Guide to the Human Genome
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Search of human proteins with 239746046

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
         (255 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]           529   e-151
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...   529   e-151
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            55   6e-08
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             55   8e-08
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            53   2e-07
gi|45439359 triple functional domain (PTPRF interacting) [Homo s...    53   2e-07
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            51   9e-07
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            51   9e-07
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            51   9e-07
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]            50   2e-06
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]            50   2e-06
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ...    50   2e-06
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]            49   4e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       49   4e-06
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       49   4e-06
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]            49   6e-06
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               49   6e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    49   6e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    49   6e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    49   6e-06
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     48   9e-06
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]            48   9e-06
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            48   9e-06
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    48   9e-06
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]            48   9e-06
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    48   9e-06
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]            48   9e-06
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]            47   1e-05
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ...    47   1e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      47   2e-05

>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score =  529 bits (1363), Expect = e-151
 Identities = 255/255 (100%), Positives = 255/255 (100%)

Query: 1   MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60
           MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG
Sbjct: 1   MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60

Query: 61  GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120
           GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR
Sbjct: 61  GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120

Query: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
           PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL
Sbjct: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180

Query: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
           AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR
Sbjct: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240

Query: 241 APARGARWLRPRRPR 255
           APARGARWLRPRRPR
Sbjct: 241 APARGARWLRPRRPR 255


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score =  529 bits (1363), Expect = e-151
 Identities = 255/255 (100%), Positives = 255/255 (100%)

Query: 1   MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60
           MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG
Sbjct: 1   MPFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG 60

Query: 61  GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120
           GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR
Sbjct: 61  GCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPR 120

Query: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
           PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL
Sbjct: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180

Query: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
           AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR
Sbjct: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240

Query: 241 APARGARWLRPRRPR 255
           APARGARWLRPRRPR
Sbjct: 241 APARGARWLRPRRPR 255


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 72/274 (26%), Positives = 102/274 (37%), Gaps = 42/274 (15%)

Query: 22  GSQRVPQPPAARSPRGPR---AGGGGGDAGGGGAPVRR---ARGGGCWARAYQDARC-FG 74
           G+Q+       +S  G +   A   G  +  G  P RR   +RG        ++A+  FG
Sbjct: 156 GAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFG 215

Query: 75  RGEGG-------------DLQVSSGPGAAPPAEFRASARSAQG--SRDVPAGPGFPPRLP 119
           +  GG               +   G G  P  + R   ++A G  SR   +  G   +L 
Sbjct: 216 KTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLR 275

Query: 120 RPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179
           R   +A+ +   R    +A   PA +    R          R   GG  PR RG  A  A
Sbjct: 276 RQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKA 335

Query: 180 LAARQAAGGGRSRSAFVAG---RDAALACAQLPRR---------PRGAGARRGMR--RRL 225
            AA    GGG  + A V G   R       + PRR          RG G ++G+R  +R 
Sbjct: 336 AAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRR 395

Query: 226 GAG------ERPAPRPRGPPRAPARGARWLRPRR 253
           G G      + P  R +  P A  RG    +PRR
Sbjct: 396 GDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRR 429



 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 70/257 (27%), Positives = 94/257 (36%), Gaps = 52/257 (20%)

Query: 37  GPRAGGGGGDA---GGGG---------APVRRARGGGC----WARAYQDARCFGRGEGGD 80
           G  + GGGG+    GGGG         A   + RGGG     W +A         G+GG 
Sbjct: 555 GATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGK 614

Query: 81  L---QVSSGPGAAPPAE-------FRASARSAQGSRDVPAGPGFP-PRLPRPFTSASFSN 129
               Q ++G GA    +         A+A  A  +     G G   PR  +P  + S S+
Sbjct: 615 KAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESS 674

Query: 130 QTRLRRRSASALPAPRLCP--------QRASPGCSSPGVRGP---------GGGASPRAR 172
                 + A A   PR           Q A+ G +    RG          GGGA  R  
Sbjct: 675 AAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGS 734

Query: 173 GGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPA 232
           GG      A  + +GG +SRS   A    +       RR  G    R   + + AG + A
Sbjct: 735 GG------AKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKA 788

Query: 233 PRPRG--PPRAPARGAR 247
               G  PPR  +RG R
Sbjct: 789 AAAGGKKPPRVKSRGGR 805



 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 23/215 (10%)

Query: 21  RGSQRVPQPPAA--RSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEG 78
           RG+    + PAA  R  RGP++ GG     G G    R RG     +A + A    +  G
Sbjct: 289 RGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRG----QKATKAAAAGTKRGG 344

Query: 79  GDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR--RR 136
           G  Q ++  G     + R   +  +  +   AG            S    ++  LR  +R
Sbjct: 345 GGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGA----------KSRGGGDKKGLREAKR 394

Query: 137 SASALPAPRLC-PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAF 195
                  PR   P+R +    +   RG GG   PR RG  AA +   +  +GGG+     
Sbjct: 395 RGDGRKKPRWQNPRRRAQKAPAAKPRG-GGSKKPRRRGPKAAKSRGGKSRSGGGKKPRR- 452

Query: 196 VAGRDAALACAQLPRRPRGAGARRGMRRRLGAGER 230
             G+ A    A+     RG   ++G ++   AG +
Sbjct: 453 -RGQKARQKAAEAGAESRG-DKKQGRQKASAAGTK 485



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 77/279 (27%), Positives = 97/279 (34%), Gaps = 69/279 (24%)

Query: 20  IRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARG----GG-------------- 61
           +RG +       AR      AG GG +  GGG     A G    GG              
Sbjct: 73  LRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAA 132

Query: 62  ------CWARAYQDARCFGRGEGGDLQ-------VSSGPGAAPPAEFRASARSAQGSRDV 108
                  W RA + A    +  G   Q       V S  G  P     A A+S  G +  
Sbjct: 133 TGSKKPRW-RAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPR 191

Query: 109 PAGP---GFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGG 165
             G    G   +  R   + S   +TR  RR     P P      A+ G  S      GG
Sbjct: 192 RRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKP------AAGGAKS----RRGG 241

Query: 166 GASP---RARGGNAAAALAARQA-AGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221
           G  P   R RG  AA    +R   + GG  +     G++AAL           AGA+R  
Sbjct: 242 GKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAAL-----------AGAKR-- 288

Query: 222 RRRLGAGERPAPR---PRGPPRAPARGARWLR----PRR 253
           R    AGE+PA +    RGP     +  RW R    PRR
Sbjct: 289 RGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRR 327



 Score = 38.5 bits (88), Expect = 0.006
 Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 32/177 (18%)

Query: 110 AGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAP-------RLCPQRASPGCSSPGVRG 162
           AGPG P       T    + ++     SA+A           +L  Q+A+ G     +RG
Sbjct: 16  AGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRG 75

Query: 163 PGGGASPRA----------------RGGNAAAALAARQAAGGGRSRSAFVAGRDAALACA 206
             G  + +                 RGG    A AA   + GGR R     G+ AA   +
Sbjct: 76  QKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGS 135

Query: 207 QLPRRPRGAGARRGMRRRLGAGERPAPRPRG--------PPRAPARGARWLRPRRPR 255
           + PR      A  G + R GAG + A    G        P +A A GA+    ++PR
Sbjct: 136 KKPRWRAQKSAAAGSKNR-GAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPR 191



 Score = 32.3 bits (72), Expect = 0.41
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 27  PQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVSSG 86
           P     + PR  ++ GGGG    G    +    GG  +R+ + A       GG  +   G
Sbjct: 710 PWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRG 769

Query: 87  PGAAPPAEFRASARSAQGSRDVPAGPGFPPRL 118
            GA   +     A +A G +   AG   PPR+
Sbjct: 770 GGA--KSRSGEKAVTAGGQKAAAAGGKKPPRV 799


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 54.7 bits (130), Expect = 8e-08
 Identities = 71/256 (27%), Positives = 101/256 (39%), Gaps = 30/256 (11%)

Query: 10  PSLCTPRVQCIRGSQRVPQPPA----ARSPRG-PRAGGGGGDAGGGGAPVRRARGGGCWA 64
           PS  +PRV+  + +   P PPA    + SPR  P + G GG A GG    RR R     +
Sbjct: 338 PSSPSPRVRD-KAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS 396

Query: 65  RAYQDA-RCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFT 123
           R+   A R  GR           P  APP     S   A+ S D  +G G P   P P +
Sbjct: 397 RSSASAPRRRGRRR---------PRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGS 447

Query: 124 SASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVR-GPGGGASPRARGGNAAAALAA 182
                   +  +        PR  P   SP   + G R GP G +S R+ G +  +  ++
Sbjct: 448 ERGHGGHGKRAKERP-----PRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502

Query: 183 RQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAP 242
           R  +   +SRS     R  + + +  P++P         R R    E    R R    +P
Sbjct: 503 RSPS---KSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSP 559

Query: 243 ARGAR-----WLRPRR 253
            R  R     ++ PRR
Sbjct: 560 IRKRRRDSPSFMEPRR 575



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 48/166 (28%), Positives = 54/166 (32%), Gaps = 42/166 (25%)

Query: 121 PFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180
           P  S+ +S+     R S       R    + S G  SP   G  G  SP+  GG+     
Sbjct: 263 PSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGS----- 317

Query: 181 AARQAAGGGRSRSAFVAG----------RDAALACAQLP--------------------- 209
             R  A GGR  SA              RD A A A  P                     
Sbjct: 318 GQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGG 377

Query: 210 RRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRRPR 255
           R   GAG RR  RRR       A  PR       RG R  RP  PR
Sbjct: 378 RAAGGAGRRRRRRRRRRRSRSSASAPR------RRGRRRPRPAPPR 417


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 67/220 (30%), Positives = 80/220 (36%), Gaps = 48/220 (21%)

Query: 37  GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQ-DARCFGRG-EGGDLQVSSGPGAAPPAE 94
           G  AG   G+ GG      R    G      Q  AR  GRG EGG L       AA    
Sbjct: 73  GKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAA---- 128

Query: 95  FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPG 154
                R    SR +   P       RP     +    R R   ++AL +PR+     +P 
Sbjct: 129 -----RRGGASRPLAGEPWREAARRRPQQCPQWG---RARESRSAALASPRVSNAPTTPA 180

Query: 155 CSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPR---- 210
             +PG+R     A  R  G         R+AAGGG +R             A+ PR    
Sbjct: 181 SRNPGLR-----AQERQSG---------RRAAGGGGAR-------------AEPPRVPPC 213

Query: 211 RPRGAGARRGMRRRLGAGERPA---PRPRGPPRAPARGAR 247
           RP G       RR  GAG R     P PR P  APA G R
Sbjct: 214 RPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLR 253



 Score = 33.5 bits (75), Expect = 0.18
 Identities = 64/217 (29%), Positives = 79/217 (36%), Gaps = 56/217 (25%)

Query: 81  LQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLP------RPFTSASFSNQTRLR 134
           L  SS   AA P     S+ SAQ   ++  G    PRLP      R FT   FS    + 
Sbjct: 22  LASSSSRSAAAP-----SSSSAQSGPEL--GLSLGPRLPSASSKLRVFTGY-FSVPHGVG 73

Query: 135 RRSASA--------LPAPRLCPQRASPGCSSPGVRG-----PGGGASPR-----ARGGNA 176
           + + +A        L A R  P     G      RG      GGG   R     AR G A
Sbjct: 74  KSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGGA 133

Query: 177 AAALAA-----------RQAAGGGRSRSAFVAGRDAALACAQLPRRPRG---------AG 216
           +  LA            +Q    GR+R +    R AALA  ++   P           A 
Sbjct: 134 SRPLAGEPWREAARRRPQQCPQWGRARES----RSAALASPRVSNAPTTPASRNPGLRAQ 189

Query: 217 ARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253
            R+  RR  G G   A  PR PP  PA  +   R RR
Sbjct: 190 ERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRR 226


>gi|45439359 triple functional domain (PTPRF interacting) [Homo
            sapiens]
          Length = 3097

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 58/231 (25%), Positives = 82/231 (35%), Gaps = 47/231 (20%)

Query: 33   RSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVSSGPGAAPP 92
            R+  G   GGG G +GGGG                        G GG    S G G +  
Sbjct: 2288 RNHSGGGGGGGSGGSGGGG------------------------GSGGGGAPSGGSGHSGG 2323

Query: 93   AEFRASARSAQGSRDVPAGPGFPPRLPRP-------FTSASFSNQTRLRRRSASALPAPR 145
                  A S   SR        P R+P+P         S++ S+Q    + S ++ P P 
Sbjct: 2324 PSSCGGAPSTSRSR--------PSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPS 2375

Query: 146  LCPQRASP--GCSSPGVRGPGGGASPRARGGNAAAAL----AARQAAGGGRSRSAFVAGR 199
            L P  A+P  G S+P  R PG  A    R       +    + R+ A      S     +
Sbjct: 2376 LPPPGAAPEAGPSAPSRRPPGADAEGSEREAEPIPKMKVLESPRKGAANASGSSPDAPAK 2435

Query: 200  DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPAR--GARW 248
            DA  +   LP     AGA   +   L +      +   PP +P +  G+ W
Sbjct: 2436 DARASLGTLPLGKPRAGAASPLNSPLSSAVPSLGKEPFPPSSPLQKGGSFW 2486



 Score = 35.8 bits (81), Expect = 0.037
 Identities = 19/39 (48%), Positives = 21/39 (53%)

Query: 164 GGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAA 202
           GG A+P A  G AAAA AA    GGG    A  A +D A
Sbjct: 6   GGAAAPAASSGPAAAASAAGSGCGGGAGEGAEEAAKDLA 44


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 64/241 (26%), Positives = 88/241 (36%), Gaps = 53/241 (21%)

Query: 10  PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
           PSL     +C R ++R    PA      PR+   GG+  G     RR RGG       ++
Sbjct: 209 PSLSPFPRRCRRRAER---SPAGHGLPLPRSLSRGGEVVGA----RRRRGG-------EE 254

Query: 70  ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
            R  GR +G                       A GS  +PAGP  P R          + 
Sbjct: 255 RRVRGRRQG----------------------CALGSPPIPAGPAAPGR----------AG 282

Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGG 189
           + R  R+       P + P+  + G    GVRG   G +PRARG +     +     GG 
Sbjct: 283 ERRAARQWRKRGGGPGVSPREGAQG---EGVRG---GVTPRARGSSTCLRPSPATWQGGA 336

Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP-RPRGPPRAPARGARW 248
             R+ F AG   +   A+    P G  A       L +    AP   R  P +PA    +
Sbjct: 337 PYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHY 396

Query: 249 L 249
           L
Sbjct: 397 L 397



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 70/294 (23%), Positives = 92/294 (31%), Gaps = 76/294 (25%)

Query: 10  PSLCTPRVQCIRGSQRVPQPPAAR------------------------------------ 33
           P++C+P  +        PQ P  R                                    
Sbjct: 33  PAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTF 92

Query: 34  -------SPRGPRAGGGGGDAGG----------GGAPVRRARGGGCWARAYQDARCFGRG 76
                  +P  PRA G  G   G          G  P   AR      R+   ARC  R 
Sbjct: 93  REASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSL--ARCLPRS 150

Query: 77  EGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRL---PRPFTSASFSNQTRL 133
            G  ++ S GP + P    R   R     R +P  P   PRL     P  +A  +     
Sbjct: 151 VGSCVRPSVGP-SLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGS--- 206

Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRS 193
             R+ S  P PR C +RA         R P G   P  R  +    +   +   GG  R 
Sbjct: 207 --RAPSLSPFPRRCRRRAE--------RSPAGHGLPLPRSLSRGGEVVGARRRRGGEERR 256

Query: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGAR 247
                +  AL    +P  P   G R G RR   A  +   R  GP  +P  GA+
Sbjct: 257 VRGRRQGCALGSPPIPAGPAAPG-RAGERR---AARQWRKRGGGPGVSPREGAQ 306



 Score = 36.6 bits (83), Expect = 0.022
 Identities = 51/175 (29%), Positives = 68/175 (38%), Gaps = 27/175 (15%)

Query: 86  GPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
           G  A  PA    +AR+      +   P  PP   R +  A+++        +  ALP  R
Sbjct: 27  GTDAPGPAVCSPTARAPP---PILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSR 83

Query: 146 ------LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
                 L  + ASPG        P  GA PRARG       +  +  G  R R+   AG+
Sbjct: 84  RLGRVPLTFREASPG--------PAPGA-PRARG-------SCGREPGPRRRRAPSSAGK 127

Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRRP 254
             A A    P  PR     R + R +G+  RP+  P  P R   R  R    RRP
Sbjct: 128 RPAAAARAAP--PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRP 180


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 64/241 (26%), Positives = 88/241 (36%), Gaps = 53/241 (21%)

Query: 10  PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
           PSL     +C R ++R    PA      PR+   GG+  G     RR RGG       ++
Sbjct: 303 PSLSPFPRRCRRRAER---SPAGHGLPLPRSLSRGGEVVGA----RRRRGG-------EE 348

Query: 70  ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
            R  GR +G                       A GS  +PAGP  P R          + 
Sbjct: 349 RRVRGRRQG----------------------CALGSPPIPAGPAAPGR----------AG 376

Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGG 189
           + R  R+       P + P+  + G    GVRG   G +PRARG +     +     GG 
Sbjct: 377 ERRAARQWRKRGGGPGVSPREGAQG---EGVRG---GVTPRARGSSTCLRPSPATWQGGA 430

Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP-RPRGPPRAPARGARW 248
             R+ F AG   +   A+    P G  A       L +    AP   R  P +PA    +
Sbjct: 431 PYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHY 490

Query: 249 L 249
           L
Sbjct: 491 L 491



 Score = 32.3 bits (72), Expect = 0.41
 Identities = 65/254 (25%), Positives = 88/254 (34%), Gaps = 46/254 (18%)

Query: 27  PQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGR-----GEGGDL 81
           P PP + + RG + G      G    P  +      W  + ++    GR       G   
Sbjct: 112 PSPPVSGTRRG-KTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHP 170

Query: 82  QVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
           Q    P A PP   R S R  +G  +  A          P    S ++     + + +  
Sbjct: 171 QSFRRPSAHPPG--RGSGRVPRGQPEQQAWEQRSSHFLAP--EGSVASLLPSAKPARAPR 226

Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
           PAPR   + A+      G RG GG   P ARG      LA        R   A      A
Sbjct: 227 PAPRAREEAAA------GSRGRGGAERPAARGSAQQPPLA--------RLLLASAVSLAA 272

Query: 202 ALACAQLPRRPR------------GAGAR--------RGMRRRLGAGERPAPRPRGPPRA 241
           +LA +  P +PR             AG+R        R  RRR  A   PA      PR+
Sbjct: 273 SLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRR--AERSPAGHGLPLPRS 330

Query: 242 PARGARWLRPRRPR 255
            +RG   +  RR R
Sbjct: 331 LSRGGEVVGARRRR 344


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 64/241 (26%), Positives = 88/241 (36%), Gaps = 53/241 (21%)

Query: 10  PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
           PSL     +C R ++R    PA      PR+   GG+  G     RR RGG       ++
Sbjct: 303 PSLSPFPRRCRRRAER---SPAGHGLPLPRSLSRGGEVVGA----RRRRGG-------EE 348

Query: 70  ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
            R  GR +G                       A GS  +PAGP  P R          + 
Sbjct: 349 RRVRGRRQG----------------------CALGSPPIPAGPAAPGR----------AG 376

Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGG 189
           + R  R+       P + P+  + G    GVRG   G +PRARG +     +     GG 
Sbjct: 377 ERRAARQWRKRGGGPGVSPREGAQG---EGVRG---GVTPRARGSSTCLRPSPATWQGGA 430

Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP-RPRGPPRAPARGARW 248
             R+ F AG   +   A+    P G  A       L +    AP   R  P +PA    +
Sbjct: 431 PYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHY 490

Query: 249 L 249
           L
Sbjct: 491 L 491



 Score = 32.3 bits (72), Expect = 0.41
 Identities = 65/254 (25%), Positives = 88/254 (34%), Gaps = 46/254 (18%)

Query: 27  PQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGR-----GEGGDL 81
           P PP + + RG + G      G    P  +      W  + ++    GR       G   
Sbjct: 112 PSPPVSGTRRG-KTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHP 170

Query: 82  QVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
           Q    P A PP   R S R  +G  +  A          P    S ++     + + +  
Sbjct: 171 QSFRRPSAHPPG--RGSGRVPRGQPEQQAWEQRSSHFLAP--EGSVASLLPSAKPARAPR 226

Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
           PAPR   + A+      G RG GG   P ARG      LA        R   A      A
Sbjct: 227 PAPRAREEAAA------GSRGRGGAERPAARGSAQQPPLA--------RLLLASAVSLAA 272

Query: 202 ALACAQLPRRPR------------GAGAR--------RGMRRRLGAGERPAPRPRGPPRA 241
           +LA +  P +PR             AG+R        R  RRR  A   PA      PR+
Sbjct: 273 SLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRR--AERSPAGHGLPLPRS 330

Query: 242 PARGARWLRPRRPR 255
            +RG   +  RR R
Sbjct: 331 LSRGGEVVGARRRR 344


>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 466

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 67/229 (29%), Positives = 85/229 (37%), Gaps = 34/229 (14%)

Query: 34  SPRGPRAGGGGGDAGGGGAPVRRARGGGC--WARAYQDARCFGRGEGGDLQVSSGPGAAP 91
           S  GPRAG  GG         R+     C    R     RC G G         G G  P
Sbjct: 159 SHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSW-----GGSGTPP 213

Query: 92  PAEF-------RASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR-----RRSAS 139
           P           A AR+     +  A PG    LP P +  +    TR R     +R   
Sbjct: 214 PPRALWNRHGGAAGARAQVRGSEKRACPG--STLP-PSSVLAGCVGTRARGHGGVQRQRF 270

Query: 140 ALPAPRLCPQRA--SPGCSSPGVRGPGGGASP-RARGGNAAAALAARQAAGGGRSRSAFV 196
           + P+      R   +P  + PG   P G A P R RGG   + L   Q  G GR      
Sbjct: 271 SAPSSHSTGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLT--QLVGSGRGSGVTH 328

Query: 197 AGRDAALACAQLPRRPRGAGARRGMRRRLGAGERP--APRPRGPPRAPA 243
           +    ALA  +  R PR  G  RG+        RP  +P P+ PPR+P+
Sbjct: 329 SVGTHALATRRGSRAPRPVGVLRGVPH-----FRPLSSPAPQSPPRSPS 372



 Score = 36.2 bits (82), Expect = 0.029
 Identities = 59/204 (28%), Positives = 72/204 (35%), Gaps = 53/204 (25%)

Query: 22  GSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDL 81
           G++ +P P  AR          G  A  G AP  R RGGG  +   Q     G G G  +
Sbjct: 279 GARTLPTPSRARP---------GKPAPRGSAPPARLRGGGGGSGLTQ---LVGSGRGSGV 326

Query: 82  QVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
             S G  A       A+ R ++  R V    G P    RP +S                 
Sbjct: 327 THSVGTHAL------ATRRGSRAPRPVGVLRGVPHF--RPLSS----------------- 361

Query: 142 PAPRLCPQRASPGCSSPGVR--GPGGGA-------SPRARGGNAAAALAARQAAGGGRSR 192
           PAP+  P+       SP VR  GP  GA       +PRA      A LA   A   G  R
Sbjct: 362 PAPQSPPR-------SPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQR 414

Query: 193 SAFVAGRDAALACAQLPRRPRGAG 216
                G     A  +  R  RGAG
Sbjct: 415 CEGCGGGSQPFAGRRAERGKRGAG 438


>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 44/236 (18%)

Query: 21  RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
           RGS R      AR   G RA  G G AG GG  + R+      ++A + A+         
Sbjct: 16  RGSWRTRSRQEARPGGGSRARPGPG-AGPGGEVLGRSSSTPASSKASRTAQ--------- 65

Query: 81  LQVSSGPGAAPPAEFRASARSAQGSRDVPA-GPGFPPRLPRPFTSASFSNQTRLRRRSAS 139
           ++ ++  G+ P      S+ S    + V   G G  P+   P+  A   +Q+   R +AS
Sbjct: 66  MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA-ERSAAS 124

Query: 140 ALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
           + P  + C     P C                  G   ++ + + +AGGGR     V+GR
Sbjct: 125 STPPEKTCAPGMKPWC------------------GERCSSSSRKPSAGGGRDGGVAVSGR 166

Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPP----RAPARGARWLRP 251
           D   A   L  R          R+RLG G R     R  P      P    RW  P
Sbjct: 167 DQPAARTMLAAR----------RQRLGPGRRELLMARSFPDPILARPELHGRWPGP 212


>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
           sapiens]
          Length = 261

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 44/236 (18%)

Query: 21  RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
           RGS R      AR   G RA  G G AG GG  + R+      ++A + A+         
Sbjct: 16  RGSWRTRSRQEARPGGGSRARPGPG-AGPGGEVLGRSSSTPASSKASRTAQ--------- 65

Query: 81  LQVSSGPGAAPPAEFRASARSAQGSRDVPA-GPGFPPRLPRPFTSASFSNQTRLRRRSAS 139
           ++ ++  G+ P      S+ S    + V   G G  P+   P+  A   +Q+   R +AS
Sbjct: 66  MRKATSSGSVPVLSVLWSSVSGSDGKAVRLNGAGPRPKRGGPWCGAKRPSQSA-ERSAAS 124

Query: 140 ALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGR 199
           + P  + C     P C                  G   ++ + + +AGGGR     V+GR
Sbjct: 125 STPPEKTCAPGMKPWC------------------GERCSSSSRKPSAGGGRDGGVAVSGR 166

Query: 200 DAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPP----RAPARGARWLRP 251
           D   A   L  R          R+RLG G R     R  P      P    RW  P
Sbjct: 167 DQPAARTMLAAR----------RQRLGPGRRELLMARSFPDPILARPELHGRWPGP 212


>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 62/195 (31%), Positives = 70/195 (35%), Gaps = 31/195 (15%)

Query: 28  QPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-VSSG 86
           + P      G  AGGGGG  G GG   +R  G G  AR    A     G GG+LQ     
Sbjct: 24  EAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAG--ARRPIGA-APSVGPGGELQGWGRK 80

Query: 87  PGAAPPA-EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
            G  PP  E  A  R  +           PPR    F   S   QT +RRR   A P+PR
Sbjct: 81  SGCRPPGPEGWAGGRKLR--------RWLPPRRFSNFCCRSPCAQTAVRRRRRRA-PSPR 131

Query: 146 LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALAC 205
               R   G          G  +P    G   AA        G R R    +GR      
Sbjct: 132 GAGWREGAG---------AGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRP----- 177

Query: 206 AQLPRRPRGAGARRG 220
              PRR RG GA  G
Sbjct: 178 ---PRRGRGGGALGG 189



 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)

Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
           PA RL P+++S         GPGGG    A GG            GGG        GR A
Sbjct: 7   PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGG------------GGGLGS----GGRSA 50

Query: 202 ALACAQLPRRPRGAGARRGMRRRL-GAGERPAPRPRGPP--RAPARGARWLRPRR 253
                   RRP GA    G    L G G +   RP GP       +  RWL PRR
Sbjct: 51  QRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRR 105


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 52/167 (31%), Positives = 66/167 (39%), Gaps = 31/167 (18%)

Query: 77  EGGDLQVSSGPGA-APPAEFRASARSAQGSRDV--PAGPGFPPRLPRPFTSASFSNQTRL 133
           +GG  Q   GP    PP + R   +  Q    +  PAG   P RLP P            
Sbjct: 464 QGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP------------ 511

Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRS 193
              SA   PA +  P     G  S  V G G GA P AR    A+    RQA     +R 
Sbjct: 512 --TSAPQQPASQAAPPTQGQGRQSRPVAG-GPGAPPAARP--PASPSPQRQAGPPQATRQ 566

Query: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
             V+G          P  P+ +GA  G ++R G  ++P P P GP R
Sbjct: 567 TSVSG----------PAPPKASGAPPGGQQRQGPPQKP-PGPAGPTR 602



 Score = 36.6 bits (83), Expect = 0.022
 Identities = 51/165 (30%), Positives = 58/165 (35%), Gaps = 22/165 (13%)

Query: 22  GSQRVPQPPAARSPRGPRAGGGGGDAGGG----GAPVRRARGGGCWARAYQDARCFGRGE 77
           G Q   QP    + + P   GG    G G    G P+++        +  Q     G   
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP----PQGQQHLSGLGPPA 500

Query: 78  GGDL-QVSSGPGAAP--PAEFRASARSAQG--SRDVPAGPGFPPRL-----PRPFTSASF 127
           G  L Q    P +AP  PA   A     QG  SR V  GPG PP       P P   A  
Sbjct: 501 GSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGP 560

Query: 128 SNQTRLRRRSASALP----APRLCPQRASPGCSSPGVRGPGGGAS 168
              TR    S  A P    AP    QR  P    PG  GP   AS
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQAS 605



 Score = 29.3 bits (64), Expect = 3.5
 Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 148 PQRASPGCSSPGVR-GPGGGASPRARGGNAAAALAA---RQAAGGGRSRSAFVAGRDAAL 203
           P    PG  SPG   GPG   + R+ G   AA+ AA     + GGG   S   A +    
Sbjct: 30  PPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGFFSSLSNAVKQTTA 89

Query: 204 ACAQLPRRPRGAGARRGMRRRLGAGER 230
           A A       G G+  G   R GA  R
Sbjct: 90  AAAATFSEQVGGGS--GGAGRGGAASR 114


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 52/167 (31%), Positives = 66/167 (39%), Gaps = 31/167 (18%)

Query: 77  EGGDLQVSSGPGA-APPAEFRASARSAQGSRDV--PAGPGFPPRLPRPFTSASFSNQTRL 133
           +GG  Q   GP    PP + R   +  Q    +  PAG   P RLP P            
Sbjct: 464 QGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP------------ 511

Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRS 193
              SA   PA +  P     G  S  V G G GA P AR    A+    RQA     +R 
Sbjct: 512 --TSAPQQPASQAAPPTQGQGRQSRPVAG-GPGAPPAARP--PASPSPQRQAGPPQATRQ 566

Query: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPR 240
             V+G          P  P+ +GA  G ++R G  ++P P P GP R
Sbjct: 567 TSVSG----------PAPPKASGAPPGGQQRQGPPQKP-PGPAGPTR 602



 Score = 36.6 bits (83), Expect = 0.022
 Identities = 51/165 (30%), Positives = 58/165 (35%), Gaps = 22/165 (13%)

Query: 22  GSQRVPQPPAARSPRGPRAGGGGGDAGGG----GAPVRRARGGGCWARAYQDARCFGRGE 77
           G Q   QP    + + P   GG    G G    G P+++        +  Q     G   
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP----PQGQQHLSGLGPPA 500

Query: 78  GGDL-QVSSGPGAAP--PAEFRASARSAQG--SRDVPAGPGFPPRL-----PRPFTSASF 127
           G  L Q    P +AP  PA   A     QG  SR V  GPG PP       P P   A  
Sbjct: 501 GSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGP 560

Query: 128 SNQTRLRRRSASALP----APRLCPQRASPGCSSPGVRGPGGGAS 168
              TR    S  A P    AP    QR  P    PG  GP   AS
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQAS 605



 Score = 29.3 bits (64), Expect = 3.5
 Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 148 PQRASPGCSSPGVR-GPGGGASPRARGGNAAAALAA---RQAAGGGRSRSAFVAGRDAAL 203
           P    PG  SPG   GPG   + R+ G   AA+ AA     + GGG   S   A +    
Sbjct: 30  PPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGFFSSLSNAVKQTTA 89

Query: 204 ACAQLPRRPRGAGARRGMRRRLGAGER 230
           A A       G G+  G   R GA  R
Sbjct: 90  AAAATFSEQVGGGS--GGAGRGGAASR 114


>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 40/109 (36%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
           P P LC  R +PG +   V   G   SP A    A  AL     A G R R A   G   
Sbjct: 39  PRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGR-ATTRGEVQ 97

Query: 202 ALACAQLPRRP-RGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWL 249
                 L  RP RG G  RG   R G G  P P  R PP  P     WL
Sbjct: 98  PSVRPPLSHRPLRGGGMGRG---RPGKGPPPNPSRRLPPAPPGGRRTWL 143



 Score = 32.0 bits (71), Expect = 0.54
 Identities = 52/199 (26%), Positives = 61/199 (30%), Gaps = 56/199 (28%)

Query: 10  PSLCTPRVQCIRGSQ------RVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRA------ 57
           P LC PR    R          VP PPAA  P  P   G     G  G    R       
Sbjct: 41  PPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSV 100

Query: 58  ---------RGGGCWARAYQDARCFGRGEGGDLQVSSGPGAAPPAE--FRASARSAQGSR 106
                    RGGG            GRG  G     +     PPA    R +  SA  + 
Sbjct: 101 RPPLSHRPLRGGG-----------MGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATG 149

Query: 107 DVPAGPGFPPRLPRPFTSA--------------------SFSNQTRLRRRSASALPAPRL 146
               G G   R P  F +A                    + S++    RRS +    PR 
Sbjct: 150 PAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRG 209

Query: 147 CPQRASPGC--SSPGVRGP 163
            P RA+P     SP   GP
Sbjct: 210 LPLRATPESFKGSPDCTGP 228


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 75/273 (27%), Positives = 99/273 (36%), Gaps = 41/273 (15%)

Query: 10  PSLCTPRVQCIR-GSQRVPQPPAARSPRGPRAGG----GGGDAGGGGAPV---------- 54
           P  C+   +  R G    P P  A + R PR  G       DAGG G P+          
Sbjct: 200 PEACSSAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRR 259

Query: 55  RRARGGGCWARAYQDARCFGRGEGGDLQVSS----GPGAAPPAEFRASARSAQGSRDVPA 110
           RR RG G      Q     G  +GG  + +S     P A+P       AR     R V  
Sbjct: 260 RRRRGAG------QPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLER-VGG 312

Query: 111 GPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPR 170
            P  P  L R + S S+ ++      +  A P+P   P   + G        PG  A+ R
Sbjct: 313 HPTSPAALSRAWAS-SWESEAAPEPAAPPAAPSP---PDSPAEGRLVKAQYIPGAQAATR 368

Query: 171 ARGGNAAA--------ALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMR 222
              G AA           +  Q+    R R+A   GR A  +  +   R R A   +   
Sbjct: 369 GLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSET 428

Query: 223 RRLGAGERPAPRPRGPPRAPARGARWLRPRRPR 255
             LG   R +  P GPP+ P       RP RPR
Sbjct: 429 SLLG---RASAVPSGPPKYPTAEREEPRPPRPR 458


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 60/208 (28%), Positives = 77/208 (37%), Gaps = 37/208 (17%)

Query: 30  PAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCW---ARAYQDARCFGRGEGGDLQVSS- 85
           P A    G   GGGGG  GGGG     A G G     A A   A   G G GG    SS 
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305

Query: 86  -----------------GPGAAPPAEF-RASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
                            GPG    A   +A+A SA G     AG    P    P  +   
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365

Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAG 187
           ++ + + R    +       P+ +SP  S+P    P   + P+++   A AA   +QAA 
Sbjct: 366 TSPSPMMRSYGGSY------PEYSSP--SAP----PPPPSQPQSQAAAAGAAAGGQQAAA 413

Query: 188 G---GRSRSAFVAGRDAALACAQLPRRP 212
           G   G+   A  A    A A AQ    P
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHP 441



 Score = 35.4 bits (80), Expect = 0.049
 Identities = 64/242 (26%), Positives = 75/242 (30%), Gaps = 45/242 (18%)

Query: 27  PQP-PAARSPR--GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQV 83
           PQP P    P+  G +    GG A   G P+    G    A         GR E   L  
Sbjct: 90  PQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGA 149

Query: 84  -------------SSGPGAAPPAE-FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
                          GP A P    +  SA  A G     AGP F               
Sbjct: 150 LGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH-----GGQQSPG 204

Query: 130 QTRLRRRSASALPAP-RLCPQRAS------------PGCSSPGVRGPGGGASPRARGGNA 176
              +   SA+A  AP  + P + S            PG S PG  G GGG      GG  
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG----GGGG 260

Query: 177 AAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM-RRRLGAGERPAPRP 235
            +        GGG    A  AG  A  A A       G G   G      G G   +PR 
Sbjct: 261 GSG-----GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315

Query: 236 RG 237
           +G
Sbjct: 316 QG 317



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 84  SSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPA 143
           SS    + PA+   S  ++     +P GP      P P  S   SNQ+R    S +++P 
Sbjct: 649 SSQGDQSNPAQSPFSPHASPHLSSIPGGPS-----PSPVGSPVGSNQSRSGPISPASIPG 703

Query: 144 PRLCPQRASPGCSSPGVRGPGGGASP 169
            ++ PQ   PG  S     P    SP
Sbjct: 704 SQMPPQ--PPGSQSESSSHPALSQSP 727


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 60/208 (28%), Positives = 77/208 (37%), Gaps = 37/208 (17%)

Query: 30  PAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCW---ARAYQDARCFGRGEGGDLQVSS- 85
           P A    G   GGGGG  GGGG     A G G     A A   A   G G GG    SS 
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305

Query: 86  -----------------GPGAAPPAEF-RASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
                            GPG    A   +A+A SA G     AG    P    P  +   
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365

Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAG 187
           ++ + + R    +       P+ +SP  S+P    P   + P+++   A AA   +QAA 
Sbjct: 366 TSPSPMMRSYGGSY------PEYSSP--SAP----PPPPSQPQSQAAAAGAAAGGQQAAA 413

Query: 188 G---GRSRSAFVAGRDAALACAQLPRRP 212
           G   G+   A  A    A A AQ    P
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHP 441



 Score = 35.4 bits (80), Expect = 0.049
 Identities = 64/242 (26%), Positives = 75/242 (30%), Gaps = 45/242 (18%)

Query: 27  PQP-PAARSPR--GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQV 83
           PQP P    P+  G +    GG A   G P+    G    A         GR E   L  
Sbjct: 90  PQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGA 149

Query: 84  -------------SSGPGAAPPAE-FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
                          GP A P    +  SA  A G     AGP F               
Sbjct: 150 LGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH-----GGQQSPG 204

Query: 130 QTRLRRRSASALPAP-RLCPQRAS------------PGCSSPGVRGPGGGASPRARGGNA 176
              +   SA+A  AP  + P + S            PG S PG  G GGG      GG  
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG----GGGG 260

Query: 177 AAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM-RRRLGAGERPAPRP 235
            +        GGG    A  AG  A  A A       G G   G      G G   +PR 
Sbjct: 261 GSG-----GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315

Query: 236 RG 237
           +G
Sbjct: 316 QG 317



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 84  SSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPA 143
           SS    + PA+   S  ++     +P GP      P P  S   SNQ+R    S +++P 
Sbjct: 636 SSQGDQSNPAQSPFSPHASPHLSSIPGGPS-----PSPVGSPVGSNQSRSGPISPASIPG 690

Query: 144 PRLCPQRASPGCSSPGVRGPGGGASP 169
            ++ PQ   PG  S     P    SP
Sbjct: 691 SQMPPQ--PPGSQSESSSHPALSQSP 714


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 60/208 (28%), Positives = 77/208 (37%), Gaps = 37/208 (17%)

Query: 30  PAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCW---ARAYQDARCFGRGEGGDLQVSS- 85
           P A    G   GGGGG  GGGG     A G G     A A   A   G G GG    SS 
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305

Query: 86  -----------------GPGAAPPAEF-RASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
                            GPG    A   +A+A SA G     AG    P    P  +   
Sbjct: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365

Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAG 187
           ++ + + R    +       P+ +SP  S+P    P   + P+++   A AA   +QAA 
Sbjct: 366 TSPSPMMRSYGGSY------PEYSSP--SAP----PPPPSQPQSQAAAAGAAAGGQQAAA 413

Query: 188 G---GRSRSAFVAGRDAALACAQLPRRP 212
           G   G+   A  A    A A AQ    P
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHP 441



 Score = 35.4 bits (80), Expect = 0.049
 Identities = 64/242 (26%), Positives = 75/242 (30%), Gaps = 45/242 (18%)

Query: 27  PQP-PAARSPR--GPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQV 83
           PQP P    P+  G +    GG A   G P+    G    A         GR E   L  
Sbjct: 90  PQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGA 149

Query: 84  -------------SSGPGAAPPAE-FRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSN 129
                          GP A P    +  SA  A G     AGP F               
Sbjct: 150 LGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH-----GGQQSPG 204

Query: 130 QTRLRRRSASALPAP-RLCPQRAS------------PGCSSPGVRGPGGGASPRARGGNA 176
              +   SA+A  AP  + P + S            PG S PG  G GGG      GG  
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG----GGGG 260

Query: 177 AAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM-RRRLGAGERPAPRP 235
            +        GGG    A  AG  A  A A       G G   G      G G   +PR 
Sbjct: 261 GSG-----GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315

Query: 236 RG 237
           +G
Sbjct: 316 QG 317



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 84  SSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPA 143
           SS    + PA+   S  ++     +P GP      P P  S   SNQ+R    S +++P 
Sbjct: 636 SSQGDQSNPAQSPFSPHASPHLSSIPGGPS-----PSPVGSPVGSNQSRSGPISPASIPG 690

Query: 144 PRLCPQRASPGCSSPGVRGPGGGASP 169
            ++ PQ   PG  S     P    SP
Sbjct: 691 SQMPPQ--PPGSQSESSSHPALSQSP 714


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 70/238 (29%), Positives = 82/238 (34%), Gaps = 19/238 (7%)

Query: 21  RGSQRVPQPPAARS------PRGPRAG-GGGGDAGGGGAPVRRARGGGCWARAYQDARCF 73
           RG    P P  AR       P GP    G  G  G  GAP  +   G     A       
Sbjct: 222 RGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAV-GNAGPAGPAG 280

Query: 74  GRGEGG--DLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFP-PR-LPRPFTSASFSN 129
            RGE G   L    GP   P A     A+ A G   V   PG P PR +P P  +A  + 
Sbjct: 281 PRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATG 340

Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSP-GVRGPGGGASPRARGGNAAAALAARQAAGG 188
              L      A  +      +  PG + P G  GP G    R   G A +A         
Sbjct: 341 ARGLVGEPGPA-GSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLR 399

Query: 189 GRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAP----RPRGPPRAP 242
           G   S  + G D   A    P   RGA    G+R   G   RP       PRG P +P
Sbjct: 400 GSPGSRGLPGADGR-AGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSP 456



 Score = 37.4 bits (85), Expect = 0.013
 Identities = 62/248 (25%), Positives = 73/248 (29%), Gaps = 43/248 (17%)

Query: 22  GSQRVPQPPAARSPRGPR-AGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
           G+   P P  A   RG   A G  G AG  G+P  R   G      +             
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP---------- 728

Query: 81  LQVSSGPGAAPPAEFRASARSAQGSRDV-----------PAGPGFPPRLPRPFTSASFSN 129
               +G    P A+    A+  +G   V           PAGP  PP             
Sbjct: 729 ----AGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPG 784

Query: 130 QTRLRRRSASALPAPRLCPQRASPGCSSP----GVRGPGGGASPRARGGNAAAALAARQA 185
            T     +    P P        PG   P    G+RGP G   P  R G   A      A
Sbjct: 785 MTGFPGAAGRTGP-PGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFA 843

Query: 186 AGGGRSRSAFVAGRDAALACAQLPRRP-----RGAGARRGMRRRLGAGERPA-------P 233
              G S  A  AG         L   P      G+   RG+    GA   P        P
Sbjct: 844 GEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPP 903

Query: 234 RPRGPPRA 241
             RGPP A
Sbjct: 904 GARGPPGA 911



 Score = 35.0 bits (79), Expect = 0.063
 Identities = 59/230 (25%), Positives = 72/230 (31%), Gaps = 45/230 (19%)

Query: 29  PPAARSPRGPRAG-GGGGDAGGGGAPVRRARGG-----------GCWARAYQDARCFGRG 76
           P     P GP    G GG  G  G P    R G           G    A ++     RG
Sbjct: 764 PAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRG 823

Query: 77  EGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRR 136
           + G +  +   GA  P  F A  +   G     AG   PP  P P        Q  L   
Sbjct: 824 DQGPVGRTGEVGAVGPPGF-AGEKGPSGE----AGTAGPPGTPGP--------QGLLGAP 870

Query: 137 SASALPAPRLCPQRASPGCSSP-------GVRGPGGGASPRARGGNAAAALAARQAAGGG 189
               LP  R   +R  PG +         G+ GP G   P    G+     A  +A   G
Sbjct: 871 GILGLPGSR--GERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928

Query: 190 RSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLG-AGERPAPRPRGP 238
              +    GRD             G    RG    +G  G   AP P GP
Sbjct: 929 NPGNDGPPGRDG----------QPGHKGERGYPGNIGPVGAAGAPGPHGP 968



 Score = 34.7 bits (78), Expect = 0.083
 Identities = 61/241 (25%), Positives = 74/241 (30%), Gaps = 40/241 (16%)

Query: 21  RGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGG--GCWARAYQDARCFGRGEG 78
           RG +  P    A  P GP   G  G +G  G    +   G  G    A         GE 
Sbjct: 588 RGERGPPGESGAAGPTGPI--GSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGER 645

Query: 79  GDLQVSSGPGAAPPAEFRASARSA--QGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRR 136
           G   +  G G       R    +    G+R  P   G P            +  T  R  
Sbjct: 646 GAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGP----------AGATGDRGE 695

Query: 137 SASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA----LAARQAAGGGRSR 192
           + +A PA    P+       SPG RG  G A P    G A AA        + A G +  
Sbjct: 696 AGAAGPAGPAGPR------GSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGE 749

Query: 193 SAFVAGRDAALACAQL-------PRRPRGAGARRGMRRRLGAGERPAP-------RPRGP 238
           +  V       A           P   RG G   GM    GA  R  P        P GP
Sbjct: 750 NGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGP 809

Query: 239 P 239
           P
Sbjct: 810 P 810



 Score = 33.9 bits (76), Expect = 0.14
 Identities = 62/233 (26%), Positives = 75/233 (32%), Gaps = 19/233 (8%)

Query: 22  GSQRVPQPPAARSPRGPRA-GGGGGDAGGGGAPVRRARGGGCWARAYQ-DARCFGR---- 75
           GS   P PP  R   G R   G  G AG  G P  R   G    R    DA   G     
Sbjct: 388 GSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLM 447

Query: 76  ------GEGGDLQVSS--GPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127
                 G  G++  +   GP   P  + R       G+R  P   GFP   P+  T    
Sbjct: 448 GPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPG--PKGPTGDPG 505

Query: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSP-GVRGPGGGASPRARGGNAAAALAARQAA 186
            N  +     A A  AP       + G   P GV+G  G   P    G       +  A 
Sbjct: 506 KNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAG 565

Query: 187 GGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLG-AGERPAPRPRGP 238
             G+     + G +  L     PR  RG     G     G  G R    P GP
Sbjct: 566 EVGKPGERGLHG-EFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGP 617



 Score = 30.0 bits (66), Expect = 2.0
 Identities = 64/275 (23%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 11  SLCTPRVQCIRGSQRVPQPPAARSPRGPRA----------GGGGGDAGGGGAPVRRARGG 60
           +LC    Q ++       P   R PRG R            G  G  G  G P     GG
Sbjct: 16  TLCLATCQSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGG 75

Query: 61  GCWARAYQDARCFGRGEGGDLQVSSGPGAA----------PPAEFRASARSAQGSRDVPA 110
              A+        G G  G +     PGAA          P  E     ++       PA
Sbjct: 76  NFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPA 135

Query: 111 GP-------GFPPRLPRPFTSASFSNQTRLRRRSASALPAPR-------LCPQRASPGCS 156
           GP       G P +  RP        Q          LP  +       L   +  PG  
Sbjct: 136 GPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPG-- 193

Query: 157 SPGVRG----PGGGASPRARGGNAAAALAARQAAGG-----GRSRSAFVAGRDAALACAQ 207
           +PGV+G    PG   +P   G         R  A G     G   S    G    +  A 
Sbjct: 194 APGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAG 253

Query: 208 LPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAP 242
            P  P   G +  +     AG      PRG    P
Sbjct: 254 PPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLP 288


>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)

Query: 21  RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
           R + R P+P A      +    G    GG G AG GG  V  +  G C     Q      
Sbjct: 114 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 167

Query: 75  RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
              GG    S+G    P    A  R   R         S  G +   A P  P R  + F
Sbjct: 168 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220

Query: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
            S  FS++  +    A +L A R        P  A P    P   GP  GA  R R    
Sbjct: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280

Query: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
           A   +   ++GGGR  S    G    L      + L R     G    MR  +G G R  
Sbjct: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340

Query: 233 PRPRGPPRAPARGARW 248
                 PRAP  G+ W
Sbjct: 341 ------PRAPDAGSFW 350


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 61/199 (30%), Positives = 78/199 (39%), Gaps = 34/199 (17%)

Query: 22  GSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPV---RRARGGGCWARAYQDA-------- 70
           G++R   PP       P A  G  +  G G P+    R+   G  ARA + A        
Sbjct: 47  GARRGHSPPTV----APAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAG 102

Query: 71  ---RCFGRGEGGDLQVSSGPGAA--PPAEFR----ASARSAQGSRDVPAGPGFPPRLPRP 121
              R  GRG     + S  PG A   PA       A+A S+ G+R VPA      RLP P
Sbjct: 103 PPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPA-----RRLPPP 157

Query: 122 FTSASFSNQTR-LRRRSASALP----APRLCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
               S    +R LRR  ++ALP    + R       PG   PG  G        A    A
Sbjct: 158 CGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAA 217

Query: 177 AAALAARQAAGGGRSRSAF 195
           AA++A    A  G   +AF
Sbjct: 218 AASVAPPPPAVAGAPAAAF 236



 Score = 32.0 bits (71), Expect = 0.54
 Identities = 39/134 (29%), Positives = 47/134 (35%), Gaps = 29/134 (21%)

Query: 144 PRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA--LAARQAAGGGRSRSAFVAGRDA 201
           P + P  ++     PG  GP    +  A  G  A A   A R+A   G    A   GR A
Sbjct: 55  PTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGRGRAA 114

Query: 202 ALACAQLPRRPRG----------------AGARRGMRRR---------LGAGERPAPRPR 236
           A   +  P   RG                AG R    RR         LGAG R   RP 
Sbjct: 115 ATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPG 174

Query: 237 GP--PRAPARGARW 248
               PR+P+   RW
Sbjct: 175 SAALPRSPSSSRRW 188


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 74/242 (30%), Positives = 87/242 (35%), Gaps = 73/242 (30%)

Query: 32  ARSPRG-------PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVS 84
           +RSPRG       PRA G GG AGGGG    R RG            C G G  G    +
Sbjct: 76  SRSPRGAGPGAAGPRAAGRGG-AGGGGRCCTRGRGR---------FPCAGSGGRG----A 121

Query: 85  SGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSAS--ALP 142
              G   P+  R+S                         S ++    +LR R A   A P
Sbjct: 122 RSRGCHSPSCCRSS-------------------------SCAWHRWPQLRGREAEPRASP 156

Query: 143 APRLC----PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAG 198
           A  +C    P+ A P     G R   G A+ RA+    +A  AAR    G R+R      
Sbjct: 157 ALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR----GRRTR------ 206

Query: 199 RDAALACAQLPRRPRGAGARRGMRRRLGA------GERPAPRPRGPPRAPARGARWLRPR 252
                A    P RPR  G R G   R GA      G R A    G  R P R  R L P 
Sbjct: 207 -----ASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPI 261

Query: 253 RP 254
            P
Sbjct: 262 HP 263


>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)

Query: 21  RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
           R + R P+P A      +    G    GG G AG GG  V  +  G C     Q      
Sbjct: 114 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 167

Query: 75  RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
              GG    S+G    P    A  R   R         S  G +   A P  P R  + F
Sbjct: 168 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 220

Query: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
            S  FS++  +    A +L A R        P  A P    P   GP  GA  R R    
Sbjct: 221 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 280

Query: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
           A   +   ++GGGR  S    G    L      + L R     G    MR  +G G R  
Sbjct: 281 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 340

Query: 233 PRPRGPPRAPARGARW 248
                 PRAP  G+ W
Sbjct: 341 ------PRAPDAGSFW 350


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 74/242 (30%), Positives = 87/242 (35%), Gaps = 73/242 (30%)

Query: 32  ARSPRG-------PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQVS 84
           +RSPRG       PRA G GG AGGGG    R RG            C G G  G    +
Sbjct: 76  SRSPRGAGPGAAGPRAAGRGG-AGGGGRCCTRGRGR---------FPCAGSGGRG----A 121

Query: 85  SGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSAS--ALP 142
              G   P+  R+S                         S ++    +LR R A   A P
Sbjct: 122 RSRGCHSPSCCRSS-------------------------SCAWHRWPQLRGREAEPRASP 156

Query: 143 APRLC----PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAG 198
           A  +C    P+ A P     G R   G A+ RA+    +A  AAR    G R+R      
Sbjct: 157 ALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAAR----GRRTR------ 206

Query: 199 RDAALACAQLPRRPRGAGARRGMRRRLGA------GERPAPRPRGPPRAPARGARWLRPR 252
                A    P RPR  G R G   R GA      G R A    G  R P R  R L P 
Sbjct: 207 -----ASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRPLRRLVPI 261

Query: 253 RP 254
            P
Sbjct: 262 HP 263


>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 536

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)

Query: 21  RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
           R + R P+P A      +    G    GG G AG GG  V  +  G C     Q      
Sbjct: 151 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 204

Query: 75  RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
              GG    S+G    P    A  R   R         S  G +   A P  P R  + F
Sbjct: 205 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 257

Query: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
            S  FS++  +    A +L A R        P  A P    P   GP  GA  R R    
Sbjct: 258 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 317

Query: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
           A   +   ++GGGR  S    G    L      + L R     G    MR  +G G R  
Sbjct: 318 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 377

Query: 233 PRPRGPPRAPARGARW 248
                 PRAP  G+ W
Sbjct: 378 ------PRAPDAGSFW 387


>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 69/229 (30%), Positives = 80/229 (34%), Gaps = 55/229 (24%)

Query: 28  QPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-VSSG 86
           + P      G  AGGGGG  G GG   +R  G G  AR    A     G GG+LQ     
Sbjct: 24  EAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAG--ARRPIGA-APSVGPGGELQGWGRK 80

Query: 87  PGAAPPA-EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
            G  PP  E  A  R  +           PPR    F   S   QT +RRR         
Sbjct: 81  SGCRPPGPEGWAGGRKLR--------RWLPPRRFSNFCCRSPCAQTAVRRR--------- 123

Query: 146 LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALAC 205
              +R +P              SPR  G         R+ AG GR   A +AG + A   
Sbjct: 124 ---RRRAP--------------SPRGAGW--------REGAGAGRGTPATMAGGEWAAEP 158

Query: 206 AQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRRP 254
             LP+R R A         L   ER A   R   R   R  R L P  P
Sbjct: 159 LHLPQRGRPA--------PLHLPEREATEARPRRRRARRRLRVLEPHPP 199



 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)

Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
           PA RL P+++S         GPGGG    A GG            GGG        GR A
Sbjct: 7   PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGG------------GGGLGS----GGRSA 50

Query: 202 ALACAQLPRRPRGAGARRGMRRRL-GAGERPAPRPRGPP--RAPARGARWLRPRR 253
                   RRP GA    G    L G G +   RP GP       +  RWL PRR
Sbjct: 51  QRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRR 105


>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
           sapiens]
          Length = 224

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 34/135 (25%)

Query: 120 RPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179
           R  T+A      R R   ++AL +PR+     +P   +PG+R     A  R  G      
Sbjct: 75  RAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLR-----AQERQSG------ 123

Query: 180 LAARQAAGGGRSRSAFVAGRDAALACAQLPR----RPRGAGARRGMRRRLGAGERPA--- 232
              R+AAGGG +R             A+ PR    RP G       RR  GAG R     
Sbjct: 124 ---RRAAGGGGAR-------------AEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167

Query: 233 PRPRGPPRAPARGAR 247
           P PR P  APA G R
Sbjct: 168 PPPRPPGTAPAAGLR 182



 Score = 37.4 bits (85), Expect = 0.013
 Identities = 39/122 (31%), Positives = 47/122 (38%), Gaps = 15/122 (12%)

Query: 141 LPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200
           L A R  P     G   P V   GGG      G  A  A+ A +    GR+R +    R 
Sbjct: 40  LQATRTWPAGILEG--GPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRARES----RS 93

Query: 201 AALACAQLPRRPRG---------AGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRP 251
           AALA  ++   P           A  R+  RR  G G   A  PR PP  PA  +   R 
Sbjct: 94  AALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRS 153

Query: 252 RR 253
           RR
Sbjct: 154 RR 155



 Score = 35.0 bits (79), Expect = 0.063
 Identities = 42/133 (31%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 30  PAARSPRGPR--AGGGGGDAGGGGAPVRR---ARGGGCWARAYQDARCFGRGEGGDLQVS 84
           PA     GP+  A GGG    GGG   RR   A   G W RA +++R             
Sbjct: 47  PAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRA-RESRSAALASPRVSNAP 105

Query: 85  SGPGAAPP---AEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
           + P +  P   A+ R S R A G     A    PPR+P P   A  S   R RR + +  
Sbjct: 106 TTPASRNPGLRAQERQSGRRAAGGGGARAE---PPRVP-PCRPAGCSGGNRSRRAAGAGP 161

Query: 142 PAPRLCPQRASPG 154
              R  P    PG
Sbjct: 162 RTTRRKPPPRPPG 174


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 62/235 (26%), Positives = 79/235 (33%), Gaps = 17/235 (7%)

Query: 14   TPRVQCIRGSQRVPQPPAARSPRGPRAGGG-GGDAGGGGAPVRRARGGGCWARAYQDARC 72
            +P  Q ++G    P        RGP    G  G AG  G P R    G       +D   
Sbjct: 970  SPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPG-RDGSP 1028

Query: 73   FGRGEGGDLQVSSGPGA----APPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFS 128
             G+G+ G+      PGA     PP     + +S       PAGP   P  P     A   
Sbjct: 1029 GGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPG-PAGSRGAPGP 1087

Query: 129  NQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGG 188
               R  +       A  +   R  PG  +PG  G  G A  +   G+   A         
Sbjct: 1088 QGPRGDKGETGERGAAGIKGHRGFPG--NPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPS 1145

Query: 189  GRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPA-PRPRGPPRAP 242
            G       +G    +     P  PRG    RG R   G+   P  P P GPP AP
Sbjct: 1146 GPPGKDGTSGHPGPIG----PPGPRG---NRGERGSEGSPGHPGQPGPPGPPGAP 1193



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 66/250 (26%), Positives = 82/250 (32%), Gaps = 56/250 (22%)

Query: 10   PSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQD 69
            P +  PR       +  P  PA   P  P   G  G  G  GAP                
Sbjct: 788  PGIAGPRGSPGERGETGPPGPAG-FPGAPGQNGEPGGKGERGAPGE-------------- 832

Query: 70   ARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGP---GFPPRLPRPFTSAS 126
                 +GEGG   V+  PG + PA      +  +G R  P GP   GFP     P    S
Sbjct: 833  -----KGEGGPPGVAGPPGGSGPAG-PPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGS 886

Query: 127  FSNQTRLRRRSASALPAPRLCPQRASP--------GCSSPGVRGPGGGASPRARGGNAAA 178
              N            P P   P +  P           SPGV GP G A      G+  A
Sbjct: 887  NGN---------PGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937

Query: 179  ALAARQAAGGGRSRSAFVAGRDAALACAQLPRR--PRGAGARRGMRRRLG-------AGE 229
                      G      +AG   A   A  P    PRG+   +G++   G       +GE
Sbjct: 938  ------QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGE 991

Query: 230  RPAPRPRGPP 239
            R  P P+G P
Sbjct: 992  RGPPGPQGLP 1001



 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 61/237 (25%), Positives = 74/237 (31%), Gaps = 46/237 (19%)

Query: 21  RGSQRVPQPPAARSPRG-PRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGG 79
           RGS   P PP      G P + G  G+ G  G+P      G       Q      +G  G
Sbjct: 326 RGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG-------QRGEPGPQGHAG 378

Query: 80  DLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLR----- 134
               + GP   P        +   G   +P  PG       P   A  +    LR     
Sbjct: 379 ----AQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPP-GPAGANGAPGLRGGAGE 433

Query: 135 --RRSASALPAPRLCPQRASPGCSS-PGVRGPGG-GASPRARGGNAAAALAARQAAGGGR 190
             +  A   P PR   +R   G    PG +G  G   SP   G N     A  + A G R
Sbjct: 434 PGKNGAKGEPGPR--GERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFR 491

Query: 191 SRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGAR 247
                             P  P G    +G      AGER AP P GP  A     R
Sbjct: 492 G-----------------PAGPNGIPGEKGP-----AGERGAPGPAGPRGAAGEPGR 526



 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 62/231 (26%), Positives = 75/231 (32%), Gaps = 46/231 (19%)

Query: 22  GSQRVPQPPAARSPRGPRA----GGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGE 77
           G+  VP     R P GP       G  GD G GGAP      G              RG 
Sbjct: 750 GADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGP-------------RGS 796

Query: 78  GGDLQVSSGPGAA--PPAEFRASARSAQGSRDVPA--GPGFPPRLPRPFTSASFSNQTRL 133
            G+   +  PG A  P A  +      +G R  P   G G PP +  P            
Sbjct: 797 PGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGP------------ 844

Query: 134 RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGG--GRS 191
                 + PA    PQ       SPG  GPG    P ARG      L     + G  G  
Sbjct: 845 ---PGGSGPAGPPGPQGVKGERGSPG--GPGAAGFPGARG------LPGPPGSNGNPGPP 893

Query: 192 RSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAP 242
             +   G+D     A     P   G           GE+ +P  +GPP AP
Sbjct: 894 GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAP 944



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 64/241 (26%), Positives = 74/241 (30%), Gaps = 39/241 (16%)

Query: 27  PQPPAA--RSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-V 83
           PQPP A  R P G    G  GD G  G P R    G       Q       G  G  +  
Sbjct: 89  PQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPG----IPGQPGSPGSPGPPGICESC 144

Query: 84  SSGPGAAPPA--EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASAL 141
            +GP    P    +   +  A G      GP  PP  P P                 S  
Sbjct: 145 PTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP--------------PGTSGH 190

Query: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
           P     P    P    PG  GP G   P    G +  A    ++   GR     + G   
Sbjct: 191 PGSPGSPGYQGPP-GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPG 249

Query: 202 ALACAQLPRRP-----RGAGARRGMRRRLGA----------GERPAPRPRGPPRAPARGA 246
               A +P  P     RG   R G +   GA          GE  AP P GP  AP    
Sbjct: 250 IKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERG 309

Query: 247 R 247
           R
Sbjct: 310 R 310



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 66/233 (28%), Positives = 72/233 (30%), Gaps = 39/233 (16%)

Query: 29   PPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCF-----GRGEGGDLQV 83
            PP    P  P   G  G  G  G    R   GG  A  +  AR         G  G    
Sbjct: 838  PPGVAGP--PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGP 895

Query: 84   SSGPGA-APPAEFRASARSAQGSRDV--PAG----------PGF--PPRLPRPFTSASFS 128
            S  PG   PP    A    A GS  V  P G          PG   PP  P P   A  +
Sbjct: 896  SGSPGKDGPPGP--AGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGIT 953

Query: 129  NQTRLRRRSASALPAPRLC--PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAA 186
                L       +P PR    PQ        PG  G  G   P    G    A  A +  
Sbjct: 954  GARGL--AGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG 1011

Query: 187  GGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPA-PRPRGP 238
              G   S  + GRD +         P G G  RG     GA   P  P P GP
Sbjct: 1012 RDGNPGSDGLPGRDGS---------PGGKG-DRGENGSPGAPGAPGHPGPPGP 1054



 Score = 35.0 bits (79), Expect = 0.063
 Identities = 64/249 (25%), Positives = 79/249 (31%), Gaps = 36/249 (14%)

Query: 2   PFSFQVQHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGG 61
           P ++  Q+ S        + G    P P     P GP   G  G  G  G+P        
Sbjct: 148 PQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPP--GTSGHPGSPGSP-------- 197

Query: 62  CWARAYQDARCFGRGEGGDLQVSSGPG-------AAPPAEFRASARSAQ-GSRDVPAGPG 113
                YQ       GE G    S  PG       + P  +   S R  + G R +P  PG
Sbjct: 198 ----GYQGPP----GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPG 249

Query: 114 F--PPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCS-SPGVRGPGGGASPR 170
              P  +P  F           R        AP L  +   PG + +PG  GP G    R
Sbjct: 250 IKGPAGIPG-FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGER 308

Query: 171 ARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGER 230
            R G   AA A       G   S    G       A  P  P   GA+  +      G  
Sbjct: 309 GRPGLPGAAGA---RGNDGARGSDGQPGPPGPPGTAGFPGSP---GAKGEVGPAGSPGSN 362

Query: 231 PAPRPRGPP 239
            AP  RG P
Sbjct: 363 GAPGQRGEP 371



 Score = 33.9 bits (76), Expect = 0.14
 Identities = 61/249 (24%), Positives = 73/249 (29%), Gaps = 41/249 (16%)

Query: 21  RGSQRVPQPPAAR-------SPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCF 73
           RG   +P  P A+       SP  P A G  G AG  GAP  R   G       +     
Sbjct: 449 RGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG-EKGPAG 507

Query: 74  GRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRL 133
            RG  G     +GP  A     R       G R +P  PG P    +P    S     R 
Sbjct: 508 ERGAPGP----AGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRP 563

Query: 134 RRRSASA---------LPAPR-------LCPQRASPGCSSP-------GVRGPGGGASPR 170
                S           P P+          +R  PG   P       G  GP G   P 
Sbjct: 564 GPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPT 623

Query: 171 ARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGER 230
             GG+             G   +    G +        P  P   G         G G+ 
Sbjct: 624 GPGGDKGDTGPPGPQGLQGLPGTGGPPGENGK------PGEPGPKGDAGAPGAPGGKGDA 677

Query: 231 PAPRPRGPP 239
            AP  RGPP
Sbjct: 678 GAPGERGPP 686



 Score = 29.6 bits (65), Expect = 2.7
 Identities = 54/182 (29%), Positives = 62/182 (34%), Gaps = 25/182 (13%)

Query: 22   GSQRVPQPPAARSPRGPRAGGG-GGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGD 80
            G+   P PP    P G     G  G AG  GAP      G   A   Q  R   +GE G+
Sbjct: 1044 GAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAP---GPAGSRGAPGPQGPRG-DKGETGE 1099

Query: 81   LQVSS--------GPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTR 132
               +         G   AP +   A  + A GS   PAGP  P     P      S    
Sbjct: 1100 RGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPG-PAGPRGPVGPSGPPGKDGTSGHP- 1157

Query: 133  LRRRSASALPAPR-LCPQRASPGC----SSPGVRGPGGGASPRARG-GNAAAALAARQAA 186
                     P PR    +R S G       PG  GP G   P   G G AA A    + A
Sbjct: 1158 ----GPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKA 1213

Query: 187  GG 188
            GG
Sbjct: 1214 GG 1215


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,712,692
Number of Sequences: 37866
Number of extensions: 1040512
Number of successful extensions: 18078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 1380
Number of HSP's that attempted gapping in prelim test: 10111
Number of HSP's gapped (non-prelim): 6328
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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