BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239742968 PREDICTED: hypothetical protein XP_002342707 [Homo sapiens] (106 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754418 PREDICTED: hypothetical protein [Homo sapiens] 224 2e-59 gi|239748946 PREDICTED: hypothetical protein XP_002346864 [Homo ... 224 2e-59 gi|239742968 PREDICTED: hypothetical protein XP_002342707 [Homo ... 224 2e-59 gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo... 37 0.003 gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 37 0.004 gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.010 gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.010 gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 35 0.013 gi|14249338 BUD13 homolog isoform 1 [Homo sapiens] 34 0.022 gi|112421108 capicua homolog [Homo sapiens] 34 0.022 gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 34 0.029 gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 34 0.029 gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ... 34 0.029 gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ... 34 0.029 gi|19924099 synapsin I isoform Ia [Homo sapiens] 34 0.029 gi|19924097 synapsin I isoform Ib [Homo sapiens] 34 0.029 gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 33 0.038 gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 33 0.038 gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 33 0.038 gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 33 0.038 gi|169160624 PREDICTED: hypothetical protein [Homo sapiens] 33 0.038 gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 33 0.050 gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 33 0.050 gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sap... 33 0.065 gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sa... 33 0.065 gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.065 gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.065 gi|7710121 engrailed homeobox 2 [Homo sapiens] 33 0.065 gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 33 0.065 gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 33 0.065 >gi|239754418 PREDICTED: hypothetical protein [Homo sapiens] Length = 106 Score = 224 bits (570), Expect = 2e-59 Identities = 106/106 (100%), Positives = 106/106 (100%) Query: 1 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG Sbjct: 1 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 Query: 61 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS Sbjct: 61 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 >gi|239748946 PREDICTED: hypothetical protein XP_002346864 [Homo sapiens] Length = 106 Score = 224 bits (570), Expect = 2e-59 Identities = 106/106 (100%), Positives = 106/106 (100%) Query: 1 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG Sbjct: 1 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 Query: 61 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS Sbjct: 61 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 >gi|239742968 PREDICTED: hypothetical protein XP_002342707 [Homo sapiens] Length = 106 Score = 224 bits (570), Expect = 2e-59 Identities = 106/106 (100%), Positives = 106/106 (100%) Query: 1 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG Sbjct: 1 MAEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 Query: 61 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS Sbjct: 61 CAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 >gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo sapiens] Length = 367 Score = 37.0 bits (84), Expect = 0.003 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 6 VPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 VPVPT PA + C P +GG A Q + G G+ PP P P +P GG Sbjct: 123 VPVPTVPAAAATCEPP----SGGSAAAQPPGSGG-GKPPPPPPPAPQVAPPVPGG 172 >gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] Length = 1858 Score = 36.6 bits (83), Expect = 0.004 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 25 AAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCA--PEPAPLTGALSG 77 A+ G AL S A P PP P P P+ + CA A PEPAP+ +G Sbjct: 1554 ASPGLALFNGSGRASPPSTPPPPPPPPGPPPAPYRPCAHLAFPPEPAPVNAGKAG 1608 Score = 25.8 bits (55), Expect = 7.9 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 7 PVPTAPARSGGCT-LPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSP 55 P P + +G C+ P + + +A R D+ AG PP P +S P Sbjct: 1618 PKPNSAPVAGPCSSFPKIPYSPVKATRADARKAGSSASPPAPYSPPSSRP 1667 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 35.4 bits (80), Expect = 0.010 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAP 66 P APA PP A A A P P +P P +++GG A AP Sbjct: 258 PAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAA----AQNGGSAGAAP 313 Query: 67 EPAPLTGALSG 77 PAP G +G Sbjct: 314 APAPAAGGPAG 324 Score = 30.8 bits (68), Expect = 0.25 Identities = 31/75 (41%), Positives = 32/75 (42%), Gaps = 9/75 (12%) Query: 6 VPVPTAPARSG--GCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNS-SPSRHGGCA 62 VP P A G G P AAGG A S GPG P PG + SP R Sbjct: 297 VPPPAAAQNGGSAGAAPAPAPAAGGPA--GVSGQPGPGAAAAAPAPGVKAESPKR---VV 351 Query: 63 QCAPEPAPLTGALSG 77 Q AP PA T A SG Sbjct: 352 QAAP-PAAQTLAASG 365 Score = 28.1 bits (61), Expect = 1.6 Identities = 28/94 (29%), Positives = 33/94 (35%), Gaps = 9/94 (9%) Query: 9 PTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEP 68 P P + PP A G SA A P P P GG + S G A P Sbjct: 287 PAGPPTAAPAVPPPAAAQNG-----GSAGAAPA---PAPAAGGPAGVSGQPGPGAAAAAP 338 Query: 69 APLTGALS-GRLHVAFPEGYHKINRDTPSPQGAS 101 AP A S R+ A P + P+ AS Sbjct: 339 APGVKAESPKRVVQAAPPAAQTLAASGPASTAAS 372 Score = 26.2 bits (56), Expect = 6.1 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 8/69 (11%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQ-----RPPLPKPGGNSSPSRHGGC 61 P P AR GG G + R+ AGP RPP G+ +P Sbjct: 89 PPPAGRARPGGGGPQ---RPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAA 145 Query: 62 AQCAPEPAP 70 PEPAP Sbjct: 146 VAAGPEPAP 154 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 35.4 bits (80), Expect = 0.010 Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 31/110 (28%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPG-------------GNS 53 P T P+ GG PP A P PP PK G + Sbjct: 1152 PAATPPSPKGGLATPP----------PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1201 Query: 54 SPSRHGGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASET 103 PS GG A +P+ AP T A + P+G TPSP+GA T Sbjct: 1202 PPSPKGGLATPSPKGAPTTPAAT----PPSPKG----GLATPSPKGAPTT 1243 Score = 34.3 bits (77), Expect = 0.022 Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 10/98 (10%) Query: 7 PVPTAPARSGGCTLP-PLLAAGGRALRQDSAAAGPGQRPP--LPKPGGNSSPSRHGGCAQ 63 P T P+ GG P P A A S GP P P P + PS GG A Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPAT 1002 Query: 64 CAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGAS 101 +P+ AP A++ P TP P+GAS Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAA-------TPFPKGAS 1033 Score = 32.3 bits (72), Expect = 0.085 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Query: 9 PTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEP 68 PT PA + PP G A P PP PK GG ++P G A P Sbjct: 1218 PTTPAAT-----PPSPKGGLATPSPKGAPTTPAATPPSPK-GGPATPPPKGAPTPPAATP 1271 Query: 69 APLTGALSGRLHVAFPEGYHKINRDTPSPQGASET 103 L G L+ H P + PSP+G T Sbjct: 1272 PSLKGGLATPPHKGAP---NPAVVTPPSPKGGPAT 1303 Score = 30.8 bits (68), Expect = 0.25 Identities = 38/129 (29%), Positives = 44/129 (34%), Gaps = 32/129 (24%) Query: 7 PVPTAPARSGGCTLPPLLAA------------GGRALRQDSAAA-GPGQRPPLPKPG--- 50 P T P+ GG P L A GG A A P PP PK G Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT 1119 Query: 51 ----------GNSSPSRHGGCAQCAPEPAPLTGALS-----GRLHVAFPEGYHKINRDT- 94 + PS GG A P+ AP T A + G L P+G T Sbjct: 1120 PPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP 1179 Query: 95 PSPQGASET 103 PSP+G T Sbjct: 1180 PSPKGGLAT 1188 Score = 29.6 bits (65), Expect = 0.55 Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 13/77 (16%) Query: 7 PVPTAPARSGGCTLPPLLAA------------GGRALRQDSAAAGPGQ-RPPLPKPGGNS 53 P T P+ GG PP A GG A A P PP PK G + Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303 Query: 54 SPSRHGGCAQCAPEPAP 70 SP + A P+P Sbjct: 1304 SPPKGAPTPPAATPPSP 1320 Score = 28.9 bits (63), Expect = 0.94 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 14/103 (13%) Query: 4 VNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGG------NSSPSR 57 VN+P P + P L+ + ++ A P P P P G + PS Sbjct: 891 VNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSP 950 Query: 58 HGGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGA 100 GG A +P+ AP A + P+G TPSP+GA Sbjct: 951 KGGPATPSPKWAPTPPAAT----PPSPKG----GPATPSPKGA 985 Score = 28.1 bits (61), Expect = 1.6 Identities = 32/113 (28%), Positives = 38/113 (33%), Gaps = 27/113 (23%) Query: 7 PVPTAPARSGGCTLPPLLAA------------GGRALRQDSAA-AGPGQRPPLPKPGGNS 53 P T P+ GG PP A GG A A P PP PK G Sbjct: 1267 PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK-GSPG 1325 Query: 54 SPSRHGGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 +P G AP P +T P+G + TPS +G T S Sbjct: 1326 TPPPKG-----APTPPAVT--------PPSPKGTPTLPATTPSSKGGPTTPSS 1365 Score = 26.9 bits (58), Expect = 3.6 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 7/66 (10%) Query: 9 PTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG-CAQCAPE 67 PT PA + PP G A P PP PK GG ++PS G A Sbjct: 1195 PTTPAAT-----PPSPKGGLATPSPKGAPTTPAATPPSPK-GGLATPSPKGAPTTPAATP 1248 Query: 68 PAPLTG 73 P+P G Sbjct: 1249 PSPKGG 1254 Score = 26.2 bits (56), Expect = 6.1 Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 9/96 (9%) Query: 9 PTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEP 68 PT PA + PP G A P PP PK ++P G A P Sbjct: 986 PTPPAAT-----PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATP 1040 Query: 69 APLTGALSGRLHVAFPEGYHKINRDT-PSPQGASET 103 G+ + P+G T PSP+G T Sbjct: 1041 PSPKGSPAA---TPLPKGAPTTPAATLPSPKGGPAT 1073 >gi|4826998 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Homo sapiens] Length = 707 Score = 35.0 bits (79), Expect = 0.013 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 26/104 (25%) Query: 8 VPTAPARSGGCTLPPLLAAG-GRALRQDSAAAGP-----------GQRPPLPKPGGNSSP 55 VPT P ++GG PP G G +Q GP G P L PGG+ P Sbjct: 174 VPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKP 233 Query: 56 SRHGGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQG 99 GG EP GR H YH+ + P P G Sbjct: 234 PHRGG-----GEPR------GGRQH---HPPYHQQHHQGPPPGG 263 >gi|14249338 BUD13 homolog isoform 1 [Homo sapiens] Length = 619 Score = 34.3 bits (77), Expect = 0.022 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 15/108 (13%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRP--------PLPKPGGNSSPSRH 58 P P AR T PP R +R DS+ P +R P +P NSS + Sbjct: 162 PSPLRGARHDSDTSPP------RRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGASP 215 Query: 59 GGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTP-SPQGASETRR 105 +P+P+P A G ++ P H + DT G+S+T++ Sbjct: 216 RRVRHDSPDPSPPRRARHGSSDISSPRRVHNNSPDTSRRTLGSSDTQQ 263 >gi|112421108 capicua homolog [Homo sapiens] Length = 1608 Score = 34.3 bits (77), Expect = 0.022 Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 2 AEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQR-PPLPKP--GGNSSPSRH 58 AE +PVP P + P AGG S+ +G Q PPLP P G P Sbjct: 1531 AEAPLPVPP-PTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWE 1589 Query: 59 GGCAQCAPEPAPLTGA 74 G P P P T A Sbjct: 1590 GAPQPSPPPPGPSTAA 1605 Score = 25.8 bits (55), Expect = 7.9 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 10 TAPARSGGCTLPPLLAAGGRALRQDS---AAAGPGQRPPLPKPGGNSSPSR 57 ++PA S G Q+S + AGP RPP P GG ++PS+ Sbjct: 537 SSPASSSASAATSFSLGSGTFKAQESGQGSTAGP-LRPPPPGAGGPATPSK 586 >gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo sapiens] Length = 649 Score = 33.9 bits (76), Expect = 0.029 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 14/89 (15%) Query: 8 VPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQC--- 64 +P+A RSG L L +R AAGP +RP LP G P H C + Sbjct: 530 IPSAGERSGHKNLA-LEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 588 Query: 65 ---APEPAPLTGA-------LSGRLHVAF 83 AP APL + +SGR + F Sbjct: 589 LYGAPSQAPLPHSRSFTAPPVSGRYYADF 617 >gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo sapiens] Length = 661 Score = 33.9 bits (76), Expect = 0.029 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 14/89 (15%) Query: 8 VPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQC--- 64 +P+A RSG L L +R AAGP +RP LP G P H C + Sbjct: 542 IPSAGERSGHKNLA-LEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 600 Query: 65 ---APEPAPLTGA-------LSGRLHVAF 83 AP APL + +SGR + F Sbjct: 601 LYGAPSQAPLPHSRSFTAPPVSGRYYADF 629 >gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo sapiens] Length = 330 Score = 33.9 bits (76), Expect = 0.029 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPS 56 PVPTAP L L GGRAL + A PG P P P N P+ Sbjct: 246 PVPTAPY------LAVLPERGGRALTTPALARTPGSLAPSPPPSPNPRPA 289 >gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo sapiens] Length = 330 Score = 33.9 bits (76), Expect = 0.029 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPS 56 PVPTAP L L GGRAL + A PG P P P N P+ Sbjct: 246 PVPTAPY------LAVLPERGGRALTTPALARTPGSLAPSPPPSPNPRPA 289 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 33.9 bits (76), Expect = 0.029 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Query: 6 VPVPT-APARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQC 64 +P PT AP + PP G RQ AG PP +P + SP R G Q Sbjct: 508 LPSPTSAPQQPASQAAPPTQGQG----RQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ- 562 Query: 65 APEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 A ++G + A P G + P A TR++ Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQA 604 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 33.9 bits (76), Expect = 0.029 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Query: 6 VPVPT-APARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQC 64 +P PT AP + PP G RQ AG PP +P + SP R G Q Sbjct: 508 LPSPTSAPQQPASQAAPPTQGQG----RQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ- 562 Query: 65 APEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQGASETRRS 106 A ++G + A P G + P A TR++ Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQA 604 >gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sapiens] Length = 630 Score = 33.5 bits (75), Expect = 0.038 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 8 VPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQC--- 64 +P+A RSG L L +R AAGP +RP LP G P H C + Sbjct: 542 IPSAGERSGHKNLA-LEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 600 Query: 65 ---APEPAPL 71 AP APL Sbjct: 601 LYGAPSQAPL 610 >gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo sapiens] Length = 618 Score = 33.5 bits (75), Expect = 0.038 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 8 VPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQC--- 64 +P+A RSG L L +R AAGP +RP LP G P H C + Sbjct: 530 IPSAGERSGHKNLA-LEGLRDWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQA 588 Query: 65 ---APEPAPL 71 AP APL Sbjct: 589 LYGAPSQAPL 598 >gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] Length = 1263 Score = 33.5 bits (75), Expect = 0.038 Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQ---RPPLPKPGGNSSPSRHGGCAQ 63 P P P G C P GG A+ +G PPLP+ G SPS G Sbjct: 606 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPG-GT 664 Query: 64 CAPEPAPLTGA 74 P P PL G+ Sbjct: 665 AIPPPPPLPGS 675 Score = 32.7 bits (73), Expect = 0.065 Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 14/96 (14%) Query: 2 AEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAG--------PGQRPPLPKPGG-- 51 A + VP P+ P+R+ PPL G + A P PP P PGG Sbjct: 559 AAITVP-PSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC 617 Query: 52 -NSSPSRHGGCAQCAPEPAPLTGALSGRLHVAFPEG 86 +S PS GG A P PL+G + PEG Sbjct: 618 ISSPPSLPGGTA--ISPPPPLSGDATIPPPPPLPEG 651 Score = 32.0 bits (71), Expect = 0.11 Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 1/68 (1%) Query: 2 AEVNVPVPTAPARSG-GCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 A + P P P +G PPL G GPG PP P PGG P G Sbjct: 676 ARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 735 Query: 61 CAQCAPEP 68 P P Sbjct: 736 MGMPPPPP 743 >gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] Length = 1272 Score = 33.5 bits (75), Expect = 0.038 Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQ---RPPLPKPGGNSSPSRHGGCAQ 63 P P P G C P GG A+ +G PPLP+ G SPS G Sbjct: 615 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPG-GT 673 Query: 64 CAPEPAPLTGA 74 P P PL G+ Sbjct: 674 AIPPPPPLPGS 684 Score = 32.7 bits (73), Expect = 0.065 Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 14/96 (14%) Query: 2 AEVNVPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAG--------PGQRPPLPKPGG-- 51 A + VP P+ P+R+ PPL G + A P PP P PGG Sbjct: 568 AAITVP-PSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC 626 Query: 52 -NSSPSRHGGCAQCAPEPAPLTGALSGRLHVAFPEG 86 +S PS GG A P PL+G + PEG Sbjct: 627 ISSPPSLPGGTA--ISPPPPLSGDATIPPPPPLPEG 660 Score = 32.0 bits (71), Expect = 0.11 Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 1/68 (1%) Query: 2 AEVNVPVPTAPARSG-GCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 A + P P P +G PPL G GPG PP P PGG P G Sbjct: 685 ARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 744 Query: 61 CAQCAPEP 68 P P Sbjct: 745 MGMPPPPP 752 >gi|169160624 PREDICTED: hypothetical protein [Homo sapiens] Length = 284 Score = 33.5 bits (75), Expect = 0.038 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 35/126 (27%) Query: 11 APARSGGCTLPP--------------LLAAGGRALRQDSAAAG--PGQRP------PLPK 48 APA +GG ++ P A GG AL + A G PG RP PLP Sbjct: 125 APAAAGGVSMGPSPGGKDGGAFIWGGARAGGGEALTRKRARGGAVPGDRPGGGAASPLPA 184 Query: 49 PGGNSSPSRHGGCAQCAPEPAPL---------TGALSGRLHVAFPEGYHKINR-DTPSPQ 98 P S P G +CAP+ A A SG L+ + + H +N+ P+ Sbjct: 185 PLLASRPRPRG---RCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDKHGLNQVHAPAGD 241 Query: 99 GASETR 104 +E R Sbjct: 242 ALTEVR 247 >gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] Length = 502 Score = 33.1 bits (74), Expect = 0.050 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Query: 6 VPVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGP-GQRPPLPKPGGNSSPSRHGGCAQC 64 +P P P+R GG LP GG R P G PP P P G P R G Sbjct: 313 LPPPPPPSR-GGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGP---- 367 Query: 65 APEPAPLTG 73 P P P TG Sbjct: 368 PPPPPPATG 376 Score = 26.9 bits (58), Expect = 3.6 Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 19/69 (27%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAP 66 P P A RSG PP A GP PP P P PS G P Sbjct: 370 PPPPATGRSGPLPPPP------------PGAGGPPMPPPPPPP--PPPPSSGNG-----P 410 Query: 67 EPAPLTGAL 75 P PL AL Sbjct: 411 APPPLPPAL 419 >gi|46409434 hypothetical protein LOC388759 [Homo sapiens] Length = 237 Score = 33.1 bits (74), Expect = 0.050 Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 8 VPTAPARSGGCTLPPLLAAGGRALR-QDSAAAGPGQRP-PLPKPGG-NSSPSRHGGCAQC 64 +P A +RSG TL A+ R+LR Q AGP P P P P G SP G A Sbjct: 100 LPAAASRSGSRTLR--CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPA 157 Query: 65 APEPA 69 AP A Sbjct: 158 APRTA 162 >gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sapiens] Length = 1120 Score = 32.7 bits (73), Expect = 0.065 Identities = 38/119 (31%), Positives = 46/119 (38%), Gaps = 21/119 (17%) Query: 4 VNVPVPTAPARSGGCT--LP-PLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 + +P P A R G + LP P G A + G G PG PS G Sbjct: 214 LGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGS---WAHPGRTRGPSDRGF 270 Query: 61 C----AQCAPEPAPLTGALS---------GRLHVAFPEGYHKINR--DTPSPQGASETR 104 C A+ A E L GALS GR H A P + R DTP P +ET+ Sbjct: 271 CVVSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCPPVYAETK 329 >gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sapiens] Length = 1132 Score = 32.7 bits (73), Expect = 0.065 Identities = 38/119 (31%), Positives = 46/119 (38%), Gaps = 21/119 (17%) Query: 4 VNVPVPTAPARSGGCT--LP-PLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGG 60 + +P P A R G + LP P G A + G G PG PS G Sbjct: 214 LGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGS---WAHPGRTRGPSDRGF 270 Query: 61 C----AQCAPEPAPLTGALS---------GRLHVAFPEGYHKINR--DTPSPQGASETR 104 C A+ A E L GALS GR H A P + R DTP P +ET+ Sbjct: 271 CVVSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCPPVYAETK 329 >gi|116284398 WAS/WASL interacting protein family, member 1 [Homo sapiens] Length = 503 Score = 32.7 bits (73), Expect = 0.065 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 15 SGGCTLPPLLAAGGRAL--RQDSAAAGPGQRPPLPKPGGNSSP 55 SGG + PPLL GGR+ + S +GPG R P+P PG S P Sbjct: 121 SGG-SRPPLLPPGGRSTSAKPFSPPSGPG-RFPVPSPGHRSGP 161 Score = 28.5 bits (62), Expect = 1.2 Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 24/84 (28%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQ-------------DSAAAGPGQRPPLPKPGGNS 53 PV P RSG PP ++ G R DS +GP RPPLP Sbjct: 368 PVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP--RPPLP------ 419 Query: 54 SPSRHGGCAQCAPEPAPLTGALSG 77 P R A P P P T +G Sbjct: 420 -PDRPS--AGAPPPPPPSTSIRNG 440 >gi|38373695 WAS/WASL interacting protein family, member 1 [Homo sapiens] Length = 503 Score = 32.7 bits (73), Expect = 0.065 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 15 SGGCTLPPLLAAGGRAL--RQDSAAAGPGQRPPLPKPGGNSSP 55 SGG + PPLL GGR+ + S +GPG R P+P PG S P Sbjct: 121 SGG-SRPPLLPPGGRSTSAKPFSPPSGPG-RFPVPSPGHRSGP 161 Score = 28.5 bits (62), Expect = 1.2 Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 24/84 (28%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQ-------------DSAAAGPGQRPPLPKPGGNS 53 PV P RSG PP ++ G R DS +GP RPPLP Sbjct: 368 PVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP--RPPLP------ 419 Query: 54 SPSRHGGCAQCAPEPAPLTGALSG 77 P R A P P P T +G Sbjct: 420 -PDRPS--AGAPPPPPPSTSIRNG 440 >gi|7710121 engrailed homeobox 2 [Homo sapiens] Length = 333 Score = 32.7 bits (73), Expect = 0.065 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 23 LLAAGGRALRQDSAAAGPGQRPPLPK---------PGGNSSPSRHGGCAQCAPEPAPLTG 73 LL +G R RQ+ A PG PLP GG+ + S HGG + PL G Sbjct: 121 LLGSGSREPRQNPPCA-PGAGGPLPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPGGPLDG 179 Query: 74 ALSGR 78 +L R Sbjct: 180 SLKAR 184 >gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] Length = 1120 Score = 32.7 bits (73), Expect = 0.065 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 11/92 (11%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKP-GGNSSPSRHGGCAQCA 65 P+P PARS P + G R S +G Q P P+P GG+ SP + + Sbjct: 605 PLPLPPARS-----PSQESIGAR-----SRGSGHSQEQPAPQPSGGDPSPPQERNLPEGT 654 Query: 66 PEPAPLTGALSGRLHVAFPEGYHKINRDTPSP 97 P L +L G+ + Y + + +P+P Sbjct: 655 ERPPKLCSSLPGQGPPPYVFMYPQGSPSSPAP 686 Score = 28.5 bits (62), Expect = 1.2 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 16/105 (15%) Query: 7 PVPTAPAR----SGGCTLPPLL--------AAGGRALRQDSAAAGPGQRPPLPKPGGNSS 54 P P P R SG PP L A G R S AGP + P P P G +S Sbjct: 786 PPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPAS 845 Query: 55 PSRHGGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQG 99 + + PE P + SG + F E + + P P G Sbjct: 846 DTEE---EEPGPEGTPPSRGSSGE-GLPFAEEGNLTIKQRPKPAG 886 Score = 26.2 bits (56), Expect = 6.1 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 21 PPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEPAPLTGALS 76 P L+A G + A AGP L G SP A PEP PL A S Sbjct: 561 PELMAIEGLENGEGPATAGPRL---LTFQGSELSPELQAAMAGGGPEPLPLPPARS 613 Score = 26.2 bits (56), Expect = 6.1 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Query: 36 AAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEPAP 70 A+A PG PLP P SP A P+P P Sbjct: 930 ASATPGPAAPLPSPTPGESPP-----ASSLPQPEP 959 >gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] Length = 1202 Score = 32.7 bits (73), Expect = 0.065 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 11/92 (11%) Query: 7 PVPTAPARSGGCTLPPLLAAGGRALRQDSAAAGPGQRPPLPKP-GGNSSPSRHGGCAQCA 65 P+P PARS P + G R S +G Q P P+P GG+ SP + + Sbjct: 687 PLPLPPARS-----PSQESIGAR-----SRGSGHSQEQPAPQPSGGDPSPPQERNLPEGT 736 Query: 66 PEPAPLTGALSGRLHVAFPEGYHKINRDTPSP 97 P L +L G+ + Y + + +P+P Sbjct: 737 ERPPKLCSSLPGQGPPPYVFMYPQGSPSSPAP 768 Score = 28.5 bits (62), Expect = 1.2 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 16/105 (15%) Query: 7 PVPTAPAR----SGGCTLPPLL--------AAGGRALRQDSAAAGPGQRPPLPKPGGNSS 54 P P P R SG PP L A G R S AGP + P P P G +S Sbjct: 868 PPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPAS 927 Query: 55 PSRHGGCAQCAPEPAPLTGALSGRLHVAFPEGYHKINRDTPSPQG 99 + + PE P + SG + F E + + P P G Sbjct: 928 DTEE---EEPGPEGTPPSRGSSGE-GLPFAEEGNLTIKQRPKPAG 968 Score = 26.2 bits (56), Expect = 6.1 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 21 PPLLAAGGRALRQDSAAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEPAPLTGALS 76 P L+A G + A AGP L G SP A PEP PL A S Sbjct: 643 PELMAIEGLENGEGPATAGPRL---LTFQGSELSPELQAAMAGGGPEPLPLPPARS 695 Score = 26.2 bits (56), Expect = 6.1 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Query: 36 AAAGPGQRPPLPKPGGNSSPSRHGGCAQCAPEPAP 70 A+A PG PLP P SP A P+P P Sbjct: 1012 ASATPGPAAPLPSPTPGESPP-----ASSLPQPEP 1041 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.132 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,354,438 Number of Sequences: 37866 Number of extensions: 440304 Number of successful extensions: 2848 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 336 Number of HSP's that attempted gapping in prelim test: 2348 Number of HSP's gapped (non-prelim): 788 length of query: 106 length of database: 18,247,518 effective HSP length: 76 effective length of query: 30 effective length of database: 15,369,702 effective search space: 461091060 effective search space used: 461091060 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.