Guide to the Human Genome
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Name: GOLGA2L1 Sequence: fasta or formatted (144aa) NCBI GI: 13487904
Description:

golgi autoantigen, golgin subfamily a, 2-like 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         15           2
 C cysteine            4.9          7           1
 D aspartate           1.4          2           1
 E glutamate          11.8         17           5
 F phenylalanine       1.4          2           2
 G glycine            11.8         17           3
 H histidine           1.4          2           1
 I isoleucine          2.1          3           1
 K lysine              1.4          2           1
 L leucine             4.9          7           1
 M methionine          2.1          3           1
 N asparagine          1.4          2           1
 P proline            10.4         15           1
 Q glutamine           9.0         13           2
 R arginine            9.0         13           2
 S serine              5.6          8           1
 T threonine           2.1          3           1
 V valine              6.9         10           1
 W tryptophan          2.1          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi autoantigen, golgin subfamily a, 2-like 1 [Hom... 
GOLGA2                0.214   Golgi autoantigen, golgin subfamily a, 2 
LOC100131930          0.196   PREDICTED: similar to hCG2004312 isoform 1 
LOC100288367          0.196   PREDICTED: hypothetical protein XP_002343419 isofor...
LOC642423             0.161   PREDICTED: similar to hCG2004312 
LOC727751             0.157   PREDICTED: similar to cis-Golgi matrix protein GM13...
GOLGA8E               0.143   golgi autoantigen, golgin subfamily a, 8E 
LOC100131930          0.132   PREDICTED: similar to hCG2004312 isoform 2 
LOC100288367          0.132   PREDICTED: hypothetical protein XP_002343418 isofor...
GOLGA8G               0.129   golgi autoantigen, golgin subfamily a, 8G 
LOC728080             0.107   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.107   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.107   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC100131297          0.107   PREDICTED: similar to Putative golgin subfamily A m...
LOC100131297          0.107   PREDICTED: similar to Putative golgin subfamily A m...
LOC653720             0.100   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.100   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC728047             0.093   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.089   PREDICTED: similar to hect domain and RLD 2 
LOC728498             0.089   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.089   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653073             0.089   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653061             0.086   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8B               0.079   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.079   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8F               0.075   golgi autoantigen, golgin subfamily a, 8F 
LOC728477             0.071   PREDICTED: similar to hCG27445 
LOC728477             0.071   PREDICTED: similar to hCG27445 
LOC100292334          0.068   PREDICTED: similar to GOLGA8B protein, partial [Hom...
GOLGA6D               0.050   golgi autoantigen, golgin subfamily a, 6D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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