LOC647020 18335

Name: LOC647020	Sequence: fasta or formatted (450aa)		NCBI GI: 239745256
Description: PREDICTED: similar to hCG1791241		Not currently referenced in the text
Other entries for this name: alt prot {272aa} PREDICTED: similar to acidic (leucine-rich) nuclear phosphoprotei... alt prot {272aa} PREDICTED: similar to acidic (leucine-rich) nuclear phosphoprotei...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 28 2 C cysteine 2.2 10 1 D aspartate 4.4 20 1 E glutamate 7.6 34 2 F phenylalanine 2.4 11 1 G glycine 6.2 28 2 H histidine 2.2 10 1 I isoleucine 5.1 23 1 K lysine 6.4 29 2 L leucine 12.0 54 3 M methionine 1.1 5 1 N asparagine 4.9 22 2 P proline 11.3 51 2 Q glutamine 4.4 20 2 R arginine 3.8 17 2 S serine 8.0 36 1 T threonine 4.7 21 2 V valine 3.8 17 2 W tryptophan 1.3 6 1 Y tyrosine 1.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1791241 LOC647020 0.381 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.381 PREDICTED: similar to acidic (leucine-rich) nuclear... ANP32B 0.249 acidic (leucine-rich) nuclear phosphoprotein 32 famil... ANP32A 0.201 acidic (leucine-rich) nuclear phosphoprotein 32 famil... ANP32E 0.153 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ANP32C 0.152 acidic nuclear phosphoprotein 32C ANP32D 0.131 acidic nuclear phosphoprotein 32D ANP32E 0.126 acidic (leucine-rich) nuclear phosphoprotein 32 fam... ANP32E 0.064 acidic (leucine-rich) nuclear phosphoprotein 32 fam... SNRPA1 0.022 small nuclear ribonucleoprotein polypeptide A' [Homo... LRRC46 0.018 leucine rich repeat containing 46 NXF1 0.017 nuclear RNA export factor 1 isoform 1 NACA 0.017 nascent polypeptide-associated complex alpha subuni... CD180 0.017 CD180 molecule LRRIQ1 0.017 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.017 leucine-rich repeats and IQ motif containing 1 isof... LRRC32 0.016 leucine rich repeat containing 32 precursor LRRC32 0.016 leucine rich repeat containing 32 precursor LRRC6 0.016 leucine rich repeat containing 6 LRRC48 0.014 leucine rich repeat containing 48 isoform b LRRC48 0.014 leucine rich repeat containing 48 isoform b LRRC48 0.014 leucine rich repeat containing 48 isoform a LRRC48 0.014 leucine rich repeat containing 48 isoform a CEP110 0.014 centrosomal protein 110kDa LRRC56 0.013 leucine rich repeat containing 56 NXF1 0.013 nuclear RNA export factor 1 isoform 2 SLITRK5 0.013 SLIT and NTRK-like family, member 5 NISCH 0.013 nischarin MAP1B 0.012 microtubule-associated protein 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.