Guide to the Human Genome
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Name: ANP32D Sequence: fasta or formatted (131aa) NCBI GI: 21071028
Description:

acidic nuclear phosphoprotein 32D

Referenced in:

HLA and Related Proteins
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.3          3           1
 C cysteine            1.5          2           1
 D aspartate           3.8          5           1
 E glutamate          12.2         16           2
 F phenylalanine       2.3          3           1
 G glycine             4.6          6           1
 H histidine           1.5          2           1
 I isoleucine          5.3          7           1
 K lysine              9.2         12           2
 L leucine            20.6         27           2
 M methionine          1.5          2           1
 N asparagine         11.5         15           2
 P proline             3.1          4           1
 Q glutamine           0.8          1           1
 R arginine            2.3          3           1
 S serine              7.6         10           2
 T threonine           5.3          7           1
 V valine              3.1          4           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acidic nuclear phosphoprotein 32D 
ANP32A                0.885   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32C                0.726   acidic nuclear phosphoprotein 32C 
ANP32B                0.692   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32E                0.620   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
LOC647020             0.504   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.504   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.504   PREDICTED: similar to hCG1791241 
ANP32E                0.402   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.274   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
CEP110                0.098   centrosomal protein 110kDa 
NISCH                 0.094   nischarin 
LRRC40                0.085   leucine rich repeat containing 40 
CD180                 0.081   CD180 molecule 
SNRPA1                0.077   small nuclear ribonucleoprotein polypeptide A' [Homo...
PPP1R7                0.073   protein phosphatase 1, regulatory subunit 7 
GPR125                0.060   G protein-coupled receptor 125 
LRRC49                0.060   leucine rich repeat containing 49 
LRRC48                0.060   leucine rich repeat containing 48 isoform b 
LRRC48                0.060   leucine rich repeat containing 48 isoform b 
LRRC48                0.060   leucine rich repeat containing 48 isoform a 
LRRC48                0.060   leucine rich repeat containing 48 isoform a 
LRRC1                 0.060   leucine rich repeat containing 1 
LRRC61                0.056   leucine rich repeat containing 61 
LRRC61                0.056   leucine rich repeat containing 61 
LRRCC1                0.056   sodium channel associated protein 2 isoform a [Homo...
CEP97                 0.056   centrosomal protein 97kDa 
LOC401387             0.051   leucine-rich repeat and death domain-containing pro...
FBXL13                0.051   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL13                0.051   F-box and leucine-rich repeat protein 13 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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