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Search of human proteins with 239744457
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755684 PREDICTED: hypothetical protein [Homo sapiens] 711 0.0
gi|239750147 PREDICTED: hypothetical protein [Homo sapiens] 711 0.0
gi|239744457 PREDICTED: hypothetical protein [Homo sapiens] 711 0.0
gi|4758392 forkhead box D1 [Homo sapiens] 47 3e-05
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.007
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.007
gi|169162343 PREDICTED: hypothetical protein [Homo sapiens] 38 0.012
gi|113411617 PREDICTED: hypothetical protein [Homo sapiens] 38 0.012
gi|23111007 hypothetical protein LOC79018 [Homo sapiens] 37 0.020
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 37 0.035
gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo ... 37 0.035
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 37 0.035
gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo ... 37 0.035
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 37 0.035
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.035
gi|239757099 PREDICTED: hypothetical protein [Homo sapiens] 36 0.045
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.077
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 35 0.077
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 35 0.077
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.077
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 35 0.077
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 35 0.077
gi|46391104 hypothetical protein LOC83541 [Homo sapiens] 35 0.077
gi|108389127 hypothetical protein LOC83541 [Homo sapiens] 35 0.077
gi|13937401 hypothetical protein LOC83541 [Homo sapiens] 35 0.077
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 35 0.10
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 35 0.10
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 35 0.13
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
>gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]
Length = 415
Score = 711 bits (1834), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG 60
MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG
Sbjct: 65 MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG 124
Query: 61 HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 120
HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ
Sbjct: 125 HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 184
Query: 121 GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS 180
GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS
Sbjct: 185 GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS 244
Query: 181 RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA 240
RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA
Sbjct: 245 RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA 304
Query: 241 GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA 300
GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA
Sbjct: 305 GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA 364
Query: 301 AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL 351
AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL
Sbjct: 365 AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL 415
>gi|239750147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 415
Score = 711 bits (1834), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG 60
MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG
Sbjct: 65 MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG 124
Query: 61 HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 120
HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ
Sbjct: 125 HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 184
Query: 121 GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS 180
GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS
Sbjct: 185 GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS 244
Query: 181 RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA 240
RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA
Sbjct: 245 RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA 304
Query: 241 GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA 300
GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA
Sbjct: 305 GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA 364
Query: 301 AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL 351
AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL
Sbjct: 365 AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL 415
>gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]
Length = 351
Score = 711 bits (1834), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG 60
MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG
Sbjct: 1 MQNIKSGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLEDAHGNEFALKLIG 60
Query: 61 HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 120
HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ
Sbjct: 61 HATVGGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 120
Query: 121 GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS 180
GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS
Sbjct: 121 GQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYS 180
Query: 181 RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA 240
RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA
Sbjct: 181 RRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGA 240
Query: 241 GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA 300
GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA
Sbjct: 241 GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAA 300
Query: 301 AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL 351
AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL
Sbjct: 301 AGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRAPRATL 351
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 47.0 bits (110), Expect = 3e-05
Identities = 58/194 (29%), Positives = 71/194 (36%), Gaps = 14/194 (7%)
Query: 167 GCGAPGSTRRSGYSRRRESCAAPSPSHRPG-----ARLSLSLCLLPHPACLCVSVPQAPS 221
G GA G + A P P H G L L P+ L + A +
Sbjct: 241 GAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAA 300
Query: 222 DSAGLSRSLPPPPAGRGGAG--TRELRFLRFHP---ARPCKSPGRARHSD----SRLSRA 272
+A S PPPP G A R R HP A P P A + S L+R+
Sbjct: 301 AAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARS 360
Query: 273 PPGAGTTRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPED 332
P + G P A AA AA AA S AAP + G+ G + P
Sbjct: 361 PFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAA 420
Query: 333 AVTRGGVGAAAFRA 346
A+TR V AAA A
Sbjct: 421 ALTRSLVAAAAAAA 434
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.9 bits (89), Expect = 0.007
Identities = 70/260 (26%), Positives = 97/260 (37%), Gaps = 53/260 (20%)
Query: 65 GGFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ---- 120
GG + +AV++S+ ++ P +N + L NRD EG R
Sbjct: 963 GGMEGGTAVATSSLTADNDFKPVGIGLPHSENNQDKGLPRPDNRDNRLEGNRGNSSSYRG 1022
Query: 121 -GQPH-RNARDHLVHSQLQSQPLELGLRGLLQQE------------IREHVLRGQLSDGH 166
GQ + RD + ++ + Q + G GL++QE RE + RG+ S
Sbjct: 1023 PGQSRMEDTRDKGLVNRGRGQAISRG-PGLVKQEDFRDKMMGRREDSREKMNRGEGSRDR 1081
Query: 167 GCGAPGSTRR---SGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDS 223
G PGS+R G ++ AA S P R S + P
Sbjct: 1082 GLVRPGSSREKVPGGLQGSQDRGAAGSRERGPPRRAG--------------SQERGPLRR 1127
Query: 224 AGLSRSLPPPPAG---RG---GAGTRELRFLRFH------PARPCKSPGRAR----HSDS 267
AG +PP AG RG G G+RE R P RP G + H D
Sbjct: 1128 AGSRERIPPRRAGSRERGPPRGPGSRERGLGRSDFGRDRGPFRPEPGDGGEKMYPYHRDE 1187
Query: 268 RLSRAPPGAGTTRGTKRFPL 287
RAP G RG + FPL
Sbjct: 1188 P-PRAPWNHGEERGHEEFPL 1206
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.9 bits (89), Expect = 0.007
Identities = 51/187 (27%), Positives = 69/187 (36%), Gaps = 31/187 (16%)
Query: 174 TRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHP-----------------ACLCVSV 216
+R YS RR PSP RP R +P P A L S
Sbjct: 304 SRSRSYSPRRR----PSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGS- 358
Query: 217 PQAPSDSAGLSRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGA 276
+ S S+ SRS P P R + R+ R L P SP R RH S + PP
Sbjct: 359 --SSSSSSSRSRSPPKKPPKRTSSPPRKTRRLS-----PSASPPRRRHRPSPPATPPPKT 411
Query: 277 GTTRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTR 336
+ ++ R +++ +G + + R S + PR VEL E +
Sbjct: 412 RHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPK--PRKVELSESEEDK 469
Query: 337 GGVGAAA 343
GG AAA
Sbjct: 470 GGKMAAA 476
>gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 38.1 bits (87), Expect = 0.012
Identities = 54/183 (29%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 172 GSTRRSGYSRRR-----ESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 226
G RR G +RR E+ P S RP RL+ L PA C+ V QA S A
Sbjct: 8 GGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPV-QAGSGRASR 66
Query: 227 SRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFP 286
R++ +GR +R L L HP P + R ++S PP
Sbjct: 67 RRAV-RRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAES----TPPH----------- 110
Query: 287 LALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRA 346
P + LA AA+ P+AP S G++R + RG + A R A A
Sbjct: 111 ---PHKLVLAPFAAS-------PSAPWSLGSVR--SLERGAAREQAACGRPAPLALVQEA 158
Query: 347 PRA 349
P A
Sbjct: 159 PGA 161
>gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 38.1 bits (87), Expect = 0.012
Identities = 54/183 (29%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 172 GSTRRSGYSRRR-----ESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 226
G RR G +RR E+ P S RP RL+ L PA C+ V QA S A
Sbjct: 8 GGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPV-QAGSGRASR 66
Query: 227 SRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFP 286
R++ +GR +R L L HP P + R ++S PP
Sbjct: 67 RRAV-RRVSGRWLPLSRPLLPLLSHPGWPDSASSRTLSAES----TPPH----------- 110
Query: 287 LALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDAVTRGGVGAAAFRA 346
P + LA AA+ P+AP S G++R + RG + A R A A
Sbjct: 111 ---PHKLVLAPFAAS-------PSAPWSLGSVR--SLERGAAREQAACGRPAPLALVQEA 158
Query: 347 PRA 349
P A
Sbjct: 159 PGA 161
>gi|23111007 hypothetical protein LOC79018 [Homo sapiens]
Length = 300
Score = 37.4 bits (85), Expect = 0.020
Identities = 39/101 (38%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 154 REHVLRG-QLSDGHGCG-APGST-RRSGYSRRRESCAAPSPSHRPGAR--LSLSLCLLPH 208
R V RG QL G C PGS R RR+ + PS H AR LSL LL
Sbjct: 4 RGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGS 63
Query: 209 PACLCVSVPQ----APSDSAGLSRSLPPPPAGRGGAGTREL 245
A V +P AP D A R+ PPPAG A L
Sbjct: 64 RAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASL 104
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 36.6 bits (83), Expect = 0.035
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 171 PGSTRRSGYSRRRESCAAPSP--SHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSR 228
P TR+ AP P S PG S P PA + + + D
Sbjct: 152 PPPTRQGSREMAGAFLVAPRPPYSRSPGGPESA-----PTPASVLPELRRGKQDLLSADS 206
Query: 229 SLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLA 288
LP G E+ R PA+P + PG A S SR +RAP TR P A
Sbjct: 207 GLPAVDQG-------EVAGPRLQPAQPLR-PG-AVPSASR-ARAPDTKAGTRARDPAPGA 256
Query: 289 LPLRAALAAEAAAGIALRSQPAAP 312
LRAA + G A R+Q AAP
Sbjct: 257 SQLRAAHSPHRGGGGAPRTQLAAP 280
>gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo
sapiens]
Length = 208
Score = 36.6 bits (83), Expect = 0.035
Identities = 61/207 (29%), Positives = 80/207 (38%), Gaps = 30/207 (14%)
Query: 142 ELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSL 201
ELG + E RE ++ Q + GH R G+ ++ E +P+P+ R R
Sbjct: 15 ELGRKDAKATETRESAVQRQGTAGHDL-------RKGHRKQLEDTGSPAPTIRAHTRRK- 66
Query: 202 SLCLLPHPACLCVSVPQAPSDSA-GLSRSLPPPPAGRGGAGTR---ELRFLRFHPARPCK 257
L P S AP A SR LP P G R RFL + RP
Sbjct: 67 --ALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRP-- 122
Query: 258 SPGRARHS--DSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPR-S 314
SP R S L ++ PG T G + + AAL A G A QP +PR
Sbjct: 123 SPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRQVLATGPA---QPTSPRLV 179
Query: 315 SGTMRGNQVPRGVELPEDAVTRGGVGA 341
S RG + R +RGG+ A
Sbjct: 180 SAWSRGARRERS--------SRGGIFA 198
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 36.6 bits (83), Expect = 0.035
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 171 PGSTRRSGYSRRRESCAAPSP--SHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSR 228
P TR+ AP P S PG S P PA + + + D
Sbjct: 152 PPPTRQGSREMAGAFLVAPRPPYSRSPGGPESA-----PTPASVLPELRRGKQDLLSADS 206
Query: 229 SLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLA 288
LP G E+ R PA+P + PG A S SR +RAP TR P A
Sbjct: 207 GLPAVDQG-------EVAGPRLQPAQPLR-PG-AVPSASR-ARAPDTKAGTRARDPAPGA 256
Query: 289 LPLRAALAAEAAAGIALRSQPAAP 312
LRAA + G A R+Q AAP
Sbjct: 257 SQLRAAHSPHRGGGGAPRTQLAAP 280
>gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo
sapiens]
Length = 208
Score = 36.6 bits (83), Expect = 0.035
Identities = 61/207 (29%), Positives = 80/207 (38%), Gaps = 30/207 (14%)
Query: 142 ELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSL 201
ELG + E RE ++ Q + GH R G+ ++ E +P+P+ R R
Sbjct: 15 ELGRKDAKATETRESAVQRQGTAGHDL-------RKGHRKQLEDTGSPAPTIRAHTRRK- 66
Query: 202 SLCLLPHPACLCVSVPQAPSDSA-GLSRSLPPPPAGRGGAGTR---ELRFLRFHPARPCK 257
L P S AP A SR LP P G R RFL + RP
Sbjct: 67 --ALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRP-- 122
Query: 258 SPGRARHS--DSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPR-S 314
SP R S L ++ PG T G + + AAL A G A QP +PR
Sbjct: 123 SPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRQVLATGPA---QPTSPRLV 179
Query: 315 SGTMRGNQVPRGVELPEDAVTRGGVGA 341
S RG + R +RGG+ A
Sbjct: 180 SAWSRGARRERS--------SRGGIFA 198
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 36.6 bits (83), Expect = 0.035
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 171 PGSTRRSGYSRRRESCAAPSP--SHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSR 228
P TR+ AP P S PG S P PA + + + D
Sbjct: 151 PPPTRQGSREMAGAFLVAPRPPYSRSPGGPESA-----PTPASVLPELRRGKQDLLSADS 205
Query: 229 SLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLA 288
LP G E+ R PA+P + PG A S SR +RAP TR P A
Sbjct: 206 GLPAVDQG-------EVAGPRLQPAQPLR-PG-AVPSASR-ARAPDTKAGTRARDPAPGA 255
Query: 289 LPLRAALAAEAAAGIALRSQPAAP 312
LRAA + G A R+Q AAP
Sbjct: 256 SQLRAAHSPHRGGGGAPRTQLAAP 279
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 36.6 bits (83), Expect = 0.035
Identities = 61/282 (21%), Positives = 93/282 (32%), Gaps = 42/282 (14%)
Query: 66 GFQTRSAVSSSAEQPPSNMNPQRQPDARRKNLER--------NSLSVLTNRDLLREGQRD 117
G++T+ SSSA PP ++ R + R +S + + +++ +RD
Sbjct: 153 GYRTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVKKHRRD 212
Query: 118 EQQGQPHRNARDHLVHSQLQSQPLELGLRGLLQQEIREHV-LRGQLSDGHGCGAPGSTRR 176
R R S+ + + +++ R H G+ S H G+ S
Sbjct: 213 RSDSGSRRKRRHRSRSSKCKRKEKN-------KEKKRPHTESPGRRSHRHSSGSSHSPSL 265
Query: 177 SGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAG 236
S + S + SP HR R + S S ++PS S G P G
Sbjct: 266 SSHYSDSRSPSRLSPKHRDEGRKTGS---------QRSSGSRSPSPSGGSGWGSPQRNGG 316
Query: 237 ---RGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRA 293
R GA P +P R R + + PP G + P + P
Sbjct: 317 SGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPS---PRSAPSSQ 373
Query: 294 ALAAEAAAGIA-----------LRSQPAAPRSSGTMRGNQVP 324
AA G RS +APR G R P
Sbjct: 374 GRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAP 415
Score = 31.6 bits (70), Expect = 1.1
Identities = 43/152 (28%), Positives = 52/152 (34%), Gaps = 35/152 (23%)
Query: 163 SDGHGCGAP----GSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQ 218
S G G G+P GS +RSG R P +H P + S + A P
Sbjct: 303 SGGSGWGSPQRNGGSGQRSGAHGGR-----PGSAHSPPDKPSSPSPRVRDKAAAAAPTPP 357
Query: 219 APSDSAGLSRSLPPPPA--GR--GGAGTRELRFLRFHPARPCKSPGRAR----------- 263
A + RS P GR GGAG R R R +R S R R
Sbjct: 358 ARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPR 417
Query: 264 -----------HSDSRLSRAPPGAGTTRGTKR 284
SDS R PG G G++R
Sbjct: 418 GSSRSLSRARSSSDSGSGRGAPGPGPEPGSER 449
Score = 30.4 bits (67), Expect = 2.5
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 9/108 (8%)
Query: 167 GCGAPGSTRRSGYSRRRESCAAPSPSH--RPGARLSLSLCLLPHPACLCVSVPQAPSDSA 224
G G G + R R + +PSP R G S P P S ++PS S
Sbjct: 450 GHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSR 509
Query: 225 GLSRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRA 272
S P R + + L +R GRARHS++ +RA
Sbjct: 510 SRSAEKRPHSPSRSPSPKKPL-------SRDKDGEGRARHSEAEATRA 550
>gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 36.2 bits (82), Expect = 0.045
Identities = 53/178 (29%), Positives = 69/178 (38%), Gaps = 21/178 (11%)
Query: 142 ELGLRGLLQQEIREHVLRGQLSDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSL 201
ELG + E RE ++ Q + GH R G+ ++ E +P+P+ R R
Sbjct: 15 ELGRKDAKATETRESAVQRQGTAGHDL-------RKGHRKQLEDTGSPAPTIRAHTRRK- 66
Query: 202 SLCLLPHPACLCVSVPQAPSDSA-GLSRSLPPPPAGRGGAGTR---ELRFLRFHPARPCK 257
L P S AP A SR LP P G R RFL + RP
Sbjct: 67 --ALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRP-- 122
Query: 258 SPGRARHS--DSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPR 313
SP R S L ++ PG T G + + AAL A G A QP +PR
Sbjct: 123 SPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPA---QPTSPR 177
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 35.4 bits (80), Expect = 0.077
Identities = 36/142 (25%), Positives = 50/142 (35%), Gaps = 16/142 (11%)
Query: 163 SDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSD 222
S G G+P R R S A P + G + C+ P
Sbjct: 729 SQARGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVP------------CLYKPHCHQS 776
Query: 223 SAGLSRSLPPPPAGRGGA-GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRG 281
S ++ P RGGA G E ++ P P K P A+ +D L G RG
Sbjct: 777 SLSREVAVVMPTLARGGAAGPGEPVEVKEPPGLPAKPPASAQPTDELLRHPVTGEVVERG 836
Query: 282 TKRFPLALPLRAALAAEAAAGI 303
+ P+AL L A A+ +
Sbjct: 837 S---PMALLLAARQRAQKGRSV 855
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 35.4 bits (80), Expect = 0.077
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 165 GHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSA 224
GH G+ GS R + +R + + AA SP A S P PA P+AP
Sbjct: 268 GHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGE---PRPA-----EPRAPPRPP 319
Query: 225 GLSRSLPPPPAGRGGAGTRELRFLRFH--PARPCKSP 259
+R PPPPA GA R LR R H ARP P
Sbjct: 320 PAARRPPPPPA--PGAPARPLRGRRSHGPAARPRAVP 354
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 35.4 bits (80), Expect = 0.077
Identities = 50/194 (25%), Positives = 66/194 (34%), Gaps = 36/194 (18%)
Query: 167 GCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 226
G +PG R CA PS PG L P P L ++P S G
Sbjct: 334 GPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPR-LRAALPSRRLFSRGA 392
Query: 227 SRSLPPPPAGRGGAGTRELRFLRFHPARPCK-SPGRARHSDSR--------LSRAPPGAG 277
++ LP + HP R P + +HS++R L P GA
Sbjct: 393 AQQLP--------------CCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQPVGAN 438
Query: 278 T----TRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDA 333
+ R + P P R AE L+ PA+ S Q P G +A
Sbjct: 439 SVERAARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPA---QAPSG-----EA 490
Query: 334 VTRGGVGAAAFRAP 347
R G GA R+P
Sbjct: 491 GRRAGGGAVGARSP 504
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 35.4 bits (80), Expect = 0.077
Identities = 36/142 (25%), Positives = 50/142 (35%), Gaps = 16/142 (11%)
Query: 163 SDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSD 222
S G G+P R R S A P + G + C+ P
Sbjct: 729 SQARGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVP------------CLYKPHCHQS 776
Query: 223 SAGLSRSLPPPPAGRGGA-GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRG 281
S ++ P RGGA G E ++ P P K P A+ +D L G RG
Sbjct: 777 SLSREVAVVMPTLARGGAAGPGEPVEVKEPPGLPAKPPASAQPTDELLRHPVTGEVVERG 836
Query: 282 TKRFPLALPLRAALAAEAAAGI 303
+ P+AL L A A+ +
Sbjct: 837 S---PMALLLAARQRAQKGRSV 855
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 35.4 bits (80), Expect = 0.077
Identities = 50/194 (25%), Positives = 66/194 (34%), Gaps = 36/194 (18%)
Query: 167 GCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGL 226
G +PG R CA PS PG L P P L ++P S G
Sbjct: 334 GPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPR-LRAALPSRRLFSRGA 392
Query: 227 SRSLPPPPAGRGGAGTRELRFLRFHPARPCK-SPGRARHSDSR--------LSRAPPGAG 277
++ LP + HP R P + +HS++R L P GA
Sbjct: 393 AQQLP--------------CCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQPVGAN 438
Query: 278 T----TRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDA 333
+ R + P P R AE L+ PA+ S Q P G +A
Sbjct: 439 SVERAARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPA---QAPSG-----EA 490
Query: 334 VTRGGVGAAAFRAP 347
R G GA R+P
Sbjct: 491 GRRAGGGAVGARSP 504
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 35.4 bits (80), Expect = 0.077
Identities = 36/142 (25%), Positives = 50/142 (35%), Gaps = 16/142 (11%)
Query: 163 SDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSD 222
S G G+P R R S A P + G + C+ P
Sbjct: 729 SQARGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVP------------CLYKPHCHQS 776
Query: 223 SAGLSRSLPPPPAGRGGA-GTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRG 281
S ++ P RGGA G E ++ P P K P A+ +D L G RG
Sbjct: 777 SLSREVAVVMPTLARGGAAGPGEPVEVKEPPGLPAKPPASAQPTDELLRHPVTGEVVERG 836
Query: 282 TKRFPLALPLRAALAAEAAAGI 303
+ P+AL L A A+ +
Sbjct: 837 S---PMALLLAARQRAQKGRSV 855
>gi|46391104 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 35.4 bits (80), Expect = 0.077
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 174 TRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSA-------GL 226
TRR+ + R A P P RP L L +L LC S P +P++++ G
Sbjct: 81 TRRTVLTPSRR--ALPGPCRRP----QLDLDILSSLIDLCDS-PVSPAEASRTPGRAEGA 133
Query: 227 SR----SLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPG 275
R + P PP ++R L PARPC SPG A S PPG
Sbjct: 134 GRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASS---PARPPG 183
>gi|108389127 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 35.4 bits (80), Expect = 0.077
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 174 TRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSA-------GL 226
TRR+ + R A P P RP L L +L LC S P +P++++ G
Sbjct: 81 TRRTVLTPSRR--ALPGPCRRP----QLDLDILSSLIDLCDS-PVSPAEASRTPGRAEGA 133
Query: 227 SR----SLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPG 275
R + P PP ++R L PARPC SPG A S PPG
Sbjct: 134 GRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASS---PARPPG 183
>gi|13937401 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 35.4 bits (80), Expect = 0.077
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 174 TRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSA-------GL 226
TRR+ + R A P P RP L L +L LC S P +P++++ G
Sbjct: 81 TRRTVLTPSRR--ALPGPCRRP----QLDLDILSSLIDLCDS-PVSPAEASRTPGRAEGA 133
Query: 227 SR----SLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPG 275
R + P PP ++R L PARPC SPG A S PPG
Sbjct: 134 GRPPPATPPRPPPSTSAVRRVDVRPLPASPARPCPSPGPAAASS---PARPPG 183
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 35.0 bits (79), Expect = 0.10
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Query: 189 PSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRGGAGTRELRFL 248
P ++ P AR S ++P P S P++P +A L PPA R L
Sbjct: 97 PRKTYAPPARASTRATMVPEPTSALPSDPRSP--AAWSDPGLRVPPAARAHLDNSSLGM- 153
Query: 249 RFHPARPCKSPGRARH--SDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAEAAAGIALR 306
++P SPG H S+ R RA P G+ R L L+ + R
Sbjct: 154 ----SQPRPSPGAFPHLSSEPRTPRAFPEPGSRVPPSRLECQQALSHWLSNQVPRRAGER 209
Query: 307 SQPA-APRS 314
PA APR+
Sbjct: 210 RCPAMAPRA 218
>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
Length = 671
Score = 35.0 bits (79), Expect = 0.10
Identities = 35/156 (22%), Positives = 53/156 (33%), Gaps = 5/156 (3%)
Query: 179 YSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAGRG 238
+ + + + A + PG L L L C+ P+A + S+ P PAG
Sbjct: 204 HRKDKRAKAEAAEGRAPGGGLILPGSLTASLECVKEETPRAAREPEEPSQDAPRDPAGEP 263
Query: 239 GAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPLRAALAAE 298
G PAR C+ H +R AG R P +R A A
Sbjct: 264 AGGEEVPAPADRAPARSCREAEGLAHPGDTGARGEDAAGHRRAE---PGPGEVRTAEDAS 320
Query: 299 AAAGIALRSQPAAPRSSGTMRGNQV--PRGVELPED 332
+ +++ P G+ R P V+ P D
Sbjct: 321 RTGAVPVKTVPLVDSEGGSGRAPAAPDPASVDPPSD 356
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 34.7 bits (78), Expect = 0.13
Identities = 34/120 (28%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 217 PQAPSDSAGLSRSLPPPPAGRGGAGTRELRFLRFHPARPCKSPGRARHSDSRLSRAPPGA 276
P P + G S LPPPP G GG P P P PP +
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGP-----------PMPPPPPP----------PPPPPSS 406
Query: 277 GTTRGTKRFPLALPL---------RAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGV 327
G P AL R AL + GI L P AP SS Q G+
Sbjct: 407 GNGPAPPPLPPALVPAGGLAPGGGRGALLDQIRQGIQLNKTPGAPESSALQPPPQSSEGL 466
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.7 bits (78), Expect = 0.13
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 233 PPAGRGGAGTRELRFLRFHPARP-CKSPGRARHSDSRLSRAPPGAGTTRGTKRFPLALPL 291
PPA A R R PA P C++PGR R + +R S AP GT RG+ +
Sbjct: 86 PPARASRAAGR-----RAGPAGPPCRAPGRGRAAATRRSPAP---GTARGS-----PAGV 132
Query: 292 RAALAAEAAAGIALRSQPA---APRSSGTMRG 320
A A AA+ RS PA P GT G
Sbjct: 133 ERAGGATAASSAGTRSVPARRLPPPCGGTSLG 164
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 34.7 bits (78), Expect = 0.13
Identities = 40/127 (31%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 219 APSDSAGLSRSLPPPPAGRGGAGTRELRFLRFHPARPCKS-PGRARHS--DSRLSRAPPG 275
+P+ AG + P GR G R P P P RAR S + SR PP
Sbjct: 159 SPAPKAGSPMAAAP---GRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRPPA 215
Query: 276 --AGTTRGTKRFPLALPLRAALAAEAAAGIALRSQPAAPRSSGTMRGNQVPRGVELPEDA 333
RG + P ALP RA A + G+ALR+ + G+ R ELPE
Sbjct: 216 PTVAAPRGLETRP-ALPRRAGAAVHGSEGLALRA-----KRRDANAGSGARRCRELPESW 269
Query: 334 VTRGGVG 340
+ R G
Sbjct: 270 ILRAAAG 276
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,348,060
Number of Sequences: 37866
Number of extensions: 925448
Number of successful extensions: 5017
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 355
Number of HSP's that attempted gapping in prelim test: 4724
Number of HSP's gapped (non-prelim): 645
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.