Guide to the Human Genome
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Search of human proteins with 239742939

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
         (321 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]           674   0.0  
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ...   674   0.0  
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ...   674   0.0  
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    58   1e-08
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]            55   6e-08
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  55   8e-08
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            54   1e-07
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    52   7e-07
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    52   7e-07
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            50   2e-06
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera...    50   2e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    50   4e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    49   5e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             49   8e-06
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ...    48   1e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    48   1e-05
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ...    48   1e-05
gi|171543895 ataxin 2 [Homo sapiens]                                   47   2e-05
gi|40353727 synaptopodin isoform A [Homo sapiens]                      47   2e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    47   2e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     47   3e-05
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa...    46   4e-05
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]           46   5e-05
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            46   5e-05
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]           46   5e-05
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]           46   5e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    46   5e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    46   5e-05
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]           45   7e-05
gi|239748337 PREDICTED: hypothetical protein XP_002346632 [Homo ...    45   7e-05

>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score =  674 bits (1740), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
           MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL
Sbjct: 1   MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60

Query: 61  GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
           GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP
Sbjct: 61  GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120

Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
           WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP
Sbjct: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180

Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
           PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR
Sbjct: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240

Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
           GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG
Sbjct: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300

Query: 301 GSDTGHLPLGNEGGRGEGEGE 321
           GSDTGHLPLGNEGGRGEGEGE
Sbjct: 301 GSDTGHLPLGNEGGRGEGEGE 321


>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
           sapiens]
          Length = 336

 Score =  674 bits (1740), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
           MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL
Sbjct: 1   MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60

Query: 61  GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
           GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP
Sbjct: 61  GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120

Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
           WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP
Sbjct: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180

Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
           PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR
Sbjct: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240

Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
           GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG
Sbjct: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300

Query: 301 GSDTGHLPLGNEGGRGEGEGE 321
           GSDTGHLPLGNEGGRGEGEGE
Sbjct: 301 GSDTGHLPLGNEGGRGEGEGE 321


>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
           sapiens]
          Length = 321

 Score =  674 bits (1740), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
           MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL
Sbjct: 1   MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60

Query: 61  GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
           GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP
Sbjct: 61  GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120

Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
           WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP
Sbjct: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180

Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
           PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR
Sbjct: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240

Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
           GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG
Sbjct: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300

Query: 301 GSDTGHLPLGNEGGRGEGEGE 321
           GSDTGHLPLGNEGGRGEGEGE
Sbjct: 301 GSDTGHLPLGNEGGRGEGEGE 321


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 73/244 (29%), Positives = 89/244 (36%), Gaps = 47/244 (19%)

Query: 62  LPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPW 121
           +P A    AGP P+PA P +P        A   ARA   P  GP P P P   + A    
Sbjct: 140 VPAAAAVAAGPEPAPAGPAKP-----AGPAALAARAGPGPGPGPGPGPGPGPGKPAGP-- 192

Query: 122 NAASLLNRGCCWGAAALLIGRLLGA------NQKRQRMPPLP-PSSPKARMERASRKLPS 174
            AA  LN     G+AALL      A      N     + PLP P++P   ++      P 
Sbjct: 193 GAAQTLN-----GSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ-----TPP 242

Query: 175 RVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLP------PCRLRLQDSGPRRRPG 228
            V +  P PAP  P+P         P A A       P      P  L      P   P 
Sbjct: 243 FVGAAAP-PAPAAPSP---------PAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPT 292

Query: 229 -----PGPPALRSGRSRGSGRPPDSA--GAAGTGGSGWAAALRGWPAPSSFAASSALPEE 281
                P P A ++G S G+   P  A  G AG  G     A    PAP   A S     +
Sbjct: 293 AAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQ 352

Query: 282 CLPP 285
             PP
Sbjct: 353 AAPP 356



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 59/228 (25%), Positives = 75/228 (32%), Gaps = 25/228 (10%)

Query: 59  GLGLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGP-VPA-PTPPRARN 116
           G   P  G P A P P PA   RP         G   R     P  P VPA P PP A+ 
Sbjct: 74  GPAAPAEGAPGAAPEPPPAGRARP-------GGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126

Query: 117 AETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRV 176
              P  +A     G C   A +     + A  +     P  P+ P A   RA    P   
Sbjct: 127 RPPPEGSA-----GSC---APVPAAAAVAAGPEPAPAGPAKPAGPAALAARAG---PGPG 175

Query: 177 NSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRR---RPGPGPP- 232
               P P P    P   G       +AA           + L ++GP      P P  P 
Sbjct: 176 PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG 235

Query: 233 -ALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALP 279
             +++    G+  PP  A  +       AA     P P    A+ A P
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP 283



 Score = 33.1 bits (74), Expect = 0.34
 Identities = 38/146 (26%), Positives = 47/146 (32%), Gaps = 26/146 (17%)

Query: 156 LPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCR 215
           L P +P+ R   A       V+  P   A   P    +G  G  P           P  R
Sbjct: 43  LAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPP--------PAGR 94

Query: 216 LRLQDSGPRR-------RP----GPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALR 264
            R    GP+R       RP    GP PPA +        RPP    A        AAA+ 
Sbjct: 95  ARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL-------RPPPEGSAGSCAPVPAAAAVA 147

Query: 265 GWPAPSSFAASSALPEECLPPRRGCG 290
             P P+    +       L  R G G
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPG 173


>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 445

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 77/269 (28%), Positives = 100/269 (37%), Gaps = 63/269 (23%)

Query: 14  PTGLRVPHRAPHILAQ-------LQPNETQPLGAHSTPYGGTLE-----AVSAFHRLGLG 61
           PT L  P RA     Q       L+     P G  S P GG        A +A H+LG G
Sbjct: 159 PTSLGFPARAGQGQVQGAAPGRRLRGEPKTPPG-RSGPSGGVRSGAGHRAATAEHQLGAG 217

Query: 62  LPIA---GRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTP------- 111
             +    G P   P   P  P RP   H   S G        PP+  +P P P       
Sbjct: 218 FSVRNGPGPPARLPPAPPGPPLRPARPHNPTSRGPGRLLTCEPPSRKLPPPLPLCRSRWV 277

Query: 112 --------PRARNAETPWN-AASLLNRGCCWGA--AALLIGRLLGANQKRQRMPPLPPSS 160
                   PR R    P+    +L  RG    +  +A+L+ R+ G   +      L PSS
Sbjct: 278 LAPPPTVRPRLRVLTPPFTLLCALPERGSRTPSTRSAVLVDRVAGLGTEL----TLTPSS 333

Query: 161 PKAR----MERASRKLPSRV------NSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGW 210
            +A     +    +  P+R         RPP   P+ P+P+ QG   R+PR         
Sbjct: 334 RRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRL-------- 385

Query: 211 LPPCRLRLQDSGPRRR---PGPGP-PALR 235
               R  L    PR R   PGPGP PAL+
Sbjct: 386 ---LRAALALGAPRGRTPSPGPGPAPALQ 411



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 50/188 (26%), Positives = 67/188 (35%), Gaps = 37/188 (19%)

Query: 104 GPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA 163
           G +P    P  R+  +P             G   L +G       +R  +P   P +P  
Sbjct: 76  GALPPDRSPTPRSRVSP-------------GVTGLAVGPGNPKRCQRSGVPYEGPGAPGG 122

Query: 164 RMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGP 223
           +  R SR       +R P    TRP        GRE  A  G+ R    P  LR    G 
Sbjct: 123 QQLRKSR-------ARLPR---TRP--------GREDAAVRGRNRDPAEPGSLRPTSLGF 164

Query: 224 RRRPGPG--PPALRSGRSRGSGR-PPDSAGAAG--TGGSGWAAALRGWPAPSSFAASSAL 278
             R G G    A    R RG  + PP  +G +G    G+G  AA       + F+  +  
Sbjct: 165 PARAGQGQVQGAAPGRRLRGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGP 224

Query: 279 -PEECLPP 285
            P   LPP
Sbjct: 225 GPPARLPP 232


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 66/229 (28%), Positives = 85/229 (37%), Gaps = 39/229 (17%)

Query: 65   AGRPKAGPSPSPAAPTRPRLLH--GRRSAGHVARADVSPPAGPVPAPTP--PRARNAETP 120
            AG P+  P P PA P    L H          AR    PP  P P  T   P+ + + TP
Sbjct: 1186 AGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTP 1245

Query: 121  WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
             +    L      G  +  + R  G        PP PP++PK    +A   LPS   S  
Sbjct: 1246 TSKKVPLP-----GPGSPEVKRAHGTPPPVSPKPPPPPTAPKP--VKAVAGLPS--GSAG 1296

Query: 181  PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
            P PAP+           R+P AA  +  G  P        + P + P PG PAL      
Sbjct: 1297 PSPAPSP---------ARQPPAALAKPPGTPPSL-----GASPAKPPSPGAPALHV---- 1338

Query: 241  GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
               +PP +A AA       AAA    PAP   A+      + L     C
Sbjct: 1339 -PAKPPRAAAAA-------AAAAAAPPAPPEGASPGDSARQKLEETSAC 1379



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 64/229 (27%), Positives = 84/229 (36%), Gaps = 40/229 (17%)

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
           P   +P +   P+P A TR     G R A H++ +      GP P P+ P +R+ E    
Sbjct: 673 PTTEKPSSHLPPTPRATTRQDSSLGGR-ARHMSSSQELLGDGP-PGPSSPMSRSQEY--- 727

Query: 123 AASLLNRGCCWGAAALLI--GRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
              LL+ G   G        GR  G + KR  +PP+P    +      S   P      P
Sbjct: 728 ---LLDEGPAPGTPPREARPGRH-GHSIKRASVPPVPGKPRQVLPPGTSHFTP------P 777

Query: 181 PHPAPTRP-TPRVQGG-FGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGR 238
             P  TRP +P+  GG  G  P  A  +    L P         P  RP       +S  
Sbjct: 778 QTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLP---------PTERPMSPRSLPQSPT 828

Query: 239 SRGSGR--PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
            RG     P    G  G    G        PAP      +A+P  CLPP
Sbjct: 829 HRGFAYVLPQPVEGEVGPAAPG--------PAPPP--VPTAVPTLCLPP 867


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 80/270 (29%), Positives = 102/270 (37%), Gaps = 28/270 (10%)

Query: 8   PEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGLGLPIAGR 67
           P A   P  L  P R P    + +  E     A +T  G  L A+    RLG  +P+  R
Sbjct: 38  PTARAPPPILPAPQRPP---TRAREWEGAAWAAGATGVGAALLALPGSRRLGR-VPLTFR 93

Query: 68  PKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAP--TPPRARNAET--PWNA 123
            +A P P+P AP R R   GR       RA  S    P  A    PPR R+     P + 
Sbjct: 94  -EASPGPAPGAP-RARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSV 151

Query: 124 ASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH- 182
            S +              R    + +R+ +P  PP  P+       R       SR P  
Sbjct: 152 GSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSL 211

Query: 183 -PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDS---GPRRRPGPGPPALRSGR 238
            P P R   R +       R+ AG G   LP  R   +     G RRR G     +R GR
Sbjct: 212 SPFPRRCRRRAE-------RSPAGHG---LPLPRSLSRGGEVVGARRRRGGEERRVR-GR 260

Query: 239 SRGS--GRPPDSAGAAGTGGSGWAAALRGW 266
            +G   G PP  AG A  G +G   A R W
Sbjct: 261 RQGCALGSPPIPAGPAAPGRAGERRAARQW 290



 Score = 31.6 bits (70), Expect = 0.99
 Identities = 55/225 (24%), Positives = 74/225 (32%), Gaps = 20/225 (8%)

Query: 8   PEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTL----EAVSAFHRLG-LGL 62
           P       G R P  +P      +  E  P G H  P   +L    E V A  R G    
Sbjct: 197 PRLAAPLAGSRAPSLSPFPRRCRRRAERSPAG-HGLPLPRSLSRGGEVVGARRRRGGEER 255

Query: 63  PIAGRPKA---GPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGP--------VPAPTP 111
            + GR +    G  P PA P  P     RR+A    +    P   P        V     
Sbjct: 256 RVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVT 315

Query: 112 PRARNAETPWNAASLLNRGCCWGAAALLIG-RLLGANQKRQRMPPLPPSSPKARMERASR 170
           PRAR + T    +    +G     A    G RL   + + + +P    +S       +SR
Sbjct: 316 PRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSR 375

Query: 171 --KLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPP 213
             K PS     P  PA +      + G G      +     W PP
Sbjct: 376 RTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPP 420



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 46/160 (28%), Positives = 58/160 (36%), Gaps = 20/160 (12%)

Query: 148 QKRQRMPPLP----PSSPKARMERASRKLP-----SRVNSRPPH--PAPTRPTPRVQGGF 196
           ++ QR  P P    P  P+   +      P     S     PP   PAP RP  R +   
Sbjct: 2   ERGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWE 61

Query: 197 GREPRAAA---GQGRGWLPPCRL--RLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGA 251
           G    A A   G     LP  R   R+  +     PGP P A R+  S G    P    A
Sbjct: 62  GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRA 121

Query: 252 AGTGGSGWAAALRGWPAPSSFAASSALPE---ECLPPRRG 288
             + G   AAA R  P P   + +  LP     C+ P  G
Sbjct: 122 PSSAGKRPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVG 160


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 63/242 (26%), Positives = 89/242 (36%), Gaps = 50/242 (20%)

Query: 61  GLPIAGRPKAGPSPSPAAPTRPRL--LHGRRSAGHVARADVSPPAGPVPAPTPPRARNAE 118
           GL ++  P+    P P   T+P++  +HG+ SA    RA   PP G   AP+P + +   
Sbjct: 647 GLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTP 706

Query: 119 TPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMP-PLPPSSPKARMERASRKLPSRVN 177
           +  +A ++ +                     R R P P PP  P+   E  +   PS   
Sbjct: 707 SDKSAHTVEH------------------GSPRTRDPTPRPPGLPE---EATALAAPS--- 742

Query: 178 SRPPHPAPTRPTPRVQGGFGREPRAA---------AGQGRG---WLPPCRLRLQDSGPRR 225
              P  A  R  PR  G  GR    A         A   RG    L    + L   GPR 
Sbjct: 743 ---PPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPRE 799

Query: 226 RPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
           +P P   A RS       R P +     T   G   A    PAP +    + + +   PP
Sbjct: 800 KPAPPQKAKRSVPPASPARAPPA-----TETPGPEKAATDLPAPETPRKKTPIQK---PP 851

Query: 286 RR 287
           R+
Sbjct: 852 RK 853



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 57/216 (26%), Positives = 76/216 (35%), Gaps = 33/216 (15%)

Query: 100 SPPAGPVPAPTPPRARNA-ETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPP 158
           +P   PVP  TP  A  A   P ++ S  +     G    L  R+     +R+  P    
Sbjct: 587 APAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVA----RREARPA--- 639

Query: 159 SSPKARMERASRKL-PSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPP---- 213
              +AR E     L PS    +PP P P    P+V    G+   AAAG+     PP    
Sbjct: 640 ---RARGEIGGLSLSPSPERRKPPPPDPATK-PKVSWIHGKHSAAAAGRAPSPPPPGSEA 695

Query: 214 --------------CRLRLQDSGPRRR-PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
                             ++   PR R P P PP L    +  +   P  A A       
Sbjct: 696 APSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPL 755

Query: 259 WAAALRGWPAPSSFAASSALPEECLPPRRGCGWAEL 294
            A   R  PA  + AA S L  +     R  G AE+
Sbjct: 756 GAHGRRRSPAKRAEAA-SMLAADVRGKTRSLGRAEV 790


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 63/242 (26%), Positives = 89/242 (36%), Gaps = 50/242 (20%)

Query: 61  GLPIAGRPKAGPSPSPAAPTRPRL--LHGRRSAGHVARADVSPPAGPVPAPTPPRARNAE 118
           GL ++  P+    P P   T+P++  +HG+ SA    RA   PP G   AP+P + +   
Sbjct: 642 GLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTP 701

Query: 119 TPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMP-PLPPSSPKARMERASRKLPSRVN 177
           +  +A ++ +                     R R P P PP  P+   E  +   PS   
Sbjct: 702 SDKSAHTVEH------------------GSPRTRDPTPRPPGLPE---EATALAAPS--- 737

Query: 178 SRPPHPAPTRPTPRVQGGFGREPRAA---------AGQGRG---WLPPCRLRLQDSGPRR 225
              P  A  R  PR  G  GR    A         A   RG    L    + L   GPR 
Sbjct: 738 ---PPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPRE 794

Query: 226 RPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
           +P P   A RS       R P +     T   G   A    PAP +    + + +   PP
Sbjct: 795 KPAPPQKAKRSVPPASPARAPPA-----TETPGPEKAATDLPAPETPRKKTPIQK---PP 846

Query: 286 RR 287
           R+
Sbjct: 847 RK 848



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 57/216 (26%), Positives = 76/216 (35%), Gaps = 33/216 (15%)

Query: 100 SPPAGPVPAPTPPRARNA-ETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPP 158
           +P   PVP  TP  A  A   P ++ S  +     G    L  R+     +R+  P    
Sbjct: 582 APAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVA----RREARPA--- 634

Query: 159 SSPKARMERASRKL-PSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPP---- 213
              +AR E     L PS    +PP P P    P+V    G+   AAAG+     PP    
Sbjct: 635 ---RARGEIGGLSLSPSPERRKPPPPDPATK-PKVSWIHGKHSAAAAGRAPSPPPPGSEA 690

Query: 214 --------------CRLRLQDSGPRRR-PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
                             ++   PR R P P PP L    +  +   P  A A       
Sbjct: 691 APSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPL 750

Query: 259 WAAALRGWPAPSSFAASSALPEECLPPRRGCGWAEL 294
            A   R  PA  + AA S L  +     R  G AE+
Sbjct: 751 GAHGRRRSPAKRAEAA-SMLAADVRGKTRSLGRAEV 785


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 56/172 (32%), Positives = 63/172 (36%), Gaps = 40/172 (23%)

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
           LP    +  P P PT P  RV     REP  A G  R        RL+    R  P PGP
Sbjct: 200 LPQETAAPAPQPGPTAPPARV-----REPGRAEGASR------EPRLRSRAARPPPAPGP 248

Query: 232 PAL-RSGRSRGSGRP--------PDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282
            AL R+ RSR +GRP          +A  A  GG G      G  AP S A   A     
Sbjct: 249 GALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAW---- 304

Query: 283 LPPRRGCGWAELL--EREAGGSDTGHLPLGN------------EGGRGEGEG 320
                GC    L   + +  GS       GN             GG GEGEG
Sbjct: 305 --GLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEG 354


>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
           4 [Homo sapiens]
          Length = 1039

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 70/229 (30%), Positives = 87/229 (37%), Gaps = 65/229 (28%)

Query: 65  AGRPKAGP-SPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWNA 123
           A  P++GP SP+PAAP +P              A ++PP       TPPR R+  TP + 
Sbjct: 452 AAPPRSGPQSPAPAAPAQPG-------------ATLAPP-------TPPRPRDGGTPRH- 490

Query: 124 ASLLNRGCCWGAAA-----LLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNS 178
               +R   W A A     L +GR   A   R  +   PP     R+    R       +
Sbjct: 491 ----SRALSWAARAARPLPLFLGR---APPPRPAVEQPPPKVYVTRVRPGQR-------A 536

Query: 179 RPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPR---RRPGPGPPALR 235
            P  PAP  P P   G F   PR         LP  +LR     PR   RR G GP A +
Sbjct: 537 SPRAPAPRAPWPPFPGVF-LHPRP--------LPRVQLRAPPRPPRPHGRRTG-GPQATQ 586

Query: 236 SGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLP 284
                   RPP  A A   G  G A  L     P++    S L  E  P
Sbjct: 587 P-------RPPARAQATQGGREGQARTL----GPAAPTVDSNLSSEARP 624


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 54/197 (27%), Positives = 69/197 (35%), Gaps = 31/197 (15%)

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
           P  G    GP P P  P  P    G R  G        PP    P   PP+   + +P +
Sbjct: 102 PQGGNQPQGPPPPPGKPQGPPPQGGNRPQG--------PPPPGKPQGPPPQGDKSRSPRS 153

Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
                  G   G          G NQ +   PP PP  P+    +  +K        PP 
Sbjct: 154 PP-----GKPQGPPPQ------GGNQPQG--PPPPPGKPQGPPPQGGKK----PQGPPPP 196

Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGP--GPPALRSGRSR 240
             P  P P  QG   R  ++  G+ +G  PP +   Q  GP   PG   GPP     + +
Sbjct: 197 GKPQGPPP--QGDKSRSSQSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 252

Query: 241 GSGRPPDSAGAAGTGGS 257
           G   P    G    GGS
Sbjct: 253 GPPPPGKPQGPPAQGGS 269



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 53/186 (28%), Positives = 67/186 (36%), Gaps = 33/186 (17%)

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
           P  G    GP P P  P  P    G +  G        PP    P   PP+   + +P +
Sbjct: 41  PQGGNKPQGPPPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDKSRSPRS 92

Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
                  G   G          G NQ +   PP PP  P+    +      +R    PP 
Sbjct: 93  PP-----GKPQGPPP------QGGNQPQG--PPPPPGKPQGPPPQGG----NRPQGPPPP 135

Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSR 240
             P  P P  QG   R PR+  G+ +G  PP +   Q  GP   PG   GPP    G  +
Sbjct: 136 GKPQGPPP--QGDKSRSPRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPP--QGGKK 189

Query: 241 GSGRPP 246
             G PP
Sbjct: 190 PQGPPP 195



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 59/246 (23%), Positives = 82/246 (33%), Gaps = 55/246 (22%)

Query: 63  PIAGRPKAGPSPS----PAAPTRPRLLHGRRSAGHVARADVSPPA---GPVP-------A 108
           P  G+P+ GP P     P  P  P    G    G  +R+  SPP    GP P        
Sbjct: 113 PPPGKPQ-GPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 171

Query: 109 PTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARME-- 166
           P PP  +    P                        G  + +   PP  P  P  + +  
Sbjct: 172 PPPPPGKPQGPPPQ----------------------GGKKPQGPPPPGKPQGPPPQGDKS 209

Query: 167 RASRKLPSRVNSRPPH---------PAPTRPT-PRVQGGFGREPRAAAGQGRGWLPPCRL 216
           R+S+  P +    PP          P P +P  P  QGG   +P+     G+   PP + 
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG--NKPQGPPPPGKPQGPPAQG 267

Query: 217 RLQDSGPRRRPGP--GPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAA 274
             +    R  PG   GPP       +G   PP + G      +  A   +G P P     
Sbjct: 268 GSKSQSARSPPGKPQGPPQQEGNNPQGP--PPPAGGNPQQPQAPPAGQPQGPPRPPQGGR 325

Query: 275 SSALPE 280
            S  P+
Sbjct: 326 PSRPPQ 331


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 63/243 (25%), Positives = 79/243 (32%), Gaps = 68/243 (27%)

Query: 7   RPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHST----PYGGTLEAVSAFHRLGLGL 62
           +PE GR P G   P R P    +  P    P G + +    P  G  E            
Sbjct: 35  KPE-GRRPQGGNQPQRPPPPPGK--PQGPPPQGGNQSQGPPPPPGKPEGRP--------- 82

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
           P  G    GP P P  P RP    G +S G       +PP    P   PP+         
Sbjct: 83  PQGGNQSQGPPPHPGKPERPPPQGGNQSQG-------TPPPPGKPERPPPQ--------- 126

Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
                                 G NQ  +  PP PP  P    ER   +  ++    PPH
Sbjct: 127 ----------------------GGNQSHR--PPPPPGKP----ERPPPQGGNQSQGPPPH 158

Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGS 242
           P      P  +G   R  R+  G+ +G  PP     Q  G  +  GP PP    G     
Sbjct: 159 PGKPEGPPPQEGNKSRSARSPPGKPQG--PP-----QQEG-NKPQGPPPPGKPQGPPPAG 210

Query: 243 GRP 245
           G P
Sbjct: 211 GNP 213



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 53/194 (27%), Positives = 65/194 (33%), Gaps = 55/194 (28%)

Query: 61  GLPIAGRPKAG-----PSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRAR 115
           G P   RP+ G     P P P  P  P    G +S G            P P P  P  R
Sbjct: 34  GKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQG------------PPPPPGKPEGR 81

Query: 116 NAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSR 175
             +                          G NQ +   PP  P  P    ER   +  ++
Sbjct: 82  PPQ--------------------------GGNQSQG--PPPHPGKP----ERPPPQGGNQ 109

Query: 176 VNSRPPHPA-PTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGP--GPP 232
               PP P  P RP P  QGG  +  R     G+   PP +   Q  GP   PG   GPP
Sbjct: 110 SQGTPPPPGKPERPPP--QGG-NQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPP 166

Query: 233 ALRSGRSRGSGRPP 246
                +SR +  PP
Sbjct: 167 PQEGNKSRSARSPP 180


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 56/204 (27%), Positives = 73/204 (35%), Gaps = 45/204 (22%)

Query: 87  GRRSAGHVAR-----ADVSPPAGPVP---------APTPP-RARNAETPWNAASLLNRGC 131
           G+RS  H  R     +    P+ P P         APTPP R + + +P +A S   RG 
Sbjct: 318 GQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRG- 376

Query: 132 CWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPR 191
                    GR  G   +R+R         + R  R+S   P R   R P PAP R + R
Sbjct: 377 ---------GRAAGGAGRRRRR------RRRRRRSRSSASAPRRRGRRRPRPAPPRGSSR 421

Query: 192 VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGA 251
                     + +G GRG             P   P PG      G  + +   P  A  
Sbjct: 422 SLSR--ARSSSDSGSGRG------------APGPGPEPGSERGHGGHGKRAKERPPRARP 467

Query: 252 AGTGGSGWAAALRGWPAPSSFAAS 275
           A T  S  A   RG P   S + S
Sbjct: 468 ASTSPSPGAHGRRGGPEGKSSSRS 491



 Score = 33.9 bits (76), Expect = 0.20
 Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 14/124 (11%)

Query: 162 KARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDS 221
           ++R  +  RK  ++   RP   +P R + R   G    P  ++        P RL     
Sbjct: 225 RSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDS-RSPSRL----- 278

Query: 222 GPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEE 281
            P+ R          GR  GS R   S   + +GGSGW +  R   +     A    P  
Sbjct: 279 SPKHRD--------EGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGS 330

Query: 282 CLPP 285
              P
Sbjct: 331 AHSP 334



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 47/183 (25%), Positives = 61/183 (33%), Gaps = 41/183 (22%)

Query: 65  AGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWNAA 124
           +GR   GP P P +         R   GH  RA             PPRAR A T  +  
Sbjct: 434 SGRGAPGPGPEPGSE--------RGHGGHGKRAK----------ERPPRARPASTSPSPG 475

Query: 125 SLLNRGCCWGAAALLIGRLLGANQKRQRMP-PLPPSSPKARMERASRKLPSRVNSRPPHP 183
           +   RG   G ++              R P P P S   +R    SR   SR   + PH 
Sbjct: 476 AHGRRGGPEGKSS-------------SRSPGPHPRSWSSSRSPSKSR---SRSAEKRPHS 519

Query: 184 APTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGP---RRRPGPG---PPALRSG 237
               P+P+      ++    A          R R +   P   RRR  P    P  + S 
Sbjct: 520 PSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSA 579

Query: 238 RSR 240
           R R
Sbjct: 580 RKR 582


>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
           sapiens]
          Length = 245

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 60/217 (27%), Positives = 79/217 (36%), Gaps = 35/217 (16%)

Query: 85  LHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLL 144
           L G R    V     +P  GP      PRAR  +        L+      AA    G+ L
Sbjct: 36  LEGARRQRRVGSRQRTP--GPDGQDASPRAREEDGGRERRGGLSHSKDCNAARNARGKHL 93

Query: 145 GANQKRQRM-----PPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGRE 199
              ++R+ +     PP P   P+ R + A  +  +R+ +  P P    P P         
Sbjct: 94  RRTRRRRTLGRRCRPPAPRPRPRPRRKLALDQAATRIPAARPRP----PGP--------- 140

Query: 200 PRAAAGQGRGW-LPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
                G+G  W + P   RL    P  +P PGPP       R + RP    G  G GG+ 
Sbjct: 141 ----GGRGSHWKIQPGVQRLPRPTPSAQPRPGPP-----ERRRASRPLIGCGRGG-GGTW 190

Query: 259 WAAALRGWPAP-SSFAAS---SALPEECLPPRRGCGW 291
             AA   W  P   F  S    A P   LPP R   W
Sbjct: 191 RRAADSRWRRPGGGFQRSRREKARPPRRLPPDRVLSW 227


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 55/228 (24%), Positives = 74/228 (32%), Gaps = 32/228 (14%)

Query: 61   GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
            G+P +  PK  P+P  A P  P+      S         + P  P   P  P  + A TP
Sbjct: 929  GIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP 988

Query: 121  WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
              A     +G   G A        GA       PP P  SP A         P       
Sbjct: 989  PAATPPSPKG---GPAT---PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP------- 1035

Query: 181  PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
              PA T P+P+     G        +G    P   L      P  + GP  P+L+   + 
Sbjct: 1036 --PAATPPSPK-----GSPAATPLPKGAPTTPAATL------PSPKGGPATPSLKGAPTP 1082

Query: 241  GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRG 288
             +  PP   G   T       + +G P P +    S       PP +G
Sbjct: 1083 PAATPPSPKGGPAT------PSPKGAPMPPAATPPSPKGGLATPPHKG 1124



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 53/222 (23%), Positives = 66/222 (29%), Gaps = 34/222 (15%)

Query: 37   PLGAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVAR 96
            P GA +TP      A     + GL  P    PK  P+   A P  P+      S      
Sbjct: 1191 PKGAPTTP-----AATPPSPKGGLATP---SPKGAPTTPAATPPSPKGGLATPSPKGAPT 1242

Query: 97   ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPL 156
               + P  P   P  P  + A TP  A     +G       L      GA       PP 
Sbjct: 1243 TPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG------GLATPPHKGAPNPAVVTPPS 1296

Query: 157  PPSSPKARMERASRKLPSRV--------NSRPPHPAPTRP--TPRVQGGFGREPRAAAGQ 206
            P   P     + +   P+           + PP  APT P  TP    G    P      
Sbjct: 1297 PKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSS 1356

Query: 207  GRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDS 248
              G           + P  + GP PPA       G    P S
Sbjct: 1357 KGG----------PTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388



 Score = 37.0 bits (84), Expect = 0.023
 Identities = 69/305 (22%), Positives = 92/305 (30%), Gaps = 38/305 (12%)

Query: 8    PEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTP-YGGTLEAVSAFHRLGLGLPIAG 66
            P    +P    +P  AP   A   P+   P G  +TP   G     +A      G P   
Sbjct: 1041 PSPKGSPAATPLPKGAPTTPAATLPS---PKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097

Query: 67   RPKAGPSPSPA----------------APTRPRLLHGRRSAGHVARADVSPPAGPVPAPT 110
             PK  P P  A                APT P         G         P  P   P 
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP 1157

Query: 111  PPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASR 170
             P+   A  P   A                G    + +     P   P SPK  +   S 
Sbjct: 1158 SPKGGLATPPPKGAPTTPAATPPSPKG---GLATPSPKGAPTTPAATPPSPKGGLATPSP 1214

Query: 171  K-LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGW--LPPCRLRLQDSGPRRRP 227
            K  P+   + PP P     TP  +G     P A     +G    PP        G    P
Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGA-PTTPAATPPSPKGGPATPP------PKGAPTPP 1267

Query: 228  GPGPPALRSGRS----RGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECL 283
               PP+L+ G +    +G+  P      +  GG    +  +G P P +    S       
Sbjct: 1268 AATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA-TSPPKGAPTPPAATPPSPKGSPGT 1326

Query: 284  PPRRG 288
            PP +G
Sbjct: 1327 PPPKG 1331



 Score = 32.3 bits (72), Expect = 0.58
 Identities = 47/204 (23%), Positives = 68/204 (33%), Gaps = 24/204 (11%)

Query: 61   GLPIAGRPKAGPSPSPAAPTRPRLLHGR-RSAGHVARADVSPPA----GPVPA------- 108
            G P    PK  P+P  A P  P+   G     G      V+PP+      +PA       
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG 1358

Query: 109  -PTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPK----A 163
             PT P ++   TP  A      G      +   G  + + +     P + P SPK     
Sbjct: 1359 GPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPAT 1418

Query: 164  RMERASRKLPSRVNSRPP--HPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDS 221
             + R     PS+ +  PP   P   +  P      G  P   + +G   LP     +   
Sbjct: 1419 PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG-GPATPSSKGDPTLP----AVTPP 1473

Query: 222  GPRRRPGPGPPALRSGRSRGSGRP 245
             P+  P P   A  S   +    P
Sbjct: 1474 SPKEPPAPKQVATSSSPKKAPATP 1497



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 43/160 (26%), Positives = 56/160 (35%), Gaps = 37/160 (23%)

Query: 64   IAGRPKAGPS-PS----PAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAP--TPPRARN 116
            I   PK  P+ PS    P APT   LL  +  A    +  + PPA  VP+P  TP     
Sbjct: 1509 IPSSPKEVPATPSSRRDPIAPTAT-LLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTP 1567

Query: 117  AETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRV 176
             E P   +S                      ++    P + PS+ K         +P  V
Sbjct: 1568 KEAPATPSS----------------------KEASSPPAVTPSTYKGAPSPKELLIPPAV 1605

Query: 177  NSRPPHPAPTRPT---PRVQGGFGREPRAAAGQGRGWLPP 213
             S  P  APT P    P  + G    P   A +G    PP
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKG----PATPAPKGTPTSPP 1641


>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
           sapiens]
          Length = 398

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 78/266 (29%), Positives = 96/266 (36%), Gaps = 64/266 (24%)

Query: 14  PTGLRVPHRAPHILAQ-------LQPNETQPLGAHSTPYGGTLE-----AVSAFHRLGLG 61
           PT L  P RA     Q       L+     P G  S P GG        A +A H+LG G
Sbjct: 112 PTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPG-RSGPSGGVRSGAGHRAAAAEHQLGAG 170

Query: 62  L-------PIAGRPKAGPSP--SPAAPTRPRLLHGRRSAGHVARADVSPPAGPV------ 106
                   P A  P A P P   PA P RP     R        +   PP  P+      
Sbjct: 171 FSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWV 230

Query: 107 ---PAPTPPRARNAETPWNA-ASLLNRGCCWGA--AALLIGRLLGANQKRQRMPPLPPSS 160
              P P  PR R    P     +L  RG    +  +A+L GR+ G   +      L PSS
Sbjct: 231 LAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELT----LTPSS 286

Query: 161 PKARMERA----SRKLPSRVNS------RPPHPAPTRPTPRVQGGFGREPR-----AAAG 205
            +A    A     +  P+R         RPP   P+ P+P+ QG   R+PR      A G
Sbjct: 287 RRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARG 346

Query: 206 QGRGWLPPCRLRLQDSGPRRRPGPGP 231
             RG             P  RPGP P
Sbjct: 347 APRG-----------RTPSPRPGPAP 361



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 50/195 (25%), Positives = 68/195 (34%), Gaps = 31/195 (15%)

Query: 104 GPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA 163
           G +P    P  R+  +P             G  +L +G       +R  +P   P +P  
Sbjct: 29  GALPPDRSPTPRSRVSP-------------GVTSLAVGPGNPTRCQRSGVPYEGPGAPGG 75

Query: 164 RMERASR-KLP-----------SRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWL 211
           +  R SR +LP            R N  P  P   RPT       G   RA  G+ +G  
Sbjct: 76  QQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPT-----SLGFPARAGQGRVQGAA 130

Query: 212 PPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSS 271
           P  +LR +   P  R GP    +RSG    +       GA  +  +G     R  PAP  
Sbjct: 131 PGRKLRGEPKTPPGRSGPS-GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG 189

Query: 272 FAASSALPEECLPPR 286
                A P     PR
Sbjct: 190 PLLRPARPPRPYFPR 204


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 47/198 (23%), Positives = 70/198 (35%), Gaps = 24/198 (12%)

Query: 89  RSAGHVARADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQ 148
           R  G  A       A P P P PP +R +  P  +    + G   GA      RLLG   
Sbjct: 40  RGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLLGLGG 99

Query: 149 KRQRM---------PPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGRE 199
             +           P  PP++P       +R  P R       PAP  P P  +  +G  
Sbjct: 100 PPRPFVVLLLPLASPGAPPAAPTRASPLGARASPPRSGVSLARPAPGCPRPACEPVYG-- 157

Query: 200 PRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGW 259
                        P  + L+    +++        +  + +    PP +A     GGSG 
Sbjct: 158 -------------PLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGL 204

Query: 260 AAALRGWPAPSSFAASSA 277
            A+    P+PSS + SS+
Sbjct: 205 LASPAAAPSPSSSSVSSS 222



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 46/203 (22%), Positives = 62/203 (30%), Gaps = 43/203 (21%)

Query: 58  LGLGLP-----IAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPP 112
           LGLG P     +   P A P   PAAPTR   L  R           SPP   V    P 
Sbjct: 95  LGLGGPPRPFVVLLLPLASPGAPPAAPTRASPLGAR----------ASPPRSGVSLARPA 144

Query: 113 RARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKL 172
                            GC   A   + G L  + + +Q+           + ++  ++ 
Sbjct: 145 ----------------PGCPRPACEPVYGPLTMSLKPQQQQ----------QQQQQQQQQ 178

Query: 173 PSRVNSRPPHPAPTRPTPRVQGGFG--REPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPG 230
             +   +   P P     R  GG G    P AA       +         S      G G
Sbjct: 179 QQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATAPSSVVAATSGGG 238

Query: 231 PPALRSGRSRGSGRPPDSAGAAG 253
            P L  GR+   G P  +    G
Sbjct: 239 RPGLGRGRNSNKGLPQSTISFDG 261



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 33/116 (28%), Positives = 39/116 (33%), Gaps = 6/116 (5%)

Query: 176 VNSRPPHPAP-----TRPTPRVQGGFGR-EPRAAAGQGRGWLPPCRLRLQDSGPRRRPGP 229
           VN   P P+P     +RP  R Q G     PRAA        PP R     S P     P
Sbjct: 546 VNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSP 605

Query: 230 GPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
            P +    R    G P  S  A     +   +A RG  +      S   P E   P
Sbjct: 606 APVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATP 661



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 35/157 (22%), Positives = 48/157 (30%), Gaps = 37/157 (23%)

Query: 66  GRPKAGPSPSPAAPTRPRLLHGRRS----AGHVARADVSPPAGPVPAPTPPRARNAETPW 121
           G P   P PSP++    R   G  S    A    R    PP+ P   P+ P A  +  P 
Sbjct: 549 GVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAP- 607

Query: 122 NAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSR------ 175
                                 +    KR      P  SPKA+    + ++ +       
Sbjct: 608 ----------------------VSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISS 645

Query: 176 ----VNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGR 208
               V+  PP  A T P  R     G      +G  R
Sbjct: 646 GLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPR 682


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 72/292 (24%), Positives = 102/292 (34%), Gaps = 55/292 (18%)

Query: 13  APTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVS---------------AFHR 57
           +P   R    +P +      +  QP  A S PYGG +  VS               +F  
Sbjct: 610 SPALPRPSRSSPGLYTSPGQDSLQPT-AVSPPYGGDISPVSPSRAWSPRAKQAPRPSFST 668

Query: 58  LGLGLPIAGRPKAGPSP---SPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRA 114
              G+    R ++ P+    +P A   P  L G  S G       S  + P P P PP  
Sbjct: 669 RNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPM 728

Query: 115 RNAETPWNAASLLN----RGCCWGAAALLIGRLLGANQKRQRMP-------PLPPSSPKA 163
             + +  + + L      R       ALL   ++ A +++   P       P P S P+A
Sbjct: 729 SPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRA 788

Query: 164 RMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGP 223
                           PP P P  P PR++      P +AA  G  + P  R  L  +GP
Sbjct: 789 P---------------PPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPL-PAGP 832

Query: 224 R-----RRPGPGPPA----LRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGW 266
                 R P P PP      RS          + +GA   G  G+    RGW
Sbjct: 833 SSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGW 884


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 61/234 (26%), Positives = 79/234 (33%), Gaps = 18/234 (7%)

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARA---DVSPPAGPVPAP-TPPRARNAE 118
           P  G    GP P P  P  P    G +S G   R    +  PP G   +   PPR    E
Sbjct: 62  PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPE 121

Query: 119 TPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNS 178
            P       ++G              G NQ +   PP  P  P+    +      ++   
Sbjct: 122 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG--PPPRPGKPEGPPPQGG----NQSQG 175

Query: 179 RPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRS 236
            PPHP      P   G   + P    G+  G  PP +   Q  GP  RPG   GPP+   
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG--PPPQGGNQSQGPPPRPGKPEGPPS--Q 231

Query: 237 GRSRGSGRPPDSAGAAGTGGSGWAAALRGWP--APSSFAASSALPEECLPPRRG 288
           G ++  G PP      G          R  P   P         P++ LPP  G
Sbjct: 232 GGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAG 285



 Score = 37.0 bits (84), Expect = 0.023
 Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 24/133 (18%)

Query: 145 GANQKRQRMPPLPPSSPKARMERASRKL------PSRVNSRPPH---------PAPTRPT 189
           G NQ  QR PP PP  P+ R  +   +       P +    PP          P P +P 
Sbjct: 43  GGNQP-QRTPP-PPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 100

Query: 190 --PRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSRG-SGR 244
             P   G   + P    G+  G  PP +   Q  GP  RPG   GPP     +S+G   R
Sbjct: 101 GQPPQGGNQSQGPPPRPGKPEG--PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 158

Query: 245 PPDSAGAAGTGGS 257
           P    G    GG+
Sbjct: 159 PGKPEGPPPQGGN 171


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 51/197 (25%), Positives = 65/197 (32%), Gaps = 29/197 (14%)

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
           P  G    GP P P  P  P    G +  G        PP    P   PP+  N      
Sbjct: 185 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDNKSQSAR 236

Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
           +     +G              G NQ +   PP PP  P+    +   K        PP 
Sbjct: 237 SPPGKPQG----------PPPQGGNQPQG--PPPPPGKPQGPPPQGGNKPQG-----PPP 279

Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSR 240
           P   +  P   G   R  R+  G+ +G  PP +   Q  GP   PG   GPP     + +
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 337

Query: 241 GSGRPPDSAGAAGTGGS 257
           G   P    G    GGS
Sbjct: 338 GPPPPGKPQGPPPQGGS 354



 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 49/186 (26%), Positives = 64/186 (34%), Gaps = 32/186 (17%)

Query: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
           P  G    GP P P  P  P    G +  G        PP    P   PP+   + +P +
Sbjct: 62  PQGGNQPQGPPPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDKSRSPRS 113

Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
                  G   G          G NQ +   PP PP  P+    +   K        PP 
Sbjct: 114 PP-----GKPQGPPPQ------GGNQPQG--PPPPPGKPQGPPPQGGNKPQG-----PPP 155

Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSR 240
           P   +  P       R  R+  G+ +G  PP +   Q  GP   PG   GPP    G ++
Sbjct: 156 PGKPQGPPPQGDNKSRSSRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPP--QGGNK 211

Query: 241 GSGRPP 246
             G PP
Sbjct: 212 PQGPPP 217


>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
           sapiens]
          Length = 331

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 69/241 (28%), Positives = 91/241 (37%), Gaps = 42/241 (17%)

Query: 34  ETQPLGAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGH 93
           ETQ   A +TP      +V    ++  G  +  RPK      PAA   P     R  AG 
Sbjct: 29  ETQEDRASATPRLADSGSVPHDSQVAEGPSVDTRPKK-MEKEPAARGTPGTGKERLKAGA 87

Query: 94  VAR-------ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLL-- 144
             R       A  +PP  P   P PP A + E PW   S LN+     +   L+G     
Sbjct: 88  SPRSVPARKKAQTAPPLQP---PPPPPALSEELPWGDLS-LNKCLVLASLVALLGSAFQL 143

Query: 145 --------GANQKRQRMPPLPPSS----PKARMERASRKLPSRVNSRPPHP-APTRPTPR 191
                    A Q R   P +PPSS    P + + +   + P    S PP P A     P+
Sbjct: 144 CRDAVPGEAALQARVPEPWVPPSSAPREPSSPLPKFEAQAPP---SAPPAPRAEAEVRPK 200

Query: 192 VQG------GFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRP-GPGPPALRSGRSRGSGR 244
           + G          EP  A G+    +   R+ L D GP+ RP   G P  R  + R   R
Sbjct: 201 IPGSREAAENDEEEPGEATGEA---VREDRVTLADRGPKERPRREGKP--RKEKPRKEER 255

Query: 245 P 245
           P
Sbjct: 256 P 256


>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 9/155 (5%)

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
           LP    +  P P PT P  R      RE      + RG  P     L   GP   P P  
Sbjct: 200 LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259

Query: 232 PALRSGRSRGS--GRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
           P LR GR+ GS  GR P          SG A    G        A S+ P         C
Sbjct: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCATV--GLRRGDCDRAGSSQPPATSGNGERC 317

Query: 290 GWAELLEREAGGSD-----TGHLPLGNEGGRGEGE 319
            +     R  GG +       H P    G R + E
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352



 Score = 35.4 bits (80), Expect = 0.068
 Identities = 53/199 (26%), Positives = 66/199 (33%), Gaps = 42/199 (21%)

Query: 66  GRPK---------AGPSPSP---AAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPR 113
           GRPK         A P+P P   A P RP     R      A +  S PA P   P P  
Sbjct: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGP 251

Query: 114 ARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERAS--RK 171
           A +   P              A  L  GR  G+   R+  P  P ++ ++        R 
Sbjct: 252 AHSPAPP--------------APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRG 297

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--- 228
              R  S  P PA +    R +    R  R   G+G G            GP   PG   
Sbjct: 298 DCDRAGSSQP-PATSGNGERCRFCRRRRRRGGGGEGEG-------THATHGPASPPGRRH 349

Query: 229 ---PGPPALRSGRSRGSGR 244
               G   LR+G   GS R
Sbjct: 350 DEEVGAAVLRAGSGEGSRR 368


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 65/234 (27%), Positives = 85/234 (36%), Gaps = 20/234 (8%)

Query: 37  PLGAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPAAPTRPRLLHG-RRSAGHVA 95
           PL + S+       + SA     LGL +  R  +  S          + HG  +SAG  A
Sbjct: 21  PLASSSSRSAAAPSSSSAQSGPELGLSLGPRLPSASSKLRVFTGYFSVPHGVGKSAGAAA 80

Query: 96  --------RADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGAN 147
                   +A  + PAG +       AR     W    L  R     A      R L   
Sbjct: 81  GEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGGASRPLAGE 140

Query: 148 QKRQ---RMPPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAA 204
             R+   R P   P   +AR  R++     RV++ P  PA   P  R Q        A  
Sbjct: 141 PWREAARRRPQQCPQWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGG 200

Query: 205 GQGRG---WLPPCRLRLQDSG--PRRRPGPGPPALRSGRSRGSGRPPDSAGAAG 253
           G  R     +PPCR      G   RR  G GP   R+ R +   RPP +A AAG
Sbjct: 201 GGARAEPPRVPPCRPAGCSGGNRSRRAAGAGP---RTTRRKPPPRPPGTAPAAG 251


>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 9/155 (5%)

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
           LP    +  P P PT P  R      RE      + RG  P     L   GP   P P  
Sbjct: 200 LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259

Query: 232 PALRSGRSRGS--GRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
           P LR GR+ GS  GR P          SG A    G        A S+ P         C
Sbjct: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCATV--GLRRGDCDRAGSSQPPATSGNGERC 317

Query: 290 GWAELLEREAGGSD-----TGHLPLGNEGGRGEGE 319
            +     R  GG +       H P    G R + E
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352



 Score = 35.4 bits (80), Expect = 0.068
 Identities = 53/199 (26%), Positives = 66/199 (33%), Gaps = 42/199 (21%)

Query: 66  GRPK---------AGPSPSP---AAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPR 113
           GRPK         A P+P P   A P RP     R      A +  S PA P   P P  
Sbjct: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGP 251

Query: 114 ARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERAS--RK 171
           A +   P              A  L  GR  G+   R+  P  P ++ ++        R 
Sbjct: 252 AHSPAPP--------------APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRG 297

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--- 228
              R  S  P PA +    R +    R  R   G+G G            GP   PG   
Sbjct: 298 DCDRAGSSQP-PATSGNGERCRFCRRRRRRGGGGEGEG-------THATHGPASPPGRRH 349

Query: 229 ---PGPPALRSGRSRGSGR 244
               G   LR+G   GS R
Sbjct: 350 DEEVGAAVLRAGSGEGSRR 368


>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 9/155 (5%)

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
           LP    +  P P PT P  R      RE      + RG  P     L   GP   P P  
Sbjct: 200 LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259

Query: 232 PALRSGRSRGS--GRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
           P LR GR+ GS  GR P          SG A    G        A S+ P         C
Sbjct: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCATV--GLRRGDCDRAGSSQPPATSGNGERC 317

Query: 290 GWAELLEREAGGSD-----TGHLPLGNEGGRGEGE 319
            +     R  GG +       H P    G R + E
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352



 Score = 35.4 bits (80), Expect = 0.068
 Identities = 53/199 (26%), Positives = 66/199 (33%), Gaps = 42/199 (21%)

Query: 66  GRPK---------AGPSPSP---AAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPR 113
           GRPK         A P+P P   A P RP     R      A +  S PA P   P P  
Sbjct: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGP 251

Query: 114 ARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERAS--RK 171
           A +   P              A  L  GR  G+   R+  P  P ++ ++        R 
Sbjct: 252 AHSPAPP--------------APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRG 297

Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--- 228
              R  S  P PA +    R +    R  R   G+G G            GP   PG   
Sbjct: 298 DCDRAGSSQP-PATSGNGERCRFCRRRRRRGGGGEGEG-------THATHGPASPPGRRH 349

Query: 229 ---PGPPALRSGRSRGSGR 244
               G   LR+G   GS R
Sbjct: 350 DEEVGAAVLRAGSGEGSRR 368


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 64/263 (24%), Positives = 87/263 (33%), Gaps = 55/263 (20%)

Query: 67  RPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSP--PAGPVPAPTPPRARNAETPWNAA 124
           RP  G  P    P  P      +S+ H   +   P  P  P P PTPP       P+   
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP-------PFPG- 224

Query: 125 SLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA----------------RMERA 168
              NRG   G  ++    L  ++    R PPLPP+  +A                 + R 
Sbjct: 225 ---NRGTALGGGSIRQSPLSSSSPFSNR-PPLPPTPSRALDDKPPPPPPPVGNRPSIHRE 280

Query: 169 SRKLPSRVNSRPPHPAPTRPT-----------PRVQGGFGREPRAAAGQGRGWLPPCRLR 217
           +   P   N++PP P+  RP+           P   G     P ++       LP   L 
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS 340

Query: 218 LQDSGPRRRPGPG-------------PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALR 264
           L  S P   P PG             PP +R    R    PP    +     S    A  
Sbjct: 341 LSSSTP-PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399

Query: 265 GWPAPSSFAASSALPEECLPPRR 287
             P+ S   +  + P   LPP R
Sbjct: 400 QLPSRSGVDSPRSGPRPPLPPDR 422



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 69/243 (28%), Positives = 80/243 (32%), Gaps = 47/243 (19%)

Query: 29  QLQPNETQPL--GAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPA---APTRPR 83
           Q  P  T P   G   T  GG     S    L    P + RP   P+PS A    P  P 
Sbjct: 212 QPSPGPTPPPFPGNRGTALGGGSIRQSP---LSSSSPFSNRPPLPPTPSRALDDKPPPPP 268

Query: 84  LLHGRRSAGHVARADVSPPAG---PVPA-PTPPRARNAETPWNAASLLNRGCCWGAAALL 139
              G R + H       PP     PVP+ P P  +  A  P    S              
Sbjct: 269 PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS-------------- 314

Query: 140 IGRLLGANQKRQRMPPLPPSSP-KARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGR 198
                     R   PPLPPSS       R  ++  S  +S PP P+P R  P       R
Sbjct: 315 ----------RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364

Query: 199 EP---RAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSG--RSRGSGRPP-----DS 248
            P   R   G+     PP  +    S  R  P       RSG    R   RPP      S
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424

Query: 249 AGA 251
           AGA
Sbjct: 425 AGA 427



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 47/164 (28%), Positives = 58/164 (35%), Gaps = 30/164 (18%)

Query: 63  PIAGRP----KAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRAR-NA 117
           P+  RP    +A P P P     P     R SA   A     PP+ P P P PP +  N 
Sbjct: 270 PVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGND 329

Query: 118 ETPWNAASLLNRGCCWGAAALLI------GRLLGANQKRQRMP---------PLPPSSPK 162
           ETP     L  R     ++   +      G L     +R   P         PLPP  P 
Sbjct: 330 ETP----RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPV 385

Query: 163 ARMERASR------KLPSRVNSRPPHPAPTRPTPRVQGGFGREP 200
           +R    SR      +LPSR     P   P  P P  +   G  P
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 64/263 (24%), Positives = 87/263 (33%), Gaps = 55/263 (20%)

Query: 67  RPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSP--PAGPVPAPTPPRARNAETPWNAA 124
           RP  G  P    P  P      +S+ H   +   P  P  P P PTPP       P+   
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP-------PFPG- 224

Query: 125 SLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA----------------RMERA 168
              NRG   G  ++    L  ++    R PPLPP+  +A                 + R 
Sbjct: 225 ---NRGTALGGGSIRQSPLSSSSPFSNR-PPLPPTPSRALDDKPPPPPPPVGNRPSIHRE 280

Query: 169 SRKLPSRVNSRPPHPAPTRPT-----------PRVQGGFGREPRAAAGQGRGWLPPCRLR 217
           +   P   N++PP P+  RP+           P   G     P ++       LP   L 
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS 340

Query: 218 LQDSGPRRRPGPG-------------PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALR 264
           L  S P   P PG             PP +R    R    PP    +     S    A  
Sbjct: 341 LSSSTP-PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399

Query: 265 GWPAPSSFAASSALPEECLPPRR 287
             P+ S   +  + P   LPP R
Sbjct: 400 QLPSRSGVDSPRSGPRPPLPPDR 422



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 69/243 (28%), Positives = 80/243 (32%), Gaps = 47/243 (19%)

Query: 29  QLQPNETQPL--GAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPA---APTRPR 83
           Q  P  T P   G   T  GG     S    L    P + RP   P+PS A    P  P 
Sbjct: 212 QPSPGPTPPPFPGNRGTALGGGSIRQSP---LSSSSPFSNRPPLPPTPSRALDDKPPPPP 268

Query: 84  LLHGRRSAGHVARADVSPPAG---PVPA-PTPPRARNAETPWNAASLLNRGCCWGAAALL 139
              G R + H       PP     PVP+ P P  +  A  P    S              
Sbjct: 269 PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS-------------- 314

Query: 140 IGRLLGANQKRQRMPPLPPSSP-KARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGR 198
                     R   PPLPPSS       R  ++  S  +S PP P+P R  P       R
Sbjct: 315 ----------RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364

Query: 199 EP---RAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSG--RSRGSGRPP-----DS 248
            P   R   G+     PP  +    S  R  P       RSG    R   RPP      S
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424

Query: 249 AGA 251
           AGA
Sbjct: 425 AGA 427



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 47/164 (28%), Positives = 58/164 (35%), Gaps = 30/164 (18%)

Query: 63  PIAGRP----KAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRAR-NA 117
           P+  RP    +A P P P     P     R SA   A     PP+ P P P PP +  N 
Sbjct: 270 PVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGND 329

Query: 118 ETPWNAASLLNRGCCWGAAALLI------GRLLGANQKRQRMP---------PLPPSSPK 162
           ETP     L  R     ++   +      G L     +R   P         PLPP  P 
Sbjct: 330 ETP----RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPV 385

Query: 163 ARMERASR------KLPSRVNSRPPHPAPTRPTPRVQGGFGREP 200
           +R    SR      +LPSR     P   P  P P  +   G  P
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429


>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
          Length = 1397

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 54/200 (27%), Positives = 76/200 (38%), Gaps = 36/200 (18%)

Query: 56   HRLGLGLPIAG---RPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPP 112
            H+ G G    G   RP+ GP P   AP  P    GR          +SPPA P   P   
Sbjct: 1104 HKPGAGATAPGTQERPQ-GPLPGAVAPEAP----GR----------LSPPAAPEERPAAD 1148

Query: 113  RARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKL 172
              R+  + ++  S ++R  C GA+    G    A+ +R  +  +   +  A       +L
Sbjct: 1149 -TRSIVSGYSTLSTMDRSVCSGASGRRAGAGDEADDERSELSHVETDTEGAAGAGPGGRL 1207

Query: 173  PSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPP 232
              R +    H  P     R +   GR     AG+G              GPR    P PP
Sbjct: 1208 TRRPSFSSHHLMPCDTLARRRLARGRPDGEGAGRG--------------GPR---APEPP 1250

Query: 233  ALRSGRSRGSGRPPDSAGAA 252
               S  S+ S RPP +A A+
Sbjct: 1251 GSASSSSQESLRPPAAALAS 1270


>gi|239748337 PREDICTED: hypothetical protein XP_002346632 [Homo
           sapiens]
          Length = 189

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 43/116 (37%), Positives = 50/116 (43%), Gaps = 20/116 (17%)

Query: 220 DSGPRRRPG-PGPPALRSGRSRGSGRPPDSAGAAGTG---GSGWAAALRG-------WPA 268
           ++GPRRRP  PG    R+ R  G  R   SA  AG G   GSG     RG       W  
Sbjct: 53  ETGPRRRPFLPGVAHPRTHRQTGPARVTRSA-KAGYGLRVGSGPYGRPRGNAGQEKVWEK 111

Query: 269 PSSFAASSALPEECLPPRRGCGWAELLEREAGGSDTGHLPLGNE----GGRGEGEG 320
           P+S A++S  P E  P R G G      R   G D   L  G +     G G GEG
Sbjct: 112 PASEASASGRPPELAPARSGAGQG----RRPNGGDRQGLGAGRDKHTTDGAGPGEG 163


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.135    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,063,143
Number of Sequences: 37866
Number of extensions: 1392965
Number of successful extensions: 12798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 1428
Number of HSP's that attempted gapping in prelim test: 8856
Number of HSP's gapped (non-prelim): 4535
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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