NXF1 5707

Name: NXF1	Sequence: fasta or formatted (619aa)		NCBI GI: 15487670
Description: nuclear RNA export factor 1 isoform 1		Referenced in: Nucleus and Nucleolus RNases and RNA Stability
Other entries for this name: alt prot [356aa] nuclear RNA export factor 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 39 2 C cysteine 1.5 9 2 D aspartate 6.8 42 2 E glutamate 6.0 37 2 F phenylalanine 4.2 26 2 G glycine 5.3 33 2 H histidine 1.8 11 1 I isoleucine 5.0 31 3 K lysine 6.0 37 3 L leucine 9.9 61 2 M methionine 1.6 10 1 N asparagine 5.3 33 2 P proline 5.8 36 3 Q glutamine 4.2 26 2 R arginine 7.9 49 2 S serine 9.0 56 3 T threonine 4.7 29 2 V valine 4.7 29 2 W tryptophan 1.1 7 1 Y tyrosine 2.9 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear RNA export factor 1 isoform 1 NXF2B 0.568 nuclear RNA export factor 2B NXF2 0.568 nuclear RNA export factor 2 NXF2 0.568 nuclear RNA export factor 2 NXF1 0.540 nuclear RNA export factor 1 isoform 2 NXF3 0.391 nuclear RNA export factor 3 NXF5 0.310 nuclear RNA export factor 5 ANP32B 0.020 acidic (leucine-rich) nuclear phosphoprotein 32 famil... ANP32A 0.015 acidic (leucine-rich) nuclear phosphoprotein 32 famil... LOC647020 0.012 PREDICTED: similar to hCG1791241 SLIT3 0.012 slit homolog 3 LRRC61 0.012 leucine rich repeat containing 61 LRRC61 0.012 leucine rich repeat containing 61 LRRC46 0.011 leucine rich repeat containing 46 LRRN1 0.011 leucine rich repeat neuronal 1 TLR8 0.011 toll-like receptor 8 LOC647020 0.011 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.011 PREDICTED: similar to acidic (leucine-rich) nuclear... ANP32E 0.011 acidic (leucine-rich) nuclear phosphoprotein 32 fami... TBCEL 0.010 tubulin folding cofactor E-like TBCEL 0.010 tubulin folding cofactor E-like LRRC47 0.010 leucine rich repeat containing 47 DNAL1 0.010 axonemal dynein light chain 1 ANP32E 0.009 acidic (leucine-rich) nuclear phosphoprotein 32 fam... LRRC23 0.009 leucine rich repeat containing 23 isoform a LRRC23 0.009 leucine rich repeat containing 23 isoform a GIGYF1 0.008 PERQ amino acid rich, with GYF domain 1 CEP110 0.008 centrosomal protein 110kDa DVL3 0.007 dishevelled 3 LRRC7 0.007 leucine rich repeat containing 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.