Guide to the Human Genome
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Name: LOC100129932 Sequence: fasta or formatted (415aa) NCBI GI: 239755684
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {351aa} PREDICTED: hypothetical protein
alt mRNA {415aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         39           3
 C cysteine            2.2          9           1
 D aspartate           3.6         15           1
 E glutamate           4.6         19           1
 F phenylalanine       2.4         10           1
 G glycine             8.4         35           2
 H histidine           3.4         14           1
 I isoleucine          2.4         10           1
 K lysine              2.2          9           1
 L leucine            10.8         45           2
 M methionine          1.4          6           1
 N asparagine          3.6         15           1
 P proline             8.4         35           4
 Q glutamine           6.0         25           2
 R arginine           11.1         46           3
 S serine             10.4         43           3
 T threonine           4.1         17           2
 V valine              4.6         19           1
 W tryptophan          0.7          3           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100129932          1.000   PREDICTED: hypothetical protein 
LOC100129932          0.845   PREDICTED: hypothetical protein 
FOXD1                 0.027   forkhead box D1 
YLPM1                 0.017   YLP motif containing 1 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
LOC730254             0.016   PREDICTED: hypothetical protein 
LOC730254             0.016   PREDICTED: hypothetical protein 
C17orf39              0.015   hypothetical protein LOC79018 
LOC401180             0.015   PREDICTED: similar to hCG1745223 
LOC100290691          0.015   PREDICTED: hypothetical protein XP_002347934 
LOC401180             0.015   PREDICTED: similar to hCG1745223 
LOC100288156          0.015   PREDICTED: hypothetical protein XP_002344202 
LOC401180             0.015   PREDICTED: similar to hCG1745223 
FLJ37078              0.015   hypothetical protein LOC222183 
LOC100292801          0.014   PREDICTED: hypothetical protein 
C6orf132              0.012   PREDICTED: chromosome 6 open reading frame 132 [Hom...
LOC100128074          0.012   PREDICTED: hypothetical protein 
LOC100290274          0.012   PREDICTED: hypothetical protein XP_002346984 
C6orf132              0.012   PREDICTED: chromosome 6 open reading frame 132 [Hom...
LOC100288645          0.012   PREDICTED: hypothetical protein XP_002342846 
C6orf132              0.012   PREDICTED: hypothetical protein LOC647024 
FAM110A               0.012   hypothetical protein LOC83541 
FAM110A               0.012   hypothetical protein LOC83541 
FAM110A               0.012   hypothetical protein LOC83541 
ARHGAP23              0.012   Rho GTPase activating protein 23 
FAM123A               0.012   hypothetical protein LOC219287 isoform 1 
WAS                   0.012   Wiskott-Aldrich syndrome protein 
LOC100293375          0.012   PREDICTED: hypothetical protein 
LOC100292568          0.012   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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