GGGG 260
Query: 177 AAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM-RRRLGAGERPAPRP 235
+ GGG A AG A A A G G G G G +PR
Sbjct: 261 GSG-----GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
Query: 236 RG 237
+G
Sbjct: 316 QG 317
Score = 30.8 bits (68), Expect = 1.2
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 84 SSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPA 143
SS + PA+ S ++ +P GP P P S SNQ+R S +++P
Sbjct: 636 SSQGDQSNPAQSPFSPHASPHLSSIPGGPS-----PSPVGSPVGSNQSRSGPISPASIPG 690
Query: 144 PRLCPQRASPGCSSPGVRGPGGGASP 169
++ PQ PG S P SP
Sbjct: 691 SQMPPQ--PPGSQSESSSHPALSQSP 714
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 47.8 bits (112), Expect = 9e-06
Identities = 70/238 (29%), Positives = 82/238 (34%), Gaps = 19/238 (7%)
Query: 21 RGSQRVPQPPAARS------PRGPRAG-GGGGDAGGGGAPVRRARGGGCWARAYQDARCF 73
RG P P AR P GP G G G GAP + G A
Sbjct: 222 RGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAV-GNAGPAGPAG 280
Query: 74 GRGEGG--DLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFP-PR-LPRPFTSASFSN 129
RGE G L GP P A A+ A G V PG P PR +P P +A +
Sbjct: 281 PRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATG 340
Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSP-GVRGPGGGASPRARGGNAAAALAARQAAGG 188
L A + + PG + P G GP G R G A +A
Sbjct: 341 ARGLVGEPGPA-GSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLR 399
Query: 189 GRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP----RPRGPPRAP 242
G S + G D A P RGA G+R G RP PRG P +P
Sbjct: 400 GSPGSRGLPGADGR-AGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSP 456
Score = 37.4 bits (85), Expect = 0.013
Identities = 62/248 (25%), Positives = 73/248 (29%), Gaps = 43/248 (17%)
Query: 22 GSQRVPQPPAARSPRGPR-AGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
G+ P P A RG A G G AG G+P R G +
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP---------- 728
Query: 81 LQVSSGPGAAPPAEFRASARSAQGSRDV-----------PAGPGFPPRLPRPFTSASFSN 129
+G P A+ A+ +G V PAGP PP
Sbjct: 729 ----AGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPG 784
Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSP----GVRGPGGGASPRARGGNAAAALAARQA 185
T + P P PG P G+RGP G P R G A A
Sbjct: 785 MTGFPGAAGRTGP-PGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFA 843
Query: 186 AGGGRSRSAFVAGRDAALACAQLPRRP-----RGAGARRGMRRRLGAGERPA-------P 233
G S A AG L P G+ RG+ GA P P
Sbjct: 844 GEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPP 903
Query: 234 RPRGPPRA 241
RGPP A
Sbjct: 904 GARGPPGA 911
Score = 35.0 bits (79), Expect = 0.063
Identities = 59/230 (25%), Positives = 72/230 (31%), Gaps = 45/230 (19%)
Query: 29 PPAARSPRGPRAG-GGGGDAGGGGAPVRRARGG-----------GCWARAYQDARCFGRG 76
P P GP G GG G G P R G G A ++ RG
Sbjct: 764 PAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRG 823
Query: 77 EGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRR 136
+ G + + GA P F A + G AG PP P P Q L
Sbjct: 824 DQGPVGRTGEVGAVGPPGF-AGEKGPSGE----AGTAGPPGTPGP--------QGLLGAP 870
Query: 137 SASALPAPRLCPQRASPGCSSP-------GVRGPGGGASPRARGGNAAAALAARQAAGGG 189
LP R +R PG + G+ GP G P G+ A +A G
Sbjct: 871 GILGLPGSR--GERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928
Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLG-AGERPAPRPRGP 238
+ GRD G RG +G G AP P GP
Sbjct: 929 NPGNDGPPGRDG----------QPGHKGERGYPGNIGPVGAAGAPGPHGP 968
Score = 34.7 bits (78), Expect = 0.083
Identities = 61/241 (25%), Positives = 74/241 (30%), Gaps = 40/241 (16%)
Query: 21 RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG--GCWARAYQDARCFGRGEG 78
RG + P A P GP G G +G G + G G A GE
Sbjct: 588 RGERGPPGESGAAGPTGPI--GSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGER 645
Query: 79 GDLQVSSGPGAAPPAEFRASARSA--QGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRR 136
G + G G R + G+R P G P + T R
Sbjct: 646 GAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGP----------AGATGDRGE 695
Query: 137 SASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA----LAARQAAGGGRSR 192
+ +A PA P+ SPG RG G A P G A AA + A G +
Sbjct: 696 AGAAGPAGPAGPR------GSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGE 749
Query: 193 SAFVAGRDAALACAQL-------PRRPRGAGARRGMRRRLGAGERPAP-------RPRGP 238
+ V A P RG G GM GA R P P GP
Sbjct: 750 NGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGP 809
Query: 239 P 239
P
Sbjct: 810 P 810
Score = 33.9 bits (76), Expect = 0.14
Identities = 62/233 (26%), Positives = 75/233 (32%), Gaps = 19/233 (8%)
Query: 22 GSQRVPQPPAARSPRGPRA-GGGGGDAGGGGAPVRRARGGGCWARAYQ-DARCFGR---- 75
GS P PP R G R G G AG G P R G R DA G
Sbjct: 388 GSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLM 447
Query: 76 ------GEGGDLQVSS--GPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
G G++ + GP P + R G+R P GFP P+ T
Sbjct: 448 GPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPG--PKGPTGDPG 505
Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSP-GVRGPGGGASPRARGGNAAAALAARQAA 186
N + A A AP + G P GV+G G P G + A
Sbjct: 506 KNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAG 565
Query: 187 GGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLG-AGERPAPRPRGP 238
G+ + G + L PR RG G G G R P GP
Sbjct: 566 EVGKPGERGLHG-EFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGP 617
Score = 30.0 bits (66), Expect = 2.0
Identities = 64/275 (23%), Positives = 80/275 (29%), Gaps = 45/275 (16%)
Query: 11 SLCTPRVQCIRGSQRVPQPPAARSPRGPRA----------GGGGGDAGGGGAPVRRARGG 60
+LC Q ++ P R PRG R G G G G P GG
Sbjct: 16 TLCLATCQSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGG 75
Query: 61 GCWARAYQDARCFGRGEGGDLQVSSGPGAA----------PPAEFRASARSAQGSRDVPA 110
A+ G G G + PGAA P E ++ PA
Sbjct: 76 NFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPA 135
Query: 111 GP-------GFPPRLPRPFTSASFSNQTRLRRRSASALPAPR-------LCPQRASPGCS 156
GP G P + RP Q LP + L + PG
Sbjct: 136 GPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPG-- 193
Query: 157 SPGVRG----PGGGASPRARGGNAAAALAARQAAGG-----GRSRSAFVAGRDAALACAQ 207
+PGV+G PG +P G R A G G S G + A
Sbjct: 194 APGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAG 253
Query: 208 LPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAP 242
P P G + + AG PRG P
Sbjct: 254 PPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLP 288
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 47.8 bits (112), Expect = 9e-06
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 114 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 167
Query: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
GG S+G P A R R S G + A P P R + F
Sbjct: 168 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220
Query: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280
Query: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340
Query: 233 PRPRGPPRAPARGARW 248
PRAP G+ W
Sbjct: 341 ------PRAPDAGSFW 350
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 47.8 bits (112), Expect = 9e-06
Identities = 61/199 (30%), Positives = 78/199 (39%), Gaps = 34/199 (17%)
Query: 22 GSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPV---RRARGGGCWARAYQDA-------- 70
G++R PP P A G + G G P+ R+ G ARA + A
Sbjct: 47 GARRGHSPPTV----APAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAG 102
Query: 71 ---RCFGRGEGGDLQVSSGPGAA--PPAEFR----ASARSAQGSRDVPAGPGFPPRLPRP 121
R GRG + S PG A PA A+A S+ G+R VPA RLP P
Sbjct: 103 PPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPA-----RRLPPP 157
Query: 122 FTSASFSNQTR-LRRRSASALP----APRLCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
S +R LRR ++ALP + R PG PG G A A
Sbjct: 158 CGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAA 217
Query: 177 AAALAARQAAGGGRSRSAF 195
AA++A A G +AF
Sbjct: 218 AASVAPPPPAVAGAPAAAF 236
Score = 32.0 bits (71), Expect = 0.54
Identities = 39/134 (29%), Positives = 47/134 (35%), Gaps = 29/134 (21%)
Query: 144 PRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA--LAARQAAGGGRSRSAFVAGRDA 201
P + P ++ PG GP + A G A A A R+A G A GR A
Sbjct: 55 PTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGRGRAA 114
Query: 202 ALACAQLPRRPRG----------------AGARRGMRRR---------LGAGERPAPRPR 236
A + P RG AG R RR LGAG R RP
Sbjct: 115 ATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPG 174
Query: 237 GP--PRAPARGARW 248
PR+P+ RW
Sbjct: 175 SAALPRSPSSSRRW 188
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 47.8 bits (112), Expect = 9e-06
Identities = 74/242 (30%), Positives = 87/242 (35%), Gaps = 73/242 (30%)
Query: 32 ARSPRG-------PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVS 84
+RSPRG PRA G GG AGGGG R RG C G G G +
Sbjct: 76 SRSPRGAGPGAAGPRAAGRGG-AGGGGRCCTRGRGR---------FPCAGSGGRG----A 121
Query: 85 SGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSAS--ALP 142
G P+ R+S S ++ +LR R A A P
Sbjct: 122 RSRGCHSPSCCRSS-------------------------SCAWHRWPQLRGREAEPRASP 156
Query: 143 APRLC----PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAG 198
A +C P+ A P G R G A+ RA+ +A AAR G R+R
Sbjct: 157 ALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR----GRRTR------ 206
Query: 199 RDAALACAQLPRRPRGAGARRGMRRRLGA------GERPAPRPRGPPRAPARGARWLRPR 252
A P RPR G R G R GA G R A G R P R R L P
Sbjct: 207 -----ASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPI 261
Query: 253 RP 254
P
Sbjct: 262 HP 263
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 47.8 bits (112), Expect = 9e-06
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 114 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 167
Query: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
GG S+G P A R R S G + A P P R + F
Sbjct: 168 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220
Query: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280
Query: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340
Query: 233 PRPRGPPRAPARGARW 248
PRAP G+ W
Sbjct: 341 ------PRAPDAGSFW 350
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 47.8 bits (112), Expect = 9e-06
Identities = 74/242 (30%), Positives = 87/242 (35%), Gaps = 73/242 (30%)
Query: 32 ARSPRG-------PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVS 84
+RSPRG PRA G GG AGGGG R RG C G G G +
Sbjct: 76 SRSPRGAGPGAAGPRAAGRGG-AGGGGRCCTRGRGR---------FPCAGSGGRG----A 121
Query: 85 SGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSAS--ALP 142
G P+ R+S S ++ +LR R A A P
Sbjct: 122 RSRGCHSPSCCRSS-------------------------SCAWHRWPQLRGREAEPRASP 156
Query: 143 APRLC----PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAG 198
A +C P+ A P G R G A+ RA+ +A AAR G R+R
Sbjct: 157 ALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR----GRRTR------ 206
Query: 199 RDAALACAQLPRRPRGAGARRGMRRRLGA------GERPAPRPRGPPRAPARGARWLRPR 252
A P RPR G R G R GA G R A G R P R R L P
Sbjct: 207 -----ASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPI 261
Query: 253 RP 254
P
Sbjct: 262 HP 263
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 47.8 bits (112), Expect = 9e-06
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 151 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 204
Query: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
GG S+G P A R R S G + A P P R + F
Sbjct: 205 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 257
Query: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 258 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 317
Query: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 318 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 377
Query: 233 PRPRGPPRAPARGARW 248
PRAP G+ W
Sbjct: 378 ------PRAPDAGSFW 387
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 47.4 bits (111), Expect = 1e-05
Identities = 69/229 (30%), Positives = 80/229 (34%), Gaps = 55/229 (24%)
Query: 28 QPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-VSSG 86
+ P G AGGGGG G GG +R G G AR A G GG+LQ
Sbjct: 24 EAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAG--ARRPIGA-APSVGPGGELQGWGRK 80
Query: 87 PGAAPPA-EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
G PP E A R + PPR F S QT +RRR
Sbjct: 81 SGCRPPGPEGWAGGRKLR--------RWLPPRRFSNFCCRSPCAQTAVRRR--------- 123
Query: 146 LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALAC 205
+R +P SPR G R+ AG GR A +AG + A
Sbjct: 124 ---RRRAP--------------SPRGAGW--------REGAGAGRGTPATMAGGEWAAEP 158
Query: 206 AQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRRP 254
LP+R R A L ER A R R R R L P P
Sbjct: 159 LHLPQRGRPA--------PLHLPEREATEARPRRRRARRRLRVLEPHPP 199
Score = 41.2 bits (95), Expect = 9e-04
Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)
Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
PA RL P+++S GPGGG A GG GGG GR A
Sbjct: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGG------------GGGLGS----GGRSA 50
Query: 202 ALACAQLPRRPRGAGARRGMRRRL-GAGERPAPRPRGPP--RAPARGARWLRPRR 253
RRP GA G L G G + RP GP + RWL PRR
Sbjct: 51 QRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRR 105
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 47.4 bits (111), Expect = 1e-05
Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 34/135 (25%)
Query: 120 RPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179
R T+A R R ++AL +PR+ +P +PG+R A R G
Sbjct: 75 RAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLR-----AQERQSG------ 123
Query: 180 LAARQAAGGGRSRSAFVAGRDAALACAQLPR----RPRGAGARRGMRRRLGAGERPA--- 232
R+AAGGG +R A+ PR RP G RR GAG R
Sbjct: 124 ---RRAAGGGGAR-------------AEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167
Query: 233 PRPRGPPRAPARGAR 247
P PR P APA G R
Sbjct: 168 PPPRPPGTAPAAGLR 182
Score = 37.4 bits (85), Expect = 0.013
Identities = 39/122 (31%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 141 LPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200
L A R P G P V GGG G A A+ A + GR+R + R
Sbjct: 40 LQATRTWPAGILEG--GPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRARES----RS 93
Query: 201 AALACAQLPRRPRG---------AGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRP 251
AALA ++ P A R+ RR G G A PR PP PA + R
Sbjct: 94 AALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRS 153
Query: 252 RR 253
RR
Sbjct: 154 RR 155
Score = 35.0 bits (79), Expect = 0.063
Identities = 42/133 (31%), Positives = 52/133 (39%), Gaps = 13/133 (9%)
Query: 30 PAARSPRGPR--AGGGGGDAGGGGAPVRR---ARGGGCWARAYQDARCFGRGEGGDLQVS 84
PA GP+ A GGG GGG RR A G W RA +++R
Sbjct: 47 PAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRA-RESRSAALASPRVSNAP 105
Query: 85 SGPGAAPP---AEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
+ P + P A+ R S R A G A PPR+P P A S R RR + +
Sbjct: 106 TTPASRNPGLRAQERQSGRRAAGGGGARAE---PPRVP-PCRPAGCSGGNRSRRAAGAGP 161
Query: 142 PAPRLCPQRASPG 154
R P PG
Sbjct: 162 RTTRRKPPPRPPG 174
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 47.0 bits (110), Expect = 2e-05
Identities = 62/235 (26%), Positives = 79/235 (33%), Gaps = 17/235 (7%)
Query: 14 TPRVQCIRGSQRVPQPPAARSPRGPRAGGG-GGDAGGGGAPVRRARGGGCWARAYQDARC 72
+P Q ++G P RGP G G AG G P R G +D
Sbjct: 970 SPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPG-RDGSP 1028
Query: 73 FGRGEGGDLQVSSGPGA----APPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFS 128
G+G+ G+ PGA PP + +S PAGP P P A
Sbjct: 1029 GGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPG-PAGSRGAPGP 1087
Query: 129 NQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGG 188
R + A + R PG +PG G G A + G+ A
Sbjct: 1088 QGPRGDKGETGERGAAGIKGHRGFPG--NPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPS 1145
Query: 189 GRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPA-PRPRGPPRAP 242
G +G + P PRG RG R G+ P P P GPP AP
Sbjct: 1146 GPPGKDGTSGHPGPIG----PPGPRG---NRGERGSEGSPGHPGQPGPPGPPGAP 1193
Score = 46.6 bits (109), Expect = 2e-05
Identities = 66/250 (26%), Positives = 82/250 (32%), Gaps = 56/250 (22%)
Query: 10 PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
P + PR + P PA P P G G G GAP
Sbjct: 788 PGIAGPRGSPGERGETGPPGPAG-FPGAPGQNGEPGGKGERGAPGE-------------- 832
Query: 70 ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGP---GFPPRLPRPFTSAS 126
+GEGG V+ PG + PA + +G R P GP GFP P S
Sbjct: 833 -----KGEGGPPGVAGPPGGSGPAG-PPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGS 886
Query: 127 FSNQTRLRRRSASALPAPRLCPQRASP--------GCSSPGVRGPGGGASPRARGGNAAA 178
N P P P + P SPGV GP G A G+ A
Sbjct: 887 NGN---------PGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937
Query: 179 ALAARQAAGGGRSRSAFVAGRDAALACAQLPRR--PRGAGARRGMRRRLG-------AGE 229
G +AG A A P PRG+ +G++ G +GE
Sbjct: 938 ------QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGE 991
Query: 230 RPAPRPRGPP 239
R P P+G P
Sbjct: 992 RGPPGPQGLP 1001
Score = 45.4 bits (106), Expect = 5e-05
Identities = 61/237 (25%), Positives = 74/237 (31%), Gaps = 46/237 (19%)
Query: 21 RGSQRVPQPPAARSPRG-PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGG 79
RGS P PP G P + G G+ G G+P G Q +G G
Sbjct: 326 RGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG-------QRGEPGPQGHAG 378
Query: 80 DLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR----- 134
+ GP P + G +P PG P A + LR
Sbjct: 379 ----AQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPP-GPAGANGAPGLRGGAGE 433
Query: 135 --RRSASALPAPRLCPQRASPGCSS-PGVRGPGG-GASPRARGGNAAAALAARQAAGGGR 190
+ A P PR +R G PG +G G SP G N A + A G R
Sbjct: 434 PGKNGAKGEPGPR--GERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFR 491
Query: 191 SRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGAR 247
P P G +G AGER AP P GP A R
Sbjct: 492 G-----------------PAGPNGIPGEKGP-----AGERGAPGPAGPRGAAGEPGR 526
Score = 42.4 bits (98), Expect = 4e-04
Identities = 62/231 (26%), Positives = 75/231 (32%), Gaps = 46/231 (19%)
Query: 22 GSQRVPQPPAARSPRGPRA----GGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGE 77
G+ VP R P GP G GD G GGAP G RG
Sbjct: 750 GADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGP-------------RGS 796
Query: 78 GGDLQVSSGPGAA--PPAEFRASARSAQGSRDVPA--GPGFPPRLPRPFTSASFSNQTRL 133
G+ + PG A P A + +G R P G G PP + P
Sbjct: 797 PGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGP------------ 844
Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGG--GRS 191
+ PA PQ SPG GPG P ARG L + G G
Sbjct: 845 ---PGGSGPAGPPGPQGVKGERGSPG--GPGAAGFPGARG------LPGPPGSNGNPGPP 893
Query: 192 RSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAP 242
+ G+D A P G GE+ +P +GPP AP
Sbjct: 894 GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAP 944
Score = 40.4 bits (93), Expect = 0.002
Identities = 64/241 (26%), Positives = 74/241 (30%), Gaps = 39/241 (16%)
Query: 27 PQPPAA--RSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-V 83
PQPP A R P G G GD G G P R G Q G G +
Sbjct: 89 PQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPG----IPGQPGSPGSPGPPGICESC 144
Query: 84 SSGPGAAPPA--EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
+GP P + + A G GP PP P P S
Sbjct: 145 PTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP--------------PGTSGH 190
Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
P P P PG GP G P G + A ++ GR + G
Sbjct: 191 PGSPGSPGYQGPP-GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPG 249
Query: 202 ALACAQLPRRP-----RGAGARRGMRRRLGA----------GERPAPRPRGPPRAPARGA 246
A +P P RG R G + GA GE AP P GP AP
Sbjct: 250 IKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERG 309
Query: 247 R 247
R
Sbjct: 310 R 310
Score = 38.9 bits (89), Expect = 0.004
Identities = 66/233 (28%), Positives = 72/233 (30%), Gaps = 39/233 (16%)
Query: 29 PPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCF-----GRGEGGDLQV 83
PP P P G G G G R GG A + AR G G
Sbjct: 838 PPGVAGP--PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGP 895
Query: 84 SSGPGA-APPAEFRASARSAQGSRDV--PAG----------PGF--PPRLPRPFTSASFS 128
S PG PP A A GS V P G PG PP P P A +
Sbjct: 896 SGSPGKDGPPGP--AGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGIT 953
Query: 129 NQTRLRRRSASALPAPRLC--PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAA 186
L +P PR PQ PG G G P G A A +
Sbjct: 954 GARGL--AGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG 1011
Query: 187 GGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPA-PRPRGP 238
G S + GRD + P G G RG GA P P P GP
Sbjct: 1012 RDGNPGSDGLPGRDGS---------PGGKG-DRGENGSPGAPGAPGHPGPPGP 1054
Score = 35.0 bits (79), Expect = 0.063
Identities = 64/249 (25%), Positives = 79/249 (31%), Gaps = 36/249 (14%)
Query: 2 PFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGG 61
P ++ Q+ S + G P P P GP G G G G+P
Sbjct: 148 PQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPP--GTSGHPGSPGSP-------- 197
Query: 62 CWARAYQDARCFGRGEGGDLQVSSGPG-------AAPPAEFRASARSAQ-GSRDVPAGPG 113
YQ GE G S PG + P + S R + G R +P PG
Sbjct: 198 ----GYQGPP----GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPG 249
Query: 114 F--PPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCS-SPGVRGPGGGASPR 170
P +P F R AP L + PG + +PG GP G R
Sbjct: 250 IKGPAGIPG-FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGER 308
Query: 171 ARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGER 230
R G AA A G S G A P P GA+ + G
Sbjct: 309 GRPGLPGAAGA---RGNDGARGSDGQPGPPGPPGTAGFPGSP---GAKGEVGPAGSPGSN 362
Query: 231 PAPRPRGPP 239
AP RG P
Sbjct: 363 GAPGQRGEP 371
Score = 33.9 bits (76), Expect = 0.14
Identities = 61/249 (24%), Positives = 73/249 (29%), Gaps = 41/249 (16%)
Query: 21 RGSQRVPQPPAAR-------SPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCF 73
RG +P P A+ SP P A G G AG GAP R G +
Sbjct: 449 RGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG-EKGPAG 507
Query: 74 GRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRL 133
RG G +GP A R G R +P PG P +P S R
Sbjct: 508 ERGAPGP----AGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRP 563
Query: 134 RRRSASA---------LPAPR-------LCPQRASPGCSSP-------GVRGPGGGASPR 170
S P P+ +R PG P G GP G P
Sbjct: 564 GPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPT 623
Query: 171 ARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGER 230
GG+ G + G + P P G G G+
Sbjct: 624 GPGGDKGDTGPPGPQGLQGLPGTGGPPGENGK------PGEPGPKGDAGAPGAPGGKGDA 677
Query: 231 PAPRPRGPP 239
AP RGPP
Sbjct: 678 GAPGERGPP 686
Score = 29.6 bits (65), Expect = 2.7
Identities = 54/182 (29%), Positives = 62/182 (34%), Gaps = 25/182 (13%)
Query: 22 GSQRVPQPPAARSPRGPRAGGG-GGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
G+ P PP P G G G AG GAP G A Q R +GE G+
Sbjct: 1044 GAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAP---GPAGSRGAPGPQGPRG-DKGETGE 1099
Query: 81 LQVSS--------GPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTR 132
+ G AP + A + A GS PAGP P P S
Sbjct: 1100 RGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPG-PAGPRGPVGPSGPPGKDGTSGHP- 1157
Query: 133 LRRRSASALPAPR-LCPQRASPGC----SSPGVRGPGGGASPRARG-GNAAAALAARQAA 186
P PR +R S G PG GP G P G G AA A + A
Sbjct: 1158 ----GPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKA 1213
Query: 187 GG 188
GG
Sbjct: 1214 GG 1215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,712,692
Number of Sequences: 37866
Number of extensions: 1040512
Number of successful extensions: 18078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 1380
Number of HSP's that attempted gapping in prelim test: 10111
Number of HSP's gapped (non-prelim): 6328
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.