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Search of human proteins with 239745650
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo
sapiens]
(484 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756667 PREDICTED: hypothetical protein [Homo sapiens] 994 0.0
gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo ... 994 0.0
gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo ... 994 0.0
gi|239754195 PREDICTED: hypothetical protein [Homo sapiens] 35 0.12
gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo ... 35 0.12
gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo ... 35 0.12
gi|22547204 hairless protein isoform a [Homo sapiens] 33 0.44
gi|22547207 hairless protein isoform b [Homo sapiens] 33 0.44
gi|223029463 fibrinogen C domain containing 1 [Homo sapiens] 33 0.76
gi|223029461 fibrinogen C domain containing 1 [Homo sapiens] 33 0.76
gi|85067503 arachidonate 15-lipoxygenase, second type isoform b ... 33 0.76
gi|85067499 arachidonate 15-lipoxygenase, second type isoform a ... 33 0.76
gi|85067501 arachidonate 15-lipoxygenase, second type isoform d ... 33 0.76
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 32 0.99
gi|169164530 PREDICTED: similar to hCG1818432 [Homo sapiens] 32 1.3
gi|169164924 PREDICTED: similar to hCG1818432 [Homo sapiens] 32 1.3
gi|169163549 PREDICTED: hypothetical protein LOC646960 [Homo sap... 32 1.3
gi|77681565 NG5 protein [Homo sapiens] 32 1.7
gi|24308115 interferon regulatory factor 2 binding protein 1 [Ho... 32 1.7
gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo sa... 32 1.7
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 32 1.7
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 32 1.7
gi|4507447 transcription factor AP-4 (activating enhancer bindin... 31 2.9
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 31 2.9
gi|93141049 collagen, type XII, alpha 1 short isoform precursor ... 30 3.8
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [... 30 3.8
gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] 30 3.8
gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens] 30 3.8
gi|54873613 agrin [Homo sapiens] 30 4.9
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 30 4.9
>gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 484
Score = 994 bits (2571), Expect = 0.0
Identities = 484/484 (100%), Positives = 484/484 (100%)
Query: 1 MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP
Sbjct: 1 MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
Query: 61 QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC
Sbjct: 61 QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
Query: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH
Sbjct: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
Query: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ
Sbjct: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
Query: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY
Sbjct: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
Query: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW
Sbjct: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
Query: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR
Sbjct: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
Query: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG
Sbjct: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
Query: 481 AACS 484
AACS
Sbjct: 481 AACS 484
>gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo
sapiens]
Length = 484
Score = 994 bits (2571), Expect = 0.0
Identities = 484/484 (100%), Positives = 484/484 (100%)
Query: 1 MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP
Sbjct: 1 MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
Query: 61 QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC
Sbjct: 61 QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
Query: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH
Sbjct: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
Query: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ
Sbjct: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
Query: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY
Sbjct: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
Query: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW
Sbjct: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
Query: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR
Sbjct: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
Query: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG
Sbjct: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
Query: 481 AACS 484
AACS
Sbjct: 481 AACS 484
>gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo
sapiens]
Length = 484
Score = 994 bits (2571), Expect = 0.0
Identities = 484/484 (100%), Positives = 484/484 (100%)
Query: 1 MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP
Sbjct: 1 MLWDHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGAAP 60
Query: 61 QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC
Sbjct: 61 QRTAQSPSPRVRGPGHTHLWKTAEQSAHTDVWLSNGNSTSPSLQSSHTKPLAWHRWGEQC 120
Query: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH
Sbjct: 121 GVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLH 180
Query: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ
Sbjct: 181 KMLPILELPSPSSRDALHRGGPLPPPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQ 240
Query: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY
Sbjct: 241 DTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVTPSMRLSVLCDFSLVLIY 300
Query: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW
Sbjct: 301 EAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVW 360
Query: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR
Sbjct: 361 LILIGVLQRLLELQPEVDESHHGILLLLRLLGQLQNHLLALLDRLPQLLDVRGQEQTLPR 420
Query: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG
Sbjct: 421 LGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
Query: 481 AACS 484
AACS
Sbjct: 481 AACS 484
>gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]
Length = 631
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178
Q GVG + R+G K HL V L G L E AQ + ++++ + L V
Sbjct: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495
Query: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233
+ + ++ P RD GG L P G+E L ++ QL+Q
Sbjct: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553
Query: 234 QAGLLSQD 241
A + D
Sbjct: 554 SAAVTGDD 561
>gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo
sapiens]
Length = 541
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178
Q GVG + R+G K HL V L G L E AQ + ++++ + L V
Sbjct: 346 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 405
Query: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233
+ + ++ P RD GG L P G+E L ++ QL+Q
Sbjct: 406 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 463
Query: 234 QAGLLSQD 241
A + D
Sbjct: 464 SAAVTGDD 471
>gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo
sapiens]
Length = 631
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178
Q GVG + R+G K HL V L G L E AQ + ++++ + L V
Sbjct: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495
Query: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233
+ + ++ P RD GG L P G+E L ++ QL+Q
Sbjct: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553
Query: 234 QAGLLSQD 241
A + D
Sbjct: 554 SAAVTGDD 561
>gi|22547204 hairless protein isoform a [Homo sapiens]
Length = 1189
Score = 33.5 bits (75), Expect = 0.44
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 405 LPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHP-EKETQPRGHR 463
+ Q+++ + QE+ L G G GP R L P+ RPR P +E QP R
Sbjct: 801 IAQVVERKIQEKAL---GPGLRAGPGLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPRR 857
Query: 464 GLAPGQERWQHGQ 476
G QE W+ GQ
Sbjct: 858 GFHLFQEHWRQGQ 870
>gi|22547207 hairless protein isoform b [Homo sapiens]
Length = 1134
Score = 33.5 bits (75), Expect = 0.44
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 405 LPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHP-EKETQPRGHR 463
+ Q+++ + QE+ L G G GP R L P+ RPR P +E QP R
Sbjct: 801 IAQVVERKIQEKAL---GPGLRAGPGLRKGLGLPLSPVRPRLPPPGALLWLQEPQPCPRR 857
Query: 464 GLAPGQERWQHGQ 476
G QE W+ GQ
Sbjct: 858 GFHLFQEHWRQGQ 870
>gi|223029463 fibrinogen C domain containing 1 [Homo sapiens]
Length = 461
Score = 32.7 bits (73), Expect = 0.76
Identities = 62/230 (26%), Positives = 87/230 (37%), Gaps = 43/230 (18%)
Query: 224 LAQLLQTRREQAGLLSQDTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVT 283
LA LL A L P PPP V A +S +V V A
Sbjct: 39 LAVLLAVAVTGAVLFLNHAHAPGTAPPPV----------VSTGAASANSALVTVERA--- 85
Query: 284 PSMRLSVLCDFSLVLIYEAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDA 343
S LS+L D + ++F R Q LQ L P L D L+ L D
Sbjct: 86 DSSHLSILIDPRCPDLTDSFARLESAQASVLQALTEHQAQPRL--VGDQEQELLDTLADQ 143
Query: 344 LALLLVKAVLKEHSDVWLILIGVL-------QRLLELQPEVDESHHGILLLLRLLGQLQN 396
L LL +A S++ +G+ Q L LQ E L++LL + Q
Sbjct: 144 LPRLLARA-----SELQTECMGLRKGHGTLGQGLSALQSEQGR-------LIQLLSESQG 191
Query: 397 HLLALLDRLPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLR-PIRRDRPR 445
H+ L++ + +LD +++ L R P ++ L R P R RPR
Sbjct: 192 HMAHLVNSVSDILDALQRDRGLGR--------PRNKADLQRAPARGTRPR 233
>gi|223029461 fibrinogen C domain containing 1 [Homo sapiens]
Length = 461
Score = 32.7 bits (73), Expect = 0.76
Identities = 62/230 (26%), Positives = 87/230 (37%), Gaps = 43/230 (18%)
Query: 224 LAQLLQTRREQAGLLSQDTGRPLGMPPPSNPHLSRLKVPVVYNACRDHSQVVPVAVAAVT 283
LA LL A L P PPP V A +S +V V A
Sbjct: 39 LAVLLAVAVTGAVLFLNHAHAPGTAPPPV----------VSTGAASANSALVTVERA--- 85
Query: 284 PSMRLSVLCDFSLVLIYEAFTRGGGGQVPALQVLLSDLGVPGLNEPPDDGVTLVTGLLDA 343
S LS+L D + ++F R Q LQ L P L D L+ L D
Sbjct: 86 DSSHLSILIDPRCPDLTDSFARLESAQASVLQALTEHQAQPRL--VGDQEQELLDTLADQ 143
Query: 344 LALLLVKAVLKEHSDVWLILIGVL-------QRLLELQPEVDESHHGILLLLRLLGQLQN 396
L LL +A S++ +G+ Q L LQ E L++LL + Q
Sbjct: 144 LPRLLARA-----SELQTECMGLRKGHGTLGQGLSALQSEQGR-------LIQLLSESQG 191
Query: 397 HLLALLDRLPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLR-PIRRDRPR 445
H+ L++ + +LD +++ L R P ++ L R P R RPR
Sbjct: 192 HMAHLVNSVSDILDALQRDRGLGR--------PRNKADLQRAPARGTRPR 233
>gi|85067503 arachidonate 15-lipoxygenase, second type isoform b
[Homo sapiens]
Length = 602
Score = 32.7 bits (73), Expect = 0.76
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
GE G G ++ + G R E+ + LD LG+E E Q + E + RV L
Sbjct: 11 GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66
Query: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
+ +HK P+L L P + DA R L PP G
Sbjct: 67 LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100
>gi|85067499 arachidonate 15-lipoxygenase, second type isoform a
[Homo sapiens]
Length = 647
Score = 32.7 bits (73), Expect = 0.76
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
GE G G ++ + G R E+ + LD LG+E E Q + E + RV L
Sbjct: 11 GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66
Query: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
+ +HK P+L L P + DA R L PP G
Sbjct: 67 LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100
>gi|85067501 arachidonate 15-lipoxygenase, second type isoform d
[Homo sapiens]
Length = 676
Score = 32.7 bits (73), Expect = 0.76
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 117 GEQCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHL 176
GE G G ++ + G R E+ + LD LG+E E Q + E + RV L
Sbjct: 11 GEAFGAGTWDKVSVSIVGTRGESP-PLPLDNLGKEFTAGAEEDFQVT---LPEDVGRVLL 66
Query: 177 VVLHKMLPILELPSPSSRDA-LHRGGPLPPPTHG 209
+ +HK P+L L P + DA R L PP G
Sbjct: 67 LRVHKAPPVLPLLGPLAPDAWFCRWFQLTPPRGG 100
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 32.3 bits (72), Expect = 0.99
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 19/106 (17%)
Query: 190 SPSSRDALHRGGPLPPP-----------THGRCSGDEVRLHEQDVLAQLLQTRREQAGLL 238
+P R H+ PLPPP T R G+E L +LL RR QA
Sbjct: 148 APRGRGRKHKTTPLPPPRLADVAPTPPKTPARKRGEEGTERMVQALTELL--RRAQAPQA 205
Query: 239 SQDTGRPLGMPPPSNPHLSRLKVP-VVYNACRDHSQVVPVAVAAVT 283
+ PS P SR + P CR Q V VA AAVT
Sbjct: 206 PRSRA-----CEPSTPRRSRGRPPGRPAGPCRRKQQAVVVAEAAVT 246
>gi|169164530 PREDICTED: similar to hCG1818432 [Homo sapiens]
Length = 541
Score = 32.0 bits (71), Expect = 1.3
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 391 LGQLQNHLLALLDRLPQLLDVR-GQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADP- 448
L L + LL LL +LL R G + P L A+ P+ R S L P R R +
Sbjct: 335 LRSLAHTLLGLLRNAQELLGPRPGLRRLAPAL---ALPAPALRESPLHPARELRLHSGSR 391
Query: 449 --DTPHPEKETQPRGHRGLAPGQE 470
T P++ +PRG PG E
Sbjct: 392 AAGTRFPKRRPEPRGEANGCPGLE 415
>gi|169164924 PREDICTED: similar to hCG1818432 [Homo sapiens]
Length = 541
Score = 32.0 bits (71), Expect = 1.3
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 391 LGQLQNHLLALLDRLPQLLDVR-GQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADP- 448
L L + LL LL +LL R G + P L A+ P+ R S L P R R +
Sbjct: 335 LRSLAHTLLGLLRNAQELLGPRPGLRRLAPAL---ALPAPALRESPLHPARELRLHSGSR 391
Query: 449 --DTPHPEKETQPRGHRGLAPGQE 470
T P++ +PRG PG E
Sbjct: 392 AAGTRFPKRRPEPRGEANGCPGLE 415
>gi|169163549 PREDICTED: hypothetical protein LOC646960 [Homo
sapiens]
Length = 541
Score = 32.0 bits (71), Expect = 1.3
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 391 LGQLQNHLLALLDRLPQLLDVR-GQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRADP- 448
L L + LL LL +LL R G + P L A+ P+ R S L P R R +
Sbjct: 335 LRSLAHTLLGLLRNAQELLGPRPGLRRLAPAL---ALPAPALRESPLHPARELRLHSGSR 391
Query: 449 --DTPHPEKETQPRGHRGLAPGQE 470
T P++ +PRG PG E
Sbjct: 392 AAGTRFPKRRPEPRGEANGCPGLE 415
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 31.6 bits (70), Expect = 1.7
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 417 TLPRLGAG--------AVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPR 460
TLPRLGAG A +GPS ++L RP P P P T PR
Sbjct: 55 TLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPR 106
>gi|24308115 interferon regulatory factor 2 binding protein 1 [Homo
sapiens]
Length = 584
Score = 31.6 bits (70), Expect = 1.7
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 403 DRLPQLLDVRGQEQTLPRLGAGAVKGPSCRSSLLRPIRRDRPRA---DPDTPHPEKETQP 459
DR+ L+D Q + L G GP +L P +D A P P P+ + QP
Sbjct: 43 DRIELLIDAARQLKRSHVLPEGRSPGPP---ALKHPATKDLAAAAAQGPQLPPPQAQPQP 99
Query: 460 RGHRGLAPGQERW 472
G G GQ+R+
Sbjct: 100 SGTGGGVSGQDRY 112
>gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo
sapiens]
Length = 669
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 30 PYVIPFTGCVTQKGQCQLPRHHPTGGQGAAPQRTAQSPSPRVRGPGHTHLWKTAEQSAHT 89
P +IP +G + + + L R PT + P+ P GP T L + Q + T
Sbjct: 125 PKLIPVSGKLEKNMEKILIR--PTAFKPVLPKPRGAPSLPSFMGPRATGL--SGSQGSLT 180
Query: 90 DVWLSNGNSTSPSLQSSHT-KPLAWHRWGEQCGVGARARLG 129
++ +S+S S SS KPLA+ W C G + G
Sbjct: 181 QLFGGPASSSSSSSSSSAADKPLAFSGWASGCPSGTLSDSG 221
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 31.6 bits (70), Expect = 1.7
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 188 LPSPSSRDALHRGGPLP----------PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGL 237
+P+PS+ +L G P P HG G+ LH D L QLL+ + +GL
Sbjct: 441 VPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA-LHHLDALDQLLEEAKVTSGL 499
Query: 238 LSQDTGRPLGMPPPSNPHL 256
+ T + P+ P L
Sbjct: 500 VKPTTSPLIPTTTPARPLL 518
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 31.6 bits (70), Expect = 1.7
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 188 LPSPSSRDALHRGGPLP----------PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGL 237
+P+PS+ +L G P P HG G+ LH D L QLL+ + +GL
Sbjct: 474 VPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA-LHHLDALDQLLEEAKVTSGL 532
Query: 238 LSQDTGRPLGMPPPSNPHL 256
+ T + P+ P L
Sbjct: 533 VKPTTSPLIPTTTPARPLL 551
>gi|4507447 transcription factor AP-4 (activating enhancer binding
protein 4) [Homo sapiens]
Length = 338
Score = 30.8 bits (68), Expect = 2.9
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 127 RLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVVLHKMLPIL 186
R+ LE+ EAH+ + + ++V L ++ Q +H QE L+R + ++LP
Sbjct: 169 RMMLEEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLH-QEKLEREQQQLRTQLLPP- 226
Query: 187 ELPSPSSRDALHRGGPLPPPTH 208
P+P+ + P PPP+H
Sbjct: 227 --PAPTHHPTVIVPAPPPPPSH 246
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 30.8 bits (68), Expect = 2.9
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 417 TLPRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQ 476
T PR + + P+ + RP R RP + P P P + + H G PG+ R +
Sbjct: 170 TGPRHASPGARRPAPGARRSRP-RLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQP 228
Query: 477 GPPGAACS 484
GA C+
Sbjct: 229 HLAGAGCA 236
>gi|93141049 collagen, type XII, alpha 1 short isoform precursor [Homo
sapiens]
Length = 1899
Score = 30.4 bits (67), Expect = 3.8
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 419 PRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLA-PGQERWQHGQG 477
P G GA KGP + I PR D P P+ P+G GL+ PG++ Q +G
Sbjct: 1590 PAGGPGA-KGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGMKG 1648
Query: 478 PPG 480
G
Sbjct: 1649 DAG 1651
>gi|93141047 collagen, type XII, alpha 1 long isoform precursor [Homo
sapiens]
Length = 3063
Score = 30.4 bits (67), Expect = 3.8
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 419 PRLGAGAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLA-PGQERWQHGQG 477
P G GA KGP + I PR D P P+ P+G GL+ PG++ Q +G
Sbjct: 2754 PAGGPGA-KGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGMKG 2812
Query: 478 PPG 480
G
Sbjct: 2813 DAG 2815
>gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]
Length = 765
Score = 30.4 bits (67), Expect = 3.8
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 428 GPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPGAACS 484
GP + + + P HP+ +T P G +PG R GPPG + S
Sbjct: 687 GPKAVAFIHTDLPEPPPSLTVQRDHPQLKTPPSKLNGQSPGLARLGPATGPPGPSAS 743
>gi|8923380 O-sialoglycoprotein endopeptidase [Homo sapiens]
Length = 335
Score = 30.4 bits (67), Expect = 3.8
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 205 PPTHGRCSGDEVRLHEQDVLAQLLQTRREQAGLLSQD-------TGRPLGMPPPSNPHLS 257
PP G GD R H + V+ LLQ ++GL SQD G +G P S ++
Sbjct: 35 PPGTGFLPGDTAR-HHRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVA 93
Query: 258 RL------KVPVVYNACRDHSQVVPVAVAAVTPSM 286
R K V N C H ++ + A +P++
Sbjct: 94 RTVAQLWNKPLVGVNHCIGHIEMGRLITGATSPTV 128
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 30.0 bits (66), Expect = 4.9
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 17/76 (22%)
Query: 4 DHPCVVFHKVLAAPGSSCCATDPQKEPYVIPFTGCVTQKGQCQLPRHHPTGGQGA----- 58
D PCV + PGS C +D V T C +K +C+ R QGA
Sbjct: 700 DGPCVCDFSCQSVPGSPVCGSDG-----VTYSTECELKKARCESQRGLYVAAQGACRGPT 754
Query: 59 -------APQRTAQSP 67
AP AQ+P
Sbjct: 755 FAPLPPVAPLHCAQTP 770
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 30.0 bits (66), Expect = 4.9
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 424 GAVKGPSCRSSLLRPIRRDRPRADPDTPHPEKETQPRGHRGLAPGQERWQHGQGPPG 480
GA+ P + L +P P AD HP KE P G +G GQGPPG
Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPP-GEKG----------GQGPPG 781
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,001,353
Number of Sequences: 37866
Number of extensions: 1307854
Number of successful extensions: 4561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 4520
Number of HSP's gapped (non-prelim): 85
length of query: 484
length of database: 18,247,518
effective HSP length: 106
effective length of query: 378
effective length of database: 14,233,722
effective search space: 5380346916
effective search space used: 5380346916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.