Guide to the Human Genome
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Name: ANP32C Sequence: fasta or formatted (234aa) NCBI GI: 6912604
Description:

acidic nuclear phosphoprotein 32C

Referenced in:

HLA and Related Proteins
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          6           1
 C cysteine            1.3          3           1
 D aspartate           9.4         22           2
 E glutamate          22.2         52           6
 F phenylalanine       1.7          4           1
 G glycine             8.1         19           2
 H histidine           2.1          5           1
 I isoleucine          2.6          6           1
 K lysine              6.4         15           1
 L leucine            13.7         32           3
 M methionine          0.9          2           1
 N asparagine          5.1         12           1
 P proline             2.1          5           1
 Q glutamine           1.7          4           1
 R arginine            3.8          9           2
 S serine              6.0         14           1
 T threonine           2.6          6           1
 V valine              4.3         10           2
 W tryptophan          0.4          1           1
 Y tyrosine            3.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acidic nuclear phosphoprotein 32C 
ANP32A                0.810   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32B                0.527   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32E                0.469   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
LOC647020             0.415   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.415   PREDICTED: similar to acidic (leucine-rich) nuclear...
ANP32D                0.379   acidic nuclear phosphoprotein 32D 
ANP32E                0.355   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
LOC647020             0.306   PREDICTED: similar to hCG1791241 
ANP32E                0.301   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
RPGR                  0.098   retinitis pigmentosa GTPase regulator isoform C [Hom...
CENPB                 0.080   centromere protein B 
MYT1L                 0.076   myelin transcription factor 1-like 
YTHDC1                0.076   splicing factor YT521-B isoform 2 
YTHDC1                0.076   splicing factor YT521-B isoform 1 
PELP1                 0.074   proline, glutamic acid and leucine rich protein 1 [...
EIF5B                 0.071   eukaryotic translation initiation factor 5B 
MYT1                  0.067   myelin transcription factor 1 
NEFL                  0.065   neurofilament, light polypeptide 68kDa 
FAM9A                 0.065   family with sequence similarity 9, member A 
NSBP1                 0.060   nucleosomal binding protein 1 
HUWE1                 0.060   HECT, UBA and WWE domain containing 1 
WDR87                 0.060   NYD-SP11 protein 
KIAA1429              0.060   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.060   hypothetical protein LOC25962 isoform 2 
RANGAP1               0.060   Ran GTPase activating protein 1 
NISCH                 0.060   nischarin 
NCL                   0.058   nucleolin 
CDC2L2                0.058   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.058   cell division cycle 2-like 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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