Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239743072
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
(837 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 1718 0.0
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 1718 0.0
gi|110832843 TBP-associated factor 4 [Homo sapiens] 60 6e-09
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 55 4e-07
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 55 4e-07
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 54 8e-07
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 50 7e-06
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 50 7e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 49 1e-05
gi|57864582 hornerin [Homo sapiens] 49 3e-05
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 49 3e-05
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 48 3e-05
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 48 3e-05
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 47 6e-05
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 47 6e-05
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 47 6e-05
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 47 6e-05
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 46 2e-04
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 46 2e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 46 2e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 45 4e-04
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 45 4e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-04
gi|150378549 tangerin [Homo sapiens] 45 4e-04
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 44 6e-04
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 44 6e-04
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 44 6e-04
gi|195947369 junction-mediating and regulatory protein [Homo sap... 44 6e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 44 6e-04
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 1718 bits (4450), Expect = 0.0
Identities = 837/837 (100%), Positives = 837/837 (100%)
Query: 1 MGAPRGSCASSSPTYHELGAPLQFQGLGRLLLQVQELLLPQEVLLDRDSALHLRPDAPPP 60
MGAPRGSCASSSPTYHELGAPLQFQGLGRLLLQVQELLLPQEVLLDRDSALHLRPDAPPP
Sbjct: 1 MGAPRGSCASSSPTYHELGAPLQFQGLGRLLLQVQELLLPQEVLLDRDSALHLRPDAPPP 60
Query: 61 CPLRGEAEAREGPHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTALSTPGPQI 120
CPLRGEAEAREGPHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTALSTPGPQI
Sbjct: 61 CPLRGEAEAREGPHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTALSTPGPQI 120
Query: 121 CRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVPDKLLLLI 180
CRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVPDKLLLLI
Sbjct: 121 CRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVPDKLLLLI 180
Query: 181 PVQPCPEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNP 240
PVQPCPEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNP
Sbjct: 181 PVQPCPEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNP 240
Query: 241 ERGTAMPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPM 300
ERGTAMPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPM
Sbjct: 241 ERGTAMPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPM 300
Query: 301 VGHCNAHRRVSHFCLTLGTRALAPESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGT 360
VGHCNAHRRVSHFCLTLGTRALAPESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGT
Sbjct: 301 VGHCNAHRRVSHFCLTLGTRALAPESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGT 360
Query: 361 RRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD 420
RRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD
Sbjct: 361 RRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD 420
Query: 421 RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPF 480
RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPF
Sbjct: 421 RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPF 480
Query: 481 MLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG 540
MLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG
Sbjct: 481 MLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG 540
Query: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600
PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL
Sbjct: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600
Query: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660
DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR
Sbjct: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660
Query: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV 720
PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV
Sbjct: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV 720
Query: 721 RSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSR 780
RSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSR
Sbjct: 721 RSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSR 780
Query: 781 RAPRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQAPLGGAE 837
RAPRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQAPLGGAE
Sbjct: 781 RAPRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQAPLGGAE 837
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 1718 bits (4450), Expect = 0.0
Identities = 837/837 (100%), Positives = 837/837 (100%)
Query: 1 MGAPRGSCASSSPTYHELGAPLQFQGLGRLLLQVQELLLPQEVLLDRDSALHLRPDAPPP 60
MGAPRGSCASSSPTYHELGAPLQFQGLGRLLLQVQELLLPQEVLLDRDSALHLRPDAPPP
Sbjct: 1 MGAPRGSCASSSPTYHELGAPLQFQGLGRLLLQVQELLLPQEVLLDRDSALHLRPDAPPP 60
Query: 61 CPLRGEAEAREGPHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTALSTPGPQI 120
CPLRGEAEAREGPHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTALSTPGPQI
Sbjct: 61 CPLRGEAEAREGPHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTALSTPGPQI 120
Query: 121 CRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVPDKLLLLI 180
CRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVPDKLLLLI
Sbjct: 121 CRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVPDKLLLLI 180
Query: 181 PVQPCPEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNP 240
PVQPCPEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNP
Sbjct: 181 PVQPCPEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNP 240
Query: 241 ERGTAMPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPM 300
ERGTAMPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPM
Sbjct: 241 ERGTAMPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPM 300
Query: 301 VGHCNAHRRVSHFCLTLGTRALAPESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGT 360
VGHCNAHRRVSHFCLTLGTRALAPESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGT
Sbjct: 301 VGHCNAHRRVSHFCLTLGTRALAPESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGT 360
Query: 361 RRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD 420
RRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD
Sbjct: 361 RRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD 420
Query: 421 RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPF 480
RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPF
Sbjct: 421 RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPF 480
Query: 481 MLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG 540
MLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG
Sbjct: 481 MLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG 540
Query: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600
PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL
Sbjct: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600
Query: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660
DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR
Sbjct: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660
Query: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV 720
PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV
Sbjct: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV 720
Query: 721 RSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSR 780
RSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSR
Sbjct: 721 RSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSR 780
Query: 781 RAPRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQAPLGGAE 837
RAPRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQAPLGGAE
Sbjct: 781 RAPRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQAPLGGAE 837
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 60.5 bits (145), Expect = 6e-09
Identities = 89/323 (27%), Positives = 125/323 (38%), Gaps = 45/323 (13%)
Query: 516 PRVRLGLEQLLGRHVGAGVRGGACG-----------------PHRGGIRGG-----RPLE 553
P VR LG HV +G GA G P G R G RP
Sbjct: 48 PEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGP 107
Query: 554 RADDRVLLAQALGPVQR-----PRGAGGRLQDPWPASLAL-AGPGIARLG-CDLDGPRAL 606
+ R L+ P P G+ G P PA+ A+ AGP A G GP AL
Sbjct: 108 PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCA-PVPAAAAVAAGPEPAPAGPAKPAGPAAL 166
Query: 607 VEGLHGRHEGGPLGGAG-GGGSGEGQGRGPGSRVSVRRSSRAPSSCRAA----SLAPPRP 661
R GP G G G G G G+ GPG+ ++ S+ +S AA SL P
Sbjct: 167 A----ARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGP 222
Query: 662 ASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVR 721
A+ P +P + G +A + A P A A+ R
Sbjct: 223 AALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLAR 282
Query: 722 ST-TPRGPEASSPRARGSFLPKSGG--GSPPRPARSLAGPSR-DDEPLAGAPEEWPPPGL 777
P GP ++P ++GG G+ P PA + GP+ +P GA P PG+
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGV 342
Query: 778 SSRRAPRFLIKSSPAPGRRALAA 800
+ +P+ +++++P P + LAA
Sbjct: 343 KA-ESPKRVVQAAP-PAAQTLAA 363
Score = 32.0 bits (71), Expect = 2.4
Identities = 48/202 (23%), Positives = 68/202 (33%), Gaps = 27/202 (13%)
Query: 57 APPPCPLRGEAEAREG---PHPHSGELGSLRAPGCSPGARKFVLSSMGHVCTPGPGNTAL 113
APP LR E G P P + + + P + A+ +++ PGPG
Sbjct: 120 APPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPG 179
Query: 114 STPGPQICRPPPLSRKPLASETISLGMASLAHGGHIEGPLTKVRKVITGNDHQLARLGVP 173
PGP +P P A++T++ G A+L + H P + N+ A L +P
Sbjct: 180 PGPGPGPGKPAG----PGAAQTLN-GSAALLNSHHAAAPAVSLV-----NNGPAALLPLP 229
Query: 174 DKLLLLIPVQPCPEQPFLPVSGPVVHTVLICSAVPC-RGPGGKPRRSCTAIRVEGGNPPV 232
P PF+ + P A P P P PP
Sbjct: 230 KPAA---PGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP----------PPA 276
Query: 233 PEAEERNPERGTAMPAQTPAGP 254
P R P P PA P
Sbjct: 277 PATLARPPGHPAGPPTAAPAVP 298
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 54.7 bits (130), Expect = 4e-07
Identities = 131/489 (26%), Positives = 164/489 (33%), Gaps = 109/489 (22%)
Query: 314 CLTLGTRALAPESF------GALGPLGVPLQLPAAARC---RASGVWETGLGSGGTRRGG 364
C+ G AP + GALG + PA C R G W RR
Sbjct: 562 CMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRRGGCWP--------RRPR 613
Query: 365 RRLGFHGAQTSKGA--LLAT--ATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD 420
RR G G G LL A AHGH V AA
Sbjct: 614 RRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVAPAAAA---------------------- 651
Query: 421 RPAAGGRRAGQHS------PRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQ 474
P A RAG+H P+V G G D +VV+ G GHL G A
Sbjct: 652 -PTAREGRAGRHGHVAVVCPQVAAGAPVGADLD-------VSVVLWVGVVGHLGRGRGAG 703
Query: 475 LEGFPFMLRAGG--------RGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLL 526
R GG RG GL L G G G LA P V Q+L
Sbjct: 704 RAEAARAAREGGPHQGVFIQRGRGGLGHRPLPGWRGQGVG-----PLAQPSV-----QVL 753
Query: 527 GRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASL 586
GR V GA +G + G P+E + A A+ R R GR+ AS+
Sbjct: 754 GR-VPRDPAVGAATVAQGPVHGHVPVE-----LTAAAAVSGRGRLRDGLGRV-----ASV 802
Query: 587 ALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSR 646
A G +A G LV+G HE G GGA GGG+ G G G+ V R R
Sbjct: 803 AAEGAQVAWAGA------VLVQG----HEAGVAGGARGGGAAAG-GPLAGAVVQRMRQRR 851
Query: 647 APSSCRAASLAPPRPASATSAGSPTSPAPPLH-------MVSTDGCSAAFLVLDSARKGD 699
+ R A AG+ H ++ C + +A
Sbjct: 852 VRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAA 911
Query: 700 RRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPS 759
+ R R+ RP A+ + + P A R+R GG+ PAR+ G
Sbjct: 912 AQGVRAAQGRAHRPGAQGA---PSHRHRPGARGRRSRRRAAVALAGGA--HPARAALGRR 966
Query: 760 RDDEPLAGA 768
R GA
Sbjct: 967 RGGGQAVGA 975
Score = 44.3 bits (103), Expect = 5e-04
Identities = 85/299 (28%), Positives = 108/299 (36%), Gaps = 45/299 (15%)
Query: 329 ALGPLG--VPLQLPAAARCRASGVWETGLGS-GGTRRGGRRLGFHGAQTSKGALLATATR 385
A GP+ VP++L AAA G GLG G ++ + GA +G A
Sbjct: 768 AQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGG 827
Query: 386 AHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGG 445
A G G L G + R RRV R G RA + R G GGG
Sbjct: 828 ARGGGAAAGGP------LAGAVVQRMRQRRVRAGRRRV--GARAVAAAGRQGAGAGGGGR 879
Query: 446 SDHGGLLFGAAVVV---LRGQHGHLRGGEVAQLEGFPFML----RAGGRGAPGLQAEELG 498
G GAAV+ R Q A +G R G +GAP +
Sbjct: 880 RVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRP-- 937
Query: 499 GLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDR 558
G G R+ A LAG LGR G G GA H+ + GG+ D+
Sbjct: 938 GARGRRSRRRAAVALAGGAHPA--RAALGRRRGGGQAVGARAAHQARLAGGQV-----DQ 990
Query: 559 VLLAQALGPVQRPRGAGGRLQDPWPASLAL-AGPGIARLGCDLDGPRALVEGLHGRHEG 616
V++A G RG P LAL A P + L+E LHG +G
Sbjct: 991 VVVAARAGDADGVRGRR-------PRRLALTARPEL----------EELLERLHGLQDG 1032
Score = 41.2 bits (95), Expect = 0.004
Identities = 93/329 (28%), Positives = 108/329 (32%), Gaps = 66/329 (20%)
Query: 344 RCRASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKAL 403
R A GV G G GG RRGG G + A L G V + L + L
Sbjct: 252 RVVALGVVGEGRGHGGDRRGG---GEGLGTVAAAAPLRVCADDLGAAVGVRGLAGLQEGL 308
Query: 404 HGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVG----LLGGGGSDHGGLLFGAAVVV 459
R L +P RRAG G L GGG L V +
Sbjct: 309 DSRHLLHEA--------QPLHARRRAGHAGSFWLRGGRDRLRRGGGHTKSHL---GVVTI 357
Query: 460 LRGQHGHLRGGEVAQLEGFPFMLRAGGR--GAPGL---QAEELGGLLGCRTGWAAGRTLA 514
+ G+ G GG+ G GR PGL + L G LG R W
Sbjct: 358 VPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQWVL----- 412
Query: 515 GPRVRLGLEQLLGRHVGAGVRGGACGPHRGG--------IRGGRPLERADDRVLLAQALG 566
V G G ++G A GPHR RP R RV + G
Sbjct: 413 ---VHAG-------QAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAG 462
Query: 567 PVQRPRGAGGRLQDPW------PASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLG 620
P GA GRL PW L A G A + P V GL G +G
Sbjct: 463 ----PEGA-GRLAGPWRGLRLQTLLLQDAPHGGAHEHVLVAVPATGVGGLVGAGQGAVAA 517
Query: 621 G--------AGGGGSGEGQGRGP-GSRVS 640
AG G GE GRG G RV+
Sbjct: 518 AGNAPERLPAGVQGCGEEVGRGARGDRVA 546
Score = 39.3 bits (90), Expect = 0.015
Identities = 112/458 (24%), Positives = 150/458 (32%), Gaps = 109/458 (23%)
Query: 331 GPLGVPLQLPAAARCRASGVWETGLGSGGTRRGGRR----LGFHGAQTSKGALLATATR- 385
G G PLQ A R + + + L + R GRR G GA LA R
Sbjct: 416 GQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRG 475
Query: 386 ---------------AHGH---GVPGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGR 427
AH H VP L A G+G G + +R AG +
Sbjct: 476 LRLQTLLLQDAPHGGAHEHVLVAVPATGVGGLVGA--GQGAVAAAG---NAPERLPAGVQ 530
Query: 428 RAGQHSPRVQVG-LLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGG 486
G+ R G + GG + + A+ +L GQ G V +
Sbjct: 531 GCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTV----------- 579
Query: 487 RGAPGLQAEELGGLLGCRTGWAA--GRTLAGPRVRLGL--EQLLGRHVGAGVRGGACGPH 542
LGG LG R G A R R R G + RH G GG GP
Sbjct: 580 ----------LGGALGGRAGLVAAPARRECPARRRGGCWPRRPRRRHGGG---GGGGGPG 626
Query: 543 RGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIAR---LGCD 599
+ GG A V++A A G GR +A+ P +A +G D
Sbjct: 627 LQDLLGGGHAGGAHGHVVVAPAAAAPTAREGRAGR-----HGHVAVVCPQVAAGAPVGAD 681
Query: 600 LDGPRALVEGLHGR----------------HEGGPLGGA----GGGGSG-------EGQG 632
LD L G+ G EGGP G G GG G GQG
Sbjct: 682 LDVSVVLWVGVVGHLGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGHRPLPGWRGQG 741
Query: 633 RGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVL 692
GP ++ SV+ R P P +AT A P P+ + + S +
Sbjct: 742 VGPLAQPSVQVLGRVPRD--------PAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLR 793
Query: 693 DSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEA 730
D + +A A+ +W + +G EA
Sbjct: 794 DGLGRVASVAAE---------GAQVAWAGAVLVQGHEA 822
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 54.7 bits (130), Expect = 4e-07
Identities = 131/489 (26%), Positives = 164/489 (33%), Gaps = 109/489 (22%)
Query: 314 CLTLGTRALAPESF------GALGPLGVPLQLPAAARC---RASGVWETGLGSGGTRRGG 364
C+ G AP + GALG + PA C R G W RR
Sbjct: 562 CMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRRGGCWP--------RRPR 613
Query: 365 RRLGFHGAQTSKGA--LLAT--ATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSD 420
RR G G G LL A AHGH V AA
Sbjct: 614 RRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVAPAAAA---------------------- 651
Query: 421 RPAAGGRRAGQHS------PRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQ 474
P A RAG+H P+V G G D +VV+ G GHL G A
Sbjct: 652 -PTAREGRAGRHGHVAVVCPQVAAGAPVGADLD-------VSVVLWVGVVGHLGRGRGAG 703
Query: 475 LEGFPFMLRAGG--------RGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLL 526
R GG RG GL L G G G LA P V Q+L
Sbjct: 704 RAEAARAAREGGPHQGVFIQRGRGGLGHRPLPGWRGQGVG-----PLAQPSV-----QVL 753
Query: 527 GRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASL 586
GR V GA +G + G P+E + A A+ R R GR+ AS+
Sbjct: 754 GR-VPRDPAVGAATVAQGPVHGHVPVE-----LTAAAAVSGRGRLRDGLGRV-----ASV 802
Query: 587 ALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSR 646
A G +A G LV+G HE G GGA GGG+ G G G+ V R R
Sbjct: 803 AAEGAQVAWAGA------VLVQG----HEAGVAGGARGGGAAAG-GPLAGAVVQRMRQRR 851
Query: 647 APSSCRAASLAPPRPASATSAGSPTSPAPPLH-------MVSTDGCSAAFLVLDSARKGD 699
+ R A AG+ H ++ C + +A
Sbjct: 852 VRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAA 911
Query: 700 RRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPS 759
+ R R+ RP A+ + + P A R+R GG+ PAR+ G
Sbjct: 912 AQGVRAAQGRAHRPGAQGA---PSHRHRPGARGRRSRRRAAVALAGGA--HPARAALGRR 966
Query: 760 RDDEPLAGA 768
R GA
Sbjct: 967 RGGGQAVGA 975
Score = 44.3 bits (103), Expect = 5e-04
Identities = 85/299 (28%), Positives = 108/299 (36%), Gaps = 45/299 (15%)
Query: 329 ALGPLG--VPLQLPAAARCRASGVWETGLGS-GGTRRGGRRLGFHGAQTSKGALLATATR 385
A GP+ VP++L AAA G GLG G ++ + GA +G A
Sbjct: 768 AQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGG 827
Query: 386 AHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGG 445
A G G L G + R RRV R G RA + R G GGG
Sbjct: 828 ARGGGAAAGGP------LAGAVVQRMRQRRVRAGRRRV--GARAVAAAGRQGAGAGGGGR 879
Query: 446 SDHGGLLFGAAVVV---LRGQHGHLRGGEVAQLEGFPFML----RAGGRGAPGLQAEELG 498
G GAAV+ R Q A +G R G +GAP +
Sbjct: 880 RVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRP-- 937
Query: 499 GLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDR 558
G G R+ A LAG LGR G G GA H+ + GG+ D+
Sbjct: 938 GARGRRSRRRAAVALAGGAHPA--RAALGRRRGGGQAVGARAAHQARLAGGQV-----DQ 990
Query: 559 VLLAQALGPVQRPRGAGGRLQDPWPASLAL-AGPGIARLGCDLDGPRALVEGLHGRHEG 616
V++A G RG P LAL A P + L+E LHG +G
Sbjct: 991 VVVAARAGDADGVRGRR-------PRRLALTARPEL----------EELLERLHGLQDG 1032
Score = 41.2 bits (95), Expect = 0.004
Identities = 93/329 (28%), Positives = 108/329 (32%), Gaps = 66/329 (20%)
Query: 344 RCRASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKAL 403
R A GV G G GG RRGG G + A L G V + L + L
Sbjct: 252 RVVALGVVGEGRGHGGDRRGG---GEGLGTVAAAAPLRVCADDLGAAVGVRGLAGLQEGL 308
Query: 404 HGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVG----LLGGGGSDHGGLLFGAAVVV 459
R L +P RRAG G L GGG L V +
Sbjct: 309 DSRHLLHEA--------QPLHARRRAGHAGSFWLRGGRDRLRRGGGHTKSHL---GVVTI 357
Query: 460 LRGQHGHLRGGEVAQLEGFPFMLRAGGR--GAPGL---QAEELGGLLGCRTGWAAGRTLA 514
+ G+ G GG+ G GR PGL + L G LG R W
Sbjct: 358 VPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQWVL----- 412
Query: 515 GPRVRLGLEQLLGRHVGAGVRGGACGPHRGG--------IRGGRPLERADDRVLLAQALG 566
V G G ++G A GPHR RP R RV + G
Sbjct: 413 ---VHAG-------QAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAG 462
Query: 567 PVQRPRGAGGRLQDPW------PASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLG 620
P GA GRL PW L A G A + P V GL G +G
Sbjct: 463 ----PEGA-GRLAGPWRGLRLQTLLLQDAPHGGAHEHVLVAVPATGVGGLVGAGQGAVAA 517
Query: 621 G--------AGGGGSGEGQGRGP-GSRVS 640
AG G GE GRG G RV+
Sbjct: 518 AGNAPERLPAGVQGCGEEVGRGARGDRVA 546
Score = 39.3 bits (90), Expect = 0.015
Identities = 112/458 (24%), Positives = 150/458 (32%), Gaps = 109/458 (23%)
Query: 331 GPLGVPLQLPAAARCRASGVWETGLGSGGTRRGGRR----LGFHGAQTSKGALLATATR- 385
G G PLQ A R + + + L + R GRR G GA LA R
Sbjct: 416 GQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRG 475
Query: 386 ---------------AHGH---GVPGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGR 427
AH H VP L A G+G G + +R AG +
Sbjct: 476 LRLQTLLLQDAPHGGAHEHVLVAVPATGVGGLVGA--GQGAVAAAG---NAPERLPAGVQ 530
Query: 428 RAGQHSPRVQVG-LLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGG 486
G+ R G + GG + + A+ +L GQ G V +
Sbjct: 531 GCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTV----------- 579
Query: 487 RGAPGLQAEELGGLLGCRTGWAA--GRTLAGPRVRLGL--EQLLGRHVGAGVRGGACGPH 542
LGG LG R G A R R R G + RH G GG GP
Sbjct: 580 ----------LGGALGGRAGLVAAPARRECPARRRGGCWPRRPRRRHGGG---GGGGGPG 626
Query: 543 RGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIAR---LGCD 599
+ GG A V++A A G GR +A+ P +A +G D
Sbjct: 627 LQDLLGGGHAGGAHGHVVVAPAAAAPTAREGRAGR-----HGHVAVVCPQVAAGAPVGAD 681
Query: 600 LDGPRALVEGLHGR----------------HEGGPLGGA----GGGGSG-------EGQG 632
LD L G+ G EGGP G G GG G GQG
Sbjct: 682 LDVSVVLWVGVVGHLGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGHRPLPGWRGQG 741
Query: 633 RGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVL 692
GP ++ SV+ R P P +AT A P P+ + + S +
Sbjct: 742 VGPLAQPSVQVLGRVPRD--------PAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLR 793
Query: 693 DSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEA 730
D + +A A+ +W + +G EA
Sbjct: 794 DGLGRVASVAAE---------GAQVAWAGAVLVQGHEA 822
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 53.5 bits (127), Expect = 8e-07
Identities = 81/309 (26%), Positives = 111/309 (35%), Gaps = 22/309 (7%)
Query: 508 AAGRTLAGPRVRLGL---EQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQA 564
AA R+ G +L +QL + G GP GG E+A A
Sbjct: 55 AATRSPVGAGTKLNSVRQQQLQQQQQQGNKTGSRTGPPASIRGGGGGAEKATPLAPKGAA 114
Query: 565 LGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLG-GAG 623
G VQ GA + PA+ LA G R G + PR L E PLG G G
Sbjct: 115 PGAVQPVAGA-----EAAPAA-TLAALGGRRPGPPEEPPRELESVPSKLGEPPPLGEGGG 168
Query: 624 GGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMV-ST 682
GGG G G G G G R P R + + S G SP+P T
Sbjct: 169 GGGEGGGAGGGSGEREGGAPQPPPPRGWRGKGVRAQQRGG--SGGEGASPSPSSSSAGKT 226
Query: 683 DGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPK 742
G + ++ G GG W+ S + + A++ A K
Sbjct: 227 PGTGSR-----NSGSGVAGGGSGGGGSYWKEGCLQSELIQFHLKKERAAAAAAAAQMHAK 281
Query: 743 SGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARA 802
+GGGS R + ++GP E LA A P ++ P+ + S + G AA
Sbjct: 282 NGGGSSSR-SSPVSGPPAVCETLAVASAS---PMAAAAEGPQQSAEGSASGGGMQAAAPP 337
Query: 803 ANHAHVNTL 811
++ H L
Sbjct: 338 SSQPHPQQL 346
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 50.4 bits (119), Expect = 7e-06
Identities = 71/253 (28%), Positives = 93/253 (36%), Gaps = 47/253 (18%)
Query: 589 AGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGS--GEGQGR----GPGSRVSVR 642
AG I R G PR G G G GGAGGGG G+GR G G R +
Sbjct: 67 AGSAILRAGSR--SPRGAGPGAAGPRAAGR-GGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
Query: 643 RSSRAPSSCRAASLAPPR--PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDR 700
R +PS CR++S A R A SPA + + + + AR
Sbjct: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
Query: 701 RSARRGGPR--SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSG-------------- 744
+A+R P+ S +AR R++ P P P R +P+ G
Sbjct: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGG 243
Query: 745 -GGS---PPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPA--PGRRAL 798
GG+ PPRP R L P+ P W R L +PA R +
Sbjct: 244 RGGAQRIPPRPLRRLV-------PIHPHPSHW-------SFCTRLLEGWAPAVTHSERLV 289
Query: 799 AARAANHAHVNTL 811
AA H H + L
Sbjct: 290 AAHTYTHIHTHVL 302
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 50.4 bits (119), Expect = 7e-06
Identities = 71/253 (28%), Positives = 93/253 (36%), Gaps = 47/253 (18%)
Query: 589 AGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGS--GEGQGR----GPGSRVSVR 642
AG I R G PR G G G GGAGGGG G+GR G G R +
Sbjct: 67 AGSAILRAGSR--SPRGAGPGAAGPRAAGR-GGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
Query: 643 RSSRAPSSCRAASLAPPR--PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDR 700
R +PS CR++S A R A SPA + + + + AR
Sbjct: 124 RGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAG 183
Query: 701 RSARRGGPR--SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSG-------------- 744
+A+R P+ S +AR R++ P P P R +P+ G
Sbjct: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGG 243
Query: 745 -GGS---PPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPA--PGRRAL 798
GG+ PPRP R L P+ P W R L +PA R +
Sbjct: 244 RGGAQRIPPRPLRRLV-------PIHPHPSHW-------SFCTRLLEGWAPAVTHSERLV 289
Query: 799 AARAANHAHVNTL 811
AA H H + L
Sbjct: 290 AAHTYTHIHTHVL 302
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 49.3 bits (116), Expect = 1e-05
Identities = 57/198 (28%), Positives = 68/198 (34%), Gaps = 15/198 (7%)
Query: 612 GRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671
G P GG+G G G G S R A S S PR +A +PT
Sbjct: 296 GSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPT 355
Query: 672 SPA------PPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARA-SWVRSTT 724
PA P S+ G R+ RR RR + P R R
Sbjct: 356 PPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAP 415
Query: 725 PRGPEASSPRARGSFLPKSGGGSP-----PRPARSLAG---PSRDDEPLAGAPEEWPPPG 776
PRG S RAR S SG G+P P R G +++ P A P PG
Sbjct: 416 PRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPG 475
Query: 777 LSSRRAPRFLIKSSPAPG 794
RR SS +PG
Sbjct: 476 AHGRRGGPEGKSSSRSPG 493
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/268 (26%), Positives = 84/268 (31%), Gaps = 41/268 (15%)
Query: 535 RGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPAS--------- 585
R A P R G R RP L++A G G P P S
Sbjct: 397 RSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGK 456
Query: 586 LALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSS 645
A P AR P G HGR GG G+ R PG SS
Sbjct: 457 RAKERPPRARPASTSPSP-----GAHGRR---------GGPEGKSSSRSPGPHPRSWSSS 502
Query: 646 RAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRS--- 702
R+PS R+ S A RP S + + SP P DG A A + RRS
Sbjct: 503 RSPSKSRSRS-AEKRPHSPSRSPSPKKPLSR----DKDGEGRARHSEAEATRARRRSRSY 557
Query: 703 -----ARRGGPRSWRPSARASWVRSTTP---RGPEASSPRARGSFLPKSGGGSPP--RPA 752
RR P P S + P P +SS + +S SP
Sbjct: 558 SPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPGHSH 617
Query: 753 RSLAGPSRDDEPLAGAPEEWPPPGLSSR 780
S + S +P P P SR
Sbjct: 618 GSYSSRSHGTRSRTRSPSRTPSPSYHSR 645
Score = 31.2 bits (69), Expect = 4.2
Identities = 49/185 (26%), Positives = 64/185 (34%), Gaps = 34/185 (18%)
Query: 627 SGEGQGRGPGSRVS-VRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGC 685
SG + R SR S +R + R + +P R + S+GS SP+ H
Sbjct: 216 SGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHY------ 269
Query: 686 SAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEAS------SPRARGSF 739
D RS R P+ + RS+ R P S SP+ G
Sbjct: 270 ------------SDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGS 317
Query: 740 LPKSG--GGSP-----PRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPA 792
+SG GG P P S P D+ A AP PP +PR S
Sbjct: 318 GQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPT--PPARGKESPSPRSAPSSQGR 375
Query: 793 PGRRA 797
GR A
Sbjct: 376 GGRAA 380
Score = 30.8 bits (68), Expect = 5.4
Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 1/118 (0%)
Query: 186 PEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNPERGTA 245
P++P P P RG RS + + GG R R
Sbjct: 335 PDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRR 394
Query: 246 MPAQTPAGPSVRRDSRAARHGEKRVDEGAWTRASRATWTSNINAAQRPSPSPGPMVGH 303
+ + P RR R R R + +RA ++ + + A P P PG GH
Sbjct: 395 RSRSSASAPR-RRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGH 451
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 48.5 bits (114), Expect = 3e-05
Identities = 123/529 (23%), Positives = 178/529 (33%), Gaps = 78/529 (14%)
Query: 346 RASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHG 405
++SG + G SG + G+ G +S G AT+ ++ HG HG
Sbjct: 593 QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQ------------HG 640
Query: 406 RGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHG 465
G S+ S R G +GQ R + G G S +G G+ G HG
Sbjct: 641 SGSSQ--------SSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHG 692
Query: 466 HLRGGEVAQLEGFPFMLRAG---GRGAPGLQAEELGGLL--GCRTGWAAGRTLAGPRVRL 520
+ G Q GF +G G G + G G R+G ++ G
Sbjct: 693 SVSG----QSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSS-- 746
Query: 521 GLEQLLGRH-------VGAGVRGGACGPHRGGIRGGRPLERADDRVL------------- 560
GL G+H G G +G G +R G +
Sbjct: 747 GLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGH 806
Query: 561 ----LAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLH----- 611
QA G Q G+G AS + G R G ++ G H
Sbjct: 807 YESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQG--RHGST--SGQSSSSGQHDSSSG 862
Query: 612 -----GRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATS 666
G+HE +G G G G G+ PG S ++PS R S R +S+
Sbjct: 863 QSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGS-GSGRSSSSGR 921
Query: 667 AGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSW---RPSARASWVRST 723
GS + + S+ G S+ + S G S + G RS R S S+
Sbjct: 922 HGSGSGQSSGFGHKSSSGQSSGYTQHGSG-SGHSSSYEQHGSRSGQSSRSEQHGSSSGSS 980
Query: 724 TPRGPEASSPR-ARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRA 782
+ G S R + G SG G P P+R G G G SS R
Sbjct: 981 SSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRS--GSGWSSSRG 1038
Query: 783 PRFLIKSSPAPGRRALAARAANHAHVNTLAHSHSYKTNYGPRGSSSFQA 831
P + S + G +R+ + S + + +G GS+S Q+
Sbjct: 1039 P-YESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQS 1086
Score = 47.4 bits (111), Expect = 6e-05
Identities = 100/442 (22%), Positives = 142/442 (32%), Gaps = 61/442 (13%)
Query: 346 RASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHG 405
++ G + G GSG + GR G +S G + + ++ G G + HG
Sbjct: 889 QSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHG 948
Query: 406 RGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHG 465
G H G R+GQ S Q G G S +G G+ + GQHG
Sbjct: 949 SGSGHSSSYEQH--------GSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHG 1000
Query: 466 HLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQL 525
G + + GR G G +GW++ R GP E
Sbjct: 1001 SGSGQSPSP---------SRGRHGSGSGQSSSYGPYRSGSGWSSSR---GP-----YESG 1043
Query: 526 LGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPAS 585
G G G R G G + G + G
Sbjct: 1044 SGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS---------------- 1087
Query: 586 LALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSS 645
C G + HG+H G +G G G G G+ PG S
Sbjct: 1088 -----------SCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSR 1136
Query: 646 RAPSSCRAASLAPPRPASATSAGSPTSPAPPL-HMVSTDGCSAAFLVLDSA---RKGDRR 701
++PS R S R +S+ GS + H S+ G S+++ S G +
Sbjct: 1137 QSPSYGRHGS-GSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQ 1195
Query: 702 SARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRD 761
R G +S R S S++ G S R + S + G GS P+R G
Sbjct: 1196 HGSRSG-QSSRGERHGSSSGSSSHYGQHGSGSR-QSSGHGRQGSGSGHSPSRGRHGSGLG 1253
Query: 762 DEPLAGAPEEWPPPGLSSRRAP 783
G + G SS R P
Sbjct: 1254 HSSSHG--QHGSGSGRSSSRGP 1273
Score = 45.4 bits (106), Expect = 2e-04
Identities = 101/447 (22%), Positives = 140/447 (31%), Gaps = 85/447 (19%)
Query: 347 ASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGR 406
+S + G GSG + GR G + G +++ ++ G+ HG
Sbjct: 1842 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGY------------TQHGS 1889
Query: 407 GLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGH 466
G H G R+GQ S Q G G S +G G+ + GQHG
Sbjct: 1890 GSGHSSSYEQH--------GSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGS 1941
Query: 467 LRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLL 526
G + + GR G G G +GW++ R GP E
Sbjct: 1942 GSGQSPSP---------SRGRHGSGSGQSSSYGPYGSGSGWSSSR---GP-----YESGS 1984
Query: 527 GRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASL 586
G G G R G G + G + A G
Sbjct: 1985 GHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSS----------------- 2027
Query: 587 ALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQG-------RGPGSRV 639
C G + HG+H G +G G G G G RG GSR
Sbjct: 2028 ----------SCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 2077
Query: 640 SVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSA---R 696
S S R++S P S+G H S+ G S+++ S
Sbjct: 2078 SPSYGRHGSGSGRSSSSGQHGPGLGESSGFG-------HHESSSGQSSSYSQHGSGSGHS 2130
Query: 697 KGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLA 756
G + R G +S R S S++ G S R + S + G GS P+R
Sbjct: 2131 SGYGQHGSRSG-QSSRGERHGSSSGSSSRYGQHGSGSR-QSSGHGRQGSGSGHSPSRGRH 2188
Query: 757 GPSRDDEPLAGAPEEWPPPGLSSRRAP 783
G G + G SS R P
Sbjct: 2189 GSGSGHSSSHG--QHGSGSGRSSSRGP 2213
Score = 43.9 bits (102), Expect = 6e-04
Identities = 101/456 (22%), Positives = 150/456 (32%), Gaps = 75/456 (16%)
Query: 346 RASGVWETGLGSGGTRRGGRRLGFHGAQTS-----KGALLATATRAHGHGVPGKAATVLY 400
++SG G GSG + GR G +S G+ ++++ HG G + +
Sbjct: 1345 QSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHH 1404
Query: 401 KAL---------HGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGL 451
++ HG G H G R+GQ S + G G S +G
Sbjct: 1405 ESSSWQSSGCTQHGSGSGHSSSYEQH--------GSRSGQSSRGERHGSSSGSSSSYGQH 1456
Query: 452 LFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGR 511
G+ + GQHG G + + GR G G +GW++ R
Sbjct: 1457 GSGSRQSLGHGQHGSGSGQSPSP---------SRGRHGSGSGQSSSYSPYGSGSGWSSSR 1507
Query: 512 TLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRP 571
GP+ G L + R Q+ G Q
Sbjct: 1508 ----------------------------GPYESGSSHSSGLGHRESRS--GQSSGYGQHG 1537
Query: 572 RGAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQ 631
+G S + C G + HG+H G +G G G G
Sbjct: 1538 SSSGHSSTHGQHGSTSGQSSS-----CGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGS 1592
Query: 632 GRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPL-HMVSTDGCSAAFL 690
G+ PG S ++PS R S R +S+ GS + H S+ G S+++
Sbjct: 1593 GQSPGHGQRGSGSRQSPSYGRHGS-GSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYS 1651
Query: 691 VLDSA---RKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGS 747
S G + R G +S R S RS++ G S R + S + G GS
Sbjct: 1652 QHGSGSGHSSGYGQHGSRSG-QSSRGERHGSSSRSSSRYGQHGSGSR-QSSGHGRQGSGS 1709
Query: 748 PPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAP 783
P+R G G + G SS R P
Sbjct: 1710 GQSPSRGRHGSGLGHSSSHG--QHGSGSGRSSSRGP 1743
Score = 41.2 bits (95), Expect = 0.004
Identities = 117/537 (21%), Positives = 172/537 (32%), Gaps = 99/537 (18%)
Query: 347 ASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVL-YKALHG 405
+SG + G SG + RG R G+ + G + + ++ GHG G + + HG
Sbjct: 1190 SSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHG 1249
Query: 406 RGLSRPVGRRVHVSDRPAAGGR-----RAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVL 460
GL H S + R R+G S Q G S + G+
Sbjct: 1250 SGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCS 1309
Query: 461 RGQHGHL----------------------RGGEVAQLEGFPFMLRAGGRGAPGLQAEELG 498
+GQHG RG +Q G+ G GA Q+ G
Sbjct: 1310 QGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGY------GRHGAGSGQSPSRG 1363
Query: 499 ------------GLLGCRTGWAA--GRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRG 544
G G +GW++ GR +G G G H + + C H
Sbjct: 1364 RHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGS----GQSSGFGHHESSSWQSSGCTQHGS 1419
Query: 545 GIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDGPR 604
G E+ R Q RG +S G G +
Sbjct: 1420 GSGHSSSYEQHGSR--------SGQSSRGERHGSSSGSSSSYGQHGSG---------SRQ 1462
Query: 605 ALVEGLHGRHEG---GPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAP---SSCRAASLAP 658
+L G HG G P G G GSG+ P S SSR P S ++ L
Sbjct: 1463 SLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGH 1522
Query: 659 PRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARAS 718
S S+G + H ST G + G S + G S + S+
Sbjct: 1523 RESRSGQSSGYGQHGSSSGHS-STHG-------QHGSTSGQSSSCGQHGASSGQSSSHG- 1573
Query: 719 WVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLS 778
+ S ++ S + G GS P G P G S
Sbjct: 1574 ----------QHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSS 1623
Query: 779 SRRAPRFLIKSSPAPGRRALAARAANHA-HVNTLAHSHSYKTNYGPRGSSSFQAPLG 834
S + L +SS + + ++++++ H + HS + YG GS S Q+ G
Sbjct: 1624 SGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHS----SGYGQHGSRSGQSSRG 1676
Score = 41.2 bits (95), Expect = 0.004
Identities = 97/441 (21%), Positives = 140/441 (31%), Gaps = 73/441 (16%)
Query: 347 ASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGR 406
+S + G GSG + GR G + G +++ ++ G+ HG
Sbjct: 2312 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGY------------TQHGS 2359
Query: 407 GLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGH 466
G H G R+GQ S + G G S +G G+ + GQHG
Sbjct: 2360 GSGHSSSYEQH--------GSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGS 2411
Query: 467 LRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLL 526
G + + GR G G +GW++ R GP E
Sbjct: 2412 GSGQSPSP---------SRGRHGSGSGQSSSYSPYGSGSGWSSSR---GP-----YESGS 2454
Query: 527 GRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASL 586
G G G R G G + G + G
Sbjct: 2455 GHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS----------------- 2497
Query: 587 ALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSR 646
C G + HG+H G +G G G G G+ PG S +
Sbjct: 2498 ----------SCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 2547
Query: 647 APSSCRAASLAPPRPASATSAGSPTSPAPPL-HMVSTDGCSAAFLVLDSA---RKGDRRS 702
+PS R S R +S+ GS + H S+ G S+++ S G +
Sbjct: 2548 SPSYGRHGS-GSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQH 2606
Query: 703 ARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDD 762
R G +S R S S++ G S R + S + G GS P+R G
Sbjct: 2607 GSRSG-QSSRGERHGSSSGSSSHYGQHGSGSR-QSSGHGRQGSGSGQSPSRGRHGSGLGH 2664
Query: 763 EPLAGAPEEWPPPGLSSRRAP 783
G + G SS R P
Sbjct: 2665 SSSHG--QHGSGSGRSSSRGP 2683
Score = 37.7 bits (86), Expect = 0.045
Identities = 113/513 (22%), Positives = 163/513 (31%), Gaps = 88/513 (17%)
Query: 346 RASGVWETGLGSGGTRRGGRR---------LGFHGAQTSKGALLATATRAHGHGV----- 391
++SG G GSG + GR G HG+ + + + GH
Sbjct: 1698 QSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQH 1757
Query: 392 -PGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGG 450
G + Y HG G + H G +GQ S Q G G S HG
Sbjct: 1758 ESGSGHSSAYSQ-HGSGSGHFCSQGQH--------GSTSGQSSTFDQEGSSTGQSSSHGQ 1808
Query: 451 LLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGW--A 508
G++ GQ G G ++ GR G G G +GW +
Sbjct: 1809 HGSGSSQSSSYGQQGSGSGQSPSR-----------GRHGSGSGHSSSYGQHGSGSGWSSS 1857
Query: 509 AGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPV 568
+GR +G G G H + + H G E+ R
Sbjct: 1858 SGRHGSGS----GQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSR--------SG 1905
Query: 569 QRPRGAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEG---GPLGGAGGG 625
Q RG +S G G ++L G HG G P G G
Sbjct: 1906 QSSRGEQHGSSSGSSSSYGQHGSG---------SRQSLGHGQHGSGSGQSPSPSRGRHGS 1956
Query: 626 GSGEGQGRGPGSRVSVRRSSRAP---SSCRAASLAPPRPASATSAGSPTSPAPPLHMVST 682
GSG+ GP S SSR P S ++ L S S+G + H ST
Sbjct: 1957 GSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHS-ST 2015
Query: 683 DGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPK 742
G + G S + G S + S+ + S ++ S +
Sbjct: 2016 HG-------QHGSASGQSSSCGQHGASSGQSSSHG-----------QHGSGSSQSSGYGR 2057
Query: 743 SGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARA 802
G GS P G P G SS + L +SS + + ++
Sbjct: 2058 QGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQS 2117
Query: 803 ANHA-HVNTLAHSHSYKTNYGPRGSSSFQAPLG 834
++++ H + HS + YG GS S Q+ G
Sbjct: 2118 SSYSQHGSGSGHS----SGYGQHGSRSGQSSRG 2146
Score = 37.4 bits (85), Expect = 0.058
Identities = 117/505 (23%), Positives = 171/505 (33%), Gaps = 96/505 (19%)
Query: 346 RASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHG 405
++SG + G GSG + G+ G Q+S+G +++ G +++ HG
Sbjct: 240 QSSGYSQHGSGSGHSSGYGQH-GSRSGQSSRGERHRSSS--------GSSSSY---GQHG 287
Query: 406 RGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHG 465
G + +G R +G R++ H V+ G G S HG G++ RG
Sbjct: 288 SGSRQSLGH-----GRQGSGSRQSPSH---VRHGSGSGHSSSHGQHGSGSSYSYSRG--- 336
Query: 466 HLRGGEVAQLEGFPFMLRAGGRGA------PGLQAEELGGLLGCRTGWAAGRTLAGPRVR 519
H G Q GF G+ + G G G +G A+ G R
Sbjct: 337 HYESGS-GQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSR 395
Query: 520 LGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQ 579
G+H A G H G Q+ G QR G+G Q
Sbjct: 396 QSSSY--GQHESASRHSSGRGQHSSGS---------------GQSPGHGQRGSGSG---Q 435
Query: 580 DPWPASLALAGPGIARLGCDLDGPRALVEGLH---GRHEGGPLGGAG----GGGSGEGQG 632
P S G G R GP G G HE +G G GSG G
Sbjct: 436 SP---SSGQHGTGFGRSSSS--GPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSG 490
Query: 633 RGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVL 692
G + SR+ S R +SAGS +S S + L
Sbjct: 491 HG-------QHGSRSGQSSRGER-------QGSSAGSSSSYG--------QHGSGSRQSL 528
Query: 693 DSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPA 752
+R G S + P R + + S P G + +RG + SG S
Sbjct: 529 GHSRHGSG-SGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQ 587
Query: 753 RSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLI--KSSPAPGRRALAARAANHAHVNT 810
S +G S +G + G SS +SS A + ++++H +
Sbjct: 588 ESRSGQS------SGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGS 641
Query: 811 LAHSHSYKTNYGPRGSSSFQAPLGG 835
S + YG +GS S Q+P G
Sbjct: 642 ---GSSQSSRYGQQGSGSGQSPSRG 663
Score = 37.4 bits (85), Expect = 0.058
Identities = 108/492 (21%), Positives = 158/492 (32%), Gaps = 75/492 (15%)
Query: 354 GLGSGGTRRGGRRLGFHGAQTSKGALLATA--TRAHGHGVPGKAATVLYKALHGRGLSRP 411
G GSG + G+ G +S+G + + + G G + Y HG G
Sbjct: 2189 GSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQ-HGSGSGHF 2247
Query: 412 VGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGE 471
+ H G +GQ S Q G G S HG G++ GQ G G
Sbjct: 2248 CSQGQH--------GSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQS 2299
Query: 472 VAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGW--AAGRTLAGPRVRLGLEQLLGRH 529
++ GR G G G +GW ++GR +G G G H
Sbjct: 2300 PSR-----------GRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGS----GQSSGFGHH 2344
Query: 530 VGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALA 589
+ + H G E+ R Q RG +S
Sbjct: 2345 ESSSWQSSGYTQHGSGSGHSSSYEQHGSR--------SGQSSRGERHGSSSGSSSSYGQH 2396
Query: 590 GPGIARLGCDLDGPRALVEGLHGRHEG---GPLGGAGGGGSGEGQGRGPGSRVSVRRSSR 646
G G ++L G HG G P G G GSG+ P S SSR
Sbjct: 2397 GSG---------SRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSR 2447
Query: 647 AP---SSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSA 703
P S ++ L S S+G + H ST G + G S
Sbjct: 2448 GPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHS-STHG-------QHGSTSGQSSSC 2499
Query: 704 RRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDE 763
+ G S + S+ + S ++ S + G GS P G
Sbjct: 2500 GQHGASSGQSSSHG-----------QHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQS 2548
Query: 764 PLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAANHA-HVNTLAHSHSYKTNYG 822
P G SS + L +SS + + ++++++ H + HS + YG
Sbjct: 2549 PSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHS----SGYG 2604
Query: 823 PRGSSSFQAPLG 834
GS S Q+ G
Sbjct: 2605 QHGSRSGQSSRG 2616
Score = 33.1 bits (74), Expect = 1.1
Identities = 70/309 (22%), Positives = 99/309 (32%), Gaps = 40/309 (12%)
Query: 346 RASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATA--TRAHGHGVPGKAATVLYKAL 403
++ G + G GSG + G+ G +S G ++ + + GH + Y
Sbjct: 422 QSPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQ- 480
Query: 404 HGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQ 463
HG G G H G R+GQ S + G G S +G G+ R
Sbjct: 481 HGSGSGHSSGHGQH--------GSRSGQSSRGERQGSSAGSSSSYGQHGSGS-----RQS 527
Query: 464 HGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRT----------- 512
GH R G + P + GR G + G G +G ++ R
Sbjct: 528 LGHSRHGSGSGQSPSP----SRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSG 583
Query: 513 LAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPR 572
L R G G+H + G H G G+ Q+ Q
Sbjct: 584 LGHQESRSGQSSGYGQHGSSSGHSSTHGQH--GSTSGQSSSCGQHGATSGQSSSHGQHGS 641
Query: 573 GAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEG-----GPLGGAGGGGS 627
G+ + S + P R G D + G HG G GP G G S
Sbjct: 642 GSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSY--GQHGSGSGWSSSNGPHGSVSGQSS 699
Query: 628 GEGQGRGPG 636
G G G G
Sbjct: 700 GFGHKSGSG 708
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 48.5 bits (114), Expect = 3e-05
Identities = 95/346 (27%), Positives = 128/346 (36%), Gaps = 58/346 (16%)
Query: 328 GALGPLGVPLQLPAAARCRASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRAH 387
G GP+G PL LP R + G G+R LG G Q +KG R
Sbjct: 897 GVPGPIG-PLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRG- 954
Query: 388 GHGVPGKAATVLYKALHGR----GLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLGG 443
HG+ GK + G+ GL G R + P G + G P ++G+ G
Sbjct: 955 PHGLIGKTGNPGERGFQGKPGLQGLPGSTGDR-GLPGEPGLRGLQ-GDVGPPGEMGMEGP 1012
Query: 444 GGSD----------------HGGLLFGAAVVVLRGQHGHLRGGEVAQ----LEGFPFMLR 483
G++ G + G LRG+ G G E Q L+G P
Sbjct: 1013 PGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPG-APGEEGLQGKDGLKGVP---- 1067
Query: 484 AGGRGAPGLQAEE----LGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRG--- 536
GGRG PG E+ L G++G G + L GP +G+ GR G +G
Sbjct: 1068 -GGRGLPGEDGEKGEMGLPGIIG-PLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIG 1125
Query: 537 -----GACGP----HRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLA 587
G+ GP + G +G R A + L +GP P G R P
Sbjct: 1126 PTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGL---MGPDGEPGIPGYRGHQGQPGPSG 1182
Query: 588 LAGPGIARLGCDLDGPRALVEGLHG-RHEGGPLGGAGGGGSGEGQG 632
L GP + G + V G G R E GP+G G G +G
Sbjct: 1183 LPGPKGEK---GYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEG 1225
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 48.1 bits (113), Expect = 3e-05
Identities = 139/517 (26%), Positives = 172/517 (33%), Gaps = 99/517 (19%)
Query: 328 GALGPLGVPLQLPAAARCRASGVWETG----LGSGGTRRGGRRLGFHGAQTSKGALLATA 383
G GP G P PA + E G +G G R GF G G A
Sbjct: 474 GPAGPQGAPG--PAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPG 531
Query: 384 TR----------AHGH-GVPGKAATVLYKALHGR-GLSRPVGRRVHVSDRPAAGGRRA-- 429
R A+G G PG+ + L GR G + P G+ V S P GR
Sbjct: 532 ERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGK-VGPSGAPGEDGRPGPP 590
Query: 430 GQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGA 489
G R Q G++G G +G +G L G P G RG
Sbjct: 591 GPQGARGQPGVMGFPGP--------------KGANGEPGKAGEKGLPGAP-----GLRGL 631
Query: 490 PGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLG---------RHVGAGVRGGACG 540
PG E G A R G G + L G + GV G A
Sbjct: 632 PGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGA 691
Query: 541 PHRGGIRGGR--PLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLA-LAGPGIARLG 597
P G RG R P ER AQ L Q PRG G P + AGP A+
Sbjct: 692 PGLVGPRGERGFPGERGSPG---AQGL---QGPRGLPGTPGTDGPKGASGPAGPPGAQ-- 743
Query: 598 CDLDGPRALVEGLHGRHEGGPLGGAGG--GGSGE-------GQGRGPGSRVSVRRSSRAP 648
GP L +G+ G + G G G GE G+ G G + A
Sbjct: 744 ----GPPGL-QGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAG 798
Query: 649 SSCRAASLAPPRPA-SATSAGSP-----TSPAPPLHMVSTDGCSAAFLVLDSARKGDRRS 702
++ + PP PA SA + G+P T P P G KG++
Sbjct: 799 ANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG-----QPGAKGEQGE 853
Query: 703 ARR----GGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGP 758
A + G P PS T GP+ ARG+ P G P R GP
Sbjct: 854 AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKG----ARGAQGPPGATGFPGAAGR--VGP 907
Query: 759 SRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGR 795
+ G P PPG S + P+ S PGR
Sbjct: 908 PGSN----GNPGPPGPPGPSGKDGPKGARGDSGPPGR 940
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 48.1 bits (113), Expect = 3e-05
Identities = 139/517 (26%), Positives = 172/517 (33%), Gaps = 99/517 (19%)
Query: 328 GALGPLGVPLQLPAAARCRASGVWETG----LGSGGTRRGGRRLGFHGAQTSKGALLATA 383
G GP G P PA + E G +G G R GF G G A
Sbjct: 405 GPAGPQGAPG--PAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPG 462
Query: 384 TR----------AHGH-GVPGKAATVLYKALHGR-GLSRPVGRRVHVSDRPAAGGRRA-- 429
R A+G G PG+ + L GR G + P G+ V S P GR
Sbjct: 463 ERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGK-VGPSGAPGEDGRPGPP 521
Query: 430 GQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGA 489
G R Q G++G G +G +G L G P G RG
Sbjct: 522 GPQGARGQPGVMGFPGP--------------KGANGEPGKAGEKGLPGAP-----GLRGL 562
Query: 490 PGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLG---------RHVGAGVRGGACG 540
PG E G A R G G + L G + GV G A
Sbjct: 563 PGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGA 622
Query: 541 PHRGGIRGGR--PLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLA-LAGPGIARLG 597
P G RG R P ER AQ L Q PRG G P + AGP A+
Sbjct: 623 PGLVGPRGERGFPGERGSPG---AQGL---QGPRGLPGTPGTDGPKGASGPAGPPGAQ-- 674
Query: 598 CDLDGPRALVEGLHGRHEGGPLGGAGG--GGSGE-------GQGRGPGSRVSVRRSSRAP 648
GP L +G+ G + G G G GE G+ G G + A
Sbjct: 675 ----GPPGL-QGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAG 729
Query: 649 SSCRAASLAPPRPA-SATSAGSP-----TSPAPPLHMVSTDGCSAAFLVLDSARKGDRRS 702
++ + PP PA SA + G+P T P P G KG++
Sbjct: 730 ANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG-----QPGAKGEQGE 784
Query: 703 ARR----GGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARSLAGP 758
A + G P PS T GP+ ARG+ P G P R GP
Sbjct: 785 AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKG----ARGAQGPPGATGFPGAAGR--VGP 838
Query: 759 SRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGR 795
+ G P PPG S + P+ S PGR
Sbjct: 839 PGSN----GNPGPPGPPGPSGKDGPKGARGDSGPPGR 871
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 47.4 bits (111), Expect = 6e-05
Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 693 DSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPA 752
DSA++ RR RR PR R AR VR + PR G+ P S PP P
Sbjct: 160 DSAQQR-RRPTRR--PRGTRGGARRPGVRGQGAAAVGPTGPRPTGA--PPSRRTPPPGPR 214
Query: 753 RSLAGP--------SRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAAN 804
R L P +R P AGAPE PP ++R +PAP + +AR
Sbjct: 215 RPLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTR---------APAPLTLSFSARGLA 265
Query: 805 HAHVNTLAHSHSYKTNYGPR-GSSSFQAPLGGAE 837
A + +H + + + G + +PLG E
Sbjct: 266 WAGESPASHQSERRWQWTRKLGCRCYCSPLGSGE 299
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 47.4 bits (111), Expect = 6e-05
Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 693 DSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPA 752
DSA++ RR RR PR R AR VR + PR G+ P S PP P
Sbjct: 160 DSAQQR-RRPTRR--PRGTRGGARRPGVRGQGAAAVGPTGPRPTGA--PPSRRTPPPGPR 214
Query: 753 RSLAGP--------SRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAAN 804
R L P +R P AGAPE PP ++R +PAP + +AR
Sbjct: 215 RPLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTR---------APAPLTLSFSARGLA 265
Query: 805 HAHVNTLAHSHSYKTNYGPR-GSSSFQAPLGGAE 837
A + +H + + + G + +PLG E
Sbjct: 266 WAGESPASHQSERRWQWTRKLGCRCYCSPLGSGE 299
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 47.4 bits (111), Expect = 6e-05
Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 693 DSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPA 752
DSA++ RR RR PR R AR VR + PR G+ P S PP P
Sbjct: 160 DSAQQR-RRPTRR--PRGTRGGARRPGVRGQGAAAVGPTGPRPTGA--PPSRRTPPPGPR 214
Query: 753 RSLAGP--------SRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAAN 804
R L P +R P AGAPE PP ++R +PAP + +AR
Sbjct: 215 RPLRSPHSGSGWTPARPPSPPAGAPEALRPPASTTR---------APAPLTLSFSARGLA 265
Query: 805 HAHVNTLAHSHSYKTNYGPR-GSSSFQAPLGGAE 837
A + +H + + + G + +PLG E
Sbjct: 266 WAGESPASHQSERRWQWTRKLGCRCYCSPLGSGE 299
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 47.4 bits (111), Expect = 6e-05
Identities = 51/198 (25%), Positives = 69/198 (34%), Gaps = 30/198 (15%)
Query: 569 QRPRGAGGRLQDPWPASLAL-AGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGS 627
+R RG G PW L GP A+ + G G+ +G G G G
Sbjct: 150 RRQRGDAG---SPWGCPLCPDRGPAEAQTQAEGQGQG------QGQGQGQGQGQGQGQGQ 200
Query: 628 GEGQGRGPG--SRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGC 685
G+GQGR PG S V S +PS+C A AP R P + P + +
Sbjct: 201 GQGQGRRPGLVSAVLAEASWGSPSACPGAQAAPERLGRGVHDTDPWATPPYCPKIQSPPY 260
Query: 686 SAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRST----TPRGPEASSPRARGSFLP 741
S+ D++ W P W +S+ P P ++P
Sbjct: 261 SSQGTTSDAS--------------LWTPPQGCPWTQSSPEPRNPPVPWTAAPATLELAAV 306
Query: 742 KSGGGSPPRPARSLAGPS 759
G P P SL PS
Sbjct: 307 YQGLSVSPEPCLSLGAPS 324
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 45.8 bits (107), Expect = 2e-04
Identities = 50/172 (29%), Positives = 65/172 (37%), Gaps = 13/172 (7%)
Query: 644 SSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSA 703
+S AP AA PP P SAT+ P+S APP + SA S+ +A
Sbjct: 158 NSPAPQDTTAA---PPTP-SATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 704 RRGGPRSWRPSARASWVRSTT---PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSR 760
P + P+ +S T P P A++P S P PP P+ + PS
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273
Query: 761 DDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAANHAHVNTLA 812
P PE P S P SSPAP A ++ TLA
Sbjct: 274 ASAP----PETTAAPPTPSATTP--APPSSPAPQETTAAPITTPNSSPTTLA 319
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 45.8 bits (107), Expect = 2e-04
Identities = 53/173 (30%), Positives = 70/173 (40%), Gaps = 14/173 (8%)
Query: 589 AGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGS--GEGQGR----GPGSRVSVR 642
AG I R G PR G G G GGAGGGG G+GR G G R +
Sbjct: 67 AGSAILRAGSR--SPRGAGPGAAGPRAAGR-GGAGGGGRCCTRGRGRFPCAGSGGRGARS 123
Query: 643 RSSRAPSSCRAASLAPPR--PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDR 700
R +PS CR++S A R A SPA + + + + AR
Sbjct: 124 RGCHSPSCCRSSSCAWHRWPQLRGREADPRASPALLICIAPRPRPALPAALHIGARATAG 183
Query: 701 RSARRGGPR--SWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRP 751
+A+R P+ S +AR R++ P P P R +P+ GG RP
Sbjct: 184 LAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPR-GGARVERP 235
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 45.8 bits (107), Expect = 2e-04
Identities = 50/172 (29%), Positives = 65/172 (37%), Gaps = 13/172 (7%)
Query: 644 SSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSA 703
+S AP AA PP P SAT+ P+S APP + SA S+ +A
Sbjct: 158 NSPAPQDTTAA---PPTP-SATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 704 RRGGPRSWRPSARASWVRSTT---PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSR 760
P + P+ +S T P P A++P S P PP P+ + PS
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273
Query: 761 DDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAANHAHVNTLA 812
P PE P S P SSPAP A ++ TLA
Sbjct: 274 ASAP----PETTAAPPTPSATTP--APPSSPAPQETTAAPITTPNSSPTTLA 319
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 45.8 bits (107), Expect = 2e-04
Identities = 50/172 (29%), Positives = 65/172 (37%), Gaps = 13/172 (7%)
Query: 644 SSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSA 703
+S AP AA PP P SAT+ P+S APP + SA S+ +A
Sbjct: 158 NSPAPQDTTAA---PPTP-SATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 704 RRGGPRSWRPSARASWVRSTT---PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSR 760
P + P+ +S T P P A++P S P PP P+ + PS
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273
Query: 761 DDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAARAANHAHVNTLA 812
P PE P S P SSPAP A ++ TLA
Sbjct: 274 ASAP----PETTAAPPTPSATTP--APPSSPAPQETTAAPITTPNSSPTTLA 319
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 44.7 bits (104), Expect = 4e-04
Identities = 84/307 (27%), Positives = 107/307 (34%), Gaps = 59/307 (19%)
Query: 533 GVRGGACGPHRGGIRG--GRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLA--- 587
G +G A P + G RG G P A+GP + G G P PA A
Sbjct: 584 GPKGAAGEPGKAGERGVPGPP-----------GAVGPAGKD-GEAGAQGPPGPAGPAGER 631
Query: 588 -LAGPGIARLGCDLDGPRALVEGLHGRHEGGPLG--GAGGGGSGEGQGRGPGSRVSVRRS 644
GP + L GP E G G GA G G+ PG R +
Sbjct: 632 GEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV--QG 689
Query: 645 SRAPSSCRAASLAPPRPASATSAGSPTSP----APPLHMVSTDGCSAAFLVLDSARKGDR 700
P+ R A+ AP + AG+P +P AP L + + +A KGDR
Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGL----PGPKGDR 745
Query: 701 RSARRGGPRSWRPSARASWVRSTT----PRGPEASSPRARGSFLPKSGGG---------- 746
A GP+ S VR T P GP A +P +G P G
Sbjct: 746 GDA---GPKGADGSPGKDGVRGLTGPIGPPGP-AGAPGDKGESGPSGPAGPTGARGAPGD 801
Query: 747 ----SPPRPARSLAGPSRDDEPLA-------GAPEEWPPPGLSSRRAPRFLIKSSPAPGR 795
PP PA P D +P A GA + PPG + P I + APG
Sbjct: 802 RGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGA 861
Query: 796 RALAARA 802
+ A
Sbjct: 862 KGARGSA 868
Score = 37.7 bits (86), Expect = 0.045
Identities = 93/334 (27%), Positives = 114/334 (34%), Gaps = 47/334 (14%)
Query: 483 RAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPH 542
R G RG PG Q GL G T G + G R GL+ G AG +G P
Sbjct: 240 RPGERGPPGPQGAR--GLPG--TAGLPG--MKGHRGFSGLDGAKGDAGPAGPKGEPGSPG 293
Query: 543 RGGIRG-----GRPLERADDRVLLAQALGPV--QRPRGAGGRLQDPWPASLALAGPGI-- 593
G G G P ER A GP + GA G P P A PG
Sbjct: 294 ENGAPGQMGPRGLPGERGRPG-----APGPAGARGNDGATGAAGPPGPTGPA-GPPGFPG 347
Query: 594 ---ARLGCDLDGPRALVEGLHG-RHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPS 649
A+ GPR EG G R E GP G A G +G G + + ++ AP
Sbjct: 348 AVGAKGEAGPQGPRGS-EGPQGVRGEPGPPGPA--GAAGPAGNPGADGQPGAKGANGAPG 404
Query: 650 SCRAASLAPPR-PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGP 708
A R P+ G P P G D+ KG+ GP
Sbjct: 405 IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKG-----DTGAKGEPGPVGVQGP 459
Query: 709 -----RSWRPSARASWVRSTTPRGP-EASSPRARGSFLPKSGGGSPPRPA--RSLAGPSR 760
+ AR + P P E P +RG F G P PA R GP+
Sbjct: 460 PGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRG-FPGADGVAGPKGPAGERGSPGPAG 518
Query: 761 DDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPG 794
G+P E PG + + L S +PG
Sbjct: 519 P----KGSPGEAGRPGEAGLPGAKGLTGSPGSPG 548
Score = 37.4 bits (85), Expect = 0.058
Identities = 135/510 (26%), Positives = 160/510 (31%), Gaps = 105/510 (20%)
Query: 323 APESFGALGPLGVPLQLPAAARCRASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLAT 382
AP S GA G G+P + AA G G G + G G + G +
Sbjct: 717 APGSQGAPGLQGMPGERGAAGLPGPKG----DRGDAGPKGADGSPGKDGVRGLTGPI--- 769
Query: 383 ATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGRRAGQHSPRVQVGLLG 442
G PG A A +G S P G R A G R G+ P G G
Sbjct: 770 -------GPPGPAG-----APGDKGESGPSGPAGPTGARGAPGDR--GEPGPPGPAGFAG 815
Query: 443 GGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELG---- 498
G+D GQ G +G P A G P A G
Sbjct: 816 PPGAD--------------GQPG---------AKGEPGDAGAKGDAGPPGPAGPAGPPGP 852
Query: 499 -GLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRG--GRPLERA 555
G +G G R AGP G GR G G A P G G G R
Sbjct: 853 IGNVGA-PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRG 911
Query: 556 DDRVLLAQALGPVQRPRGAGGRLQDPWPA----SLALAGPGIARLGCDLDGPRAL----- 606
+ GP RP G G P PA S GP A GP+ +
Sbjct: 912 ET--------GPAGRP-GEVGPPGPPGPAGEKGSPGADGPAGAP---GTPGPQGIAGQRG 959
Query: 607 VEGLHGRHEG-------GPLGGAGGGG-SGEGQGRGPGSRVSVRRSSRAPSSCRAASLAP 658
V GL G+ GP G G G SG RGP + + P AP
Sbjct: 960 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREG-AP 1018
Query: 659 PRPASATSAGSP--------TSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRS 710
S GSP T PA P G V + + GDR GP
Sbjct: 1019 GAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP--VGPAGKSGDRGETGPAGP-- 1074
Query: 711 WRPSARASWVRSTTPRGPEASSPRARGSFLPKSG--GGSPPRPARSLAGPSRDDEPLAGA 768
+ V + P GP+ PR + G G R L GP G+
Sbjct: 1075 ---AGPVGPVGARGPAGPQG--PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPP----GS 1125
Query: 769 PEEWPPPGLSSRRAPRFLIKSSPAPGRRAL 798
P E P G S PR S+ APG+ L
Sbjct: 1126 PGEQGPSGASGPAGPRGPPGSAGAPGKDGL 1155
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 44.7 bits (104), Expect = 4e-04
Identities = 124/472 (26%), Positives = 157/472 (33%), Gaps = 110/472 (23%)
Query: 368 GFHGAQTSKGALLATATRAHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSDR-----P 422
GF G KG A + +G+PG+ G P+G R +R P
Sbjct: 267 GFDGRNGEKGETGAPGLKGE-NGLPGE-----------NGAPGPMGPRGAPGERGRPGLP 314
Query: 423 AAGGRRA--------GQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQ 474
A G R GQ P G G GS G G +
Sbjct: 315 GAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP--------------GAKGEVGPAGSPG 360
Query: 475 LEGFPFMLRAGGRGAPGLQ----AEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRH- 529
G P G RG PG Q A+ G G G G+ GP G L+G
Sbjct: 361 SNGAP-----GQRGEPGPQGHAGAQGPPGPPGIN-GSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 530 ----VGA----GVRGGACGPHRGGIRG--GRPLERADDRVLLAQALGPVQRPRGAGGRLQ 579
GA G+RGGA P + G +G G ER + + V +G G+
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGE------AGIPGVPGAKGEDGKDG 468
Query: 580 DPW-PASLALAGPGIARLGCDLDGPRALVEGLHG-------RHEGGPLG--GAGGGGSGE 629
P P + L G R GP A G+ G R GP G GA G +
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGP-AGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRD 527
Query: 630 GQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAF 689
G GPG R + S P S P P S +G P P P S
Sbjct: 528 GVPGGPGMR-GMPGSPGGPGS----DGKPGPPGSQGESGRPGPPGP-----SGPRGQPGV 577
Query: 690 LVLDSARKGD---RRSARRGGPRSWRPSARASWVRSTTPRGP-----------EASSPRA 735
+ + D ++ RGGP P T P+GP + P
Sbjct: 578 MGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGP 637
Query: 736 RG-SFLPKSGG-----GSP--PRPARSLAGP-SRDDEPLAGAPEEWPPPGLS 778
+G LP +GG G P P P P + + AGAP E PPGL+
Sbjct: 638 QGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLA 689
Score = 37.7 bits (86), Expect = 0.045
Identities = 79/307 (25%), Positives = 99/307 (32%), Gaps = 63/307 (20%)
Query: 485 GGRGAPGLQAEE-LGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHR 543
G +G+PG Q G LG G R LAGP G+ G GV+G + P
Sbjct: 930 GEKGSPGAQGPPGAPGPLGI-AGITGARGLAGPP---GMPGPRGSPGPQGVKGESGKPGA 985
Query: 544 GGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCD--LD 601
G+ G R GP P P L PG+A + D
Sbjct: 986 NGLSGER---------------GP-------------PGPQGL----PGLAGTAGEPGRD 1013
Query: 602 GPRALVEGLHGRHEGGPLG-------GAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAA 654
G +GL GR +G P G G+ G G PG +S S A
Sbjct: 1014 GNPGS-DGLPGR-DGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAG 1071
Query: 655 SLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRR-SARRGGPRSWRP 713
P PA + A P P G + KG R G P S P
Sbjct: 1072 PAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGI--------KGHRGFPGNPGAPGSPGP 1123
Query: 714 SARASWVRSTTPRGPEA----SSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAP 769
+ + + S P GP S P + G PP P + R E G P
Sbjct: 1124 AGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRG--ERGSEGSPGHP 1181
Query: 770 EEWPPPG 776
+ PPG
Sbjct: 1182 GQPGPPG 1188
Score = 37.0 bits (84), Expect = 0.076
Identities = 99/377 (26%), Positives = 128/377 (33%), Gaps = 77/377 (20%)
Query: 485 GGRGAPGLQ-AEELGGLLGCRTGWAAGRTLAGP------RVRLGLEQLLGRHVGAGVRG- 536
G RG PGL A L G G G G+ AGP GL+ + G G G G
Sbjct: 681 GERGPPGLAGAPGLRGGAG-PPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGP 739
Query: 537 ----------GACG-PHRGGIRG-----------GRPLERADDRVLLAQALGPVQRPRGA 574
GA G P + G RG G+P ++ + A L + PRG+
Sbjct: 740 KGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGG---APGLPGIAGPRGS 796
Query: 575 GGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHG-RHEGGPLGGAG-GGGSGEGQG 632
G + P A PG + G G G + EGGP G AG GGSG
Sbjct: 797 PGERGETGPPGPA-GFPGAPGQNGEPGGKGE--RGAPGEKGEGGPPGVAGPPGGSGPAGP 853
Query: 633 RGPGSRVSVRRSSRAPSSC-------------RAASLAPPRPASATSAGSPTSPAPPLHM 679
GP R S P + + PP P+ + P PA
Sbjct: 854 PGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGA 913
Query: 680 VSTDGCSAAFLVLDSARKGDRRS-ARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGS 738
+ G S D+ + G++ S +G P + P A + GP P RGS
Sbjct: 914 PGSPGVSGP--KGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGP-PGMPGPRGS 970
Query: 739 FLPK--------------SGGGSPPRP------ARSLAGPSRDDEPLA-GAPEEWPPPGL 777
P+ SG PP P A + P RD P + G P PG
Sbjct: 971 PGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGG 1030
Query: 778 SSRRAPRFLIKSSPAPG 794
R + APG
Sbjct: 1031 KGDRGENGSPGAPGAPG 1047
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 44.7 bits (104), Expect = 4e-04
Identities = 121/489 (24%), Positives = 155/489 (31%), Gaps = 120/489 (24%)
Query: 328 GALGPLGV-----PLQLPA-----AARCRASGVWETGLGSGGTRR-----GGRRLGFHGA 372
G PLG P++L A A A+GV G G RR GG++ G
Sbjct: 17 GPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRG- 75
Query: 373 QTSKGALLATATRAHGHGVPG------------KAATVLYKALHGRGLSRPVGRRVHVSD 420
KGA+ R H G KAA K+L GRG R RR
Sbjct: 76 --QKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRG--RKPRRR---GQ 128
Query: 421 RPAAGGRRAGQHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHL-----------RG 469
+ AA G + + R Q G + G AA ++ Q G R
Sbjct: 129 KAAATGSKKPRW--RAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRS 186
Query: 470 GEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCR----------TGWAAGRTLAGPRVR 519
G+ + G +G G G R G A R G + +
Sbjct: 187 GKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQ 246
Query: 520 LGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQA-------LGPVQRPR 572
++ G+ G + G RGG G + L R LA A G +
Sbjct: 247 K--QRRRGQKAATGGKSRV-GKSRGG--GDKKLRRQGQNAALAGAKRRGAATAGEKPAAK 301
Query: 573 GAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQG 632
G GGR P SL P R G + G GGGG +
Sbjct: 302 GRGGR----GPKSLGGQNPRWGR-----GGKKPRRRGQKATKAAAAGTKRGGGGQQKAAV 352
Query: 633 RGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVL 692
G SR RR + P +A++ A A S G
Sbjct: 353 VGVKSRKKQRRRGKKPRRQKASA------AGAKSRGG----------------------- 383
Query: 693 DSARKGDRRSARRGG----PRSWRPSARASWVRSTTPRGPEASSPRARGSFLPK------ 742
+KG R + RRG PR P RA + PRG + PR RG K
Sbjct: 384 -GDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKS 442
Query: 743 -SGGGSPPR 750
SGGG PR
Sbjct: 443 RSGGGKKPR 451
Score = 38.1 bits (87), Expect = 0.034
Identities = 117/571 (20%), Positives = 175/571 (30%), Gaps = 107/571 (18%)
Query: 210 RGPGGKPRRSCTAIRVEGGNPPVPEAEERNPERGTAMPAQTPAGPSVRRDSRAARHGEKR 269
RG G + + ++ +GG P++ A A++ +G RR +R E
Sbjct: 153 RGAGAQKAAAAAGVKSQGGE---------KPQKAAAAGAKSRSGKKPRRRGAKSRGDE-- 201
Query: 270 VDEGAWTRASRATWTSNINAAQRPSPSPGPMVGHCNAHRRVSHFCLTLGTRALAPESFGA 329
D+ R +++ + ++ P P G + R
Sbjct: 202 -DKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRG-------------------- 240
Query: 330 LGPLGVPLQLPAAARCRASGVWETGLGSGG----TRRGGRRLGFHGAQTSKGALLATATR 385
G Q + G G GG RR G+ GA+ A
Sbjct: 241 -GGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPA 299
Query: 386 AHGHGVPGKAATVLYKALHGRGLSRPVGRRVHVSDRPAAGGRRAG--------------- 430
A G G G + GRG +P R + AAG +R G
Sbjct: 300 AKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRK 359
Query: 431 -----QHSPRVQVGLLGGGGSDHGGLLFGAAVVVLRG--------QHGHLRGGEVAQLE- 476
PR Q G S GG G RG Q+ R + +
Sbjct: 360 KQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKP 419
Query: 477 ---GFPFMLRAGGRGAP--GLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRH-- 529
G R G + A G ++ GG R G A + A ++ GR
Sbjct: 420 RGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKA 479
Query: 530 --VGAGVRGGACGPHRGG--IRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPAS 585
G RGG H G R G+ E A ++ A A G R R R +
Sbjct: 480 SAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEK---ATAAGAKSRGRKQPRRQK------ 530
Query: 586 LALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSS 645
P +A + G ++ R + G GG G Q RG G R+
Sbjct: 531 -----PAVAGAKSRVGGSKS-----RQRQKAVAAGATSHGGGGNKQSRGGGGN-KPRQWG 579
Query: 646 RAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAF--LVLDSARKGDRRSA 703
+ ++ + +P +A T S DG A+ + K ++
Sbjct: 580 QTAAAAKTRGGGDKQPGWQKAAAGVTKSR------SGDGGKKAWRQKAAGTGAKSRKKPW 633
Query: 704 RRGGPRSWRPSARASWVRSTTPRGPEASSPR 734
RRG + +A +W T RG PR
Sbjct: 634 RRG--QKDAAAAEKAWATGATSRGSGGKQPR 662
Score = 35.4 bits (80), Expect = 0.22
Identities = 90/369 (24%), Positives = 122/369 (33%), Gaps = 66/369 (17%)
Query: 407 GLSRPVGRRVHVSDRPAAGG---RRAGQHSP-----RVQVGLLGGG---GSDHGGLLFGA 455
G +R R+ H +PAAGG RR G P R Q GG G GG G
Sbjct: 215 GKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGG---GD 271
Query: 456 AVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLLGCRTGWAAGRTLAG 515
+ +GQ+ L G + A GRG G + LGG W GR
Sbjct: 272 KKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRG--PKSLGGQ---NPRW--GRGGKK 324
Query: 516 PRVRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAG 575
PR R Q + AG + G G + + G + ++ QR RG
Sbjct: 325 PRRR---GQKATKAAAAGTKRGGGGQQKAAVVGVKSRKK--------------QRRRGKK 367
Query: 576 GRLQDPWPASLALAGPG-------IARLGCDLDGPRALVEGLHGRHEGGPLGGAGGGGSG 628
R Q A G G R G PR + R + P GGGS
Sbjct: 368 PRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRW--QNPRRRAQKAPAAKPRGGGSK 425
Query: 629 EGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAA 688
+ + RGP + S SR+ + A AG+ + G A
Sbjct: 426 KPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGD------KKQGRQKA 479
Query: 689 FLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSP 748
+R G +S G WR +A EA+ +A + G P
Sbjct: 480 SAAGTKSRGGGLKS--HSGKNLWRRGQKA-----------EAAGEKATAAGAKSRGRKQP 526
Query: 749 PRPARSLAG 757
R ++AG
Sbjct: 527 RRQKPAVAG 535
Score = 33.1 bits (74), Expect = 1.1
Identities = 40/169 (23%), Positives = 59/169 (34%), Gaps = 16/169 (9%)
Query: 338 QLPAAARCRASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATAT---------RAHG 388
Q AAA +A T GSGG + ++ G+++S A + RA
Sbjct: 637 QKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKS 696
Query: 389 HGVPGKAATVLYKALHGRGLSRPVGRR---VHVSDRPAAGGRRAGQHSPRVQVGLLGGGG 445
G G+ A V RG +G+ R + G + G + + G
Sbjct: 697 RGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAAS 756
Query: 446 SDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQA 494
HG G RG R GE A G AGG+ P +++
Sbjct: 757 KSHG----GGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKS 801
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 44.7 bits (104), Expect = 4e-04
Identities = 97/401 (24%), Positives = 133/401 (33%), Gaps = 80/401 (19%)
Query: 207 VPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNPERGTAMPAQTPAGPSVRRDSRAARHG 266
VP P + + C G P A N E + P PA P+ R SR G
Sbjct: 208 VPQPDPSRELKTLCEEEEEGQGRPQQAVASPSNAEDTSPAPVSAPAPPA--RTSRG--QG 263
Query: 267 EKRVDEGAWTRASRATWTSNINAAQRPSPSPGPMVGHCNAHRRVSHFCLTLGTRALAPES 326
+R +E A + R S P A R L G+ AL P
Sbjct: 264 SERANEAGGQVGPEAPRPPETSPEMRSSRQPAQDTAPTPAPR------LRKGSDALRP-- 315
Query: 327 FGALGPLGVPLQLPAAARCRASGVWETGLGSGGTRRGGRRLGFHGAQTSKGALLATATRA 386
P+ +ASG GLGS +T A T A
Sbjct: 316 ---------PVPQGEDEVPKASGAPPAGLGS-------------ARETQAQACPQEGTEA 353
Query: 387 HGHGVPGKAATVLYKALHGRGLSRPVGRR------VHVSDRPAAGG-----RRAGQHSPR 435
HG L ++ +G P GR+ + DRP A G R G+ +
Sbjct: 354 HG--------ARLGPSIEDKGSGDPFGRQRLKAEEMDTEDRPEASGVDTEPRSGGREANT 405
Query: 436 VQVGLLGGGGSDHGGLLFGAAVVVLRGQHGHLRGGEV------AQLEGFPFMLRAGGRGA 489
+ G+ G + + A + +H +G E A+ G P G +G
Sbjct: 406 KRSGVRAGEAEESSAVCQVDAEQRSKVRHVDTKGPEATGVMPEARCRGTPEAPPRGSQGR 465
Query: 490 PGLQA-EELGGLLGCRTGWAAGRT-----LAGPRVRLGLEQLLGRHVGAGVRGGACGPHR 543
G++ +E L AG + L G R G E+ GA VRGGA G
Sbjct: 466 LGVRTRDEAPSGLSLPPAEPAGHSGQLGDLEGARAAAGQER-----EGAEVRGGAPGIEG 520
Query: 544 GGIRGG--------RPLERADDRVLLAQALGPVQRPRGAGG 576
G+ G RP + LL+ A G + RG GG
Sbjct: 521 TGLEQGPSVGAISTRPQVSSWQGALLSTAQGAIS--RGLGG 559
Score = 32.0 bits (71), Expect = 2.4
Identities = 40/152 (26%), Positives = 52/152 (34%), Gaps = 33/152 (21%)
Query: 655 SLAPPRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPS 714
++A P A TS ++PAPP S +G R+ GG
Sbjct: 234 AVASPSNAEDTSPAPVSAPAPPAR--------------TSRGQGSERANEAGGQ------ 273
Query: 715 ARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRP-----ARSLAGPSRDDEPLAGAP 769
V PR PE +SP R S P P P + +L P E
Sbjct: 274 -----VGPEAPRPPE-TSPEMRSSRQPAQDTAPTPAPRLRKGSDALRPPVPQGEDEVPKA 327
Query: 770 EEWPPPGLSSRRAPRFLIKSSPAPGRRALAAR 801
PP GL S R + ++ P G A AR
Sbjct: 328 SGAPPAGLGSARETQ--AQACPQEGTEAHGAR 357
Score = 32.0 bits (71), Expect = 2.4
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 186 PEQPFLPVSGPVVHTVLICSAVPCRGPGGKPRRSCTAIRVEGGNPPVPEAEERNPERGTA 245
PE P P + P + + + P + R+ A+R PPVP+ E+ P+ A
Sbjct: 276 PEAPRPPETSPEMRSSRQPAQDTAPTPAPRLRKGSDALR-----PPVPQGEDEVPKASGA 330
Query: 246 MPA--------QTPAGPSVRRDSRAARHGEKRVDEGA 274
PA Q A P ++ AR G D+G+
Sbjct: 331 PPAGLGSARETQAQACPQEGTEAHGARLGPSIEDKGS 367
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 43.9 bits (102), Expect = 6e-04
Identities = 61/213 (28%), Positives = 72/213 (33%), Gaps = 39/213 (18%)
Query: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQ-------------------GRGPGS-RVSVR 642
PRAL GG G G+GEG G G S R+SV
Sbjct: 275 PRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVG 334
Query: 643 RSSRA-PSSCRAASLAPPRPASATS---------AGSPTSPAPPLHMVSTDGC-SAAFLV 691
R RA P + A S P P + AG S PP DGC SAA +
Sbjct: 335 RGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRL 394
Query: 692 LDSARKGDRRSARRGGPRSWRPSARASWVRSTTPR--GPEASSPRARGSFLPKSGGGSPP 749
+ R G R S R TP P SSPR G P++GG S
Sbjct: 395 SPALPAPSPREVTLGSHVPARVSRRPC---PPTPAELNPATSSPRPLGPLRPRAGGQSSG 451
Query: 750 RPARSLAGP---SRDDEPLAGAPEEWPPPGLSS 779
P R++ P P A P P L +
Sbjct: 452 HPDRTVTSPRPIPARPRPRTSASRPGPSPHLEA 484
Score = 30.0 bits (66), Expect = 9.3
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 17/123 (13%)
Query: 659 PRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDS-ARKGDRRSARRGGPRSWRP---S 714
P PAS S+ P H T G ++L S + +G R+A G +W P +
Sbjct: 6 PDPASVNSSHLKAGLVPQSH---TPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPA 62
Query: 715 ARASWVRSTTPRGPEASSPRARGSFLPKSGGG----------SPPRPARSLAGPSRDDEP 764
A R+ G S R + S KS G PPRP + +R P
Sbjct: 63 AALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRP 122
Query: 765 LAG 767
AG
Sbjct: 123 TAG 125
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 43.9 bits (102), Expect = 6e-04
Identities = 61/213 (28%), Positives = 72/213 (33%), Gaps = 39/213 (18%)
Query: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQ-------------------GRGPGS-RVSVR 642
PRAL GG G G+GEG G G S R+SV
Sbjct: 275 PRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVG 334
Query: 643 RSSRA-PSSCRAASLAPPRPASATS---------AGSPTSPAPPLHMVSTDGC-SAAFLV 691
R RA P + A S P P + AG S PP DGC SAA +
Sbjct: 335 RGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRL 394
Query: 692 LDSARKGDRRSARRGGPRSWRPSARASWVRSTTPR--GPEASSPRARGSFLPKSGGGSPP 749
+ R G R S R TP P SSPR G P++GG S
Sbjct: 395 SPALPAPSPREVTLGSHVPARVSRRPC---PPTPAELNPATSSPRPLGPLRPRAGGQSSG 451
Query: 750 RPARSLAGP---SRDDEPLAGAPEEWPPPGLSS 779
P R++ P P A P P L +
Sbjct: 452 HPDRTVTSPRPIPARPRPRTSASRPGPSPHLEA 484
Score = 30.0 bits (66), Expect = 9.3
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 17/123 (13%)
Query: 659 PRPASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDS-ARKGDRRSARRGGPRSWRP---S 714
P PAS S+ P H T G ++L S + +G R+A G +W P +
Sbjct: 6 PDPASVNSSHLKAGLVPQSH---TPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPA 62
Query: 715 ARASWVRSTTPRGPEASSPRARGSFLPKSGGG----------SPPRPARSLAGPSRDDEP 764
A R+ G S R + S KS G PPRP + +R P
Sbjct: 63 AALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRP 122
Query: 765 LAG 767
AG
Sbjct: 123 TAG 125
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 43.9 bits (102), Expect = 6e-04
Identities = 61/213 (28%), Positives = 72/213 (33%), Gaps = 39/213 (18%)
Query: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQ-------------------GRGPGS-RVSVR 642
PRAL GG G G+GEG G G S R+SV
Sbjct: 312 PRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVG 371
Query: 643 RSSRA-PSSCRAASLAPPRPASATS---------AGSPTSPAPPLHMVSTDGC-SAAFLV 691
R RA P + A S P P + AG S PP DGC SAA +
Sbjct: 372 RGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRL 431
Query: 692 LDSARKGDRRSARRGGPRSWRPSARASWVRSTTPR--GPEASSPRARGSFLPKSGGGSPP 749
+ R G R S R TP P SSPR G P++GG S
Sbjct: 432 SPALPAPSPREVTLGSHVPARVSRRPC---PPTPAELNPATSSPRPLGPLRPRAGGQSSG 488
Query: 750 RPARSLAGP---SRDDEPLAGAPEEWPPPGLSS 779
P R++ P P A P P L +
Sbjct: 489 HPDRTVTSPRPIPARPRPRTSASRPGPSPHLEA 521
Score = 30.4 bits (67), Expect = 7.1
Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 21/151 (13%)
Query: 635 PGSRVSVRRS--SRAPSSC-RAASLAP-PRPASATSAGSPTSPAPPLHMVSTDGCSAAFL 690
PG + ++++ S +PS R +P P PAS S+ P H T G +
Sbjct: 15 PGDKWTLKKKLDSLSPSHIVRDEMTSPDPDPASVNSSHLKAGLVPQSH---TPGRLVLAV 71
Query: 691 VLDS-ARKGDRRSARRGGPRSWRP---SARASWVRSTTPRGPEASSPRARGSFLPKSGGG 746
+L S + +G R+A G +W P +A R+ G S R + S KS G
Sbjct: 72 LLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRG 131
Query: 747 ----------SPPRPARSLAGPSRDDEPLAG 767
PPRP + +R P AG
Sbjct: 132 KVLLEGTGKEVPPRPLPAARAAARYPRPTAG 162
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 43.9 bits (102), Expect = 6e-04
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 9/165 (5%)
Query: 613 RHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTS 672
R + G GGA GG+ RGPGS R S+ S P R ++ GSP S
Sbjct: 59 REQAGARGGAEAGGAASDGSRGPGSPAGRGRPEATASATLVRSPGPRRSSAWAEGGSPRS 118
Query: 673 PAPPL--HMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEA 730
L + + G A L S + ++ A A+ R PR +
Sbjct: 119 TRSLLGDPRLRSPGSKGAESRLRSPVRAKPIPGQKTSEADDAAGAAAAAAR-PAPREAQV 177
Query: 731 SSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPP 775
SS R S G+ L D+ PLA + E PPP
Sbjct: 178 SSVRI------VSASGTVSEEIEVLEMVKEDEAPLALSDAEQPPP 216
Score = 31.2 bits (69), Expect = 4.2
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 12/110 (10%)
Query: 696 RKGDRRSA-RRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPPRPARS 754
R G R A RGG A A S RGP + + R R + P P RS
Sbjct: 55 RSGSREQAGARGG-------AEAGGAASDGSRGPGSPAGRGRPEATASATLVRSPGPRRS 107
Query: 755 LA----GPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSPAPGRRALAA 800
A G R L G P P + R +++ P PG++ A
Sbjct: 108 SAWAEGGSPRSTRSLLGDPRLRSPGSKGAESRLRSPVRAKPIPGQKTSEA 157
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 43.9 bits (102), Expect = 6e-04
Identities = 72/251 (28%), Positives = 84/251 (33%), Gaps = 23/251 (9%)
Query: 567 PVQRPRGAGGRLQDPW--PASLALA-GPGIARLGCDLDGPRALVEGLHGRHEGGPLGGAG 623
P + P GA P PA+ A A GP + RL + + P A E PL G G
Sbjct: 1016 PAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPG 1075
Query: 624 GGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPTSPAPPLHMVSTD 683
GG+G G G G + AP CRAA PP P SP+ S
Sbjct: 1076 AGGAGGTGGAGGG-------APAAPPPCRAA--PPPCP----YLDLEPSPSDSEDSESLG 1122
Query: 684 GCSAAFLVLDSARKGDRRSARRGGP---RSWRPSARASWVRSTTPRGPEASSPRARGSFL 740
G S L A R GP R W W + P S P A
Sbjct: 1123 GASLGGLEPWWFADFPYPYAERLGPPPGRYWSVDKLGGWRAGSWDYLPPRSGPAAWHCRH 1182
Query: 741 PKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPRFLIKSSP----APGRR 796
S PP S + D A P W L RRA +S P A R
Sbjct: 1183 CASLELLPPPRHLSCSHDGLDGGWWAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRT 1242
Query: 797 ALAARAANHAH 807
AA +H H
Sbjct: 1243 PAAAAPHHHRH 1253
Score = 30.0 bits (66), Expect = 9.3
Identities = 32/102 (31%), Positives = 35/102 (34%), Gaps = 23/102 (22%)
Query: 700 RRSARRGGPRSWRPSARASWVRSTTPRGPEASSPRARGSFLPKSGGGSPP---------- 749
RR AR G PRS RAS R P A++P G PP
Sbjct: 1221 RRRARCGCPRSHPHRPRASH------RTPAAAAPHHHRHRRAAGGWDLPPPAPTSRSLED 1274
Query: 750 -------RPARSLAGPSRDDEPLAGAPEEWPPPGLSSRRAPR 784
PAR L GPSR A PP +S R R
Sbjct: 1275 LSSCPRAAPARRLTGPSRHARRCPHAAHWGPPLPTASHRRHR 1316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,717,637
Number of Sequences: 37866
Number of extensions: 2955852
Number of successful extensions: 24690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 1107
Number of HSP's that attempted gapping in prelim test: 17320
Number of HSP's gapped (non-prelim): 6478
length of query: 837
length of database: 18,247,518
effective HSP length: 111
effective length of query: 726
effective length of database: 14,044,392
effective search space: 10196228592
effective search space used: 10196228592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.