Search of human proteins with 239745297

Search of human proteins with 239745297

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]          270   2e-73
gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM13...   269   5e-73
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa...   263   3e-71
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor...   263   3e-71
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa...   150   4e-37
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor...   150   4e-37
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi...   112   8e-26
gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]            106   5e-24
gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]            106   5e-24
gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]             99   7e-22
gi|239750924 PREDICTED: similar to Putative golgin subfamily A m...    99   9e-22
gi|239745322 PREDICTED: similar to Putative golgin subfamily A m...    99   9e-22
gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Hom...    70   6e-13
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap...    69   1e-12
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi...    69   1e-12
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom...    67   5e-12
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap...    64   3e-11
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi...    63   6e-11
gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo sapi...    55   2e-08
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l...    54   5e-08
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s...    52   1e-07
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l...    52   2e-07
gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo s...    51   2e-07
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l...    50   7e-07
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l...    50   7e-07
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein...    50   7e-07
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein...    50   7e-07
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l...    49   1e-06
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l...    49   1e-06
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l...    47   4e-06

>gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
          Length = 131

 Score =  270 bits (690), Expect = 2e-73
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES
Sbjct: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
           VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120

Query: 121 VGDHKEGHGKF 131
           VGDHKEGHGKF
Sbjct: 121 VGDHKEGHGKF 131


>gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM130
           [Homo sapiens]
          Length = 131

 Score =  269 bits (687), Expect = 5e-73
 Identities = 130/131 (99%), Positives = 131/131 (100%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES
Sbjct: 1   MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
           VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120

Query: 121 VGDHKEGHGKF 131
           VGDHKEGHGKF
Sbjct: 121 VGDHKEGHGKF 131


>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
           sapiens]
          Length = 230

 Score =  263 bits (672), Expect = 3e-71
 Identities = 127/131 (96%), Positives = 130/131 (99%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
           V GETH+ALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 160 VCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 219

Query: 121 VGDHKEGHGKF 131
           VGDHKEGHGKF
Sbjct: 220 VGDHKEGHGKF 230


>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
           [Homo sapiens]
          Length = 230

 Score =  263 bits (672), Expect = 3e-71
 Identities = 127/131 (96%), Positives = 130/131 (99%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
           V GETH+ALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL
Sbjct: 160 VCGETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 219

Query: 121 VGDHKEGHGKF 131
           VGDHKEGHGKF
Sbjct: 220 VGDHKEGHGKF 230


>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
           sapiens]
          Length = 185

 Score =  150 bits (378), Expect = 4e-37
 Identities = 73/77 (94%), Positives = 76/77 (98%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159

Query: 61  VFGETHRALQGAMEKLQ 77
           V GETH+ALQGAMEKLQ
Sbjct: 160 VCGETHQALQGAMEKLQ 176


>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
           [Homo sapiens]
          Length = 185

 Score =  150 bits (378), Expect = 4e-37
 Identities = 73/77 (94%), Positives = 76/77 (98%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MPNIPGDLESREAMVAFFNSAGA+AQEEQRVCCQPLAHPVASSQKKPEVAAPAPE+GGES
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASSQKKPEVAAPAPETGGES 159

Query: 61  VFGETHRALQGAMEKLQ 77
           V GETH+ALQGAMEKLQ
Sbjct: 160 VCGETHQALQGAMEKLQ 176


>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
           sapiens]
          Length = 1002

 Score =  112 bits (280), Expect = 8e-26
 Identities = 61/87 (70%), Positives = 69/87 (79%), Gaps = 10/87 (11%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQ----------RVCCQPLAHPVASSQKKPEVA 50
           MP+IP DLESREAMVAFFNSA ASA+EEQ          RV C+ LAH +AS+QK+PE A
Sbjct: 723 MPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAA 782

Query: 51  APAPESGGESVFGETHRALQGAMEKLQ 77
           APAP +GG+SV GETHRALQGAMEKLQ
Sbjct: 783 APAPGTGGDSVCGETHRALQGAMEKLQ 809


>gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 421

 Score =  106 bits (265), Expect = 5e-24
 Identities = 79/186 (42%), Positives = 91/186 (48%), Gaps = 55/186 (29%)

Query: 1   MPNIPGDLESREAM---------------------------------VAFFNSAGASAQE 27
           MPNIPGDLESRE +                                 VAFFNSAG SAQE
Sbjct: 144 MPNIPGDLESRETVTPLCSWFPRLLISVDFHSFREPVIRHHFTCDQQVAFFNSAGTSAQE 203

Query: 28  EQRVCCQPLAHPVASSQKKPEVAAPAPESGGESV-FGETHRA---LQGAMEKLQES---T 80
           EQR+CCQPLAHPVASSQKKPE AAPAP +GGESV F +  +    L+  +EKL+      
Sbjct: 204 EQRMCCQPLAHPVASSQKKPEAAAPAPGTGGESVDFMDLLKEKVDLREWVEKLKLQFIHL 263

Query: 81  SARGQCQRRSTGRGGHRQAGPGPGGDEGEP---------------AGAAGQVLQLVGDHK 125
           S +    R+     G +   P     E E                    GQVL+LV DH 
Sbjct: 264 SGKTDTMRKYITPYGSQGTVPKMRHREEEEIVRLAQDREEMKVNLLEMQGQVLRLVRDHN 323

Query: 126 EGHGKF 131
           EGHGKF
Sbjct: 324 EGHGKF 329


>gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 421

 Score =  106 bits (265), Expect = 5e-24
 Identities = 79/186 (42%), Positives = 91/186 (48%), Gaps = 55/186 (29%)

Query: 1   MPNIPGDLESREAM---------------------------------VAFFNSAGASAQE 27
           MPNIPGDLESRE +                                 VAFFNSAG SAQE
Sbjct: 144 MPNIPGDLESRETVTPLCSWFPRFLISVDFHSFREPVIRHHFTCDQQVAFFNSAGTSAQE 203

Query: 28  EQRVCCQPLAHPVASSQKKPEVAAPAPESGGESV-FGETHRA---LQGAMEKLQES---T 80
           EQR+CCQPLAHPVASSQKKPE AAPAP +GGESV F +  +    L+  +EKL+      
Sbjct: 204 EQRMCCQPLAHPVASSQKKPEAAAPAPGTGGESVDFMDLLKEKVDLREWVEKLKLQFIHL 263

Query: 81  SARGQCQRRSTGRGGHRQAGPGPGGDEGEP---------------AGAAGQVLQLVGDHK 125
           S +    R+     G +   P     E E                    GQVL+LV DH 
Sbjct: 264 SGKTDTMRKYITPYGSQGTVPKMRHREEEEIVRLAQDREEMKVNLLEMQGQVLRLVRDHN 323

Query: 126 EGHGKF 131
           EGHGKF
Sbjct: 324 EGHGKF 329


>gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 212

 Score = 99.4 bits (246), Expect = 7e-22
 Identities = 60/119 (50%), Positives = 70/119 (58%), Gaps = 19/119 (15%)

Query: 15  VAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGESVFGETHRALQGAME 74
           VAFFNSAG SAQEEQR+CCQPLAHPVASSQKKPE AAPAP +GG+ +   T    QG + 
Sbjct: 18  VAFFNSAGTSAQEEQRMCCQPLAHPVASSQKKPEAAAPAPGTGGKYI---TPYGSQGTVS 74

Query: 75  KL--QESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
           K+  +E        Q R   +    +                GQVL+LV DH EGHGKF
Sbjct: 75  KMRHREEEEIVRLAQDREEMKVNLLE--------------MQGQVLRLVRDHNEGHGKF 119


>gi|239750924 PREDICTED: similar to Putative golgin subfamily A
          member 2-like protein 5 [Homo sapiens]
          Length = 110

 Score = 99.0 bits (245), Expect = 9e-22
 Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 11/98 (11%)

Query: 1  MPNIPGDLESREAMVAFFNSAGASAQEEQ-----------RVCCQPLAHPVASSQKKPEV 49
          MP+I  DL+SREAMVAF NSA  SA+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 1  MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60

Query: 50 AAPAPESGGESVFGETHRALQGAMEKLQESTSARGQCQ 87
          AAP P +GG+S  GETHRA++    KL    S+   CQ
Sbjct: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98


>gi|239745322 PREDICTED: similar to Putative golgin subfamily A
          member 2-like protein 5 [Homo sapiens]
          Length = 110

 Score = 99.0 bits (245), Expect = 9e-22
 Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 11/98 (11%)

Query: 1  MPNIPGDLESREAMVAFFNSAGASAQEEQ-----------RVCCQPLAHPVASSQKKPEV 49
          MP+I  DL+SREAMVAF NSA  SA+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 1  MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60

Query: 50 AAPAPESGGESVFGETHRALQGAMEKLQESTSARGQCQ 87
          AAP P +GG+S  GETHRA++    KL    S+   CQ
Sbjct: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98


>gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Homo
           sapiens]
          Length = 144

 Score = 69.7 bits (169), Expect = 6e-13
 Identities = 49/121 (40%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASS-------QKKPEVAAPA 53
           MP+IP DLES++AMVAFFNSA ASA+EEQ   C  L    AS+        ++     P 
Sbjct: 13  MPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPRRNLRQQPQ 72

Query: 54  P-ESGGESVFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAG 112
           P E G     G   R  +G             + +  + G G H+QAGPG G  EGE AG
Sbjct: 73  PQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQGRGEGEAAG 132

Query: 113 A 113
           A
Sbjct: 133 A 133


>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
           sapiens]
          Length = 603

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 20/112 (17%)

Query: 40  VASSQKKPEVAAPAPESGGESV--------------------FGETHRALQGAMEKLQES 79
           + S++K+PE A PA  +GGES                      G      +   +K+   
Sbjct: 397 LTSAEKEPEAAVPASGTGGESSGLMDLLEEKADLREHVEKLELGFIQYRRERCHQKVHRL 456

Query: 80  TSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
            +  G   + ++  GGH QAGPG GG+EGE AGAAG  +   G + EGHGKF
Sbjct: 457 LTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKF 508


>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
           sapiens]
          Length = 603

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 20/112 (17%)

Query: 40  VASSQKKPEVAAPAPESGGESV--------------------FGETHRALQGAMEKLQES 79
           + S++K+PE A PA  +GGES                      G      +   +K+   
Sbjct: 397 LTSAEKEPEAAVPASGTGGESSGLMDLLEEKADLREHVEKLELGFIQYRRERCHQKVHRL 456

Query: 80  TSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
            +  G   + ++  GGH QAGPG GG+EGE AGAAG  +   G + EGHGKF
Sbjct: 457 LTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKF 508


>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
           sapiens]
          Length = 314

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 20/112 (17%)

Query: 40  VASSQKKPEVAAPAPESGGESV--------------------FGETHRALQGAMEKLQES 79
           + S++K+PE A PA  +GGES                      G      +   +K+   
Sbjct: 109 LTSAEKEPEAAVPASGTGGESSGLMDLLEEKVDLREHVEKLELGFIQYRRERCHQKVHRL 168

Query: 80  TSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
            +  G   + ++  GGH QAGPG GG+EGE  GAAG  +   G + EGHGKF
Sbjct: 169 LTEPGDSAKDASPGGGHHQAGPGRGGEEGEAVGAAGDGVAACGSYSEGHGKF 220


>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
           sapiens]
          Length = 430

 Score = 64.3 bits (155), Expect = 3e-11
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P DLESREAM  F +     A   + V             +K E+           
Sbjct: 238 MPSVPEDLESREAMSGFMDHLEEKADLSELV-------------EKEELG---------- 274

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
            F + +R  +   +K+    +  G   + +   GGH QAGPG GGDEGE AGAAG  +  
Sbjct: 275 -FFQYYR--ERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAA 331

Query: 121 VGDHKEGHGKF 131
            GD+K GH KF
Sbjct: 332 GGDYK-GHSKF 341


>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
           sapiens]
          Length = 434

 Score = 63.2 bits (152), Expect = 6e-11
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           +P+IP DLESREAM  F +     A   + V             +K E+           
Sbjct: 242 IPSIPQDLESREAMSGFMDHLEEKADLSELV-------------EKEELG---------- 278

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
            F + +R  +   +K+    +  G   + +   GGH QAGPG GGDEGE AGAAG  +  
Sbjct: 279 -FFQYYR--ERCHQKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAA 335

Query: 121 VGDHKEGHGKF 131
            GD+K GH KF
Sbjct: 336 GGDYK-GHSKF 345


>gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo
           sapiens]
          Length = 283

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 74  EKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
           +K+    +  G   + +   GGH QAGPG GGDEGE AGAAG  +   GD+K GH KF
Sbjct: 138 QKVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAAGGDYK-GHSKF 194


>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 630

 Score = 53.5 bits (127), Expect = 5e-08
 Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 28/131 (21%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P DLESREAM +F +     A   + V              K E+           
Sbjct: 442 MPSVPEDLESREAMSSFMDHLKEKADLSELV--------------KKELCF--------- 478

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                H       +K     S  G C + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 479 ----IHHWRDRRHQKTHHLLSEPGGCAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 533

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 534 YSNYNNGHRKF 544


>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 1052

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 41/131 (31%), Positives = 54/131 (41%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P DLESREAM +F +     A   + V             KK E+           
Sbjct: 485 MPSVPEDLESREAMSSFMDQLEEKADLSELV-------------KKKELCF--------- 522

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                H       +K+    S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 523 ----IHHWRDRCHQKIHHLLSEPGGRAKDAALVGGHHQAG-AQGGDEGEAAGAAADGVAA 577

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 578 YSNYNNGHRKF 588


>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 3 [Homo sapiens]
          Length = 601

 Score = 51.6 bits (122), Expect = 2e-07
 Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 25/129 (19%)

Query: 26  QEEQRVCCQPLAHPVASSQKKPEVAAP--APESGGESVFGETHRALQGAMEKLQESTSAR 83
           +E Q    + LAH VAS+QK+PE A    AP  GGES     H   +  + +L +    R
Sbjct: 389 KELQEKLGKRLAHLVASAQKEPEAARGPGAPGPGGESSSFMDHLEEKADLSELVKKQELR 448

Query: 84  ---------------------GQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVG 122
                                G+ +  + G GGH QAG   GGDE E AGAA   +    
Sbjct: 449 FIQYWQERCHQKIHHLLSEPGGRAKDAALG-GGHHQAG-AQGGDEDEAAGAAADGIAAYS 506

Query: 123 DHKEGHGKF 131
           ++  GH KF
Sbjct: 507 NYNNGHRKF 515


>gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 1102

 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 23/115 (20%)

Query: 39  PVASSQKKPEVAAP--APESGGESVFGETHRALQGAMEKLQESTSA------RGQCQRR- 89
           PVAS+QK+PE A    AP  GGES     H   +  + +L +          R +C ++ 
Sbjct: 525 PVASAQKEPEAARGPGAPGPGGESSSFMDHLEEKADLSELVKKKELCFIHHWRDRCHQKI 584

Query: 90  ------STGR-------GGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
                   GR       GGH QAG   GGDEGE AGAA   +    ++  GH KF
Sbjct: 585 HHLLSEPGGRAKDAALVGGHHQAG-AQGGDEGEAAGAAADGVAAYSNYNNGHRKF 638


>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P DLESREAM +F +     A   + V  Q L       ++               
Sbjct: 443 MPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER--------------- 487

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                        +K+    S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 488 -----------CHQKIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 536 YSNYNNGHRKF 546


>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 4 [Homo sapiens]
          Length = 632

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P DLESREAM +F +     A   + V  Q L       ++               
Sbjct: 443 MPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER--------------- 487

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                        +K+    S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 488 -----------CHQKIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 536 YSNYNNGHRKF 546


>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
           [Homo sapiens]
          Length = 580

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P D ESREAM +F +     A   + V             KK E+           
Sbjct: 391 MPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF--------- 428

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                H   +   +K     S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 429 ----IHHWRERCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 483

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 484 YSNYNNGHRKF 494


>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 1 [Homo sapiens]
          Length = 632

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P D ESREAM +F +     A   + V             KK E+           
Sbjct: 443 MPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF--------- 480

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                H   +   +K     S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 481 ----IHHWRERCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 536 YSNYNNGHRKF 546


>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P D ESREAM +F +     A   + V             KK E+           
Sbjct: 443 MPSVPEDPESREAMSSFMDHLEEKADLSELV-------------KKKELCF--------- 480

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                H       +K     S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 481 ----IHHWRDRCHQKTHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 536 YSNYNNGHRKF 546


>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 601

 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 22/111 (19%)

Query: 42  SSQKKPEVAAP--APESGGESVFGETHRALQGAMEKLQEST------------------- 80
           S+QK+PE A    AP  GGES     H   +  + +L +                     
Sbjct: 406 SAQKEPEAARGPGAPGPGGESSSFMDHLKEKADLSELVKKELCFIHHWRDRRHQKTHHLL 465

Query: 81  SARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQLVGDHKEGHGKF 131
           S  G C + +   GGH QAG   GGDEGE AGAA   +    ++  GH KF
Sbjct: 466 SEPGGCAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAAYSNYNNGHRKF 515


>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score = 47.0 bits (110), Expect = 4e-06
 Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 27/131 (20%)

Query: 1   MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASSQKKPEVAAPAPESGGES 60
           MP++P D ESREAM +F +     A   + V  Q L       ++               
Sbjct: 443 MPSVPEDPESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQER--------------- 487

Query: 61  VFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAGAAGQVLQL 120
                        +K+    S  G   + +   GGH QAG   GGDEGE AGAA   +  
Sbjct: 488 -----------CHQKIHHLLSEPGGRAKDAALGGGHHQAG-AQGGDEGEAAGAAADGIAA 535

Query: 121 VGDHKEGHGKF 131
             ++  GH KF
Sbjct: 536 YSNYNNGHRKF 546


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.129    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,392,662
Number of Sequences: 37866
Number of extensions: 330158
Number of successful extensions: 2268
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 2028
Number of HSP's gapped (non-prelim): 380
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.