Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239743837
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743837 PREDICTED: hypothetical protein [Homo sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743837 PREDICTED: hypothetical protein [Homo sapiens] 426 e-120
gi|239743815 PREDICTED: hypothetical protein [Homo sapiens] 422 e-119
gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo ... 404 e-113
gi|239743851 PREDICTED: hypothetical protein [Homo sapiens] 393 e-110
gi|239743848 PREDICTED: hypothetical protein [Homo sapiens] 393 e-110
gi|239743746 PREDICTED: hypothetical protein [Homo sapiens] 393 e-110
gi|239758169 PREDICTED: hypothetical protein [Homo sapiens] 389 e-109
gi|239745046 PREDICTED: hypothetical protein [Homo sapiens] 82 3e-16
gi|160707881 formin 2 [Homo sapiens] 52 3e-07
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 43 1e-04
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 43 2e-04
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 43 2e-04
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 43 2e-04
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 43 2e-04
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 43 2e-04
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 43 2e-04
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 43 2e-04
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 43 2e-04
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 41 5e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 41 7e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 41 7e-04
gi|194097341 period 1 [Homo sapiens] 40 0.001
gi|41350201 epsin 1 isoform c [Homo sapiens] 39 0.002
gi|194248095 epsin 1 isoform b [Homo sapiens] 39 0.002
gi|194272148 epsin 1 isoform a [Homo sapiens] 39 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.003
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 38 0.004
gi|169213703 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|7706501 WW domain binding protein 11 [Homo sapiens] 38 0.006
gi|21361699 sphingosine kinase 2 [Homo sapiens] 37 0.007
>gi|239743837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 426 bits (1095), Expect = e-120
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
Query: 181 SCPWL 185
SCPWL
Sbjct: 181 SCPWL 185
>gi|239743815 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 422 bits (1085), Expect = e-119
Identities = 183/185 (98%), Positives = 184/185 (99%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESM+WPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMRWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL LDLALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLHLDLALVL 180
Query: 181 SCPWL 185
SCPWL
Sbjct: 181 SCPWL 185
>gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo
sapiens]
Length = 185
Score = 404 bits (1039), Expect = e-113
Identities = 175/185 (94%), Positives = 178/185 (96%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSL+LPCPSMPWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLVLPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCP P+LSPPCSGP LALALLLVLPLLWPCSVFG ALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPCPVLSPPCSGPVLALALLLVLPLLWPCSVFGHALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPG TLAFSTLALP PGLALPWPCPAMALALPCPCPGPGS+LLL LALVL
Sbjct: 121 PWPYHGLLLPWPGHTLAFSTLALPCPGLALPWPCPAMALALPCPCPGPGSALLLALALVL 180
Query: 181 SCPWL 185
SCPWL
Sbjct: 181 SCPWL 185
>gi|239743851 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 393 bits (1010), Expect = e-110
Identities = 175/185 (94%), Positives = 178/185 (96%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPGPTLAFSTLALPFPG+ALPWPCPA+ALAL P PGPGS+ L LALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALAL--PYPGPGSA--LTLALVL 176
Query: 181 SCPWL 185
SCPWL
Sbjct: 177 SCPWL 181
>gi|239743848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 393 bits (1010), Expect = e-110
Identities = 175/185 (94%), Positives = 178/185 (96%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPGPTLAFSTLALPFPG+ALPWPCPA+ALAL P PGPGS+ L LALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALAL--PYPGPGSA--LTLALVL 176
Query: 181 SCPWL 185
SCPWL
Sbjct: 177 SCPWL 181
>gi|239743746 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 393 bits (1010), Expect = e-110
Identities = 175/185 (94%), Positives = 178/185 (96%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPGPTLAFSTLALPFPG+ALPWPCPA+ALAL P PGPGS+ L LALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALAL--PYPGPGSA--LTLALVL 176
Query: 181 SCPWL 185
SCPWL
Sbjct: 177 SCPWL 181
>gi|239758169 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 389 bits (999), Expect = e-109
Identities = 171/185 (92%), Positives = 176/185 (95%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSL+LPCPS+PWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLVLPCPSVPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGP+LSPPCSGPALALALLLVLPLLWPCSVFG ALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPVLSPPCSGPALALALLLVLPLLWPCSVFGHALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
PWPYHGLLLPWPGPTLAFSTLALPFP LALPWPCP +ALAL P PGPGS+ L LALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPDLALPWPCPTLALAL--PYPGPGSA--LTLALVL 176
Query: 181 SCPWL 185
SCPWL
Sbjct: 177 SCPWL 181
>gi|239745046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 81.6 bits (200), Expect = 3e-16
Identities = 67/175 (38%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
PSPG L L PS P+P L + W C LA PW PG A LPW P P +
Sbjct: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPW----TCPGPALTLPWLLPCPHYGL 62
Query: 66 KWPWTCLAILCPGPILSP---PCSGPALALALLLVLPLLWPCSVFGRA-LCYPSPALPWP 121
LA++ P P P P ALALA LVL P S A LC P P
Sbjct: 63 A---LALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDP 119
Query: 122 WPYHGLLLPWPGPTLA--------FSTLALPFPGLALPWPCPAM--ALALPCPCP 166
P+ L P+PGP LA + L + LPWP A ALALP P P
Sbjct: 120 DPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
Score = 80.1 bits (196), Expect = 1e-15
Identities = 67/174 (38%), Positives = 80/174 (45%), Gaps = 31/174 (17%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSC--PALALPWPRPCLLPGLAFAL---- 54
+ L WPS +L P + WPC LA W+C PAL LPW PC GLA AL
Sbjct: 13 LALSWPSGAIALPYPELVVLWPC--LVLAAPWTCPGPALTLPWLLPCPHYGLALALALVL 70
Query: 55 --PWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALC 112
PWP P P + P LA L +LS C A+ALALL ++P P AL
Sbjct: 71 PYPWPCPYPGPA---PAAALA-LAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALH 126
Query: 113 YPSP----ALPWPWPYH-------GLLLPWPGPTLAFSTLALPFPGLALPWPCP 155
+P P A+ PW H G ++ P P AF P LALPWP P
Sbjct: 127 WPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFD------PALALPWPSP 174
Score = 71.2 bits (173), Expect = 5e-13
Identities = 62/175 (35%), Positives = 68/175 (38%), Gaps = 53/175 (30%)
Query: 22 PCPHPALALHWSCPALALPWPRPCLL-PGLAFALPWPDPRPTESMKWPWTCLAILCPGPI 80
P P LAL W A+ALP+P +L P L A PW P P ++ W
Sbjct: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLL----------- 55
Query: 81 LSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGPTLAFST 140
PC LALAL LVLP WPC YP PA P L L W
Sbjct: 56 ---PCPHYGLALALALVLPYPWPCP-------YPGPA-----PAAALALAW--------- 91
Query: 141 LALPFPGLALPWPCP--AMALALPCPCPGPGSSLLLDLA---------LVLSCPW 184
L L CP AMALAL C PGP LA L + CPW
Sbjct: 92 ------NLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALHWPFPGPELAVVCPW 140
Score = 50.8 bits (120), Expect = 6e-07
Identities = 32/70 (45%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 128 LLPWPGPTLAFS----TLALPFPGL---------ALPWPCPAMALALPCPCPGPGSSLLL 174
+LP PG LA S +ALP+P L A PW CP AL LP P P L L
Sbjct: 5 VLPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLAL 64
Query: 175 DLALVLSCPW 184
LALVL PW
Sbjct: 65 ALALVLPYPW 74
Score = 48.9 bits (115), Expect = 2e-06
Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 20/102 (19%)
Query: 98 LPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPW--PCP 155
LP+L P AL +PS A+ P+P L++ WP LA + P P L LPW PCP
Sbjct: 3 LPVL-PSPGTDLALSWPSGAIALPYPE--LVVLWPCLVLA-APWTCPGPALTLPWLLPCP 58
Query: 156 ----AMALAL----PCPCPGPG----SSLLLDLALVLS--CP 183
A+ALAL P PCP PG ++L L LVLS CP
Sbjct: 59 HYGLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCP 100
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 52.0 bits (123), Expect = 3e-07
Identities = 52/163 (31%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 18 SMPWPCPHPALALHWSCPALALPWPRPCLLPGLAF------ALPWPDP-RPTESMKWPWT 70
++P P P P S P L + P P LPG+ A+P P P + TE + P
Sbjct: 854 NIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPP 913
Query: 71 CLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLP 130
L PG + PP P L A +L LP L P +P P P G +P
Sbjct: 914 PL----PGAGIPPP---PPLPGAGILPLPPL------------PGAGIPPPPPLPGAAIP 954
Query: 131 WPGPTL-AFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL 172
P P A L P PG +P P P +P P P PG+ +
Sbjct: 955 PPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 997
Score = 43.9 bits (102), Expect = 8e-05
Identities = 52/176 (29%), Positives = 65/176 (36%), Gaps = 42/176 (23%)
Query: 4 PWPSPGPSLILPCPSMPW---PCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
P P PG ILP P +P P P P P A+P P P LPG +P P P
Sbjct: 923 PPPLPGAG-ILPLPPLPGAGIPPPPPL-------PGAAIPPPPP--LPGAG--IPLPPPL 970
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP---- 116
P + P PG + PP P + LP G + P P
Sbjct: 971 PGAGIPPPPPL-----PGAGIPPPPPLPGAGIPPPPPLP--------GAGIPPPPPLPGA 1017
Query: 117 ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL 172
+P P P G +P P P PG +P P P +P P P PG+ +
Sbjct: 1018 GIPPPPPLPGAGIPPPPP----------LPGAGIPPPPPLPGAGIPPPPPLPGAGI 1063
Score = 43.5 bits (101), Expect = 1e-04
Identities = 55/184 (29%), Positives = 68/184 (36%), Gaps = 29/184 (15%)
Query: 1 MTLPWPSPGPSLILPC-PSMPWPCPHPALALHW------SCPALALPWPRPCLLPGLAFA 53
M P P P P + +P PS P P P P +P P P LPG A
Sbjct: 875 MVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPP--LPG-AGI 931
Query: 54 LPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCY 113
LP P P P + P PG + PP P + L LP G +
Sbjct: 932 LPLP-PLPGAGIPPPPPL-----PGAAIPPPPPLPGAGIPLPPPLP--------GAGIPP 977
Query: 114 PSP----ALPWPWPYHGLLLPWPGPTL-AFSTLALPFPGLALPWPCPAMALALPCPCPGP 168
P P +P P P G +P P P A P PG +P P P +P P P P
Sbjct: 978 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1037
Query: 169 GSSL 172
G+ +
Sbjct: 1038 GAGI 1041
Score = 43.1 bits (100), Expect = 1e-04
Identities = 52/181 (28%), Positives = 69/181 (38%), Gaps = 19/181 (10%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P P P LPG +P P P
Sbjct: 1033 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA--GIPPPPP 1090
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLP---LLWPCSVFGRALCYPSP 116
P + P PG + PP P + LP + P + G + P P
Sbjct: 1091 LPGAGIPPPPP-----LPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1145
Query: 117 ----ALPWPWPYHGLLLPWPGPTL-AFSTLALPFPGLALPWPCPAMALALPCPCPGPGSS 171
+P P P G +P P P A P PG+ +P P P + +P P P PG+
Sbjct: 1146 LPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAG 1205
Query: 172 L 172
+
Sbjct: 1206 I 1206
Score = 43.1 bits (100), Expect = 1e-04
Identities = 50/180 (27%), Positives = 67/180 (37%), Gaps = 28/180 (15%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P P P LPG+ +P P P
Sbjct: 1055 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV--GIPPPPP 1112
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLW---PCSVFGRALCYPSP 116
P + P PG + PP P + LP + P + G + P P
Sbjct: 1113 LPGAGIPPPPP-----LPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP 1167
Query: 117 ----ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL 172
+P P P G+ +P P P PG+ +P P P +P P P PG +
Sbjct: 1168 LPGAGIPPPPPLPGVGIPPPP----------PLPGVGIPPPPPLPGAGIPPPPPLPGMGI 1217
Score = 42.4 bits (98), Expect = 2e-04
Identities = 51/178 (28%), Positives = 65/178 (36%), Gaps = 24/178 (13%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P P P LPG +P P P
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA--GIPPPPP 1057
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P PG + PP P + LP G + P P
Sbjct: 1058 LPGAGIPPPPP-----LPGAGIPPPPPLPGAGIPPPPPLP--------GAGIPPPPPLPG 1104
Query: 117 -ALPWPWPYHGLLLPWPGPTL-AFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL 172
+P P P G +P P P A P PG +P P P + +P P P PG+ +
Sbjct: 1105 VGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGI 1162
Score = 41.6 bits (96), Expect = 4e-04
Identities = 50/174 (28%), Positives = 62/174 (35%), Gaps = 31/174 (17%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P P P LPG +P P P
Sbjct: 1022 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA--GIPPPPP 1079
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P PG + PP P + + LP G + P P
Sbjct: 1080 LPGAGIPPPPP-----LPGAGIPPPPPLPGVGIPPPPPLP--------GAGIPPPPPLPG 1126
Query: 117 -ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPG 169
+P P P G +P P P LP G+ P P P + P P PG G
Sbjct: 1127 AGIPPPPPLPGAGIPPPPP--------LPRVGIPPPPPLPGAGIPPPPPLPGAG 1172
Score = 40.8 bits (94), Expect = 7e-04
Identities = 51/178 (28%), Positives = 65/178 (36%), Gaps = 35/178 (19%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + + P P P LPG +P P P
Sbjct: 1077 PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGA--GIPPPPP 1134
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P + P P PP G + P + G + P P
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPP---PPLPGAGIPP----------PPPLPGAGIPPPPPLPG 1181
Query: 117 -ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMAL----ALPCPCPGPG 169
+P P P G+ +P P P LP G+ P P P M + A P P PG G
Sbjct: 1182 VGIPPPPPLPGVGIPPPPP--------LPGAGIPPPPPLPGMGIPPAPAPPLPPPGTG 1231
Score = 38.9 bits (89), Expect = 0.003
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 54 LPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCY 113
+P P P P L ++ P P PP G + +P P + G +
Sbjct: 855 IPSPPPLPCTESSSSMPGLGMVPPPP---PPLPGMTVPTLPSTAIPQ--PPPLQGTEMLP 909
Query: 114 PSPALPWPWPYHGLLLPWPGPTLAFSTLALP-FPGLALPWPCPAMALALPCPCPGPGSSL 172
P P P G +P P P L LP PG +P P P A+P P P PG+ +
Sbjct: 910 PPPP-----PLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGI 964
Query: 173 LL 174
L
Sbjct: 965 PL 966
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 43.1 bits (100), Expect = 1e-04
Identities = 53/178 (29%), Positives = 67/178 (37%), Gaps = 44/178 (24%)
Query: 8 PGPSLILPCPSMPWPCPHPALAL---HWSCPALALPWPRPCLLPGLAFALPWPDPRPTES 64
P +L P PS P P P A L + ALA P P P A P P P
Sbjct: 1551 PASALASPFPSAPNPAPAQASLLAPASSASQALATPLA-PMAAPQTAILAPSPAPP---- 1605
Query: 65 MKWPWTCLAILCPGPILSP-PCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
L P P+L+P P + P LA + V P++ P S G +L SP
Sbjct: 1606 ----------LAPLPVLAPSPGAAPVLASSQTPV-PVMAPSSTPGTSLASASP------- 1647
Query: 124 YHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVLS 181
+P P P LA S+ P +P P P P S+ L LA L+
Sbjct: 1648 -----VPAPTPVLAPSSTQTMLPA------------PVPSPLPSPASTQTLALAPALA 1688
Score = 39.7 bits (91), Expect = 0.001
Identities = 50/173 (28%), Positives = 61/173 (35%), Gaps = 28/173 (16%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
PSP P P +P P P A + +P P PG + A P P PT +
Sbjct: 1600 PSPAP----PLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVL 1655
Query: 66 KWPWTCLAILCPGPILSP---PCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPW 122
T + P P+ SP P S LALA L +P L
Sbjct: 1656 APSST--QTMLPAPVPSPLPSPASTQTLALAPAL------------------APTLGGSS 1695
Query: 123 PYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALAL-PCPCPGPGSSLLL 174
P L L P F T L + P PA L+L P P GP +L L
Sbjct: 1696 PSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSL 1748
Score = 37.7 bits (86), Expect = 0.006
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 71 CLAILCPGPILSPP---CSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGL 127
C +L P L+ P PA A A LL P S +AL +P P P +
Sbjct: 1545 CSPVLVPASALASPFPSAPNPAPAQASLLA-----PASSASQALA--TPLAPMAAPQTAI 1597
Query: 128 LLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL 172
L P P P LA + P PG A + + P PG+SL
Sbjct: 1598 LAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSL 1642
Score = 35.8 bits (81), Expect = 0.022
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 77 PG-PILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH-GLLLPWPGP 134
PG P+L P S L V P P V AL P P+ P P P LL P
Sbjct: 1521 PGHPLLLAPTSSHVPGLNST-VAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSA 1579
Query: 135 TLAFST----LALPFPGLALPWPCPAMALALPCPCPGPGSSLLL 174
+ A +T +A P + P P P +A LP P PG++ +L
Sbjct: 1580 SQALATPLAPMAAPQTAILAPSPAPPLA-PLPVLAPSPGAAPVL 1622
Score = 32.7 bits (73), Expect = 0.18
Identities = 44/165 (26%), Positives = 55/165 (33%), Gaps = 32/165 (19%)
Query: 22 PCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESMKWPWTCLAILCPGPIL 81
P P P L+ A P P P +LP P P P PGP+L
Sbjct: 1026 PPPGPELS------AQPTPGPVPQVLPASLMVSASPAGPPLIPASRP--------PGPVL 1071
Query: 82 SPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW----PWPYHGLLLPWPGPTLA 137
PP + +L +L PL V P+P L P P P PG +
Sbjct: 1072 LPPLQPNSGSLPQVLPSPL----GVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSL 1127
Query: 138 FSTLALPFPGLALP---------WPCPAMALALPCPCPGPGSSLL 173
L +P PG P A A+P P P P +L
Sbjct: 1128 LKPLTVP-PGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLIL 1171
Score = 27.7 bits (60), Expect = 5.9
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 16/112 (14%)
Query: 3 LPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPT 62
+P +P P ILP +P P P P+ S PA C P P P P
Sbjct: 2466 VPISAPNPITILPVHILPSP-PPPSQIPPCSSPA--------CTPPPACTPPPAHTPPPA 2516
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP 114
+ TCL + P+L P S P A L L L + +AL P
Sbjct: 2517 Q------TCL-VTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQALASP 2561
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1747 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1793
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1794 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1841
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1724 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1770
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1771 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1818
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1727 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1773
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1774 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1821
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1707 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1753
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1754 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1801
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1744 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1790
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1791 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1838
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1678 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1724
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1725 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1772
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1749 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1795
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1796 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1843
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134
L P P +SPP PA A PL P + +L P P+ P + LP P P
Sbjct: 1754 LPPPPPISPPSPPPAPA-------PLAPPPDISPFSLFCPPPSPP------SIPLPLPPP 1800
Query: 135 T---LAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALV 179
T L+ ST P P L P+P P PCP P S+ L V
Sbjct: 1801 TFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECV 1848
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 41.2 bits (95), Expect = 5e-04
Identities = 57/180 (31%), Positives = 74/180 (41%), Gaps = 42/180 (23%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPG-LAFALPWPDPRPTES 64
P+PGP +P P+ P P P P ++ +P P P + G ++ P P P P
Sbjct: 174 PNPGP---IPGPN-PGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPI-- 227
Query: 65 MKWPWTCLAILCPGPILSP-------PCSGPALALALLLVLPLLWPCSVFGRALC-YPSP 116
PGPI P P SGP L + P+ P S G + PSP
Sbjct: 228 ------------PGPISGPNPGPIPGPISGPNPGL---IPGPIPGPISGPGPIIGPIPSP 272
Query: 117 A-LPWPWPYHGLLLPWPGPTLAFSTLALP--FPGLAL---PWPCPAMALALPCPCPGPGS 170
A +P P G PGP L+ + P PGLA P P ++P P PGPGS
Sbjct: 273 AQIPGPGRLQG-----PGPILSPGRMRSPGSLPGLAPILGPGSGPGSG-SVPAPIPGPGS 326
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 40.8 bits (94), Expect = 7e-04
Identities = 31/77 (40%), Positives = 35/77 (45%), Gaps = 13/77 (16%)
Query: 99 PLLWPCSVFGRALCYPSPALPWPWPYHG-----LLLPWPGPTLAFSTLALPFPGLALPW- 152
PL FG A P PA P P P G LP P P+ +LP G+ P
Sbjct: 919 PLQTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPS------SLPAQGVPTPLA 972
Query: 153 PCPAMALALPCPCPGPG 169
P PAM +P PCPGPG
Sbjct: 973 PSPAMQPPVP-PCPGPG 988
Score = 30.0 bits (66), Expect = 1.2
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPW---PRPCLLPGLAFALPWPDPR 60
P PSP P P S+P P P S PA +P P P + P + P P
Sbjct: 939 PLPSPTPGESPPASSLPQPEPS-------SLPAQGVPTPLAPSPAMQPPVP-PCPGPGLE 990
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPA 89
+ + +W P +L P +G A
Sbjct: 991 SSAASRWNGETEPPAAPAALLKVPGAGTA 1019
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 40.8 bits (94), Expect = 7e-04
Identities = 31/77 (40%), Positives = 35/77 (45%), Gaps = 13/77 (16%)
Query: 99 PLLWPCSVFGRALCYPSPALPWPWPYHG-----LLLPWPGPTLAFSTLALPFPGLALPW- 152
PL FG A P PA P P P G LP P P+ +LP G+ P
Sbjct: 1001 PLQTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPS------SLPAQGVPTPLA 1054
Query: 153 PCPAMALALPCPCPGPG 169
P PAM +P PCPGPG
Sbjct: 1055 PSPAMQPPVP-PCPGPG 1070
Score = 30.0 bits (66), Expect = 1.2
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPW---PRPCLLPGLAFALPWPDPR 60
P PSP P P S+P P P S PA +P P P + P + P P
Sbjct: 1021 PLPSPTPGESPPASSLPQPEPS-------SLPAQGVPTPLAPSPAMQPPVP-PCPGPGLE 1072
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPA 89
+ + +W P +L P +G A
Sbjct: 1073 SSAASRWNGETEPPAAPAALLKVPGAGTA 1101
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 40.0 bits (92), Expect = 0.001
Identities = 50/169 (29%), Positives = 59/169 (34%), Gaps = 56/169 (33%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
PSP P PS PWP P PA PA+ P+P P P P P P
Sbjct: 859 PSPVP------PSTPWPTP-PATT---PFPAVVQPYPLPVFSP-----RGGPQPLP---- 899
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWP--WP 123
P P PP + PA LV P++ AL P+ P P +P
Sbjct: 900 -----------PAPTSVPPAAFPA-----PLVTPMV--------ALVLPNYLFPTPSSYP 935
Query: 124 YHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSL 172
Y L P GP P A P P++ P P P S L
Sbjct: 936 YGALQTPAEGP-----------PTPASHSPSPSLPALAPSPPHRPDSPL 973
Score = 32.7 bits (73), Expect = 0.18
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 18/101 (17%)
Query: 4 PWPSPGPSLILPCPSMPWPC--------PHPALALHWSCPALALPWPRPCLLPGLAFALP 55
PWP+P + P P+P P P S P A +P P + P +A LP
Sbjct: 867 PWPTPPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPTSVPPAA--FPAPLVTPMVALVLP 924
Query: 56 -WPDPRPTESMKWPWTCLAILCPGPIL----SPPCSGPALA 91
+ P P+ +P+ L GP SP S PALA
Sbjct: 925 NYLFPTPS---SYPYGALQTPAEGPPTPASHSPSPSLPALA 962
>gi|41350201 epsin 1 isoform c [Homo sapiens]
Length = 550
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
P+P P+ + PW P P A + + PW P + P A PW P PT +
Sbjct: 242 PAPAPT------TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPA---ADPWGGPAPTPAS 292
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
PW A GP + P PA A A P W S G + PS + PW P
Sbjct: 293 GDPWRPAA--PAGPSVDPWGGTPAPA-AGEGPTPDPWGSSDGGVPVSGPSASDPWT-PAP 348
Query: 126 GLLLPWPGPTLAFST 140
PW G ST
Sbjct: 349 AFSDPWGGSPAKPST 363
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
P+P P+ + PW P P A + + PW P + P A PW P PT +
Sbjct: 267 PAPAPT------TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPA---ADPWGGPAPTPAS 317
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
PW A GP + P PA A A P W S G + PS + PW P
Sbjct: 318 GDPWRPAA--PAGPSVDPWGGTPAPA-AGEGPTPDPWGSSDGGVPVSGPSASDPWT-PAP 373
Query: 126 GLLLPWPGPTLAFST 140
PW G ST
Sbjct: 374 AFSDPWGGSPAKPST 388
>gi|194272148 epsin 1 isoform a [Homo sapiens]
Length = 662
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
P+P P+ + PW P P A + + PW P + P A PW P PT +
Sbjct: 353 PAPAPT------TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPA---ADPWGGPAPTPAS 403
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
PW A GP + P PA A A P W S G + PS + PW P
Sbjct: 404 GDPWRPAA--PAGPSVDPWGGTPAPA-AGEGPTPDPWGSSDGGVPVSGPSASDPWT-PAP 459
Query: 126 GLLLPWPGPTLAFST 140
PW G ST
Sbjct: 460 AFSDPWGGSPAKPST 474
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 8 PGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESMKW 67
PGP+L PC P CP S A P+P P + +P+P ++
Sbjct: 41 PGPTLPPPCSPAPQQCP-------LSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPL 93
Query: 68 PWTCLAILCPGPILSPPCSGPALALALLLVLPLL 101
A ++ PP S ALALA ++ P L
Sbjct: 94 GTAPEAPTFLPNLIGPPISPAALALASPMIAPTL 127
Score = 29.6 bits (65), Expect = 1.5
Identities = 54/184 (29%), Positives = 63/184 (34%), Gaps = 31/184 (16%)
Query: 2 TLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR- 60
TLP P GP+ PS+ PA A P P+ +P A P P+
Sbjct: 1063 TLPSPKGGPAT----PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP---PSPKG 1115
Query: 61 --PTESMKWPWTCLAILCPGP---ILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP- 114
T K T A P P + +PP G P P S G P
Sbjct: 1116 GLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT-------PAATPPSPKGGLATPPP 1168
Query: 115 -----SPALPWPWPYHGLLLPWP--GPTLAFSTLALPFPGLALPWP--CPAMALALPCPC 165
+PA P P GL P P PT +T P GLA P P P A P P
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP-PS 1227
Query: 166 PGPG 169
P G
Sbjct: 1228 PKGG 1231
Score = 29.6 bits (65), Expect = 1.5
Identities = 51/177 (28%), Positives = 59/177 (33%), Gaps = 28/177 (15%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
PSP + + P + P P A H P P P A P P PT
Sbjct: 1097 PSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPS---PKGGLATPPPKGAPTTPA 1153
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP-------AL 118
P + G + +PP G P P S G L PSP A
Sbjct: 1154 ATPPSP-----KGGLATPPPKGAPTT-------PAATPPSPKG-GLATPSPKGAPTTPAA 1200
Query: 119 PWPWPYHGLLLPWP--GPTLAFSTLALPFPGLALPWPCPA---MALALPCPCPGPGS 170
P P GL P P PT +T P GLA P P A A P P GP +
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Score = 28.9 bits (63), Expect = 2.6
Identities = 30/99 (30%), Positives = 36/99 (36%), Gaps = 18/99 (18%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGL---------- 50
+ LP+P GP+ P P PAL++ S P A P P +P
Sbjct: 891 VNLPFPKEGPAT-------PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPP 943
Query: 51 AFALPWPDPRP-TESMKWPWTCLAILCPGPILSPPCSGP 88
A P P P T S KW T A P P P P
Sbjct: 944 AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982
Score = 28.1 bits (61), Expect = 4.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 114 PSPALPWPWPYHGLLLPWPGPTLAFSTLALPFP--GLALPWPCPAMALALPCPCP 166
P+P+ P G+ LP P T S + LPFP G A P P A AL++ P
Sbjct: 865 PTPSAVTPLSPKGVTLP-PKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSP 918
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 38.1 bits (87), Expect = 0.004
Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 44/179 (24%)
Query: 2 TLPWPSPGPSLILPC----PSMPWPCPH--------PALALHWSCPALALPWPRPCLLPG 49
T P P+P P+ PC P P P P+ P A H + +P P + P
Sbjct: 895 TAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQ 954
Query: 50 LAFALPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGR 109
P P P P+++ P P P LPL P +
Sbjct: 955 ---PQPHPQPHPSQAFG----------PQPPQQP--------------LPLQHPHLFPPQ 987
Query: 110 ALCYPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGP 168
A P P+P+ +L P P L +PG A P PA + ALP P PGP
Sbjct: 988 APGLLPPQSPYPYAPQPGVLGQPPPPLHTQL----YPGPAQD-PLPAHSGALPFPSPGP 1041
Score = 36.2 bits (82), Expect = 0.017
Identities = 55/174 (31%), Positives = 62/174 (35%), Gaps = 33/174 (18%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLA-FALPWPDPRPT 62
P P GP P P PHP+ A P LP P L P A LP P P
Sbjct: 947 PAPRIGPQ------PQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPY 1000
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPW 122
PG + PP P L L P P AL +PSP P P
Sbjct: 1001 APQ-----------PGVLGQPP---PPLH-TQLYPGPAQDPLPAHSGALPFPSPGPPQP- 1044
Query: 123 PYHGLLL-PWP-----GPTLAFSTLALP-FPGLALPWPCPAMALALPCPCPGPG 169
P+ L P P GP A T+ P G + P P + P P PGPG
Sbjct: 1045 PHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSP---HLVPSPAPSPGPG 1095
>gi|169213703 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 37.7 bits (86), Expect = 0.006
Identities = 57/194 (29%), Positives = 71/194 (36%), Gaps = 29/194 (14%)
Query: 7 SPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESMK 66
SP +LP S+ +P HP L L + PA P P LL A + P
Sbjct: 62 SPTRPRLLP-RSLGYPLRHP-LDLGFQGPASVRPPSTPHLLSASALSAQLDSPARPHPRC 119
Query: 67 WPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP------------ 114
+P A+ P PP G + P P +F RA P
Sbjct: 120 YP--PFALSAP----RPPALGASATAFRSSSDPPARP-RLFRRASASPAQLRLPSRLASA 172
Query: 115 -SPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPC---PCPGPGS 170
S L P P +LPW +L+ S L LP P WP + ALP PC P +
Sbjct: 173 LSAQLRLPHPSSPGVLPWRCLSLSVSDLKLPLPP---SWPWLGFSAALPAAFRPCSAPPA 229
Query: 171 -SLLLDLALVLSCP 183
LL LAL P
Sbjct: 230 WPRLLPLALAFPVP 243
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 37.7 bits (86), Expect = 0.006
Identities = 49/167 (29%), Positives = 55/167 (32%), Gaps = 43/167 (25%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPW---PDPRPT 62
P PGP + P P+ P P P L P A P+ RP +PGL LP P P P
Sbjct: 406 PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPG 465
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPW 122
PGP PP P G P P LP P
Sbjct: 466 RP------------PGPPPGPPPGLPP------------------GPPPRGPPPRLPPPA 495
Query: 123 PYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPG 169
P G+ P PG + P L P L P P P PG
Sbjct: 496 P-PGIPPPRPG---------MMRPPLVPPLGPAPPGLFPPAPLPNPG 532
>gi|21361699 sphingosine kinase 2 [Homo sapiens]
Length = 654
Score = 37.4 bits (85), Expect = 0.007
Identities = 50/166 (30%), Positives = 60/166 (36%), Gaps = 43/166 (25%)
Query: 7 SPGPSLILPCPSMPW---PCPHPALA---LHWSCPALALPWPRPCLL-PGLAFALPWPDP 59
SP P+ LP P P P +A LH S L LP P+P L PG P+P
Sbjct: 387 SPTPAHSLPRAKSELTLTPDPAPPMAHSPLHRSVSDLPLPLPQPALASPGS------PEP 440
Query: 60 RPTESMK---------WPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRA 110
P S+ W A L P P+LS P P AL
Sbjct: 441 LPILSLNGGGPELAGDWGGAGDAPLSPDPLLSSPPGSPKAAL---------------HSP 485
Query: 111 LCYPSPALPWPWPYHGLLLPWPGPTLAFSTLALP---FPGLALPWP 153
+ +P +P P GL LP P + ST P P L P P
Sbjct: 486 VSEGAPVIP---PSSGLPLPTPDARVGASTCGPPDHLLPPLGTPLP 528
Score = 30.4 bits (67), Expect = 0.91
Identities = 39/126 (30%), Positives = 48/126 (38%), Gaps = 25/126 (19%)
Query: 3 LPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPT 62
LP P P P+L P P P P L+L+ P LA W G A PDP +
Sbjct: 423 LPLPLPQPALASPGS----PEPLPILSLNGGGPELAGDW------GGAGDAPLSPDPLLS 472
Query: 63 ESMKWPWTCL-AILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPS----PA 117
P L + + G + PP SG LPL P + G + C P P
Sbjct: 473 SPPGSPKAALHSPVSEGAPVIPPSSG----------LPLPTPDARVGASTCGPPDHLLPP 522
Query: 118 LPWPWP 123
L P P
Sbjct: 523 LGTPLP 528
Score = 27.7 bits (60), Expect = 5.9
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 108 GRALCYPSPALPW-PWPYHGL--------LLPWPGPTLAFSTLALPFPGLALPWPCPAMA 158
GR P+ P P P H L L P P P +A S L L LP P PA+A
Sbjct: 374 GRLSYLPATVEPASPTPAHSLPRAKSELTLTPDPAPPMAHSPLHRSVSDLPLPLPQPALA 433
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.147 0.585
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,835,996
Number of Sequences: 37866
Number of extensions: 925208
Number of successful extensions: 5502
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 4012
Number of HSP's gapped (non-prelim): 891
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.