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Search of human proteins with 239745684
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
sapiens]
(368 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo ... 751 0.0
gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo ... 650 0.0
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 644 0.0
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 44 2e-04
gi|239752728 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 44 2e-04
gi|239741092 PREDICTED: hypothetical protein XP_002342089 [Homo ... 44 2e-04
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 41 0.002
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 40 0.004
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 40 0.004
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 37 0.028
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 37 0.037
gi|154759255 collagen, type XXVIII precursor [Homo sapiens] 37 0.037
gi|238859651 pleckstrin homology domain containing family A memb... 36 0.048
gi|23510333 pygopus homolog 2 [Homo sapiens] 36 0.048
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 36 0.063
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens] 35 0.082
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 35 0.082
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 35 0.082
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 35 0.082
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 35 0.14
gi|216548056 cardiotrophin 1 isoform 2 [Homo sapiens] 35 0.14
gi|4503121 cardiotrophin 1 isoform 1 [Homo sapiens] 35 0.14
gi|13375756 occludin/ELL domain containing 1 [Homo sapiens] 35 0.14
gi|239755585 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
>gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
sapiens]
Length = 368
Score = 751 bits (1939), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 1 MARSFMFIVGVAVESLGCTGVKLRDKSGLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAA 60
MARSFMFIVGVAVESLGCTGVKLRDKSGLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAA
Sbjct: 1 MARSFMFIVGVAVESLGCTGVKLRDKSGLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAA 60
Query: 61 LGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVM 120
LGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVM
Sbjct: 61 LGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVM 120
Query: 121 RTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLL 180
RTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLL
Sbjct: 121 RTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLL 180
Query: 181 QQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQ 240
QQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQ
Sbjct: 181 QQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQ 240
Query: 241 VRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDP 300
VRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDP
Sbjct: 241 VRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDP 300
Query: 301 PFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAGAWVEEKRSGE 360
PFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAGAWVEEKRSGE
Sbjct: 301 PFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAGAWVEEKRSGE 360
Query: 361 GSRKRLES 368
GSRKRLES
Sbjct: 361 GSRKRLES 368
>gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
sapiens]
Length = 325
Score = 650 bits (1678), Expect = 0.0
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 51 AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA 110
AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA
Sbjct: 8 AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA 67
Query: 111 GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 170
GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG
Sbjct: 68 GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 127
Query: 171 RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 230
RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH
Sbjct: 128 RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 187
Query: 231 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 290
SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP
Sbjct: 188 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 247
Query: 291 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 350
TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG
Sbjct: 248 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 307
Query: 351 AWVEEKRSGEGSRKRLES 368
AWVEEKRSGEGSRKRLES
Sbjct: 308 AWVEEKRSGEGSRKRLES 325
>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
Length = 325
Score = 644 bits (1661), Expect = 0.0
Identities = 315/318 (99%), Positives = 316/318 (99%)
Query: 51 AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA 110
AVLGQLEQAALGQQALGAVVDILQGAGGP+QRGPRLRLGGSGTRQLQQAAATREGEEGEA
Sbjct: 8 AVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATREGEEGEA 67
Query: 111 GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 170
GGLSDQPGVMRTQGRTVGVAALHAR RASQRAGRHPVEAELGPAQRAVQQEQRARARAPG
Sbjct: 68 GGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 127
Query: 171 RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 230
RVPGGRPRLLQQSRPPLPRRHG QRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH
Sbjct: 128 RVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 187
Query: 231 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 290
SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP
Sbjct: 188 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 247
Query: 291 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 350
TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG
Sbjct: 248 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 307
Query: 351 AWVEEKRSGEGSRKRLES 368
AWVEEKRSGEGSRKRLES
Sbjct: 308 AWVEEKRSGEGSRKRLES 325
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 43.9 bits (102), Expect = 2e-04
Identities = 82/292 (28%), Positives = 110/292 (37%), Gaps = 40/292 (13%)
Query: 20 GVKLRDKSGLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAALGQQALGA--VVDILQGAG 77
GV++ + G+ R G R G V Q + GQ ALG V+ ++G G
Sbjct: 322 GVQIEE--GVAVHRAGGCRRGGGRRCGHVRVGVREQASERGHGQ-ALGGQDVLLEVEGQG 378
Query: 78 GPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVR 137
G + G LR G G + QA T G Q G GR G A H ++
Sbjct: 379 GRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-HASGRHAGEGAPHGKLA 432
Query: 138 ASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRH------ 191
Q R PVE L R + E AR A G+V GGR RL ++ R L R
Sbjct: 433 GVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHRERREGLLARERARLFH 488
Query: 192 -------GHQRPVVLRVRAVHP-----SLQVCHLGEGLPSGEGEDGAEGSHSLDE---CP 236
++ P +LR +A + G GE + G H L
Sbjct: 489 LGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERDAGLGRPHQLIHDRLGQ 548
Query: 237 PSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQ-GSRLLPD 287
+RQ R+ + Q G E QH + RR P R + GSRL P+
Sbjct: 549 GARQRERRRAVGRQRQRG-EERRLVTQHRAHGEVRR--PKREERAGSRLAPE 597
>gi|239752728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 43.9 bits (102), Expect = 2e-04
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 41 GSDYDRPGEPAVLGQLEQAALGQQA-LGAVVDILQGA-----GGP------DQRGPRLRL 88
G++ +PGE GQ LG L ++V++ QG G P + P LRL
Sbjct: 81 GANAGKPGEKGSHGQKNSLHLGMPGGLDSIVEVCQGTAKLVHGHPHIVQEEEAVMPELRL 140
Query: 89 GGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG--VAALHARVRASQR-AGRH 145
G LQ+ + EGE GE G +D+ G QG V V LH + Q+ GR
Sbjct: 141 G------LQEVSQGTEGEVGERGKDNDEEG----QGVWVSPEVHGLHKEGQPQQQYQGRQ 190
Query: 146 PVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRH 191
V ++ V EQRA APG + RP R P RRH
Sbjct: 191 QVGPDIHGL--VVLLEQRAEIEAPGLMQ--RPVARIDVRLPEERRH 232
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 43.9 bits (102), Expect = 2e-04
Identities = 82/292 (28%), Positives = 110/292 (37%), Gaps = 40/292 (13%)
Query: 20 GVKLRDKSGLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAALGQQALGA--VVDILQGAG 77
GV++ + G+ R G R G V Q + GQ ALG V+ ++G G
Sbjct: 179 GVQIEE--GVAVHRAGGCRRGGGRRCGHVRVGVREQASERGHGQ-ALGGQDVLLEVEGQG 235
Query: 78 GPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVR 137
G + G LR G G + QA T G Q G GR G A H ++
Sbjct: 236 GRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-HASGRHAGEGAPHGKLA 289
Query: 138 ASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRH------ 191
Q R PVE L R + E AR A G+V GGR RL ++ R L R
Sbjct: 290 GVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHRERREGLLARERARLFH 345
Query: 192 -------GHQRPVVLRVRAVHP-----SLQVCHLGEGLPSGEGEDGAEGSHSLDE---CP 236
++ P +LR +A + G GE + G H L
Sbjct: 346 LGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERDAGLGRPHQLIHDRLGQ 405
Query: 237 PSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQ-GSRLLPD 287
+RQ R+ + Q G E QH + RR P R + GSRL P+
Sbjct: 406 GARQRERRRAVGRQRQRG-EERRLVTQHRAHGEVRR--PKREERAGSRLAPE 454
>gi|239741092 PREDICTED: hypothetical protein XP_002342089 [Homo
sapiens]
Length = 246
Score = 43.9 bits (102), Expect = 2e-04
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 41 GSDYDRPGEPAVLGQLEQAALGQQA-LGAVVDILQGA-----GGP------DQRGPRLRL 88
G++ +PGE GQ LG L ++V++ QG G P + P LRL
Sbjct: 81 GANAGKPGEKGSHGQKNSLHLGMPGGLDSIVEVCQGTAKLVHGHPHIVQEEEAVMPELRL 140
Query: 89 GGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG--VAALHARVRASQR-AGRH 145
G LQ+ + EGE GE G +D+ G QG V V LH + Q+ GR
Sbjct: 141 G------LQEVSQGTEGEVGERGKDNDEEG----QGVWVSPEVHGLHKEGQPQQQYQGRQ 190
Query: 146 PVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRH 191
V ++ V EQRA APG + RP R P RRH
Sbjct: 191 QVGPDIHGL--VVLLEQRAEIEAPGLMQ--RPVARIDVRLPEERRH 232
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 42.4 bits (98), Expect = 7e-04
Identities = 55/173 (31%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 20 GVKLRDKSGLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAALGQQALGA--VVDILQGAG 77
GV++ + G+ R G R G V Q + GQ ALG V+ ++G G
Sbjct: 179 GVQIEE--GVAVHRAGGCRRGGGRRCGHVRVGVREQASERGHGQ-ALGGQDVLLEVEGQG 235
Query: 78 GPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVR 137
G + G LR G G + QA T G Q G GR G A H ++
Sbjct: 236 GRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-HASGRHAGEGAPHGKLA 289
Query: 138 ASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRR 190
Q R PVE L R + E AR A G+V GGR RL ++ R L R
Sbjct: 290 GVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHRERREGLLAR 338
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 41.2 bits (95), Expect = 0.001
Identities = 80/289 (27%), Positives = 104/289 (35%), Gaps = 53/289 (18%)
Query: 17 GCTGVKLRDKSGLETQRVFGNRSHGSDYDRP-GEPAVLGQLEQAALGQQALGAVVDILQG 75
GC G + R G++ QR SH + RP GE + L + +A +
Sbjct: 253 GCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAH 312
Query: 76 AGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHAR 135
A P + RLGG G R +P V++ RT L
Sbjct: 313 ASPPSLAAAQWRLGG-GKR---------------------KPTVLKGAVRT----DLSTA 346
Query: 136 VRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRP-RLLQQSRPPLPRRHGHQ 194
R+GR L PAQ + E ARA G G R ++RP P G
Sbjct: 347 EEEDPRSGR-----ALEPAQGS---ELWARAERHGGSSGARTLPTPSRARPGKPAPRGSA 398
Query: 195 RPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTG 254
P LR L +G G G G + G+H+L +R+ R P P G G
Sbjct: 399 PPARLRGGGGGSGLTQL-VGSG--RGSGVTHSVGTHAL----ATRRGSRAPR-PVGVLRG 450
Query: 255 VEPPHH------AAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPG 297
V PH A Q PPR+ + R F R L RL P PG
Sbjct: 451 V--PHFRPLSSPAPQSPPRSPSVRAFGPR-LGAGRLSCPQAPRAAALPG 496
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 41.2 bits (95), Expect = 0.001
Identities = 80/289 (27%), Positives = 104/289 (35%), Gaps = 53/289 (18%)
Query: 17 GCTGVKLRDKSGLETQRVFGNRSHGSDYDRP-GEPAVLGQLEQAALGQQALGAVVDILQG 75
GC G + R G++ QR SH + RP GE + L + +A +
Sbjct: 253 GCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAH 312
Query: 76 AGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHAR 135
A P + RLGG G R +P V++ RT L
Sbjct: 313 ASPPSLAAAQWRLGG-GKR---------------------KPTVLKGAVRT----DLSTA 346
Query: 136 VRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRP-RLLQQSRPPLPRRHGHQ 194
R+GR L PAQ + E ARA G G R ++RP P G
Sbjct: 347 EEEDPRSGR-----ALEPAQGS---ELWARAERHGGSSGARTLPTPSRARPGKPAPRGSA 398
Query: 195 RPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTG 254
P LR L +G G G G + G+H+L +R+ R P P G G
Sbjct: 399 PPARLRGGGGGSGLTQL-VGSG--RGSGVTHSVGTHAL----ATRRGSRAPR-PVGVLRG 450
Query: 255 VEPPHH------AAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPG 297
V PH A Q PPR+ + R F R L RL P PG
Sbjct: 451 V--PHFRPLSSPAPQSPPRSPSVRAFGPR-LGAGRLSCPQAPRAAALPG 496
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 40.8 bits (94), Expect = 0.002
Identities = 57/230 (24%), Positives = 73/230 (31%), Gaps = 44/230 (19%)
Query: 89 GGSGTRQLQQAAATREGEEGEAGGL-SDQPGVMRTQGRTVGVAALHARVRASQRAGRHPV 147
GGSG Q R G G+ G +PG + + R +A+ A P
Sbjct: 304 GGSGWGSPQ-----RNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPA 358
Query: 148 EAELGPAQRAVQQEQRARARAPG----RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 203
+ P+ R+ Q RA G R R R +S PRR G +RP R
Sbjct: 359 RGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRG 418
Query: 204 VHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPH---- 259
SL SG G G G + G E H
Sbjct: 419 SSRSLSRARSSSDSGSGRGAPGP-----------------------GPEPGSERGHGGHG 455
Query: 260 -HAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDPPFAGPSAW 308
A + PPRA+ P G G R P EG+ P P +W
Sbjct: 456 KRAKERPPRARPASTSPSPGAHGRRGGP------EGKSSSRSPGPHPRSW 499
Score = 28.9 bits (63), Expect = 7.7
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 76 AGGPDQRG---PRLRLGGSGTRQLQQAAATREGEEGE-AGGLSDQPGVMRTQGRTVGVAA 131
A P +RG PR +R L +A ++ + G A G +PG R G
Sbjct: 400 ASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGG------ 453
Query: 132 LHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRR 190
H + RA +R R A P+ A + ++ R PG PR SR P R
Sbjct: 454 -HGK-RAKERPPRAR-PASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSR 509
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 39.7 bits (91), Expect = 0.004
Identities = 74/324 (22%), Positives = 108/324 (33%), Gaps = 82/324 (25%)
Query: 47 PGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGT-------RQLQQA 99
P + ++ QQ GA+ G GGP G GG+ QL +
Sbjct: 252 PPSSSASASSSSSSFAQQRFGAM-----GGGGPSAAG-----GGTPQPTATPTLNQLLTS 301
Query: 100 AATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQ 159
++ G +G GG D G + G G A + ASQ G A A Q
Sbjct: 302 PSSARGYQGYPGG--DYSGGPQDGGAGKGPADM-----ASQCWGAAAAAAAAAAASGGAQ 354
Query: 160 QEQRARARAPGRVPGG--------------------RPR-------LLQQSRPPLPRRHG 192
Q +PG GG RP+ QQ PP + G
Sbjct: 355 QRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQG 414
Query: 193 H-------------QRPVVLRVRA------VHPSLQVCHLGEGLPSGEGEDG------AE 227
H + P+ ++ RA + + Q+ G+ PSG G+ G +
Sbjct: 415 HGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQ 474
Query: 228 GSHSLDECPPSRQ--VRRQPHIPFGF--QTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 283
H + PP Q + PH + Q +PP + PP +Q P + Q
Sbjct: 475 SPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ--QSPA 532
Query: 284 LLPDLLPTGEGRPGEDPPFAGPSA 307
P T + P PP++ P A
Sbjct: 533 PYPSQQSTTQQHPQSQPPYSQPQA 556
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 39.7 bits (91), Expect = 0.004
Identities = 74/324 (22%), Positives = 108/324 (33%), Gaps = 82/324 (25%)
Query: 47 PGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGT-------RQLQQA 99
P + ++ QQ GA+ G GGP G GG+ QL +
Sbjct: 252 PPSSSASASSSSSSFAQQRFGAM-----GGGGPSAAG-----GGTPQPTATPTLNQLLTS 301
Query: 100 AATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQ 159
++ G +G GG D G + G G A + ASQ G A A Q
Sbjct: 302 PSSARGYQGYPGG--DYSGGPQDGGAGKGPADM-----ASQCWGAAAAAAAAAAASGGAQ 354
Query: 160 QEQRARARAPGRVPGG--------------------RPR-------LLQQSRPPLPRRHG 192
Q +PG GG RP+ QQ PP + G
Sbjct: 355 QRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQG 414
Query: 193 H-------------QRPVVLRVRA------VHPSLQVCHLGEGLPSGEGEDG------AE 227
H + P+ ++ RA + + Q+ G+ PSG G+ G +
Sbjct: 415 HGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQ 474
Query: 228 GSHSLDECPPSRQ--VRRQPHIPFGF--QTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 283
H + PP Q + PH + Q +PP + PP +Q P + Q
Sbjct: 475 SPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ--QSPA 532
Query: 284 LLPDLLPTGEGRPGEDPPFAGPSA 307
P T + P PP++ P A
Sbjct: 533 PYPSQQSTTQQHPQSQPPYSQPQA 556
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 39.3 bits (90), Expect = 0.006
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 45 DRPG--EPAVLGQL-----------EQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGS 91
DR G +PA +GQ+ ++ ALG QALG + + G G RG R +G +
Sbjct: 126 DRGGRLDPAGIGQVLGLGVLGGAGRQRRALGGQALGLLAQV--GIGAGHARGGRGAVGPA 183
Query: 92 GTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVA----ALHARVRASQRAGRHPV 147
G + + AA G AG + + GV+ + + + LHAR R ++ GR
Sbjct: 184 GQHRARLGAAVL---RGTAGAPARRVGVVAERAASAACSLQRQRLHARRRVREQRGR--- 237
Query: 148 EAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 203
V +E R R GR + +P + RRH +P + R RA
Sbjct: 238 ----------VAREVRGRVIGRGR----------EVQPVVGRRH---KPALRRGRA 270
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 39.3 bits (90), Expect = 0.006
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 45 DRPG--EPAVLGQL-----------EQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGS 91
DR G +PA +GQ+ ++ ALG QALG + + G G RG R +G +
Sbjct: 126 DRGGRLDPAGIGQVLGLGVLGGAGRQRRALGGQALGLLAQV--GIGAGHARGGRGAVGPA 183
Query: 92 GTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVA----ALHARVRASQRAGRHPV 147
G + + AA G AG + + GV+ + + + LHAR R ++ GR
Sbjct: 184 GQHRARLGAAVL---RGTAGAPARRVGVVAERAASAACSLQRQRLHARRRVREQRGR--- 237
Query: 148 EAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 203
V +E R R GR + +P + RRH +P + R RA
Sbjct: 238 ----------VAREVRGRVIGRGR----------EVQPVVGRRH---KPALRRGRA 270
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 37.0 bits (84), Expect = 0.028
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 40 HGSDYDRPGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRL--------GGS 91
HG P + + ++ A+ GQ+ +D++ G G RG L++
Sbjct: 182 HGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWG---RGKELKILVLLLLPVQSG 238
Query: 92 GTRQLQQAAATREGEEGEAGGLSDQP-GVMRTQG-RTVGVAALHARVRASQRAGRHPVEA 149
RQ++Q + E G+ + P GV G R G AA R + + A +
Sbjct: 239 QQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQ 298
Query: 150 ELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHG 192
PA+R+ + + A RAP R P R + P PRR G
Sbjct: 299 ---PAERSRGEPRPAEPRAPPRPPPA-ARRPPPATAPSPRRAG 337
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 36.6 bits (83), Expect = 0.037
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 40 HGSDYDRPGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRL--------GGS 91
HG P + + ++ A+ GQ+ +D++ G G RG L++
Sbjct: 182 HGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWG---RGKELKILVLLLLPVQSG 238
Query: 92 GTRQLQQAAATREGEEGEAGGLSDQP-GVMRTQG-RTVGVAALHARVRASQRAGRHPVEA 149
RQ++Q + E G+ + P GV G R G AA R + + A +
Sbjct: 239 QQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQ 298
Query: 150 ELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVH 205
PA+R+ + + A RAP R P R PP P RP LR R H
Sbjct: 299 ---PAERSRGEPRPAEPRAPPRPPPAARR-----PPPPPAPGAPARP--LRGRRSH 344
>gi|154759255 collagen, type XXVIII precursor [Homo sapiens]
Length = 1125
Score = 36.6 bits (83), Expect = 0.037
Identities = 72/289 (24%), Positives = 107/289 (37%), Gaps = 57/289 (19%)
Query: 28 GLETQRVFGNRSHGSDYDRPGEPAVLGQLEQAALGQQALGAVVDI--LQGAGGPDQRGPR 85
G+ Q + G R RPG P +G E G + V L G G P +G +
Sbjct: 358 GIGQQGIKGERGQEG---RPGAPGPIGVGEPGQPGPRGPEGVPGERGLPGEGFPGPKGEK 414
Query: 86 LRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRH 145
G +G + LQ + +GE+G+ G + Q +G+ + ++ G
Sbjct: 415 GSEGPTGPQGLQGLSI--KGEKGDIGPVGPQG--------PMGIPGIGSQ-------GEQ 457
Query: 146 PVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVH 205
++ +GP + A +PG + + Q P PR PV + V+
Sbjct: 458 GIQGPIGPPG--------PQGPAGQGLPGSKGEVGQMG-PTGPRG-----PVGIGVQG-- 501
Query: 206 PSLQVCHLG-EGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQH 264
P + +G G P GEDGA G P +R G E P Q
Sbjct: 502 PKGEPGSIGLPGQPGVPGEDGAAGKKGEAGLPGAR--------------GPEGPPGKGQP 547
Query: 265 PPRAQTRRLFPLRGLQGSRLLPDLLPTG-EGRPGEDPPFAGPSAWLHVP 312
P+ + +G QG R LP P G +G PG PF P + P
Sbjct: 548 GPKGDEGKK-GSKGNQGQRGLPG--PEGPKGEPGIMGPFGMPGTSIPGP 593
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 36.2 bits (82), Expect = 0.048
Identities = 52/169 (30%), Positives = 64/169 (37%), Gaps = 24/169 (14%)
Query: 53 LGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGG 112
LG + QQ L V D L G GGP Q+ P S + LQ ++ E+
Sbjct: 471 LGSPQDRVSAQQQLWMVEDTLAGLGGP-QKPPPHTEPDSPSPVLQGEESSERESLPESLE 529
Query: 113 LSDQPGVMRTQGRTVG----VAALHARV------RASQRAGRHPVEAELG-------PAQ 155
LS GR G +A+ H + RAS GRH +LG P
Sbjct: 530 LSSPRSPETDWGRPPGGDKDLASPHLGLGSPRVSRASSPEGRHLPSPQLGTKAPVARPRM 589
Query: 156 RAVQQEQRARARAPGRVPGGR---PRLLQQSRPPLPRRHG---HQRPVV 198
A +Q +R R P R PRLL R P R QRPVV
Sbjct: 590 SAQEQLERMRRNQECGRPFPRPTSPRLLTLGRTLSPARRQPDVEQRPVV 638
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 36.2 bits (82), Expect = 0.048
Identities = 74/323 (22%), Positives = 105/323 (32%), Gaps = 56/323 (17%)
Query: 84 PRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRA----- 138
P +L G G A + ++G+AG P R + T G A H A
Sbjct: 8 PPDKLEGGGGPAPPPAPPSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLTEFAPPPTP 67
Query: 139 --SQRAGRHPVEAELGPAQRAVQQEQ-----------RARARAPGRVP-------GGRPR 178
+P E + G + V R + G+VP GG P+
Sbjct: 68 MVDHLVASNPFEDDFGAPKVGVAAPPFLGSPVPFGGFRVQGGMAGQVPPGYSTGGGGGPQ 127
Query: 179 LLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSL----DE 234
L++ PP P + P+ + G G P + + +
Sbjct: 128 PLRRQPPPFPPN------------PMGPAFNMPPQGPGYPPPGNMNFPSQPFNQPLGQNF 175
Query: 235 CPPSRQVRRQPHIPFG--FQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRL------LP 286
PPS Q+ P FG + P A PP R P S L LP
Sbjct: 176 SPPSGQMMPGPVGGFGPMISPTMGQPPRAELGPPSLSQRFAQPGAPFGPSPLQRPGQGLP 235
Query: 287 DLLPTGEGRPGEDPPFAGPSAW-----LHVPLFWSLLERPRPILRLAYLEGRR--FPWNA 339
L P PG DP F GP L+ P + + P A + G + FP N+
Sbjct: 236 SLPPNTSPFPGPDPGFPGPGGEDGGKPLNPPASTAFPQEPHSGSPAAAVNGNQPSFPPNS 295
Query: 340 GLRPGSAARAGAWVEEKRSGEGS 362
R G A + ++G GS
Sbjct: 296 SGRGGGTPDANSLAPPGKAGGGS 318
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 35.8 bits (81), Expect = 0.063
Identities = 58/208 (27%), Positives = 77/208 (37%), Gaps = 37/208 (17%)
Query: 87 RLGGSGTRQLQQAAATREGEEGEAG-GLSDQPGVMRTQGRTVGVAALHARVRASQRAGRH 145
+ GGSG Q QQ ++ ++ A G + G R G T A +GR
Sbjct: 2305 KAGGSGPPQQQQQQQQQQQQQAVARPGRAATSGPRRYPGPTAEPLAGDRPPTGGHSSGRS 2364
Query: 146 P-VEAEL-GPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 203
P +E + GPA+ + RA R P P + + PP PR HG+ R
Sbjct: 2365 PRMERRVPGPAR---SESPRACRHGGARWPASGPHVSEG--PPGPRHHGYYRG------- 2412
Query: 204 VHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQ 263
+G SG GE+ G++ D PP R H G TG P A
Sbjct: 2413 -----SDYDEADGPGSGGGEEAMAGAY--DAPPPVR------HASSG-ATGRSPRTPRAS 2458
Query: 264 HP----PRAQTRRL----FPLRGLQGSR 283
P P RRL +P GL R
Sbjct: 2459 GPACASPSRHGRRLPNGYYPAHGLARPR 2486
>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
Length = 358
Score = 35.4 bits (80), Expect = 0.082
Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 8/131 (6%)
Query: 93 TRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHAR------VRASQRAGR-H 145
+RQ ++A A G GG D PG G V H A GR
Sbjct: 85 SRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLE 144
Query: 146 PVEAELG-PAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAV 204
P+ +G PA R + +Q R + Q PP P H H P + A
Sbjct: 145 PLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAP 204
Query: 205 HPSLQVCHLGE 215
H Q+ H G+
Sbjct: 205 HLQFQIAHCGQ 215
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 35.4 bits (80), Expect = 0.082
Identities = 59/206 (28%), Positives = 75/206 (36%), Gaps = 40/206 (19%)
Query: 36 GNRSHGSDYDRPGEPAVLGQL----EQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGS 91
G + PG P G E LG+ L V + G P GP R+G
Sbjct: 527 GEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAP 586
Query: 92 GTRQLQQAAATREGEEGEAG--GLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEA 149
G + + TR GE+GE G G +PG QGR S AG +
Sbjct: 587 GLQGERGEKGTR-GEKGERGLDGFPGKPGDTGQQGRP----------GPSGVAGPQGEKG 635
Query: 150 ELGPA------QRAVQQE-QRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVR 202
++GPA VQQE + APG P G Q P P G + P+ R
Sbjct: 636 DVGPAGPPGVPGSVVQQEGLKGEQGAPG--PRG-----HQGAPGPP---GARGPIGPEGR 685
Query: 203 AVHPSLQVCHLGEGLPSGEGEDGAEG 228
P LQ GL +G+ G G
Sbjct: 686 DGPPGLQ------GLRGKKGDMGPPG 705
Score = 31.2 bits (69), Expect = 1.5
Identities = 43/156 (27%), Positives = 59/156 (37%), Gaps = 15/156 (9%)
Query: 77 GGPDQRGPRLRLGGSGTRQL--QQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 134
G P +RG G G R +Q A R GE+GEA GL PG +G G
Sbjct: 768 GEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEA-GLPGAPGFPGVRGEK-GDQGEKG 825
Query: 135 RVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQ 194
+ G + E GPA + R+PG + ++ P LP G Q
Sbjct: 826 ELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQ 885
Query: 195 -RPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGS 229
RP L + G P +G++GA G+
Sbjct: 886 GRPGELGPQG----------PTGPPGAKGQEGAHGA 911
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 35.4 bits (80), Expect = 0.082
Identities = 47/164 (28%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 124 GRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQS 183
G V +A L R + QR EL QR E+ +R+P R GRPR + S
Sbjct: 1410 GMRVRLAELQRRYKEKQR--------ELARLQRKHDHERDESSRSPARRGPGRPRKRKHS 1461
Query: 184 ------RP--PLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDEC 235
RP PLPR G +V+AV SL + L L G G + A+ L+
Sbjct: 1462 SSLPAPRPTGPLPRSDGK------KVKAVRTSLGL--LCAELRGGSGGEPAKKRSKLERS 1513
Query: 236 P----PSRQVRRQPHIPFGFQTGVEP--PHHAAQHPPRAQTRRL 273
+ V + Q G+ P H AQ P+ +++ L
Sbjct: 1514 VYAGLQTASVEKAQCKKSSCQGGLAPSVAHRVAQLKPKVKSKGL 1557
Score = 29.3 bits (64), Expect = 5.9
Identities = 39/130 (30%), Positives = 47/130 (36%), Gaps = 27/130 (20%)
Query: 47 PGEPAVLG--QLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGG----SGTRQLQQAA 100
PGEP LE+ L A A D L P +RGP+ + G ++LQ AA
Sbjct: 1103 PGEPPPCSPRSLEEPGLLSGAREATQD-LAATPYPTERGPQGKAADPSPLEGLQELQCAA 1161
Query: 101 ATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQ 160
EAGG TQG R R E E GP+ A Q
Sbjct: 1162 LL------EAGGPEATGQAHSTQG--------------GAREERSREEGEQGPSSGASSQ 1201
Query: 161 EQRARARAPG 170
RA +PG
Sbjct: 1202 VLEQRAGSPG 1211
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 35.4 bits (80), Expect = 0.082
Identities = 42/165 (25%), Positives = 54/165 (32%), Gaps = 33/165 (20%)
Query: 75 GAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 134
GA G + GP G G + + AA + EAGG G + G H
Sbjct: 32 GAAGGEAEGPE---GSEGAEEAPRGAAAVK----EAGGGGPDRG---PEAEARGTRGAHG 81
Query: 135 RVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRP-----PLPR 189
A + A P AE+ Q+ +PGR G PR Q P P +
Sbjct: 82 ETEAEEGA---PEGAEVPQGGEETSGAQQVEGASPGRGAQGEPRGEAQREPEDSAAPERQ 138
Query: 190 RHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDE 234
QRP V EG SGE D + L +
Sbjct: 139 EEAEQRPEV---------------PEGSASGEAGDSVDAEGPLGD 168
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 34.7 bits (78), Expect = 0.14
Identities = 47/182 (25%), Positives = 59/182 (32%), Gaps = 27/182 (14%)
Query: 79 PDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ-PGVMRTQGRTVGVAALHARVR 137
P + P L+L G T Q A +G+ A S PG R + R G
Sbjct: 716 PCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPG------ 769
Query: 138 ASQRAGRHPVEAELGPAQRAVQQEQRARA-RAPGRVPGGRPRLLQQSRPPLPRRHGHQRP 196
G GP +RA + R R + GGR RL R + R G +R
Sbjct: 770 ----PGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRR--VRRESGRRRA 823
Query: 197 VVLRVRAVHPSLQVCHLGEG-------------LPSGEGEDGAEGSHSLDECPPSRQVRR 243
A+ + GE LPS A GS L PSR R
Sbjct: 824 GATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPR 883
Query: 244 QP 245
P
Sbjct: 884 GP 885
Score = 30.0 bits (66), Expect = 3.4
Identities = 43/163 (26%), Positives = 58/163 (35%), Gaps = 22/163 (13%)
Query: 42 SDYDRPGEPAVLGQLEQAALGQQALGAVVDILQGAG-GPDQRGPRLRLGGSGTRQLQQAA 100
+D RP P G+ A G G G+G G ++ GP R + TR +
Sbjct: 744 TDRARPWSPPAPGESRDRARGAGQPGP------GSGSGAERAGPERRARDTQTRTRRDKL 797
Query: 101 ATREGEEGEAGGLSDQPGVMRTQGRT-VGVAALHARVRASQRA----GRHPVEAELG--- 152
+ G L+ V R GR G + A RA+ RA R P+ A
Sbjct: 798 T--DSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRP 855
Query: 153 -----PAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRR 190
A R+ + RA P R P Q+ P PRR
Sbjct: 856 ALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRR 898
>gi|216548056 cardiotrophin 1 isoform 2 [Homo sapiens]
Length = 200
Score = 34.7 bits (78), Expect = 0.14
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 47 PGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPR 85
P P +L +LE AA +ALGA V+ L A G RGPR
Sbjct: 112 PRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPR 150
>gi|4503121 cardiotrophin 1 isoform 1 [Homo sapiens]
Length = 201
Score = 34.7 bits (78), Expect = 0.14
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 47 PGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPR 85
P P +L +LE AA +ALGA V+ L A G RGPR
Sbjct: 113 PRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPR 151
>gi|13375756 occludin/ELL domain containing 1 [Homo sapiens]
Length = 264
Score = 34.7 bits (78), Expect = 0.14
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 5/158 (3%)
Query: 168 APGRVPGGRPRLL-QQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGA 226
+P PG + L Q +R P P R GH P R A P C +P+ E
Sbjct: 9 SPTADPGSELQTLGQAARRPPPPRAGHDAPRRTRPSARKP--LSCFSRRPMPTREPPKTR 66
Query: 227 EGSHSLDECPPSRQVRRQPHIPFGFQTGV-EPPHHAAQHPPRAQTRRLFPLRGLQGSRLL 285
L PP Q P G +T PP P +A+T+++ L LL
Sbjct: 67 GSRGHLHTHPPGPGPPLQGLAPRGLKTSAPRPPCQPQPGPHKAKTKKIVFEDELLSQALL 126
Query: 286 PDLLPTGEGRPGEDP-PFAGPSAWLHVPLFWSLLERPR 322
P G G P P P L P S ER R
Sbjct: 127 GAKKPIGAIPKGHKPRPHPVPDYELKYPPVSSERERSR 164
>gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 34.3 bits (77), Expect = 0.18
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 40 HGSDYDRPGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRL--------GGS 91
HG P + + ++ A+ GQ+ +D++ G G RG L++
Sbjct: 182 HGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWG---RGKELKILVLLLLPVQSG 238
Query: 92 GTRQLQQAAATREGEEGEAGGLSDQP-GVMRTQG-RTVGVAALHARVRASQRAGRHPVEA 149
RQ++Q + E G+ + P GV G R G AA R + + A +
Sbjct: 239 QQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQ 298
Query: 150 ELGPAQRAVQQEQRARARAPGR-VPGGRPR 178
PA+R+ + + A RAP R P RP+
Sbjct: 299 ---PAERSRGEPRPAEPRAPPRPPPAARPQ 325
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,827,468
Number of Sequences: 37866
Number of extensions: 1064556
Number of successful extensions: 4063
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 3936
Number of HSP's gapped (non-prelim): 300
length of query: 368
length of database: 18,247,518
effective HSP length: 104
effective length of query: 264
effective length of database: 14,309,454
effective search space: 3777695856
effective search space used: 3777695856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.