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Search of human proteins with 239743666
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743666 PREDICTED: hypothetical protein XP_002342940
isoform 2 [Homo sapiens]
(465 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743666 PREDICTED: hypothetical protein XP_002342940 isofor... 928 0.0
gi|239743664 PREDICTED: hypothetical protein XP_002342939 isofor... 923 0.0
gi|167466201 WAS protein family homolog 1 [Homo sapiens] 903 0.0
gi|110431370 espin [Homo sapiens] 60 3e-09
gi|33356148 formin-like 1 [Homo sapiens] 56 8e-08
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 54 2e-07
gi|7706687 Enah/Vasp-like [Homo sapiens] 54 4e-07
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 51 2e-06
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 51 2e-06
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 51 2e-06
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 51 2e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 50 6e-06
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 49 7e-06
gi|153792074 proline rich 12 [Homo sapiens] 49 7e-06
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 49 1e-05
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 49 1e-05
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 49 1e-05
gi|157168329 formin 1 [Homo sapiens] 49 1e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 49 1e-05
gi|52485606 formin-like 2 [Homo sapiens] 49 1e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 48 2e-05
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 48 2e-05
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 48 2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 3e-05
gi|31543535 R3H domain containing 1 [Homo sapiens] 47 3e-05
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 47 4e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 47 5e-05
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 46 6e-05
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 46 6e-05
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 46 6e-05
>gi|239743666 PREDICTED: hypothetical protein XP_002342940 isoform 2
[Homo sapiens]
Length = 465
Score = 928 bits (2399), Expect = 0.0
Identities = 465/465 (100%), Positives = 465/465 (100%)
Query: 1 MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS 60
MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS
Sbjct: 1 MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS 60
Query: 61 QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR 120
QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR
Sbjct: 61 QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR 120
Query: 121 HRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTE 180
HRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTE
Sbjct: 121 HRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTE 180
Query: 181 NLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQ 240
NLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQ
Sbjct: 181 NLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQ 240
Query: 241 VPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGV 300
VPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGV
Sbjct: 241 VPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGV 300
Query: 301 LTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG 360
LTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG
Sbjct: 301 LTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG 360
Query: 361 GWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVMRR 420
GWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVMRR
Sbjct: 361 GWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVMRR 420
Query: 421 KGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES 465
KGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES
Sbjct: 421 KGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES 465
>gi|239743664 PREDICTED: hypothetical protein XP_002342939 isoform 1
[Homo sapiens]
Length = 482
Score = 923 bits (2385), Expect = 0.0
Identities = 465/468 (99%), Positives = 465/468 (99%), Gaps = 3/468 (0%)
Query: 1 MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS 60
MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS
Sbjct: 15 MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS 74
Query: 61 QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR 120
QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR
Sbjct: 75 QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR 134
Query: 121 HRIQSKHRPLDERALQ---EKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFN 177
HRIQSKHRPLDERALQ EKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFN
Sbjct: 135 HRIQSKHRPLDERALQPSQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFN 194
Query: 178 TTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPD 237
TTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPD
Sbjct: 195 TTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPD 254
Query: 238 LGQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQ 297
LGQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQ
Sbjct: 255 LGQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQ 314
Query: 298 DGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVD 357
DGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVD
Sbjct: 315 DGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVD 374
Query: 358 PSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLV 417
PSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLV
Sbjct: 375 PSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLV 434
Query: 418 MRRKGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES 465
MRRKGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES
Sbjct: 435 MRRKGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES 482
>gi|167466201 WAS protein family homolog 1 [Homo sapiens]
Length = 465
Score = 903 bits (2333), Expect = 0.0
Identities = 455/465 (97%), Positives = 459/465 (98%)
Query: 1 MTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRS 60
MTPVRMQHSLAGQTYAVP IQPDLRREEAVQQMADALQYLQKVSGDIFSRISQ+VEQSRS
Sbjct: 1 MTPVRMQHSLAGQTYAVPLIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQRVEQSRS 60
Query: 61 QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPR 120
QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAP RLQEYGSIFTGAQDPGLQRRPR
Sbjct: 61 QVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPERLQEYGSIFTGAQDPGLQRRPR 120
Query: 121 HRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTE 180
HRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTE
Sbjct: 121 HRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTE 180
Query: 181 NLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQ 240
NLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQ
Sbjct: 181 NLYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQ 240
Query: 241 VPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGV 300
VPEI VPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGV
Sbjct: 241 VPEIDVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGV 300
Query: 301 LTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG 360
LTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG
Sbjct: 301 LTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG 360
Query: 361 GWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVMRR 420
G ATLLESIRQAGGIGKAKLRS+KERKLEK++QKEQEQVRATSQGG LMSDLFNKLVMRR
Sbjct: 361 GRATLLESIRQAGGIGKAKLRSVKERKLEKKKQKEQEQVRATSQGGDLMSDLFNKLVMRR 420
Query: 421 KGISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQAEEDEDDWES 465
KGISGKGPGAGEGPGGAF RVSDSIPPLPPPQQPQAEEDEDDWES
Sbjct: 421 KGISGKGPGAGEGPGGAFARVSDSIPPLPPPQQPQAEEDEDDWES 465
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 60.5 bits (145), Expect = 3e-09
Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 272 PSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPV 331
PSAP LP H V D + PPPPPPPPPP PE +S PP PP
Sbjct: 567 PSAPPQAALLPGNH--VPNGCAADPKASRELPPPPPPPPPPLPEAASSPPPAPPLPLESA 624
Query: 332 GQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIR 370
G G Q SSSS + ++ P+G + LL I+
Sbjct: 625 GPGCGQRRSSSSTGST---KSFNMMSPTGDNSELLAEIK 660
Score = 37.7 bits (86), Expect = 0.022
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 299 GVLTPPPPPP----PPPPAPEVLASAPPLPPSTAAPVGQGA 335
G TPPPPPP PPPP L PP P+ PVG A
Sbjct: 426 GKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAPKPPVGPQA 466
Score = 34.7 bits (78), Expect = 0.19
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 293 KVDLQDGVLTPPPPPPP----PPPAPEVLASAPPLPPSTAAP 330
++ L G + P PPPP PPP P PP PP AP
Sbjct: 417 ELGLPRGTIGKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAP 458
Score = 32.3 bits (72), Expect = 0.94
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 303 PPPPPP---PPPPAPEVLASAPPLPPSTA 328
PPPPPP PPP P A PP+ P A
Sbjct: 439 PPPPPPGTQLPPPPPGYPAPKPPVGPQAA 467
Score = 29.3 bits (64), Expect = 7.9
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 301 LTPPPPPPPPPPA--PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDP 358
L+P P PP P + S P+PP+T AP G + D + + QG P
Sbjct: 699 LSPVRSPTPPAAGFQPLLNGSLVPVPPTTPAP---GVQLDVEALIPTHDEQGRP------ 749
Query: 359 SGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVM 418
+ ++ + K +L+ +E E+++++E+E+ R S L KL
Sbjct: 750 -------IPEWKRQVMVRKMQLKMQEEE--EQRRKEEEEEARLASMPAWRRDLLRKKLEE 800
Query: 419 RRK 421
R+
Sbjct: 801 ERE 803
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 55.8 bits (133), Expect = 8e-08
Identities = 54/188 (28%), Positives = 69/188 (36%), Gaps = 23/188 (12%)
Query: 236 PDLGQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVA------ 289
P G P VP+ P + DL +A+ PG AP P +P LP+
Sbjct: 511 PSGGDAPTPGVPTGSP-----SPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQA 565
Query: 290 -------EPLKVDLQDGVLTPPPPPPPPPPAPE--VLASAPPLPPSTAAPVGQGARQDDS 340
EP G L PPPPPPPPPP + V PP PP P R+D
Sbjct: 566 PPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSE 625
Query: 341 SSSASPSVQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVR 400
+ + + P W L S Q G +L K + E +EQ +
Sbjct: 626 LGPGVKAKKPIQTKFRMPLLNWVALKPS--QITGTVFTELNDEKVLQ-ELDMSDFEEQFK 682
Query: 401 ATSQGGHL 408
SQG L
Sbjct: 683 TKSQGPSL 690
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 54.3 bits (129), Expect = 2e-07
Identities = 58/201 (28%), Positives = 77/201 (38%), Gaps = 42/201 (20%)
Query: 271 APSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAP 330
AP P T LP P PPP PPPPPPAP SAPP P P
Sbjct: 279 APKVPPTPEPLPLSTPSAGTPQS--------QPPPLPPPPPPAP---GSAPPALPPEGPP 327
Query: 331 VGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIRQAGG----------IGKAKL 380
+ + QD + +S + G P+ AT + GG +G+A
Sbjct: 328 --EDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGDPSSAPGPALLGEAAA 385
Query: 381 RSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVMRRKGISG--KGP--GAGEGPGG 436
+R L + +EQ+ + + D+ +L++R KGP GAGEG
Sbjct: 386 PGNGQRSLVGSEGLSKEQLEHRERSLQTLRDI-ERLLLRSGETEPFLKGPPGGAGEGG-- 442
Query: 437 AFVRVSDSIPPL---PPPQQP 454
PP PPPQQP
Sbjct: 443 ---------PPAQAPPPPQQP 454
Score = 29.6 bits (65), Expect = 6.1
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 21/171 (12%)
Query: 305 PPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQD--DSSSSASPSVQGAPREVV----DP 358
PP P A PP P TA P G ++ S S + S+ G P E P
Sbjct: 434 PPGGAGEGGPPAQAPPPPQQPPTAPPSGLKKYEEPLQSMISQTQSLGGPPLEHEVPGHPP 493
Query: 359 SGGWATLLESIRQAGGIGKAKLRSMKERKLEKQ--QQKEQEQVRATSQGGHLMSDLFNKL 416
G + + Q G + RKL+++ ++K +++ + G + D+
Sbjct: 494 GGDMGQQMNMMIQRLGQDSLTPEQVAWRKLQEEYYEEKRRKEEQIGLHGSRPLQDMMGMG 553
Query: 417 VMRRKGIS---GKGPGAGEGPG-GAFVR----VSDSI-----PPLPPPQQP 454
M +G PG PG GA +R V D + PP P P+ P
Sbjct: 554 GMMVRGPPPPYHSKPGDQWPPGMGAQLRGPMDVQDPMQLRGGPPFPGPRFP 604
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 53.5 bits (127), Expect = 4e-07
Identities = 50/143 (34%), Positives = 59/143 (41%), Gaps = 20/143 (13%)
Query: 277 TIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGAR 336
T P LP H A V PPPPPPPP P P A+ PP PP A QG+
Sbjct: 162 TGPILPPGHPSSAASAPVSCSG----PPPPPPPPVPPPPTGATPPP-PPPLPAGGAQGSS 216
Query: 337 QDDSS-SSASPSVQGAPREVV----DPSGGWATLLESIRQA-----GGIGKAKLRSM--- 383
D+SS S + ++ GA V D SGG + S A GG G + M
Sbjct: 217 HDESSMSGLAAAIAGAKLRRVQRPEDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNKL 276
Query: 384 --KERKLEKQQQKEQEQVRATSQ 404
K RK Q K E+ SQ
Sbjct: 277 LAKRRKAASQSDKPAEKKEDESQ 299
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 51.2 bits (121), Expect = 2e-06
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 259 DLMYSADLGPGIAPSAPGT-------------IPELPTFHTEVAEPLKVDLQDGVLTPPP 305
DL +S LG + P+ PG +P +P F + + L+ PPP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT--QTAPPPPP 655
Query: 306 PPPPPPPAPEVLASAPPLPPSTAA--PVGQGARQDDSSSSASPSVQGAPREVVDPSGGWA 363
PPPPPPPAPE PP PS A P G G + S + VQG ++ G A
Sbjct: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGL-ESLSPEFFTSVVQGVLSSLLGSLGARA 714
Query: 364 TLLESI 369
ESI
Sbjct: 715 GSSESI 720
Score = 31.6 bits (70), Expect = 1.6
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 17/70 (24%)
Query: 272 PSAPGTIPELPTFHTEVAEPLKVDL-----------------QDGVLTPPPPPPPPPPAP 314
P P PE ++ +EP++ + Q+ LTP P P P PAP
Sbjct: 198 PQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAP 257
Query: 315 EVLASAPPLP 324
E A P P
Sbjct: 258 ETNAPNHPSP 267
Score = 31.6 bits (70), Expect = 1.6
Identities = 45/192 (23%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 291 PLKVDLQDGVLTPPPPPPPPPPA---PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPS 347
P +++ PPP P PPPA P V+ + + PV S +
Sbjct: 409 PSSTNVESSAEGAPPPGPAPPPATSHPRVIR----ISHQSVEPVVMMHMNIQDSGTQPGG 464
Query: 348 VQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQ---EQVRATSQ 404
V AP + P G TL + Q G A R + R Q + V T Q
Sbjct: 465 VPSAPTGPLGPPGHGQTLGQ---QVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQ 521
Query: 405 G---------GHLMSDLFNKLVMRRKGISGKGPGAGEGPGGAFVRVSDSIP--------- 446
G ++S L +L+M+ ++ PG P A S
Sbjct: 522 GAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPA 581
Query: 447 ---PLPPPQQPQ 455
P PP PQ
Sbjct: 582 PGGPAQPPPTPQ 593
Score = 29.6 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 310 PPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAP 352
PPP P A APP P A+ V + +SS+ +P AP
Sbjct: 388 PPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP 428
Score = 29.3 bits (64), Expect = 7.9
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 303 PPPPPPPPPPAPEVLAS---------APPLPPSTAAPVGQGARQDDSSSSASPSVQG 350
PPP PP P P L+S APP P A V + A + + P+ G
Sbjct: 196 PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAG 252
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 51.2 bits (121), Expect = 2e-06
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 259 DLMYSADLGPGIAPSAPGT-------------IPELPTFHTEVAEPLKVDLQDGVLTPPP 305
DL +S LG + P+ PG +P +P F + + L+ PPP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT--QTAPPPPP 655
Query: 306 PPPPPPPAPEVLASAPPLPPSTAA--PVGQGARQDDSSSSASPSVQGAPREVVDPSGGWA 363
PPPPPPPAPE PP PS A P G G + S + VQG ++ G A
Sbjct: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGL-ESLSPEFFTSVVQGVLSSLLGSLGARA 714
Query: 364 TLLESI 369
ESI
Sbjct: 715 GSSESI 720
Score = 31.6 bits (70), Expect = 1.6
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 17/70 (24%)
Query: 272 PSAPGTIPELPTFHTEVAEPLKVDL-----------------QDGVLTPPPPPPPPPPAP 314
P P PE ++ +EP++ + Q+ LTP P P P PAP
Sbjct: 198 PQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAP 257
Query: 315 EVLASAPPLP 324
E A P P
Sbjct: 258 ETNAPNHPSP 267
Score = 31.6 bits (70), Expect = 1.6
Identities = 45/192 (23%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 291 PLKVDLQDGVLTPPPPPPPPPPA---PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPS 347
P +++ PPP P PPPA P V+ + + PV S +
Sbjct: 409 PSSTNVESSAEGAPPPGPAPPPATSHPRVIR----ISHQSVEPVVMMHMNIQDSGTQPGG 464
Query: 348 VQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQ---EQVRATSQ 404
V AP + P G TL + Q G A R + R Q + V T Q
Sbjct: 465 VPSAPTGPLGPPGHGQTLGQ---QVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQ 521
Query: 405 G---------GHLMSDLFNKLVMRRKGISGKGPGAGEGPGGAFVRVSDSIP--------- 446
G ++S L +L+M+ ++ PG P A S
Sbjct: 522 GAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPA 581
Query: 447 ---PLPPPQQPQ 455
P PP PQ
Sbjct: 582 PGGPAQPPPTPQ 593
Score = 29.6 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 310 PPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAP 352
PPP P A APP P A+ V + +SS+ +P AP
Sbjct: 388 PPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP 428
Score = 29.3 bits (64), Expect = 7.9
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 303 PPPPPPPPPPAPEVLAS---------APPLPPSTAAPVGQGARQDDSSSSASPSVQG 350
PPP PP P P L+S APP P A V + A + + P+ G
Sbjct: 196 PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAG 252
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 51.2 bits (121), Expect = 2e-06
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 259 DLMYSADLGPGIAPSAPGT-------------IPELPTFHTEVAEPLKVDLQDGVLTPPP 305
DL +S LG + P+ PG +P +P F + + L+ PPP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT--QTAPPPPP 655
Query: 306 PPPPPPPAPEVLASAPPLPPSTAA--PVGQGARQDDSSSSASPSVQGAPREVVDPSGGWA 363
PPPPPPPAPE PP PS A P G G + S + VQG ++ G A
Sbjct: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGL-ESLSPEFFTSVVQGVLSSLLGSLGARA 714
Query: 364 TLLESI 369
ESI
Sbjct: 715 GSSESI 720
Score = 31.6 bits (70), Expect = 1.6
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 17/70 (24%)
Query: 272 PSAPGTIPELPTFHTEVAEPLKVDL-----------------QDGVLTPPPPPPPPPPAP 314
P P PE ++ +EP++ + Q+ LTP P P P PAP
Sbjct: 198 PQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAP 257
Query: 315 EVLASAPPLP 324
E A P P
Sbjct: 258 ETNAPNHPSP 267
Score = 31.6 bits (70), Expect = 1.6
Identities = 45/192 (23%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 291 PLKVDLQDGVLTPPPPPPPPPPA---PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPS 347
P +++ PPP P PPPA P V+ + + PV S +
Sbjct: 409 PSSTNVESSAEGAPPPGPAPPPATSHPRVIR----ISHQSVEPVVMMHMNIQDSGTQPGG 464
Query: 348 VQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQ---EQVRATSQ 404
V AP + P G TL + Q G A R + R Q + V T Q
Sbjct: 465 VPSAPTGPLGPPGHGQTLGQ---QVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQ 521
Query: 405 G---------GHLMSDLFNKLVMRRKGISGKGPGAGEGPGGAFVRVSDSIP--------- 446
G ++S L +L+M+ ++ PG P A S
Sbjct: 522 GAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPA 581
Query: 447 ---PLPPPQQPQ 455
P PP PQ
Sbjct: 582 PGGPAQPPPTPQ 593
Score = 29.6 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 310 PPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAP 352
PPP P A APP P A+ V + +SS+ +P AP
Sbjct: 388 PPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP 428
Score = 29.3 bits (64), Expect = 7.9
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 303 PPPPPPPPPPAPEVLAS---------APPLPPSTAAPVGQGARQDDSSSSASPSVQG 350
PPP PP P P L+S APP P A V + A + + P+ G
Sbjct: 196 PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAG 252
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 51.2 bits (121), Expect = 2e-06
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 259 DLMYSADLGPGIAPSAPGT-------------IPELPTFHTEVAEPLKVDLQDGVLTPPP 305
DL +S LG + P+ PG +P +P F + + L+ PPP
Sbjct: 604 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT--QTAPPPPP 661
Query: 306 PPPPPPPAPEVLASAPPLPPSTAA--PVGQGARQDDSSSSASPSVQGAPREVVDPSGGWA 363
PPPPPPPAPE PP PS A P G G + S + VQG ++ G A
Sbjct: 662 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGL-ESLSPEFFTSVVQGVLSSLLGSLGARA 720
Query: 364 TLLESI 369
ESI
Sbjct: 721 GSSESI 726
Score = 31.6 bits (70), Expect = 1.6
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 17/70 (24%)
Query: 272 PSAPGTIPELPTFHTEVAEPLKVDL-----------------QDGVLTPPPPPPPPPPAP 314
P P PE ++ +EP++ + Q+ LTP P P P PAP
Sbjct: 204 PQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAP 263
Query: 315 EVLASAPPLP 324
E A P P
Sbjct: 264 ETNAPNHPSP 273
Score = 31.6 bits (70), Expect = 1.6
Identities = 45/192 (23%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 291 PLKVDLQDGVLTPPPPPPPPPPA---PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPS 347
P +++ PPP P PPPA P V+ + + PV S +
Sbjct: 415 PSSTNVESSAEGAPPPGPAPPPATSHPRVIR----ISHQSVEPVVMMHMNIQDSGTQPGG 470
Query: 348 VQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQ---EQVRATSQ 404
V AP + P G TL + Q G A R + R Q + V T Q
Sbjct: 471 VPSAPTGPLGPPGHGQTLGQ---QVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQ 527
Query: 405 G---------GHLMSDLFNKLVMRRKGISGKGPGAGEGPGGAFVRVSDSIP--------- 446
G ++S L +L+M+ ++ PG P A S
Sbjct: 528 GAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPA 587
Query: 447 ---PLPPPQQPQ 455
P PP PQ
Sbjct: 588 PGGPAQPPPTPQ 599
Score = 29.6 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 310 PPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAP 352
PPP P A APP P A+ V + +SS+ +P AP
Sbjct: 394 PPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP 434
Score = 29.3 bits (64), Expect = 7.9
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 303 PPPPPPPPPPAPEVLAS---------APPLPPSTAAPVGQGARQDDSSSSASPSVQG 350
PPP PP P P L+S APP P A V + A + + P+ G
Sbjct: 202 PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAG 258
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 49.7 bits (117), Expect = 6e-06
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 246 VPSYLPDLPGIANDLMYSADLGPGIAPSAPGTI-PELPTFHTEVAEPLKVDLQDGVLTPP 304
VP LP LP S P IAP+ P T P +P EP ++ G L PP
Sbjct: 791 VPEGLPPLPPPPP----SGATPPPIAPTGPPTASPPVPAKE----EPEELPAAPGPLPPP 842
Query: 305 PPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDD 339
PPPPPP P P L +P T G A ++D
Sbjct: 843 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEED 877
Score = 43.9 bits (102), Expect = 3e-04
Identities = 55/190 (28%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 244 IHVPSYLPDLPGIANDLMYSADLGPGIAPSA--PGTIPELPTFHTEVAEP---------- 291
+ VP L LPG N S + P +APS P TIP TF V P
Sbjct: 717 VSVPPRL--LPGPENHRAGSNE-DPILAPSGTPPPTIPPDETFGGRVPRPAFVHYDKEEA 773
Query: 292 ------LKVDLQDGVLTPPPPPPPPPPAPEVLASAPPL----PPSTAAPVGQGARQDDSS 341
L+ D D V+ P PP PP P A+ PP+ PP+ + PV A+++
Sbjct: 774 SDVEISLESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPV--PAKEEPEE 831
Query: 342 SSASPSVQGAPREVVDPSGGWATL----LESIRQAGGIGKAKL---------RSMKERKL 388
A+P P P G TL L GG G L S E +
Sbjct: 832 LPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEE 891
Query: 389 EKQQQKEQEQ 398
E+++++E+E+
Sbjct: 892 EEEEEEEEEE 901
Score = 32.3 bits (72), Expect = 0.94
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 7/60 (11%)
Query: 299 GVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDP 358
G P P P PPP AP + P PP VG S SA P P P
Sbjct: 642 GPTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVG-------SMPSAGPMPSAGPMPSAGP 694
Score = 29.6 bits (65), Expect = 6.1
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 295 DLQDGVLTPPPPPP--PPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSV 348
++++G PP PP PPP +P + P P V + +++ + +P++
Sbjct: 971 EVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTL 1026
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 49.3 bits (116), Expect = 7e-06
Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 293 KVDLQDGVLTPP---PPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQ 349
+V G PP PPPPP PP P P LPPS GA + P+ Q
Sbjct: 155 RVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQ 214
Query: 350 GAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLM 409
G P GG A + A I AKLR + +++ + S GG LM
Sbjct: 215 G-------PGGGGA---GAPGLAAAIAGAKLRKVSKQEEASGGPTAPKAESGRSGGGGLM 264
Query: 410 SDLFNKLVMRRK 421
++ L RRK
Sbjct: 265 EEMNAMLARRRK 276
Score = 30.0 bits (66), Expect = 4.7
Identities = 25/93 (26%), Positives = 32/93 (34%)
Query: 305 PPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWAT 364
PPP PP PA + P AA + + S + AP+ SGG
Sbjct: 204 PPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSKQEEASGGPTAPKAESGRSGGGGL 263
Query: 365 LLESIRQAGGIGKAKLRSMKERKLEKQQQKEQE 397
+ E KA K K E Q+E E
Sbjct: 264 MEEMNAMLARRRKATQVGEKTPKDESANQEEPE 296
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 49.3 bits (116), Expect = 7e-06
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 251 PDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEV---------AEPLKVDLQDGVL 301
P LPG+ + P + P T P PT + A P L
Sbjct: 1434 PPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTP 1493
Query: 302 TPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSV 348
+ PPPPP PPP P + S PP PP AAP+ + + S P +
Sbjct: 1494 SSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPEL 1540
Score = 47.8 bits (112), Expect = 2e-05
Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 251 PDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPP 310
PDLP + L P + AP P + EP +DG PPPPPPPP
Sbjct: 788 PDLPLVLPPP--PPQLLPSVLSHAPSPSPSASKVGVHLLEPAT---RDGAPQPPPPPPPP 842
Query: 311 PPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESI 369
P PP+P A + + A+PS + P E +DP G LL ++
Sbjct: 843 P---------PPMPLQLEAHL-----RSHGLEPAAPSPRLRPEESLDPPGAMQELLGAL 887
Score = 45.8 bits (107), Expect = 8e-05
Identities = 35/88 (39%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 236 PDLGQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGT------IPELPTFHTEVA 289
P G P P+Y P P Y G P PG PELP+ T A
Sbjct: 974 PKAGAGPPPGPPAYDPYGP-------YCPGRASGAGPETPGLGLDPNKPPELPS--TVNA 1024
Query: 290 EPLKVDLQDG---VLTPPPPPPPPPPAP 314
EPL + +Q G PPPPPPPPPPAP
Sbjct: 1025 EPLGL-IQSGPHQAAPPPPPPPPPPPAP 1051
Score = 29.6 bits (65), Expect = 6.1
Identities = 35/115 (30%), Positives = 43/115 (37%), Gaps = 19/115 (16%)
Query: 269 GIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPS-- 326
G AP P LP T + Q PPPPPPP A + S PS
Sbjct: 270 GAAPGPPPPERALPRQDTVIKH-----YQRPASAQPPPPPPPAHALQHYLSCGGSYPSMG 324
Query: 327 -----TAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIRQAGGIG 376
+P+G G + S + PS G P + G AT E+ AGG G
Sbjct: 325 HRANLACSPLGGG---EPSPGAGEPSKAG-PSGATAGASGRATGPEA---AGGGG 372
Score = 29.3 bits (64), Expect = 7.9
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Query: 299 GVLTPPPPPPPPPPAPE-----VLASAPPLPPSTAAP 330
G PPP P PPP PE P P TA P
Sbjct: 1688 GSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMP 1724
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 48.9 bits (115), Expect = 1e-05
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 239 GQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQD 298
GQ+P + +P+ P P ++ A P + P+ P P PL
Sbjct: 758 GQLPPLLIPTD-PSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQ 816
Query: 299 GVL-----TPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPR 353
L T P P P PP ++++A P PP+ ++ + SSS+S S
Sbjct: 817 SPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS------ 870
Query: 354 EVVDPSGGWATLLESIRQAGGIGKAKLR--SMKERKLEKQQQKEQEQVRATSQGGHLMSD 411
PS + + S+ +G +A L S K+ +LE + K +E+ ++ ++ ++ +
Sbjct: 871 ---SPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQE 927
Query: 412 LFNK 415
FNK
Sbjct: 928 TFNK 931
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 48.9 bits (115), Expect = 1e-05
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 239 GQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQD 298
GQ+P + +P+ P P ++ A P + P+ P P PL
Sbjct: 959 GQLPPLLIPTD-PSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQ 1017
Query: 299 GVL-----TPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPR 353
L T P P P PP ++++A P PP+ ++ + SSS+S S
Sbjct: 1018 SPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS------ 1071
Query: 354 EVVDPSGGWATLLESIRQAGGIGKAKLR--SMKERKLEKQQQKEQEQVRATSQGGHLMSD 411
PS + + S+ +G +A L S K+ +LE + K +E+ ++ ++ ++ +
Sbjct: 1072 ---SPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQE 1128
Query: 412 LFNK 415
FNK
Sbjct: 1129 TFNK 1132
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 48.9 bits (115), Expect = 1e-05
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 239 GQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQD 298
GQ+P + +P+ P P ++ A P + P+ P P PL
Sbjct: 959 GQLPPLLIPTD-PSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQ 1017
Query: 299 GVL-----TPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPR 353
L T P P P PP ++++A P PP+ ++ + SSS+S S
Sbjct: 1018 SPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS------ 1071
Query: 354 EVVDPSGGWATLLESIRQAGGIGKAKLR--SMKERKLEKQQQKEQEQVRATSQGGHLMSD 411
PS + + S+ +G +A L S K+ +LE + K +E+ ++ ++ ++ +
Sbjct: 1072 ---SPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQE 1128
Query: 412 LFNK 415
FNK
Sbjct: 1129 TFNK 1132
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 48.5 bits (114), Expect = 1e-05
Identities = 43/168 (25%), Positives = 63/168 (37%), Gaps = 20/168 (11%)
Query: 198 KTHVMLGAETEEKLFDAPL-SISKREQLEQQVPENYFYVPDLGQVPEIHVPSYLPDLPGI 256
KT + +T+ + F P S SK + Q VP+ ++ + ++ P+ D+
Sbjct: 575 KTFRNVCVQTDRETFLKPCESESKTTRSNQLVPKKL----NISSLSQLSPPNDHKDIHAA 630
Query: 257 ANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAE----PLKVDLQDGVLTPPPPPPPPPP 312
+ A P P +IP P + + P + G PPPPPPPPP
Sbjct: 631 LQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPL 690
Query: 313 APEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSG 360
P A PP PP P +S +P G P P G
Sbjct: 691 PPPSSAGPPPPPPPPPLP-----------NSPAPPNPGGPPPAPPPPG 727
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 48.5 bits (114), Expect = 1e-05
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 267 GPGIAPS-APGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPP----PPPPPA-PEVLASA 320
GP P+ G P P+ A P + V PPPPP PPPPPA P S
Sbjct: 298 GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSG 357
Query: 321 PPLPPSTAAPVGQGARQDDSSSSASPSVQGAP-------REVVDPSGGWATLLESIRQAG 373
PP PP + VG A P P +V +G A LL+ IR+
Sbjct: 358 PPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAALLDQIREGA 417
Query: 374 GIGKAKLRS 382
+ K + S
Sbjct: 418 QLKKVEQNS 426
Score = 39.7 bits (91), Expect = 0.006
Identities = 21/35 (60%), Positives = 21/35 (60%), Gaps = 7/35 (20%)
Query: 303 PPPPPPP----PPPAPEVLASAPPLPPS---TAAP 330
PPPPPPP PPP P APP PPS TAAP
Sbjct: 288 PPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
Score = 37.0 bits (84), Expect = 0.038
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 8/37 (21%)
Query: 303 PPPPPP----PPPPAPEVLASAPPLPPSTAAPVGQGA 335
PPPPPP PPPP P S PP PP+ G+GA
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPAR----GRGA 309
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 48.5 bits (114), Expect = 1e-05
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 256 IANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPE 315
+ ++++ +GP + ++ G +P P ++ + +Q+G +TPP PPPPPPP P
Sbjct: 504 MGSEVVAGNSVGPTMGAASSGPLPPPPPPLPPSSDTPET-VQNGPVTPPMPPPPPPPPPP 562
Query: 316 VLASAPPLPPSTAAPVGQ 333
PP PP P +
Sbjct: 563 PPPPPPPPPPPLPGPAAE 580
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 23/99 (23%)
Query: 236 PDLGQVPEIHVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVD 295
P +G +P P LP ++D + GP P P P P
Sbjct: 516 PTMGAASSGPLPPPPPPLPP-SSDTPETVQNGPVTPPMPPPPPPPPPP------------ 562
Query: 296 LQDGVLTPPPPPPPPPPAPEVLAS---APPL-PPSTAAP 330
PPPPPPPPPP P A APPL PP +AP
Sbjct: 563 ------PPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAP 595
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 303 PPPPPPPPP-----PAPEV---LASAPPLPPSTAAPV 331
PPPPP P P PAP + L SAPPLP +++ V
Sbjct: 569 PPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTSSPTV 605
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 48.1 bits (113), Expect = 2e-05
Identities = 45/156 (28%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 303 PPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGW 362
PPPPPPP PP P L APP PP +A PV D+SS +G + D G
Sbjct: 4 PPPPPPPLPPPPPPL-GAPPPPPPSAPPV-----STDTSSLRRADPKGRSALLADIQQG- 56
Query: 363 ATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMSDLFNKL-VMRRK 421
T L + Q ++ S K E G L + F L ++
Sbjct: 57 -TRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQR 115
Query: 422 GISGKGPGAGEGPGGAFVRVSDSI--PPLPPPQQPQ 455
++G G G G R+ + PL PP P+
Sbjct: 116 DVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPR 151
Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 236 PDLGQVPEIHVPSYLPDLPGIANDLMYSADLG-PGIAPSAPGTIPELPTFHTEVAEPLKV 294
P VP P+ P P + L S+ + P ++P P T LP VA P+
Sbjct: 166 PPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPV----VAPPVPC 221
Query: 295 DLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 327
PPPPPPPPPP P PPLPP++
Sbjct: 222 -------APPPPPPPPPPTP------PPLPPAS 241
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/131 (30%), Positives = 49/131 (37%), Gaps = 21/131 (16%)
Query: 235 VPDLGQVPEIHVPSYLPDLP--GIANDLMYSADLGPGIAPSAPGTIPELPT-----FHTE 287
VP P P P LP + +D L P P P +P LP E
Sbjct: 219 VPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAE 278
Query: 288 VAEPLKVDLQDGVLTPPPPPPPPPP----APEVLASAPPLPPSTAAPVGQGARQDDSSSS 343
A P + D Q+ PP PPPP PP +P APPLP V +
Sbjct: 279 PASPAQ-DAQE----PPAPPPPLPPYASCSPRASLPAPPLP-----GVNSSSETPPPLPP 328
Query: 344 ASPSVQGAPRE 354
SPS Q P++
Sbjct: 329 KSPSFQAPPQK 339
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 239 GQVPEIHVPSYLPDLPG--IANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDL 296
GQ P PS P LP I+ L+ A G A G P A P
Sbjct: 123 GQGPGSRAPS--PRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPP----- 175
Query: 297 QDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVG 332
PP PPPPPPP P L S+ P+ +P G
Sbjct: 176 ------PPTPPPPPPPLPPPLPSSSPIKTPLVSPPG 205
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 30/107 (28%)
Query: 236 PDLGQVPEIH-VPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKV 294
P LG E H P P + A P P P P LP+ + P+K
Sbjct: 150 PRLGNTSEAHGAARTAPPRPNVP------APPPPTPPPPPPPLPPPLPS-----SSPIKT 198
Query: 295 DLQDG----------VLTPPPPPPPPPPAPEVLASAPPLPPSTAAPV 331
L V+ PP P PPPP PP PP T P+
Sbjct: 199 PLVSPPGPLTKGNLPVVAPPVPCAPPPP--------PPPPPPTPPPL 237
Score = 30.0 bits (66), Expect = 4.7
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 252 DLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPP- 310
+LP +A + + P P P +P + +P L + PP P PP
Sbjct: 211 NLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPC 270
Query: 311 --------PPAPEVLASAPPLPPSTAAP 330
P +P A PP PP P
Sbjct: 271 GYPGLKAEPASPAQDAQEPPAPPPPLPP 298
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 302 TPPPPPPPPPPAPEVLASAPPLPPST-AAPVGQGARQDDSSSSASPSV 348
TP PPPPPPPP P L +APP P ST A P + + A PSV
Sbjct: 2036 TPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAPAQPSV 2083
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 285 HTEVAEPLKVDLQDGVLTPPPPPPPPPPA--------PEVLASAPPLPPSTAAP 330
H + PL+ + PPPPPPPP PA P + ASAPP+ T AP
Sbjct: 2025 HYDKLYPLRPQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAP 2078
Score = 30.4 bits (67), Expect = 3.6
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 236 PDLGQVPEIHVPSYLPDLP--GIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLK 293
P+L +P VPS P LP G+ N ++ P A + P+ P + + +
Sbjct: 3149 PNLMGLPSTTVPS--PGLPTSGLPNKPSSASLSSPTPAQATMAMGPQQPPQQQQQQQQPQ 3206
Query: 294 VDLQDGVLTPPPPPPPPPPAPEV 316
V PPPP PPP P++
Sbjct: 3207 VQQP-----PPPPAAQPPPTPQL 3224
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 47.8 bits (112), Expect = 2e-05
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 268 PGIAPS-APGTIPELPT-FHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPP 325
P ++P +P + P+LP T + PL V TPPPPPPPPPP P PP PP
Sbjct: 389 PYVSPRHSPWSSPKLPKKVQTVRSRPLSP-----VATPPPPPPPPPPPPPSSQRLPPPPP 443
Query: 326 STAAP----------VGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIRQAGGI 375
P + + +Q +S+ A + Q + + L E
Sbjct: 444 PPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEI------- 496
Query: 376 GKAKLRSMKERKLEKQQQKEQEQ 398
K LRS++E+K+E + Q
Sbjct: 497 -KNSLRSVQEKKMEDSSRPSTPQ 518
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.4 bits (111), Expect = 3e-05
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 13/111 (11%)
Query: 264 ADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPL 323
A L P P+APGT+ + P F A P P P PP PAP A+APP
Sbjct: 223 AALLPLPKPAAPGTVIQTPPFVGAAAPP----------APAAPSPPAAPAPAAPAAAPPP 272
Query: 324 PPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIRQAGG 374
PP A + + +A+P+V P +GG A + A G
Sbjct: 273 PPPAPATLARPPGHPAGPPTAAPAV---PPPAAAQNGGSAGAAPAPAPAAG 320
Score = 38.1 bits (87), Expect = 0.017
Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 43/124 (34%)
Query: 267 GPGIAP-----------------------------------SAPGTIPELPTFHTEVAEP 291
GPG A +APGT+ + P F A P
Sbjct: 191 GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP 250
Query: 292 LKV----DLQDGVLTPPPPPPPPPPAPEVLASAP--PLPPSTAAPV--GQGARQDDSSSS 343
P PPPPPPAP LA P P P TAAP A Q+ S+
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAG 310
Query: 344 ASPS 347
A+P+
Sbjct: 311 AAPA 314
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 47.4 bits (111), Expect = 3e-05
Identities = 67/274 (24%), Positives = 102/274 (37%), Gaps = 50/274 (18%)
Query: 72 AQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPRHRIQSKHRPLD 131
A K G + SS + GRL + TG++ G + +PL
Sbjct: 375 AVTKASSFSGISVLTRGDSSGSSKSIGRLSK-----TGSESSGSVGSSTGSLSHIQQPLP 429
Query: 132 ERALQEKLKDFPVC---VSTKPEPEDDAEEGLGGLPSNISSVSS--LLLFNTTENLYKKY 186
AL + PV VST D GGL ++S S+ LL +
Sbjct: 430 GTALSQSSHGAPVVYPTVSTHSSLSFD-----GGLNGQVASPSTSFFLLPLEAAGIPPGS 484
Query: 187 VFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQVPEIHV 246
+ ++P G + + +++ P++ ++ + QVP P+ +
Sbjct: 485 ILINPQTG-----QPFINPDGSPVVYNPPMT---QQPVRSQVPGP----------PQPPL 526
Query: 247 PSYLPDLPGIANDLMYSADLGPGIA-------PSAPGTIPELPTFHTEVAEPLKVDLQDG 299
P+ P AN + +LG + PSA G+ P F + V L+ Q G
Sbjct: 527 PA--PPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVV--LQSPQQSG 582
Query: 300 VL---TPPPPPPPPPPAPEVLASAPPLPPSTAAP 330
+ PPP PPPPPP P PPLPP P
Sbjct: 583 YIMTAAPPPHPPPPPPPP---PPPPPLPPGQPVP 613
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 47.0 bits (110), Expect = 4e-05
Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 24/188 (12%)
Query: 287 EVAEPLKVDLQDGVLT-----PPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQ-DDS 340
E + LK LQ V+ P P P P PP LP G Q D
Sbjct: 246 ERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLPSGAGYQSGTHQGQFDHG 305
Query: 341 SSSASPSVQGAPREVVDPSGG---WATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQE 397
S S SPS + +P PS G ++ E +GG K R ++E+K E + KEQ+
Sbjct: 306 SGSLSPS-KKSPVGKSPPSTGSTYGSSQKEESAASGGAAYTK-RYLEEQKTENGKDKEQK 363
Query: 398 QVRATSQGGHLMSDLFNKLVMRRKG-ISGKGPGAGEGPGGAFVRVSDSIPPLPPPQQPQA 456
Q +K ++ KG S G G G+ +F +DS P Q P+
Sbjct: 364 QTNT------------DKEKIKEKGSFSDTGLGDGKMKSDSFAPKTDSEKPFRGSQSPKR 411
Query: 457 EEDEDDWE 464
+ DD+E
Sbjct: 412 YKLRDDFE 419
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 46.6 bits (109), Expect = 5e-05
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 268 PGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVL-ASAPPLPPS 326
P + P AP P LP T PL V PP P PPPPPA E S PP+ P+
Sbjct: 404 PPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPA 463
Query: 327 TAA------PVGQGARQDDSSSSASPSVQGAP 352
T + P+ R + ++ A P P
Sbjct: 464 TCSRKRGRPPLTPSQRAEREAARAGPEGTSPP 495
Score = 45.1 bits (105), Expect = 1e-04
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 272 PSAPGTI-PELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAP 330
P P TI P PT T PL L + P PPPPPPP VL+S P PP A
Sbjct: 2218 PPLPPTISPTAPTSWTLPPGPLLGVLPVVGVVRPAPPPPPPPLTLVLSSGPASPPRQAIR 2277
Query: 331 VGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRS 382
V + + S A P + APR D T +GG + ++++
Sbjct: 2278 VKRVSTFSGRSPPAPPPYK-APRLDEDGEASEDTPQVPGLGSGGFSRVRMKT 2328
Score = 40.8 bits (94), Expect = 0.003
Identities = 52/202 (25%), Positives = 75/202 (37%), Gaps = 35/202 (17%)
Query: 268 PGIAPSAPGTIPELPTFHTEVA-EP-LKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPP 325
P AP+ P T LP + EP + L PPPP PPPPPAP S PP P
Sbjct: 583 PPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAP----SPPPAP- 637
Query: 326 STAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWATLLESIRQAGGIGKAKLRSMKE 385
++SS P + AP+ PS + ES+ +G + + +
Sbjct: 638 --------------ATSSRRPLLLRAPQ--FTPSEAHLKIYESVLTPPPLGAPE--APEP 679
Query: 386 RKLEKQQQKEQEQVRATSQGGHLMSDLFNKLVMR--RKGISGKG-PGAGEGPGGAFVRV- 441
+ + RA + HL F +V + +S G P GP +
Sbjct: 680 EPPPADDSPAEPEPRAVGRTNHLSLPRFAPVVTTPVKAEVSPHGAPALSNGPQTQAQLLQ 739
Query: 442 ------SDSIPPLPPPQQPQAE 457
+ +P PP QPQ +
Sbjct: 740 PLQALQTQLLPQALPPPQPQLQ 761
Score = 38.5 bits (88), Expect = 0.013
Identities = 23/68 (33%), Positives = 27/68 (39%)
Query: 289 AEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSV 348
AE + L LTPP P PPPP P + PPL P PV A
Sbjct: 394 AEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQ 453
Query: 349 QGAPREVV 356
+ +P VV
Sbjct: 454 EESPPPVV 461
Score = 33.5 bits (75), Expect = 0.42
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 281 LPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPV 331
+P E A+ L +PPPP PPP +P PP PP + P+
Sbjct: 391 MPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPL 441
Score = 32.7 bits (73), Expect = 0.72
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 290 EPLKVDLQDGVLTPP---PPPPPPPPAPEVLASAPPLPPSTAAPVGQGAR 336
+P KV++ VL PP PP P PAP P PPST P+ + R
Sbjct: 553 KPPKVEVSP-VLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRR 601
Score = 32.0 bits (71), Expect = 1.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 270 IAPSAPGTIPELPTFHTEVAEPLKV---DLQDGVLTPPPPPPPPPPAPEVLASAPPLPPS 326
++P + P ++ +PL+ L L PP P PPP+P+ + PPL +
Sbjct: 719 VSPHGAPALSNGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQM---PPLEKA 775
Query: 327 TAAPVG 332
A VG
Sbjct: 776 RIAGVG 781
Score = 31.6 bits (70), Expect = 1.6
Identities = 57/236 (24%), Positives = 80/236 (33%), Gaps = 37/236 (15%)
Query: 248 SYLPDLPGIANDLMYSADLGPGIAPSAPGT-----IPELPTFHTEVAEPLKVDLQDGVLT 302
++LP PG+ LGP P P T + +L ++A G
Sbjct: 2164 AWLPGAPGVR-----VLSLGPAPEPPKPATSKIILVNKLGQVFVKMA---------GEGE 2209
Query: 303 PPPPPPPPPPAPEVLASAPPLPPSTAAPVGQ--GARQDDSSSSASPSVQGAPREVVDPSG 360
P PPP PP P + +P P S P G G +P P +V SG
Sbjct: 2210 PVPPPVKQPPLPPTI--SPTAPTSWTLPPGPLLGVLPVVGVVRPAPPPPPPPLTLVLSSG 2267
Query: 361 GWATLLESIR-----QAGGIGKAKLRSMKERKLEKQQQKEQE--QVRATSQGGHLMSDLF 413
+ ++IR G K +L++ + ++ QV GG +
Sbjct: 2268 PASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGEASEDTPQVPGLGSGGFSRVRMK 2327
Query: 414 NKLVMRRKGISGKGPGAGEGPGGAFVRVSDSIPPLP---PPQQPQAEED---EDDW 463
V + G AGE G S + PLP PPQ P D E W
Sbjct: 2328 TPTVRGVLDLDRPGEPAGEESPGPLQERSPLL-PLPEDGPPQVPDGPPDLLLESQW 2382
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 46.2 bits (108), Expect = 6e-05
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 270 IAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTA- 328
++P+ P P LP+ + L+ + TPPPP PPPPP P AP +PP A
Sbjct: 320 VSPTPPPPPPPLPSALS--TSSLRASMTS---TPPPPVPPPPPPPATALQAPAVPPPPAP 374
Query: 329 APVGQGARQDDSSSSASPSVQGAP 352
+ G A P VQ +P
Sbjct: 375 LQIAPGVLHPAPPPIAPPLVQPSP 398
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 29/179 (16%)
Query: 247 PSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPP 306
P+ L PG+ + + P + +P P T PL G+ PPPP
Sbjct: 372 PAPLQIAPGVLHPA--PPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 307 PPPPPPA---------------PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGA 351
PP PPP P L P P P+ + ++ P +
Sbjct: 430 PPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPS 489
Query: 352 PREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMS 410
V+ S + LLE+IR + ++ RK+E+Q+++E + R + ++S
Sbjct: 490 TLPVI--SDARSVLLEAIR----------KGIQLRKVEEQREQEAKHERIENDVATILS 536
Score = 35.8 bits (81), Expect = 0.085
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 11/42 (26%)
Query: 300 VLTPPPPPPPPPPAPEVLASA-----------PPLPPSTAAP 330
V P PPPPPPP P L+++ PP+PP P
Sbjct: 318 VFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 46.2 bits (108), Expect = 6e-05
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 270 IAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTA- 328
++P+ P P LP+ + L+ + TPPPP PPPPP P AP +PP A
Sbjct: 320 VSPTPPPPPPPLPSALS--TSSLRASMTS---TPPPPVPPPPPPPATALQAPAVPPPPAP 374
Query: 329 APVGQGARQDDSSSSASPSVQGAP 352
+ G A P VQ +P
Sbjct: 375 LQIAPGVLHPAPPPIAPPLVQPSP 398
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 29/179 (16%)
Query: 247 PSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPP 306
P+ L PG+ + + P + +P P T PL G+ PPPP
Sbjct: 372 PAPLQIAPGVLHPA--PPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 307 PPPPPPA---------------PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGA 351
PP PPP P L P P P+ + ++ P +
Sbjct: 430 PPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPS 489
Query: 352 PREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMS 410
V+ S + LLE+IR + ++ RK+E+Q+++E + R + ++S
Sbjct: 490 TLPVI--SDARSVLLEAIR----------KGIQLRKVEEQREQEAKHERIENDVATILS 536
Score = 35.8 bits (81), Expect = 0.085
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 11/42 (26%)
Query: 300 VLTPPPPPPPPPPAPEVLASA-----------PPLPPSTAAP 330
V P PPPPPPP P L+++ PP+PP P
Sbjct: 318 VFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 46.2 bits (108), Expect = 6e-05
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 270 IAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTA- 328
++P+ P P LP+ + L+ + TPPPP PPPPP P AP +PP A
Sbjct: 320 VSPTPPPPPPPLPSALS--TSSLRASMTS---TPPPPVPPPPPPPATALQAPAVPPPPAP 374
Query: 329 APVGQGARQDDSSSSASPSVQGAP 352
+ G A P VQ +P
Sbjct: 375 LQIAPGVLHPAPPPIAPPLVQPSP 398
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 29/179 (16%)
Query: 247 PSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDLQDGVLTPPPP 306
P+ L PG+ + + P + +P P T PL G+ PPPP
Sbjct: 372 PAPLQIAPGVLHPA--PPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPP 429
Query: 307 PPPPPPA---------------PEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGA 351
PP PPP P L P P P+ + ++ P +
Sbjct: 430 PPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPS 489
Query: 352 PREVVDPSGGWATLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLMS 410
V+ S + LLE+IR + ++ RK+E+Q+++E + R + ++S
Sbjct: 490 TLPVI--SDARSVLLEAIR----------KGIQLRKVEEQREQEAKHERIENDVATILS 536
Score = 35.8 bits (81), Expect = 0.085
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 11/42 (26%)
Query: 300 VLTPPPPPPPPPPAPEVLASA-----------PPLPPSTAAP 330
V P PPPPPPP P L+++ PP+PP P
Sbjct: 318 VFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPP 359
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,010,497
Number of Sequences: 37866
Number of extensions: 1491058
Number of successful extensions: 35310
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 853
Number of HSP's that attempted gapping in prelim test: 14266
Number of HSP's gapped (non-prelim): 10496
length of query: 465
length of database: 18,247,518
effective HSP length: 106
effective length of query: 359
effective length of database: 14,233,722
effective search space: 5109906198
effective search space used: 5109906198
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.