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Search of human proteins with 239743509
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo ... 438 e-123
gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo ... 438 e-123
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|91208420 bassoon protein [Homo sapiens] 45 5e-05
gi|60460889 Myb protein P42POP [Homo sapiens] 44 8e-05
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 44 1e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 44 1e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 44 1e-04
gi|5031805 insulin receptor substrate 1 [Homo sapiens] 42 4e-04
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 42 4e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 42 5e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 41 7e-04
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 41 9e-04
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 40 0.001
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 40 0.001
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 40 0.001
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ... 40 0.001
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 40 0.001
gi|112421108 capicua homolog [Homo sapiens] 40 0.001
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 40 0.002
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 39 0.002
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 39 0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens] 39 0.002
gi|122937321 UNC homeobox [Homo sapiens] 39 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.003
gi|54873613 agrin [Homo sapiens] 39 0.004
gi|116284392 mucin 2 precursor [Homo sapiens] 39 0.004
>gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo
sapiens]
Length = 212
Score = 438 bits (1126), Expect = e-123
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MTWVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDP 60
MTWVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDP
Sbjct: 1 MTWVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDP 60
Query: 61 RKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKAT 120
RKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKAT
Sbjct: 61 RKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKAT 120
Query: 121 QLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRR 180
QLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRR
Sbjct: 121 QLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRR 180
Query: 181 GRGFSVPRKGWRRERERAFQATCRRRSGTRSS 212
GRGFSVPRKGWRRERERAFQATCRRRSGTRSS
Sbjct: 181 GRGFSVPRKGWRRERERAFQATCRRRSGTRSS 212
>gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
sapiens]
Length = 212
Score = 438 bits (1126), Expect = e-123
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MTWVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDP 60
MTWVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDP
Sbjct: 1 MTWVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDP 60
Query: 61 RKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKAT 120
RKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKAT
Sbjct: 61 RKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKAT 120
Query: 121 QLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRR 180
QLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRR
Sbjct: 121 QLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRR 180
Query: 181 GRGFSVPRKGWRRERERAFQATCRRRSGTRSS 212
GRGFSVPRKGWRRERERAFQATCRRRSGTRSS
Sbjct: 181 GRGFSVPRKGWRRERERAFQATCRRRSGTRSS 212
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 45.1 bits (105), Expect = 5e-05
Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 27/146 (18%)
Query: 50 THTPVHETTDPR------KEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGA 103
T TP PR + A VPA A P+PP+A PARP+LR
Sbjct: 29 TRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALR---------- 78
Query: 104 CCATAQLTAAARRTKAT---QLRPGIALAANATPRTPAEAKKSRLGRGQATPP----PPR 156
+ A RR +AT +++P + + P + R G+G P PP
Sbjct: 79 ----GETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPA 134
Query: 157 DPRPGTAPFQAVGGTLGGGGTGRRGR 182
P A+ GG GRR R
Sbjct: 135 PPGGRRTWLSALATGPAAGGAGRRRR 160
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 45.1 bits (105), Expect = 5e-05
Identities = 58/209 (27%), Positives = 81/209 (38%), Gaps = 20/209 (9%)
Query: 5 QKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEA 64
Q+ + GP GP G + SV GPA A P G SP T +PR A
Sbjct: 263 QERSRGPGGPQPGSRQAETARATSVP-GPAQAAAPPEVGRVSPQPPQPTKPSTAEPRPPA 321
Query: 65 AQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKA-TQLR 123
+ PA++AT P A + L GA T T + + +A TQ +
Sbjct: 322 GE-----APAKSATAVPAGLGATEQTQEGLTGKLFGLGASLLTQASTLMSVQPEADTQGQ 376
Query: 124 PGIALAANATPR-----TPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTG 178
P + TP+ EA LG G P P P T P +G G G
Sbjct: 377 PA---PSKGTPKIVFNDASKEAGPKPLGSG---PGPGPAPGAKTEPGARMGPGSGPGALP 430
Query: 179 RRGRGFSVPRKGWRRERERAFQATCRRRS 207
+ G G + P+ G R E + A +A + ++
Sbjct: 431 KTG-GTTSPKHG-RAEHQAASKAAAKPKT 457
Score = 35.0 bits (79), Expect = 0.047
Identities = 42/153 (27%), Positives = 55/153 (35%), Gaps = 18/153 (11%)
Query: 19 SHRPSLGPLSVSHGPAVAPNL--PRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARA 76
S P L P S S P +P PR T +P + PR A +V
Sbjct: 1475 SSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAPTPSPMVAQGT 1534
Query: 77 ATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRT 136
TP PS P RL + A L + A ++Q R A A+ + +
Sbjct: 1535 QTPHRPSTP-------RLVWQESSQEAPFMVITLASDA----SSQTRMVHASASTSPLCS 1583
Query: 137 PAEAKKSRLGRGQATPP-----PPRDPRPGTAP 164
P E + + G Q TPP PP P P P
Sbjct: 1584 PTETQPTTHGYSQTTPPSVSQLPPEPPGPPGFP 1616
Score = 28.9 bits (63), Expect = 3.4
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 18/100 (18%)
Query: 14 PALGCSHRPS-------LGP--LSVSHGPAVAPNLPRTGFASPLCTHTPVH----ETTDP 60
P +G HR S GP L GP A P + ASPL + ++P
Sbjct: 539 PPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPLPSKASPQAKPLRASEP 598
Query: 61 RK--EAAQHEVFLVPARAAT---PAPPSAPAPARPSLRLG 95
K + Q + VP +A P P + P PA P ++ G
Sbjct: 599 SKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKSG 638
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 44.3 bits (103), Expect = 8e-05
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 73 PARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANA 132
P P+PPS P P RP L +S + A Q TA A R A LR G+A + A
Sbjct: 232 PLAQVAPSPPSPPPPPRPPPTLSASDPSLDFLRA-QQETANAIRELAGTLRQGLAKLSEA 290
Query: 133 -------TPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
P TP ++ L PPPPR P AP
Sbjct: 291 LSALLPLLPGTPVDSLPPPLPPPPPPPPPPRPVLPPPAP 329
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 1e-04
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 22/143 (15%)
Query: 26 PLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPAR--AATPAPPS 83
P + + P + P T A P TP T P +A E P A TPAPPS
Sbjct: 172 PSATTPAPPSSSAPPETTAAPP----TPSATTQAPPSSSAPPETTAAPPTPPATTPAPPS 227
Query: 84 APAPARPSLRLGSSSLTGGA---CCATAQLTAAARRTKATQLRPGIALA---ANATPRTP 137
+ AP + + S T A A + TA AT L P A A A P TP
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTP 287
Query: 138 AEAKKSRLGRGQATPPPPRDPRP 160
+ TP PP P P
Sbjct: 288 SAT----------TPAPPSSPAP 300
Score = 35.0 bits (79), Expect = 0.047
Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 33 PAVAPNLPRTGFASPLCTH---TPVHETTDPRKEAAQHEVFLVPAR--AATPAPPSAPAP 87
P+ P + A P T TP T DP +A E P A TPAPPS+PAP
Sbjct: 241 PSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Query: 88 ----ARPSLRLGSSSLT------GGACCATAQLTAAARRTKATQLRPGIALAANATPR 135
A P SS T + T Q T + T +P A N R
Sbjct: 301 QETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNKISR 358
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 76 AATPAPPSAPAPARPSLRLGSSSLTGGA---CCATAQLTAAARRTKAT------QLRPGI 126
A TPAPPS+ AP + + S T A A + TAA AT P
Sbjct: 174 ATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPE 233
Query: 127 ALAANATP--RTPAEAKKSRLGRGQATPPPPR----DPRPGTAP 164
AA TP TPA S A PP P DP +AP
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Score = 30.4 bits (67), Expect = 1.2
Identities = 26/105 (24%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 36 APNLPRTGFASPLCTHTPVHETTDPRKEAAQ----HEVFLVPARAATPAPPSAPAPARPS 91
AP P +PL + P T P +A P A P PSA PA PS
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPS 296
Query: 92 LRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRT 136
+ + T A T T P + T +T
Sbjct: 297 SPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQT 341
Score = 28.1 bits (61), Expect = 5.7
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 8/86 (9%)
Query: 77 ATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATP-- 134
A P PSA PA P SS A +A + + P AA TP
Sbjct: 167 AAPPTPSATTPAPP------SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPA 220
Query: 135 RTPAEAKKSRLGRGQATPPPPRDPRP 160
TPA S A PP P P
Sbjct: 221 TTPAPPSSSAPPETTAAPPTPSATTP 246
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 1e-04
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 22/143 (15%)
Query: 26 PLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPAR--AATPAPPS 83
P + + P + P T A P TP T P +A E P A TPAPPS
Sbjct: 172 PSATTPAPPSSSAPPETTAAPP----TPSATTQAPPSSSAPPETTAAPPTPPATTPAPPS 227
Query: 84 APAPARPSLRLGSSSLTGGA---CCATAQLTAAARRTKATQLRPGIALA---ANATPRTP 137
+ AP + + S T A A + TA AT L P A A A P TP
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTP 287
Query: 138 AEAKKSRLGRGQATPPPPRDPRP 160
+ TP PP P P
Sbjct: 288 SAT----------TPAPPSSPAP 300
Score = 35.0 bits (79), Expect = 0.047
Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 33 PAVAPNLPRTGFASPLCTH---TPVHETTDPRKEAAQHEVFLVPAR--AATPAPPSAPAP 87
P+ P + A P T TP T DP +A E P A TPAPPS+PAP
Sbjct: 241 PSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Query: 88 ----ARPSLRLGSSSLT------GGACCATAQLTAAARRTKATQLRPGIALAANATPR 135
A P SS T + T Q T + T +P A N R
Sbjct: 301 QETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNKISR 358
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 76 AATPAPPSAPAPARPSLRLGSSSLTGGA---CCATAQLTAAARRTKAT------QLRPGI 126
A TPAPPS+ AP + + S T A A + TAA AT P
Sbjct: 174 ATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPE 233
Query: 127 ALAANATP--RTPAEAKKSRLGRGQATPPPPR----DPRPGTAP 164
AA TP TPA S A PP P DP +AP
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Score = 30.4 bits (67), Expect = 1.2
Identities = 26/105 (24%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 36 APNLPRTGFASPLCTHTPVHETTDPRKEAAQ----HEVFLVPARAATPAPPSAPAPARPS 91
AP P +PL + P T P +A P A P PSA PA PS
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPS 296
Query: 92 LRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRT 136
+ + T A T T P + T +T
Sbjct: 297 SPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQT 341
Score = 28.1 bits (61), Expect = 5.7
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 8/86 (9%)
Query: 77 ATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATP-- 134
A P PSA PA P SS A +A + + P AA TP
Sbjct: 167 AAPPTPSATTPAPP------SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPA 220
Query: 135 RTPAEAKKSRLGRGQATPPPPRDPRP 160
TPA S A PP P P
Sbjct: 221 TTPAPPSSSAPPETTAAPPTPSATTP 246
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 1e-04
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 22/143 (15%)
Query: 26 PLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPAR--AATPAPPS 83
P + + P + P T A P TP T P +A E P A TPAPPS
Sbjct: 172 PSATTPAPPSSSAPPETTAAPP----TPSATTQAPPSSSAPPETTAAPPTPPATTPAPPS 227
Query: 84 APAPARPSLRLGSSSLTGGA---CCATAQLTAAARRTKATQLRPGIALA---ANATPRTP 137
+ AP + + S T A A + TA AT L P A A A P TP
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTP 287
Query: 138 AEAKKSRLGRGQATPPPPRDPRP 160
+ TP PP P P
Sbjct: 288 SAT----------TPAPPSSPAP 300
Score = 35.0 bits (79), Expect = 0.047
Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 33 PAVAPNLPRTGFASPLCTH---TPVHETTDPRKEAAQHEVFLVPAR--AATPAPPSAPAP 87
P+ P + A P T TP T DP +A E P A TPAPPS+PAP
Sbjct: 241 PSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Query: 88 ----ARPSLRLGSSSLT------GGACCATAQLTAAARRTKATQLRPGIALAANATPR 135
A P SS T + T Q T + T +P A N R
Sbjct: 301 QETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNKISR 358
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 76 AATPAPPSAPAPARPSLRLGSSSLTGGA---CCATAQLTAAARRTKAT------QLRPGI 126
A TPAPPS+ AP + + S T A A + TAA AT P
Sbjct: 174 ATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPE 233
Query: 127 ALAANATP--RTPAEAKKSRLGRGQATPPPPR----DPRPGTAP 164
AA TP TPA S A PP P DP +AP
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Score = 30.4 bits (67), Expect = 1.2
Identities = 26/105 (24%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 36 APNLPRTGFASPLCTHTPVHETTDPRKEAAQ----HEVFLVPARAATPAPPSAPAPARPS 91
AP P +PL + P T P +A P A P PSA PA PS
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPS 296
Query: 92 LRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRT 136
+ + T A T T P + T +T
Sbjct: 297 SPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQT 341
Score = 28.1 bits (61), Expect = 5.7
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 8/86 (9%)
Query: 77 ATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATP-- 134
A P PSA PA P SS A +A + + P AA TP
Sbjct: 167 AAPPTPSATTPAPP------SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPA 220
Query: 135 RTPAEAKKSRLGRGQATPPPPRDPRP 160
TPA S A PP P P
Sbjct: 221 TTPAPPSSSAPPETTAAPPTPSATTP 246
>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
Length = 1242
Score = 42.0 bits (97), Expect = 4e-04
Identities = 52/200 (26%), Positives = 71/200 (35%), Gaps = 20/200 (10%)
Query: 25 GPLSVSHGPAV--------APNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARA 76
GP++ P+V AP TG T + P + AA E V
Sbjct: 911 GPVAFHSSPSVRCPSQLQPAPREEETG------TEEYMKMDLGPGRRAAWQESTGVEMGR 964
Query: 77 ATPAPPSAPAPARPSLRLGSSS---LTGGACCATAQL--TAAARRTKATQLRPGIALAAN 131
PAPP A + RP+ + SS +T C T+ A +R GIA
Sbjct: 965 LGPAPPGAASICRPTRAVPSSRGDYMTMQMSCPRQSYVDTSPAAPVSYADMRTGIAAEEV 1024
Query: 132 ATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGW 191
+ PR A S A+P P+ A +GG G GG R P +
Sbjct: 1025 SLPRATMAAASSS-SAASASPTGPQGAAELAAHSSLLGGPQGPGGMSAFTRVNLSPNRNQ 1083
Query: 192 RRERERAFQATCRRRSGTRS 211
+ RA CRRR + +
Sbjct: 1084 SAKVIRADPQGCRRRHSSET 1103
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 42.0 bits (97), Expect = 4e-04
Identities = 53/185 (28%), Positives = 61/185 (32%), Gaps = 41/185 (22%)
Query: 31 HGPAVAPNLPRTGF-ASPLCTHTP----VHETTDPRKEAAQHEV--FLVPARAATPAPPS 83
HG AP+ P G A P+ P T+ P A E VP A T AP
Sbjct: 15 HGAPAAPSPPPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPGSAETSAPAP 74
Query: 84 APAPA----------------------RPSLRLGSSSLTGGACCA---TAQLTAAARRTK 118
APAPA +P L G S A + L A A K
Sbjct: 75 APAPAPAPAVTGSTVVVLTLEASPEAPKPQLPSGPESPEPAAVAGVETSRALAAGADSPK 134
Query: 119 ATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTG 178
+ RP A TP SR G T PP P+PGT T+ G T
Sbjct: 135 TEEARPSPAPGPGTPTGTPTRTP-SRTAPGALTAKPPLAPKPGT--------TVASGVTA 185
Query: 179 RRGRG 183
R G
Sbjct: 186 RSASG 190
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 41.6 bits (96), Expect = 5e-04
Identities = 51/194 (26%), Positives = 74/194 (38%), Gaps = 38/194 (19%)
Query: 19 SHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAAT 78
SHR S G SH P+++ + + S L +P H + RK +Q + + +
Sbjct: 252 SHRHSSGS---SHSPSLSSHYSDSRSPSRL---SPKHRD-EGRKTGSQRS-----SGSRS 299
Query: 79 PAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPA 138
P+P GS GG+ +R+ A RPG A + P +P+
Sbjct: 300 PSPSGGSG-------WGSPQRNGGS----------GQRSGAHGGRPGSAHSPPDKPSSPS 342
Query: 139 EAKKSRLGRGQATPPP--PRDPRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGWRRERE 196
+ + TPP P P +AP G GG GRR R+ RR R
Sbjct: 343 PRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR-------RRRRRRRRR 395
Query: 197 RAFQATCRRRSGTR 210
A+ RR G R
Sbjct: 396 SRSSASAPRRRGRR 409
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 41.2 bits (95), Expect = 7e-04
Identities = 45/153 (29%), Positives = 58/153 (37%), Gaps = 15/153 (9%)
Query: 22 PSLGPLSVSHGPAVAPNLPR--TGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATP 79
P+ GP VS P+ P+ TG + PL + V T + V P TP
Sbjct: 1265 PTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQ-VPPTMVNNTGVVKIVVRQAPRDGLTP 1323
Query: 80 APPSAPAPARPSLRLGS-----SSLTGGACCATAQLTAAARRTKATQLRPGIALAANATP 134
PP APAP PS L + +LT G TA A T +RP + L + +P
Sbjct: 1324 VPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSP 1383
Query: 135 RTPAEAK-------KSRLGRGQATPPPPRDPRP 160
A A S L + P P P P
Sbjct: 1384 EVSASAPGAAPLTISSPLHVPSSLPGPASSPMP 1416
Score = 35.0 bits (79), Expect = 0.047
Identities = 52/184 (28%), Positives = 67/184 (36%), Gaps = 35/184 (19%)
Query: 11 PLGPALGCSHRP-SLGPLSVSH-------GPAVAPNLPRTG------FASPLCTHTPVHE 56
PL P + + P SL P S G A AP+L + +P +H P
Sbjct: 1479 PLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLN 1538
Query: 57 TTDPRKEAAQHEVFLVPARAATPAPPSAPAP--ARPSLRLGSSSLTGGACCATAQLTAAA 114
+T A LVPA A PSAP P A+ SL +SS + A + A
Sbjct: 1539 ST----VAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQ 1594
Query: 115 RRTKATQLRPGIA--------------LAANATPRTPAEAKKSRLGRGQATPPPPRDPRP 160
A P +A LA++ TP P A S G A+ P P P
Sbjct: 1595 TAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTP-VPVMAPSSTPGTSLASASPVPAPTP 1653
Query: 161 GTAP 164
AP
Sbjct: 1654 VLAP 1657
Score = 34.7 bits (78), Expect = 0.061
Identities = 41/151 (27%), Positives = 52/151 (34%), Gaps = 8/151 (5%)
Query: 7 ATGGPLGPA--LGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEA 64
A G PLGP L + P L P S GPA A L +S P T A
Sbjct: 1735 APGPPLGPTQTLSLAPAPPLAPASPV-GPAPAHTLTLAPASSSASLLAPASVQTLTLSPA 1793
Query: 65 AQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRP 124
+ A+ AP S +PA + SSL A A R ++ P
Sbjct: 1794 PVPTLGPAAAQTLALAPASTQSPASQA-----SSLVVSASGAAPLPVTMVSRLPVSKDEP 1848
Query: 125 GIALAANATPRTPAEAKKSRLGRGQATPPPP 155
+ P P+ A R + PPPP
Sbjct: 1849 DTLTLRSGPPSPPSTATSFGGPRPRRQPPPP 1879
Score = 33.1 bits (74), Expect = 0.18
Identities = 41/157 (26%), Positives = 57/157 (36%), Gaps = 19/157 (12%)
Query: 12 LGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQ----- 66
L PAL P+LG S S ++ P+ F + + TP +
Sbjct: 1683 LAPALA----PTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGP 1738
Query: 67 -----HEVFLVPARAATPAPPSAPAPARPSLRL----GSSSLTGGACCATAQLTAAARRT 117
+ L PA PA P PAPA +L L S+SL A T L+ A T
Sbjct: 1739 PLGPTQTLSLAPAPPLAPASPVGPAPAH-TLTLAPASSSASLLAPASVQTLTLSPAPVPT 1797
Query: 118 KATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPP 154
+ALA +T ++A + A P P
Sbjct: 1798 LGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLP 1834
Score = 28.5 bits (62), Expect = 4.4
Identities = 33/140 (23%), Positives = 40/140 (28%), Gaps = 20/140 (14%)
Query: 34 AVAPNLPRTGFASPL---------CTHTPVHETTDPRKEAAQHEVFLVPARAATPAPPSA 84
A AP P T + L HTPV R PAR P P
Sbjct: 2385 AKAPERPGTRVSERLRGARAETQGANHTPVISAHQTRSTTTPPRCS--PARERVPRPAPR 2442
Query: 85 PAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSR 144
P P S +L A ++A P L + P P ++
Sbjct: 2443 PRPTPASAPAAIPALVPVPVSAPVPISAP---------NPITILPVHILPSPPPPSQIPP 2493
Query: 145 LGRGQATPPPPRDPRPGTAP 164
TPPP P P P
Sbjct: 2494 CSSPACTPPPACTPPPAHTP 2513
Score = 28.1 bits (61), Expect = 5.7
Identities = 42/150 (28%), Positives = 55/150 (36%), Gaps = 12/150 (8%)
Query: 14 PALGCSHRPSLGPLSVSHG-PAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLV 72
PA + P+L P+ VS P APN P T + P P A
Sbjct: 2447 PASAPAAIPALVPVPVSAPVPISAPN-PITILPVHILPSPPPPSQIPPCSSPA-----CT 2500
Query: 73 PARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAAN- 131
P A TP P P PA+ L SS L G + +A+ LRP L A
Sbjct: 2501 PPPACTPPPAHTPPPAQTCLVTPSSPLLLG---PPSVPISASVTNLPLGLRPEAELCAQA 2557
Query: 132 -ATPRTPAEAKKSRLGRGQATPPPPRDPRP 160
A+P + A + + PP+D P
Sbjct: 2558 LASPESLELASVASSETSSLSLVPPKDLLP 2587
Score = 27.7 bits (60), Expect = 7.5
Identities = 42/162 (25%), Positives = 58/162 (35%), Gaps = 10/162 (6%)
Query: 11 PLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVF 70
PL P + P P+ S V P + + L + +PV T ++ +
Sbjct: 1605 PLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTML 1664
Query: 71 LVPARAATPAPPS----APAPA-RPSLRLGSSSLTGGACCATAQ---LTAAARRTKATQL 122
P + P+P S A APA P+L S S T Q T T A+ L
Sbjct: 1665 PAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSL 1724
Query: 123 RPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
P A + P P ++ L A P P P G AP
Sbjct: 1725 VPTPAQTLSLAPGPPLGPTQT-LSLAPAPPLAPASP-VGPAP 1764
>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
Length = 609
Score = 40.8 bits (94), Expect = 9e-04
Identities = 35/119 (29%), Positives = 43/119 (36%), Gaps = 10/119 (8%)
Query: 65 AQHEVFLVPARAATPAPPSAPA------PARPSLRLGSSSLTGGACCATAQLTAAARRTK 118
AQ VFL P P P+ P P P + + S + A C+ AQL +
Sbjct: 475 AQVAVFLPPPHMQPPFVPAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQL----QPQP 530
Query: 119 ATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGT 177
AT L A A P P + R P P P P PF+A L G T
Sbjct: 531 ATLLGKAGAFPPPAIPSAPGSQARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKAT 589
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 40.4 bits (93), Expect = 0.001
Identities = 46/159 (28%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Query: 51 HTPVHETTDPRKEAAQHEVFLVPARAATPA-PPSAPAPAR--PSLRLGSSSLTG---GAC 104
H P R+ A V P + +P P SAP PA P LR G L G
Sbjct: 150 HPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRRGKQDLLSADSGLP 209
Query: 105 CATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
A R A LRPG A+ + + R P +R RDP PG +
Sbjct: 210 AVDQGEVAGPRLQPAQPLRPG-AVPSASRARAPDTKAGTRA----------RDPAPGASQ 258
Query: 165 FQAVGGTLGGGGTGRRGRGFSVPRKGWRRERERAFQATC 203
+A GGG R + + PR +E A A+C
Sbjct: 259 LRAAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASC 297
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 40.4 bits (93), Expect = 0.001
Identities = 46/159 (28%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Query: 51 HTPVHETTDPRKEAAQHEVFLVPARAATPA-PPSAPAPAR--PSLRLGSSSLTG---GAC 104
H P R+ A V P + +P P SAP PA P LR G L G
Sbjct: 150 HPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRRGKQDLLSADSGLP 209
Query: 105 CATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
A R A LRPG A+ + + R P +R RDP PG +
Sbjct: 210 AVDQGEVAGPRLQPAQPLRPG-AVPSASRARAPDTKAGTRA----------RDPAPGASQ 258
Query: 165 FQAVGGTLGGGGTGRRGRGFSVPRKGWRRERERAFQATC 203
+A GGG R + + PR +E A A+C
Sbjct: 259 LRAAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASC 297
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 40.4 bits (93), Expect = 0.001
Identities = 46/159 (28%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Query: 51 HTPVHETTDPRKEAAQHEVFLVPARAATPA-PPSAPAPAR--PSLRLGSSSLTG---GAC 104
H P R+ A V P + +P P SAP PA P LR G L G
Sbjct: 149 HPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRRGKQDLLSADSGLP 208
Query: 105 CATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
A R A LRPG A+ + + R P +R RDP PG +
Sbjct: 209 AVDQGEVAGPRLQPAQPLRPG-AVPSASRARAPDTKAGTRA----------RDPAPGASQ 257
Query: 165 FQAVGGTLGGGGTGRRGRGFSVPRKGWRRERERAFQATC 203
+A GGG R + + PR +E A A+C
Sbjct: 258 LRAAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASC 296
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 40.0 bits (92), Expect = 0.001
Identities = 64/213 (30%), Positives = 76/213 (35%), Gaps = 44/213 (20%)
Query: 3 WVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRK 62
WV A PA + S G L V P AP LPR L T P R
Sbjct: 276 WVCPAAAPARSPA---RQQGSPGVLRVP--PEAAPPLPRP--RPHLLTRCPPRAPRLRRL 328
Query: 63 EAAQHEVFLVPARAATPAPPSAPA-------PARPSLRLGS--------------SSLTG 101
EA + R A P P A A P RPSL LGS +++ G
Sbjct: 329 EAGRRL-----RRTAAPLGPVAGAGSSFGGRPHRPSLALGSDRRSPEAPHYLLWAAAVRG 383
Query: 102 GACCATAQLTAAARRTKATQL--RPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPR 159
+ L ARR + R G + A+ + S +G A PPPP
Sbjct: 384 QEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTAAAGAERTSPVG---ARPPPPARLV 440
Query: 160 PGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGWR 192
TAP TLGG G GRG + P G R
Sbjct: 441 TNTAP------TLGGAGPRLEGRGGAAPPAGKR 467
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 40.0 bits (92), Expect = 0.001
Identities = 64/213 (30%), Positives = 76/213 (35%), Gaps = 44/213 (20%)
Query: 3 WVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRK 62
WV A PA + S G L V P AP LPR L T P R
Sbjct: 366 WVCPAAAPARSPA---RQQGSPGVLRVP--PEAAPPLPRP--RPHLLTRCPPRAPRLRRL 418
Query: 63 EAAQHEVFLVPARAATPAPPSAPA-------PARPSLRLGS--------------SSLTG 101
EA + R A P P A A P RPSL LGS +++ G
Sbjct: 419 EAGRRL-----RRTAAPLGPVAGAGSSFGGRPHRPSLALGSDRRSPEAPHYLLWAAAVRG 473
Query: 102 GACCATAQLTAAARRTKATQL--RPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPR 159
+ L ARR + R G + A+ + S +G A PPPP
Sbjct: 474 QEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTAAAGAERTSPVG---ARPPPPARLV 530
Query: 160 PGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGWR 192
TAP TLGG G GRG + P G R
Sbjct: 531 TNTAP------TLGGAGPRLEGRGGAAPPAGKR 557
>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
sapiens]
Length = 591
Score = 40.0 bits (92), Expect = 0.001
Identities = 64/213 (30%), Positives = 76/213 (35%), Gaps = 44/213 (20%)
Query: 3 WVQKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRK 62
WV A PA + S G L V P AP LPR L T P R
Sbjct: 366 WVCPAAAPARSPA---RQQGSPGVLRVP--PEAAPPLPRP--RPHLLTRCPPRAPRLRRL 418
Query: 63 EAAQHEVFLVPARAATPAPPSAPA-------PARPSLRLGS--------------SSLTG 101
EA + R A P P A A P RPSL LGS +++ G
Sbjct: 419 EAGRRL-----RRTAAPLGPVAGAGSSFGGRPHRPSLALGSDRRSPEAPHYLLWAAAVRG 473
Query: 102 GACCATAQLTAAARRTKATQL--RPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPR 159
+ L ARR + R G + A+ + S +G A PPPP
Sbjct: 474 QEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTAAAGAERTSPVG---ARPPPPARLV 530
Query: 160 PGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGWR 192
TAP TLGG G GRG + P G R
Sbjct: 531 TNTAP------TLGGAGPRLEGRGGAAPPAGKR 557
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 40.0 bits (92), Expect = 0.001
Identities = 46/165 (27%), Positives = 60/165 (36%), Gaps = 32/165 (19%)
Query: 6 KATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTP---------VHE 56
K+T G A CS P + P +H R P TP +H
Sbjct: 241 KSTAALSGEAASCS--PIIMPYKAAHS--------RNSMDRPKLFVTPPEGSSRRRIIHG 290
Query: 57 TTDPRKEAAQHEVFLVPA---RAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAA 113
T +KE + V + + RA +P+ P A PAR L L S SL L
Sbjct: 291 TASYKKERERENVLFLTSGTRRAVSPSNPKARQPARSRLWLPSKSL--------PHLPGT 342
Query: 114 ARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDP 158
R T + L PG AA A R P+ + R P +DP
Sbjct: 343 PRPT--SSLPPGSVKAAPAQVRPPSPGNIRPVKREVKVEPEKKDP 385
Score = 32.0 bits (71), Expect = 0.40
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 33 PAVAPNLPRTGFASPLCT--HTPVHETTDPRKEAAQHEVFLVPARAATPAPPSAPAPA 88
P N P +PL V E T E + PA A+ PAP SAPAPA
Sbjct: 389 PQKVANEPSLKGRAPLVKVEEATVEERTPAEPEVGPAAPAMAPAPASAPAPASAPAPA 446
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 40.0 bits (92), Expect = 0.001
Identities = 49/175 (28%), Positives = 64/175 (36%), Gaps = 24/175 (13%)
Query: 10 GPLGPA-----LGCSHRPSLGPLSVSHGPAVAPNLPRTGFA--SPLCTH----TPVHETT 58
GP GPA L P L P V P +P LP A P+ T +P ++
Sbjct: 1046 GPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSS 1105
Query: 59 DPRKEAAQHEVFLV---------PARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQ 109
P + +Q LV PA P P APA A P+ S T G+ T
Sbjct: 1106 APLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGS--MTYS 1163
Query: 110 LTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
L A + + + + A + P EA S GR P P +P P P
Sbjct: 1164 LVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGAS--GRPGPAPRQPLEPGPVREP 1216
Score = 27.7 bits (60), Expect = 7.5
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 24/119 (20%)
Query: 53 PVHETTDPRKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTA 112
PV E T P E + + PAPP P P+ R S L A + +A
Sbjct: 1212 PVREPTAPESE--------LEGQPTPPAPPPLPETWTPTAR-SSPPLPPPA---EERTSA 1259
Query: 113 AARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGT 171
T A++ ++++ R P + ++R PP P P AP A GG+
Sbjct: 1260 KGPETMASKFP-----SSSSDWRVPGQGLENR-------GEPPTPPSPAPAPAVAPGGS 1306
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 39.7 bits (91), Expect = 0.002
Identities = 40/159 (25%), Positives = 56/159 (35%), Gaps = 22/159 (13%)
Query: 10 GPLGPA----LGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAA 65
GPL P+ L + L PL S P+ N+ TP P +A
Sbjct: 890 GPLPPSADDNLKTPSKRQLTPLPPSAPPSADDNIK-----------TPAERLRGPLPPSA 938
Query: 66 QHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPG 125
+ R TP PPSAP A +++ + L G + + T L P
Sbjct: 939 DDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPS 998
Query: 126 IALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
+A+ +TPAE + L PP D T P
Sbjct: 999 APTSADDNIKTPAERLRGPL-------PPSADDNLKTPP 1030
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/164 (25%), Positives = 56/164 (34%), Gaps = 26/164 (15%)
Query: 10 GPLGPA----LGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAA 65
GPL P+ L L PL S P+ N+ TP P +A
Sbjct: 379 GPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIK-----------TPAEHLRGPLPPSA 427
Query: 66 QHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPG 125
+ R TP PPSAP A +++ + L G + + T L P
Sbjct: 428 DDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPS 487
Query: 126 IALAANATPRTPAEAKKSRL-----------GRGQATPPPPRDP 158
+A+ +TPAE + L Q TP PP P
Sbjct: 488 APPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAP 531
Score = 35.8 bits (81), Expect = 0.028
Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 15/134 (11%)
Query: 10 GPLGPA----LGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAA 65
GPL P+ L L PL S P+ N+ TP P +A
Sbjct: 463 GPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIK-----------TPAEHLRGPLPPSA 511
Query: 66 QHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPG 125
+ R TP PPSAP A +++ + L G + + T L P
Sbjct: 512 DDNLKTPSERQLTPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTPSERQLTPLPPS 571
Query: 126 IALAANATPRTPAE 139
+A+ +TPAE
Sbjct: 572 APPSADDNIKTPAE 585
Score = 33.9 bits (76), Expect = 0.10
Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 11/118 (9%)
Query: 52 TPVHETTDPRKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLT 111
T P +A + R TP PPSAP A +++ + L G +
Sbjct: 372 TTAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNL 431
Query: 112 AAARRTKATQLRPGIALAANATPRTPAEAKKSRL-----------GRGQATPPPPRDP 158
+ T L P +A+ +TPAE + L Q TP PP P
Sbjct: 432 KTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 489
Score = 32.7 bits (73), Expect = 0.23
Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 22/156 (14%)
Query: 10 GPLGPA----LGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAA 65
GPL P+ L L PL S P+ N+ TP P +A
Sbjct: 932 GPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIK-----------TPAERLRGPLPPSA 980
Query: 66 QHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGG-ACCATAQLTAAARRTKATQL-- 122
+ R TP PPSAP A +++ + L G A L T+ +
Sbjct: 981 DDNLKTPSERQLTPLPPSAPTSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEK 1040
Query: 123 --RPGIALAANATPRTPAEAKKSRLGRGQATPPPPR 156
+P AA P P E K+ R+G + + P R
Sbjct: 1041 PRKPKRQRAAEMEP--PPEPKRRRVGDVEPSRKPKR 1074
Score = 30.0 bits (66), Expect = 1.5
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 21/125 (16%)
Query: 52 TPVHETTDPRKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLT 111
TP P +A + P TP PPSAP A PS +L A C L
Sbjct: 284 TPPECLLTPLPPSADDNLKTPPECLLTPLPPSAPPSAPPS---ADDNLKTRAECLLHPLP 340
Query: 112 AAA-------RRTKATQLRPGIALAANATPRTPAEAKKSRL-----------GRGQATPP 153
+A + T L P +A+ +T AE + L Q TP
Sbjct: 341 PSADDNLKTPSERQLTPLPPSAPPSADDNIKTTAERLRGPLPPSADDNLKTPSERQLTPL 400
Query: 154 PPRDP 158
PP P
Sbjct: 401 PPSAP 405
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 39.3 bits (90), Expect = 0.002
Identities = 50/167 (29%), Positives = 70/167 (41%), Gaps = 27/167 (16%)
Query: 22 PSLGP-LSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPA 80
PSLG L VS G ++ PL PV E ++ +++H L A+A P
Sbjct: 30 PSLGRNLHVSPGTVLSD-------LQPLGITFPVFENSE---RSSRH---LPQAKAINPH 76
Query: 81 PPSAPAPA-----RPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRP-GIALAANATP 134
++ +PA RP R SS++ G+ T + + AR KA RP G+A +
Sbjct: 77 HTASLSPAGRGAQRPPERFLPSSVSAGSAARTLRRGSEAR--KAQTPRPAGVAQGSGGGG 134
Query: 135 RTPAEAKKSRLGRGQATPPPPRD-----PRPGTAPFQAVGGTLGGGG 176
+ GRG +T PPP P P P GG GGG
Sbjct: 135 ERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGG 181
Score = 30.4 bits (67), Expect = 1.2
Identities = 55/190 (28%), Positives = 62/190 (32%), Gaps = 58/190 (30%)
Query: 59 DPRKEAAQHEVFLVPAR----AATPAPPSAPAPA-RPSLRLGSSSLTGGACCATAQLTAA 113
DP +EAAQ + L R PA PSAP+P R L G S + A AA
Sbjct: 209 DPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAA 268
Query: 114 AR---RTKATQLRPGIALAAN---------------ATPRTPAEAKKSRLG--------- 146
AR R K G A A PR AE +S G
Sbjct: 269 ARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRSWPSFSA 328
Query: 147 --------------RGQATPP-PPRDPRP-----------GTAPFQAVGGTLGGGGTGRR 180
RG+A P PPR R G P G GGG G
Sbjct: 329 VSGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPGDRRGDGRFGGGRGAE 388
Query: 181 GRGFSVPRKG 190
G G +PR G
Sbjct: 389 GAGSGLPRGG 398
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 39.3 bits (90), Expect = 0.002
Identities = 50/167 (29%), Positives = 70/167 (41%), Gaps = 27/167 (16%)
Query: 22 PSLGP-LSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPA 80
PSLG L VS G ++ PL PV E ++ +++H L A+A P
Sbjct: 30 PSLGRNLHVSPGTVLSD-------LQPLGITFPVFENSE---RSSRH---LPQAKAINPH 76
Query: 81 PPSAPAPA-----RPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRP-GIALAANATP 134
++ +PA RP R SS++ G+ T + + AR KA RP G+A +
Sbjct: 77 HTASLSPAGRGAQRPPERFLPSSVSAGSAARTLRRGSEAR--KAQTPRPAGVAQGSGGGG 134
Query: 135 RTPAEAKKSRLGRGQATPPPPRD-----PRPGTAPFQAVGGTLGGGG 176
+ GRG +T PPP P P P GG GGG
Sbjct: 135 ERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGG 181
Score = 30.4 bits (67), Expect = 1.2
Identities = 55/190 (28%), Positives = 62/190 (32%), Gaps = 58/190 (30%)
Query: 59 DPRKEAAQHEVFLVPAR----AATPAPPSAPAPA-RPSLRLGSSSLTGGACCATAQLTAA 113
DP +EAAQ + L R PA PSAP+P R L G S + A AA
Sbjct: 209 DPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAA 268
Query: 114 AR---RTKATQLRPGIALAAN---------------ATPRTPAEAKKSRLG--------- 146
AR R K G A A PR AE +S G
Sbjct: 269 ARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRSWPSFSA 328
Query: 147 --------------RGQATPP-PPRDPRP-----------GTAPFQAVGGTLGGGGTGRR 180
RG+A P PPR R G P G GGG G
Sbjct: 329 VSGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPGDRRGDGRFGGGRGAE 388
Query: 181 GRGFSVPRKG 190
G G +PR G
Sbjct: 389 GAGSGLPRGG 398
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.3 bits (90), Expect = 0.002
Identities = 55/199 (27%), Positives = 65/199 (32%), Gaps = 38/199 (19%)
Query: 9 GGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHE 68
G P GP + S L+ H A A +L G A+ L P T Q
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGT-----VIQTP 241
Query: 69 VFL---VPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRP- 124
F+ P A P+PP+APAPA P A AT RP
Sbjct: 242 PFVGAAAPPAPAAPSPPAAPAPAAP-----------------AAAPPPPPPAPATLARPP 284
Query: 125 -GIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRRGRG 183
A A P P A G A P AP A GG G G G
Sbjct: 285 GHPAGPPTAAPAVPPPAAAQNGGSAGAAP----------APAPAAGGPAGVSGQPGPGAA 334
Query: 184 FSVPRKGWRRER-ERAFQA 201
+ P G + E +R QA
Sbjct: 335 AAAPAPGVKAESPKRVVQA 353
Score = 35.0 bits (79), Expect = 0.047
Identities = 53/163 (32%), Positives = 63/163 (38%), Gaps = 36/163 (22%)
Query: 8 TGGPLGPALGCSHRPSLGPLSVSHG-PAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQ 66
+G P G A GP + + G P AP P G A P PR+
Sbjct: 64 SGSPAGAA-------GAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRP--- 113
Query: 67 HEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGI 126
LVPA PAPP+A P GS+ G+C A + AAA A P
Sbjct: 114 ----LVPAG---PAPPAAKLRPPPE---GSA----GSC---APVPAAA----AVAAGPEP 152
Query: 127 ALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQAVG 169
A A A P PA A +R G G P P P PG P + G
Sbjct: 153 APAGPAKPAGPA-ALAARAGPG---PGPGPGPGPGPGPGKPAG 191
Score = 34.3 bits (77), Expect = 0.080
Identities = 43/157 (27%), Positives = 55/157 (35%), Gaps = 22/157 (14%)
Query: 11 PLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVF 70
P G A C+ P+ +V+ GP AP G A P P AA+
Sbjct: 130 PEGSAGSCAPVPAAA--AVAAGPEPAP----AGPAKP----------AGPAALAARAG-- 171
Query: 71 LVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAA 130
P P P P P +P+ + +L G A + AAA P AL
Sbjct: 172 --PGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSH-HAAAPAVSLVNNGPA-ALLP 227
Query: 131 NATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAPFQA 167
P P ++ G A PP P P P AP A
Sbjct: 228 LPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA 264
Score = 27.3 bits (59), Expect = 9.8
Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 98 SLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRD 157
SL + A A RT + AL + +PA G A P P +
Sbjct: 28 SLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPA-------GAAGAGPAAPAE 80
Query: 158 PRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRK 189
PG AP G GG G + G PR+
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQRPGPPSPRR 112
Score = 27.3 bits (59), Expect = 9.8
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 74 ARAATPAPPSAPAP----ARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALA 129
++A T PSA +P L LG ++ T ATA T +RT PG
Sbjct: 528 SQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTV-----PGATTT 582
Query: 130 ANATPRTPAEAKKSR 144
++A T KK +
Sbjct: 583 SSAATETMENVKKCK 597
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 39.3 bits (90), Expect = 0.002
Identities = 38/111 (34%), Positives = 43/111 (38%), Gaps = 16/111 (14%)
Query: 70 FLVPARAAT------PAPPSAP-APARPSLRLGSSSLTGGACCATAQLTAAARRTKATQL 122
FLVP A PAP AP APA P +S + A +A ARR+
Sbjct: 389 FLVPQAALKGGAGLEPAPKDAPPAPAVPPAPPAQASFGAFSGPGGAPDSAFARRSPDAVA 448
Query: 123 RPGIALAANATPRTPAEAKKSRLGRGQ---------ATPPPPRDPRPGTAP 164
PG A A R A A + G G A PPP PRPG P
Sbjct: 449 SPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPPPPAPSPRPGPRP 499
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.3 bits (90), Expect = 0.002
Identities = 60/195 (30%), Positives = 68/195 (34%), Gaps = 40/195 (20%)
Query: 9 GGPLGPA-LGCSHRPSLGPLSVSHGPAV-----APN----LPRTGFASPLCTHTPVHETT 58
GGP P+ G P+ P S GPA AP P + SP T P +T
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST 1034
Query: 59 DPRKEAAQHEVFLVPARAATPAPPSAPA------------PARPSLRLGSS-------SL 99
P + + AATP P AP PA PSL+ + S
Sbjct: 1035 PPAATPPSPK----GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSP 1090
Query: 100 TGGACCATAQLTAAARRTKATQLRPGIALAA---NATPRTPAEAKKSRLGRGQATPPPPR 156
GG AT A AT P LA P TPA S G G ATPPP
Sbjct: 1091 KGGP--ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKG-GLATPPPKG 1147
Query: 157 DP-RPGTAPFQAVGG 170
P P P GG
Sbjct: 1148 APTTPAATPPSPKGG 1162
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/163 (31%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 17 GCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCT-HTPVHETTDPRKEAAQHEVFLVPAR 75
G S P+ P S PA P LP+ +P T +P P + A P
Sbjct: 1031 GASTPPAATPPSPKGSPAATP-LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPS 1089
Query: 76 A----ATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAA- 130
ATP+P AP P + S GG AT A AT P LA
Sbjct: 1090 PKGGPATPSPKGAPMPPAAT----PPSPKGGL--ATPPHKGAPTTPAATPPSPKGGLATP 1143
Query: 131 --NATPRTPAEAKKSRLGRGQATPPPPRDP-RPGTAPFQAVGG 170
P TPA S G G ATPPP P P P GG
Sbjct: 1144 PPKGAPTTPAATPPSPKG-GLATPPPKGAPTTPAATPPSPKGG 1185
Score = 38.9 bits (89), Expect = 0.003
Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 8/147 (5%)
Query: 33 PAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPAPPSAPAPARPSL 92
PA P P+ G A+P P P PA P+ PA PSL
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG------PATPPPKGAPTPPAATPPSL 1274
Query: 93 RLGSSSLTGGACCATAQLTAAARRT-KATQLRPGIALAANATPRTPAEAKKSRLGRGQAT 151
+ G ++ A +T + + AT G ATP +P + + +G T
Sbjct: 1275 KGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPT 1334
Query: 152 PPPPRDPRP-GTAPFQAVGGTLGGGGT 177
PP P P GT A + GG T
Sbjct: 1335 PPAVTPPSPKGTPTLPATTPSSKGGPT 1361
Score = 38.5 bits (88), Expect = 0.004
Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 9 GGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHE 68
GGP P+ P S GPA+ P P+ G A P +P + T P
Sbjct: 1358 GGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP----SPKGDPTSP-------- 1405
Query: 69 VFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIAL 128
A P P APA P R G+++ + G A + ++ AT
Sbjct: 1406 -------AVIPLSPK-KAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATS------- 1450
Query: 129 AANATPRTPAEAKKSRLGRGQATPPPPRDP 158
A P TP+ L TPP P++P
Sbjct: 1451 APKGGPATPSSKGDPTL--PAVTPPSPKEP 1478
Score = 37.7 bits (86), Expect = 0.007
Identities = 36/136 (26%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 33 PAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPAP---PSAPAPAR 89
PA P P+ G A+P P P ATP+P P+ PA
Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG---------LATPSPKGAPTTPAATP 1248
Query: 90 PSLRLGSSSLTG-GACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRG 148
PS + G ++ GA A + + AT G A TP +P + +G
Sbjct: 1249 PSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKG 1308
Query: 149 QATPPPPRDPRPGTAP 164
TPP P P +P
Sbjct: 1309 APTPPAATPPSPKGSP 1324
Score = 37.4 bits (85), Expect = 0.009
Identities = 39/144 (27%), Positives = 50/144 (34%), Gaps = 16/144 (11%)
Query: 26 PLSVSHGPAVAPNLPRTGFASPLCTHTPVHET----------TDPRKEAAQHEVFLVPAR 75
P+ PAV P+ P+ A+P P+ T T KEA VP+
Sbjct: 1499 PMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSP 1558
Query: 76 AATPA-PPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATP 134
TPA P APA PS + SS T A K + P + +
Sbjct: 1559 KKTPAIPTPKEAPATPSSKEASS-----PPAVTPSTYKGAPSPKELLIPPAVTSPSPKEA 1613
Query: 135 RTPAEAKKSRLGRGQATPPPPRDP 158
TP +G ATP P P
Sbjct: 1614 PTPPAVTPPSPEKGPATPAPKGTP 1637
Score = 36.2 bits (82), Expect = 0.021
Identities = 49/187 (26%), Positives = 64/187 (34%), Gaps = 31/187 (16%)
Query: 9 GGPLGPAL-GCSHRPSLGPLSVSHGPAV------------APNLPRTGFASPLCTHTPVH 55
GGP P+L G P+ P S GPA P P+ G A+P P
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTT 1128
Query: 56 ET-----------TDPRKEAAQHEVFLVPARA---ATPAP---PSAPAPARPSLRLGSSS 98
T P K A P+ ATP P P+ PA PS + G ++
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 99 LTG-GACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRD 157
+ GA A + + AT G ATP +P + +G T P
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1248
Query: 158 PRPGTAP 164
P P P
Sbjct: 1249 PSPKGGP 1255
Score = 33.9 bits (76), Expect = 0.10
Identities = 47/182 (25%), Positives = 65/182 (35%), Gaps = 37/182 (20%)
Query: 5 QKATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFA------SPLCTHTPVHETT 58
+K + GP P +G LS P A LP + SP TH+P +
Sbjct: 811 KKGSAGPDTP---------IGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSP 861
Query: 59 D--PRKEA----AQHEVFLVPARAATPAP---------PSAPAPAR-PSLRLGSSSLTGG 102
P A + V L P TP+ P+ PAP + P+L + SSS
Sbjct: 862 KGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPK-- 919
Query: 103 ACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGT 162
A+ T A + A+ G ATP +P + + TPP P P
Sbjct: 920 ----KARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKG 975
Query: 163 AP 164
P
Sbjct: 976 GP 977
Score = 32.3 bits (72), Expect = 0.30
Identities = 41/168 (24%), Positives = 53/168 (31%), Gaps = 31/168 (18%)
Query: 8 TGGPLGPALGCSHRPS----LGPLSVSHGPAVAPN-------LPRTGFASPLCTHTPVHE 56
T P P+ + PS L P V+ P P P+ G A+P P
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 57 TTDPRKEAAQHEVFLVPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARR 116
T + A+ ATPAP PA P GA A + +
Sbjct: 913 MTSSSPKKAR----------ATPAPKGIPASPSPK----------GAPTPPAATPPSPKG 952
Query: 117 TKATQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
AT ATP +P + +G TPP P P P
Sbjct: 953 GPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGP 1000
Score = 27.7 bits (60), Expect = 7.5
Identities = 35/155 (22%), Positives = 51/155 (32%), Gaps = 19/155 (12%)
Query: 23 SLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPR--KEAAQHEVFLVPARAATPA 80
S P PAV P P G A+P TP P K++ + AT
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666
Query: 81 PPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARR----TKATQLRPGIALAANA---- 132
S PA+ L A +T +TA R+ K++ P I +A
Sbjct: 1667 QASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGS 1726
Query: 133 ---------TPRTPAEAKKSRLGRGQATPPPPRDP 158
P P + S+ +G+ P+ P
Sbjct: 1727 KGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGP 1761
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.003
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 22/159 (13%)
Query: 17 GCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVH---------------ETTDPR 61
G RP+ LS S P +P R+G ++ P H + T PR
Sbjct: 223 GGLQRPASRSLSSSATPLSSP--ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 280
Query: 62 KEAAQHEVFLVPARAATPAPPSAPAP-ARPSLR-LGSSSLTGGACCATAQLTAAARRTKA 119
K+AA L + ATP+P + P+P A PSL+ L S T + T+ + + T +
Sbjct: 281 KDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 340
Query: 120 TQLRPGIALAANATPRTPAEAKKSRLGRGQATPPPPRDP 158
P ++ A P+ P L QA P PP P
Sbjct: 341 FLPSPPLSPLATPPPQAPPALALPPL---QAPPSPPASP 376
Score = 35.4 bits (80), Expect = 0.036
Identities = 50/163 (30%), Positives = 63/163 (38%), Gaps = 28/163 (17%)
Query: 12 LGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFL 71
LG A +P G + + PR G P T P R E A
Sbjct: 47 LGAAGAVGRKPLAERAGGIGGATIPESAPRAG---PTRTSRP---PASGRGERAP----- 95
Query: 72 VPARAATPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAAN 131
PA+ +P P S+P A + R G G +A+ T A R KAT+ AL+A
Sbjct: 96 -PAKNTSPGPVSSPGRASGTTRPGPLGQKG--LRISAEETVA--RGKATEAPKRSALSAG 150
Query: 132 A-------TPRT--PAEAKKSRLGR---GQATPPPPRDPRPGT 162
A TP T PA A++SR G P P PRP T
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT 193
Score = 30.8 bits (68), Expect = 0.89
Identities = 39/137 (28%), Positives = 48/137 (35%), Gaps = 18/137 (13%)
Query: 78 TPAPPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARR---TKATQLRPGIALAANATP 134
TP PP +P P P L GA A + A R AT T
Sbjct: 26 TPRPPGSPRPPPPVTPAALRVL--GAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTS 83
Query: 135 RTPAEAKKSRLGRGQATPPPPR-DPRPGTAPFQAVGGTLGGGGTGRRGRGFSVPR----- 188
R PA GRG+ PP P P ++P +A GT G G++G S
Sbjct: 84 RPPAS------GRGERAPPAKNTSPGPVSSPGRA-SGTTRPGPLGQKGLRISAEETVARG 136
Query: 189 KGWRRERERAFQATCRR 205
K + A A RR
Sbjct: 137 KATEAPKRSALSAGARR 153
Score = 29.6 bits (65), Expect = 2.0
Identities = 44/160 (27%), Positives = 57/160 (35%), Gaps = 7/160 (4%)
Query: 7 ATGGPLGPALGCSHRPSLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQ 66
AT P P S PSL L PA P+ T SP T + P A
Sbjct: 296 ATPSPSAPP-SPSAPPSLQTLPSP--PATPPSQATTSLGSPTLQATHSFLPSPPLSPLAT 352
Query: 67 HEVFLVPARAATP--APPSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRP 124
PA A P APPS PA + P L + S A L A + ++
Sbjct: 353 PPPQAPPALALPPLQAPPSPPA-SPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 411
Query: 125 GIALAANATPRTPAEAKKSRLGRGQATPPPPRDPRPGTAP 164
+ A + P +P+ S+ A PP P P +P
Sbjct: 412 PFSPPA-SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 450
Score = 28.1 bits (61), Expect = 5.7
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 23 SLGPLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPAPP 82
+L PL P +P L SPL T +P P A V L+ A + P P
Sbjct: 362 ALPPLQAPPSPPASPPL------SPLATPSP----QAPNALA----VHLLQAPFSPPPSP 407
Query: 83 SAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQ-LRPGIALAANATPRTPAEAK 141
AP P S A L A + + P ++ +A P+ P
Sbjct: 408 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 467
Query: 142 KSRLGRGQATPPPPRDPRPGTAPFQAV 168
L A PPP P T P QA+
Sbjct: 468 APPLQL--AKPPPQAPPALATPPLQAL 492
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 38.5 bits (88), Expect = 0.004
Identities = 48/172 (27%), Positives = 63/172 (36%), Gaps = 14/172 (8%)
Query: 10 GPLGPALGCSHRPSLGPLSVSH-GPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHE 68
GP A+ S P+ ++V+ G ++ LP A PL + H T P +
Sbjct: 967 GPCQEAVAPSTHPTSASVTVTTPGLLLSQALPAPPGALPLAPSSTAHSQTTPPPSSRPRT 1026
Query: 69 VFLVPARAATP---APPSAPAPARPSL---RLGSSSLTGGACCATAQLTAAARRTKATQL 122
VP P PP+AP+PA PSL G S T G+ A + L
Sbjct: 1027 TASVPRTTVWPVLTVPPTAPSPA-PSLVASAFGESGSTDGSSDEELSGDQEASGGGSGGL 1085
Query: 123 RP--GIALAANATPRTPAEAKKSRLGRGQATPPPPRDPR----PGTAPFQAV 168
P G ++A P A S LG P D P T FQ V
Sbjct: 1086 EPLEGSSVATPGPPVERASCYNSALGCCSDGKTPSLDAEGSNCPATKVFQGV 1137
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 38.5 bits (88), Expect = 0.004
Identities = 36/137 (26%), Positives = 43/137 (31%), Gaps = 3/137 (2%)
Query: 26 PLSVSHGPAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPAPPSAP 85
P + P P+ P T +P T TP TT P A L P TP+PP+
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPAS-TTTLPP--TTTPSPPTTT 1529
Query: 86 APARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRL 145
P S T T+ T T + TP P S
Sbjct: 1530 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPP 1589
Query: 146 GRGQATPPPPRDPRPGT 162
TPPP P P T
Sbjct: 1590 TITTTTPPPTTTPSPPT 1606
Score = 33.1 bits (74), Expect = 0.18
Identities = 31/142 (21%), Positives = 47/142 (33%), Gaps = 12/142 (8%)
Query: 33 PAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPAP--------PSA 84
P P +T +P+ T T V T P + TP P P
Sbjct: 4140 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPT 4199
Query: 85 PAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLR----PGIALAANATPRTPAEA 140
P L +S+ + + ++ T++T L P I + + A P TP
Sbjct: 4200 HTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAP 4259
Query: 141 KKSRLGRGQATPPPPRDPRPGT 162
+ G + PP PGT
Sbjct: 4260 TTTSGGHTLSPPPSTTTSPPGT 4281
Score = 32.7 bits (73), Expect = 0.23
Identities = 33/145 (22%), Positives = 47/145 (32%), Gaps = 18/145 (12%)
Query: 33 PAVAPNLPRTGFASPLCTHTPVHETTDPRKEAAQHEVFLVPARAATPAP----------- 81
P P+ P T +P T TP TT P L P +P P
Sbjct: 1598 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTS-TTTLPPTTTPSPPPTTTTTPPPTTT 1656
Query: 82 PSAPAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAK 141
PS P PS + +++ ++ +T T P + TP +P
Sbjct: 1657 PSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTP----SPTTTPSSPITTT 1712
Query: 142 KSRLGRGQATPPPP--RDPRPGTAP 164
+ +PPP P P T P
Sbjct: 1713 TTPSSTTTPSPPPTTMTTPSPTTTP 1737
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,448,091
Number of Sequences: 37866
Number of extensions: 718793
Number of successful extensions: 9503
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 801
Number of HSP's that attempted gapping in prelim test: 7200
Number of HSP's gapped (non-prelim): 2627
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.