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Search of human proteins with 239742939
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
(321 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 674 0.0
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 674 0.0
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 674 0.0
gi|110832843 TBP-associated factor 4 [Homo sapiens] 58 1e-08
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 55 6e-08
gi|18079216 CASK interacting protein 1 [Homo sapiens] 55 8e-08
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 54 1e-07
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 52 7e-07
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 52 7e-07
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 50 2e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 50 4e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 49 5e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 49 8e-06
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 48 1e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 48 1e-05
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 48 1e-05
gi|171543895 ataxin 2 [Homo sapiens] 47 2e-05
gi|40353727 synaptopodin isoform A [Homo sapiens] 47 2e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 47 2e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 47 3e-05
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa... 46 4e-05
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 46 5e-05
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 46 5e-05
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 46 5e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 46 5e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 46 5e-05
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 45 7e-05
gi|239748337 PREDICTED: hypothetical protein XP_002346632 [Homo ... 45 7e-05
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 674 bits (1740), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL
Sbjct: 1 MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP
Sbjct: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP
Sbjct: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR
Sbjct: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG
Sbjct: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
Query: 301 GSDTGHLPLGNEGGRGEGEGE 321
GSDTGHLPLGNEGGRGEGEGE
Sbjct: 301 GSDTGHLPLGNEGGRGEGEGE 321
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 674 bits (1740), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL
Sbjct: 1 MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP
Sbjct: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP
Sbjct: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR
Sbjct: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG
Sbjct: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
Query: 301 GSDTGHLPLGNEGGRGEGEGE 321
GSDTGHLPLGNEGGRGEGEGE
Sbjct: 301 GSDTGHLPLGNEGGRGEGEGE 321
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 674 bits (1740), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL
Sbjct: 1 MEKRKVRPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGL 60
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP
Sbjct: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP
Sbjct: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR
Sbjct: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG
Sbjct: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAG 300
Query: 301 GSDTGHLPLGNEGGRGEGEGE 321
GSDTGHLPLGNEGGRGEGEGE
Sbjct: 301 GSDTGHLPLGNEGGRGEGEGE 321
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 57.8 bits (138), Expect = 1e-08
Identities = 73/244 (29%), Positives = 89/244 (36%), Gaps = 47/244 (19%)
Query: 62 LPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPW 121
+P A AGP P+PA P +P A ARA P GP P P P + A
Sbjct: 140 VPAAAAVAAGPEPAPAGPAKP-----AGPAALAARAGPGPGPGPGPGPGPGPGKPAGP-- 192
Query: 122 NAASLLNRGCCWGAAALLIGRLLGA------NQKRQRMPPLP-PSSPKARMERASRKLPS 174
AA LN G+AALL A N + PLP P++P ++ P
Sbjct: 193 GAAQTLN-----GSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ-----TPP 242
Query: 175 RVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLP------PCRLRLQDSGPRRRPG 228
V + P PAP P+P P A A P P L P P
Sbjct: 243 FVGAAAP-PAPAAPSP---------PAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPT 292
Query: 229 -----PGPPALRSGRSRGSGRPPDSA--GAAGTGGSGWAAALRGWPAPSSFAASSALPEE 281
P P A ++G S G+ P A G AG G A PAP A S +
Sbjct: 293 AAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQ 352
Query: 282 CLPP 285
PP
Sbjct: 353 AAPP 356
Score = 38.9 bits (89), Expect = 0.006
Identities = 59/228 (25%), Positives = 75/228 (32%), Gaps = 25/228 (10%)
Query: 59 GLGLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGP-VPA-PTPPRARN 116
G P G P A P P PA RP G R P P VPA P PP A+
Sbjct: 74 GPAAPAEGAPGAAPEPPPAGRARP-------GGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
Query: 117 AETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRV 176
P +A G C A + + A + P P+ P A RA P
Sbjct: 127 RPPPEGSA-----GSC---APVPAAAAVAAGPEPAPAGPAKPAGPAALAARAG---PGPG 175
Query: 177 NSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRR---RPGPGPP- 232
P P P P G +AA + L ++GP P P P
Sbjct: 176 PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG 235
Query: 233 -ALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALP 279
+++ G+ PP A + AA P P A+ A P
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP 283
Score = 33.1 bits (74), Expect = 0.34
Identities = 38/146 (26%), Positives = 47/146 (32%), Gaps = 26/146 (17%)
Query: 156 LPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCR 215
L P +P+ R A V+ P A P +G G P P R
Sbjct: 43 LAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPP--------PAGR 94
Query: 216 LRLQDSGPRR-------RP----GPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALR 264
R GP+R RP GP PPA + RPP A AAA+
Sbjct: 95 ARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL-------RPPPEGSAGSCAPVPAAAAVA 147
Query: 265 GWPAPSSFAASSALPEECLPPRRGCG 290
P P+ + L R G G
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPG 173
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 55.5 bits (132), Expect = 6e-08
Identities = 77/269 (28%), Positives = 100/269 (37%), Gaps = 63/269 (23%)
Query: 14 PTGLRVPHRAPHILAQ-------LQPNETQPLGAHSTPYGGTLE-----AVSAFHRLGLG 61
PT L P RA Q L+ P G S P GG A +A H+LG G
Sbjct: 159 PTSLGFPARAGQGQVQGAAPGRRLRGEPKTPPG-RSGPSGGVRSGAGHRAATAEHQLGAG 217
Query: 62 LPIA---GRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTP------- 111
+ G P P P P RP H S G PP+ +P P P
Sbjct: 218 FSVRNGPGPPARLPPAPPGPPLRPARPHNPTSRGPGRLLTCEPPSRKLPPPLPLCRSRWV 277
Query: 112 --------PRARNAETPWN-AASLLNRGCCWGA--AALLIGRLLGANQKRQRMPPLPPSS 160
PR R P+ +L RG + +A+L+ R+ G + L PSS
Sbjct: 278 LAPPPTVRPRLRVLTPPFTLLCALPERGSRTPSTRSAVLVDRVAGLGTEL----TLTPSS 333
Query: 161 PKAR----MERASRKLPSRV------NSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGW 210
+A + + P+R RPP P+ P+P+ QG R+PR
Sbjct: 334 RRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRL-------- 385
Query: 211 LPPCRLRLQDSGPRRR---PGPGP-PALR 235
R L PR R PGPGP PAL+
Sbjct: 386 ---LRAALALGAPRGRTPSPGPGPAPALQ 411
Score = 30.4 bits (67), Expect = 2.2
Identities = 50/188 (26%), Positives = 67/188 (35%), Gaps = 37/188 (19%)
Query: 104 GPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA 163
G +P P R+ +P G L +G +R +P P +P
Sbjct: 76 GALPPDRSPTPRSRVSP-------------GVTGLAVGPGNPKRCQRSGVPYEGPGAPGG 122
Query: 164 RMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGP 223
+ R SR +R P TRP GRE A G+ R P LR G
Sbjct: 123 QQLRKSR-------ARLPR---TRP--------GREDAAVRGRNRDPAEPGSLRPTSLGF 164
Query: 224 RRRPGPG--PPALRSGRSRGSGR-PPDSAGAAG--TGGSGWAAALRGWPAPSSFAASSAL 278
R G G A R RG + PP +G +G G+G AA + F+ +
Sbjct: 165 PARAGQGQVQGAAPGRRLRGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGP 224
Query: 279 -PEECLPP 285
P LPP
Sbjct: 225 GPPARLPP 232
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 55.1 bits (131), Expect = 8e-08
Identities = 66/229 (28%), Positives = 85/229 (37%), Gaps = 39/229 (17%)
Query: 65 AGRPKAGPSPSPAAPTRPRLLH--GRRSAGHVARADVSPPAGPVPAPTP--PRARNAETP 120
AG P+ P P PA P L H AR PP P P T P+ + + TP
Sbjct: 1186 AGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTP 1245
Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
+ L G + + R G PP PP++PK +A LPS S
Sbjct: 1246 TSKKVPLP-----GPGSPEVKRAHGTPPPVSPKPPPPPTAPKP--VKAVAGLPS--GSAG 1296
Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
P PAP+ R+P AA + G P + P + P PG PAL
Sbjct: 1297 PSPAPSP---------ARQPPAALAKPPGTPPSL-----GASPAKPPSPGAPALHV---- 1338
Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
+PP +A AA AAA PAP A+ + L C
Sbjct: 1339 -PAKPPRAAAAA-------AAAAAAPPAPPEGASPGDSARQKLEETSAC 1379
Score = 37.4 bits (85), Expect = 0.018
Identities = 64/229 (27%), Positives = 84/229 (36%), Gaps = 40/229 (17%)
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
P +P + P+P A TR G R A H++ + GP P P+ P +R+ E
Sbjct: 673 PTTEKPSSHLPPTPRATTRQDSSLGGR-ARHMSSSQELLGDGP-PGPSSPMSRSQEY--- 727
Query: 123 AASLLNRGCCWGAAALLI--GRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
LL+ G G GR G + KR +PP+P + S P P
Sbjct: 728 ---LLDEGPAPGTPPREARPGRH-GHSIKRASVPPVPGKPRQVLPPGTSHFTP------P 777
Query: 181 PHPAPTRP-TPRVQGG-FGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGR 238
P TRP +P+ GG G P A + L P P RP +S
Sbjct: 778 QTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLP---------PTERPMSPRSLPQSPT 828
Query: 239 SRGSGR--PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
RG P G G G PAP +A+P CLPP
Sbjct: 829 HRGFAYVLPQPVEGEVGPAAPG--------PAPPP--VPTAVPTLCLPP 867
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 54.3 bits (129), Expect = 1e-07
Identities = 80/270 (29%), Positives = 102/270 (37%), Gaps = 28/270 (10%)
Query: 8 PEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGLGLPIAGR 67
P A P L P R P + + E A +T G L A+ RLG +P+ R
Sbjct: 38 PTARAPPPILPAPQRPP---TRAREWEGAAWAAGATGVGAALLALPGSRRLGR-VPLTFR 93
Query: 68 PKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAP--TPPRARNAET--PWNA 123
+A P P+P AP R R GR RA S P A PPR R+ P +
Sbjct: 94 -EASPGPAPGAP-RARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSV 151
Query: 124 ASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH- 182
S + R + +R+ +P PP P+ R SR P
Sbjct: 152 GSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSL 211
Query: 183 -PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDS---GPRRRPGPGPPALRSGR 238
P P R R + R+ AG G LP R + G RRR G +R GR
Sbjct: 212 SPFPRRCRRRAE-------RSPAGHG---LPLPRSLSRGGEVVGARRRRGGEERRVR-GR 260
Query: 239 SRGS--GRPPDSAGAAGTGGSGWAAALRGW 266
+G G PP AG A G +G A R W
Sbjct: 261 RQGCALGSPPIPAGPAAPGRAGERRAARQW 290
Score = 31.6 bits (70), Expect = 0.99
Identities = 55/225 (24%), Positives = 74/225 (32%), Gaps = 20/225 (8%)
Query: 8 PEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTL----EAVSAFHRLG-LGL 62
P G R P +P + E P G H P +L E V A R G
Sbjct: 197 PRLAAPLAGSRAPSLSPFPRRCRRRAERSPAG-HGLPLPRSLSRGGEVVGARRRRGGEER 255
Query: 63 PIAGRPKA---GPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGP--------VPAPTP 111
+ GR + G P PA P P RR+A + P P V
Sbjct: 256 RVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVT 315
Query: 112 PRARNAETPWNAASLLNRGCCWGAAALLIG-RLLGANQKRQRMPPLPPSSPKARMERASR 170
PRAR + T + +G A G RL + + + +P +S +SR
Sbjct: 316 PRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSR 375
Query: 171 --KLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPP 213
K PS P PA + + G G + W PP
Sbjct: 376 RTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPP 420
Score = 30.8 bits (68), Expect = 1.7
Identities = 46/160 (28%), Positives = 58/160 (36%), Gaps = 20/160 (12%)
Query: 148 QKRQRMPPLP----PSSPKARMERASRKLP-----SRVNSRPPH--PAPTRPTPRVQGGF 196
++ QR P P P P+ + P S PP PAP RP R +
Sbjct: 2 ERGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWE 61
Query: 197 GREPRAAA---GQGRGWLPPCRL--RLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGA 251
G A A G LP R R+ + PGP P A R+ S G P A
Sbjct: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRA 121
Query: 252 AGTGGSGWAAALRGWPAPSSFAASSALPE---ECLPPRRG 288
+ G AAA R P P + + LP C+ P G
Sbjct: 122 PSSAGKRPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVG 160
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 52.0 bits (123), Expect = 7e-07
Identities = 63/242 (26%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRL--LHGRRSAGHVARADVSPPAGPVPAPTPPRARNAE 118
GL ++ P+ P P T+P++ +HG+ SA RA PP G AP+P + +
Sbjct: 647 GLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTP 706
Query: 119 TPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMP-PLPPSSPKARMERASRKLPSRVN 177
+ +A ++ + R R P P PP P+ E + PS
Sbjct: 707 SDKSAHTVEH------------------GSPRTRDPTPRPPGLPE---EATALAAPS--- 742
Query: 178 SRPPHPAPTRPTPRVQGGFGREPRAA---------AGQGRG---WLPPCRLRLQDSGPRR 225
P A R PR G GR A A RG L + L GPR
Sbjct: 743 ---PPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPRE 799
Query: 226 RPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
+P P A RS R P + T G A PAP + + + + PP
Sbjct: 800 KPAPPQKAKRSVPPASPARAPPA-----TETPGPEKAATDLPAPETPRKKTPIQK---PP 851
Query: 286 RR 287
R+
Sbjct: 852 RK 853
Score = 34.7 bits (78), Expect = 0.12
Identities = 57/216 (26%), Positives = 76/216 (35%), Gaps = 33/216 (15%)
Query: 100 SPPAGPVPAPTPPRARNA-ETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPP 158
+P PVP TP A A P ++ S + G L R+ +R+ P
Sbjct: 587 APAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVA----RREARPA--- 639
Query: 159 SSPKARMERASRKL-PSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPP---- 213
+AR E L PS +PP P P P+V G+ AAAG+ PP
Sbjct: 640 ---RARGEIGGLSLSPSPERRKPPPPDPATK-PKVSWIHGKHSAAAAGRAPSPPPPGSEA 695
Query: 214 --------------CRLRLQDSGPRRR-PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
++ PR R P P PP L + + P A A
Sbjct: 696 APSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPL 755
Query: 259 WAAALRGWPAPSSFAASSALPEECLPPRRGCGWAEL 294
A R PA + AA S L + R G AE+
Sbjct: 756 GAHGRRRSPAKRAEAA-SMLAADVRGKTRSLGRAEV 790
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 52.0 bits (123), Expect = 7e-07
Identities = 63/242 (26%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRL--LHGRRSAGHVARADVSPPAGPVPAPTPPRARNAE 118
GL ++ P+ P P T+P++ +HG+ SA RA PP G AP+P + +
Sbjct: 642 GLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTP 701
Query: 119 TPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMP-PLPPSSPKARMERASRKLPSRVN 177
+ +A ++ + R R P P PP P+ E + PS
Sbjct: 702 SDKSAHTVEH------------------GSPRTRDPTPRPPGLPE---EATALAAPS--- 737
Query: 178 SRPPHPAPTRPTPRVQGGFGREPRAA---------AGQGRG---WLPPCRLRLQDSGPRR 225
P A R PR G GR A A RG L + L GPR
Sbjct: 738 ---PPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPRE 794
Query: 226 RPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
+P P A RS R P + T G A PAP + + + + PP
Sbjct: 795 KPAPPQKAKRSVPPASPARAPPA-----TETPGPEKAATDLPAPETPRKKTPIQK---PP 846
Query: 286 RR 287
R+
Sbjct: 847 RK 848
Score = 34.7 bits (78), Expect = 0.12
Identities = 57/216 (26%), Positives = 76/216 (35%), Gaps = 33/216 (15%)
Query: 100 SPPAGPVPAPTPPRARNA-ETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPP 158
+P PVP TP A A P ++ S + G L R+ +R+ P
Sbjct: 582 APAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVA----RREARPA--- 634
Query: 159 SSPKARMERASRKL-PSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPP---- 213
+AR E L PS +PP P P P+V G+ AAAG+ PP
Sbjct: 635 ---RARGEIGGLSLSPSPERRKPPPPDPATK-PKVSWIHGKHSAAAAGRAPSPPPPGSEA 690
Query: 214 --------------CRLRLQDSGPRRR-PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
++ PR R P P PP L + + P A A
Sbjct: 691 APSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPL 750
Query: 259 WAAALRGWPAPSSFAASSALPEECLPPRRGCGWAEL 294
A R PA + AA S L + R G AE+
Sbjct: 751 GAHGRRRSPAKRAEAA-SMLAADVRGKTRSLGRAEV 785
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 50.4 bits (119), Expect = 2e-06
Identities = 56/172 (32%), Positives = 63/172 (36%), Gaps = 40/172 (23%)
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
LP + P P PT P RV REP A G R RL+ R P PGP
Sbjct: 200 LPQETAAPAPQPGPTAPPARV-----REPGRAEGASR------EPRLRSRAARPPPAPGP 248
Query: 232 PAL-RSGRSRGSGRP--------PDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282
AL R+ RSR +GRP +A A GG G G AP S A A
Sbjct: 249 GALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAW---- 304
Query: 283 LPPRRGCGWAELL--EREAGGSDTGHLPLGN------------EGGRGEGEG 320
GC L + + GS GN GG GEGEG
Sbjct: 305 --GLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEG 354
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 50.4 bits (119), Expect = 2e-06
Identities = 70/229 (30%), Positives = 87/229 (37%), Gaps = 65/229 (28%)
Query: 65 AGRPKAGP-SPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWNA 123
A P++GP SP+PAAP +P A ++PP TPPR R+ TP +
Sbjct: 452 AAPPRSGPQSPAPAAPAQPG-------------ATLAPP-------TPPRPRDGGTPRH- 490
Query: 124 ASLLNRGCCWGAAA-----LLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNS 178
+R W A A L +GR A R + PP R+ R +
Sbjct: 491 ----SRALSWAARAARPLPLFLGR---APPPRPAVEQPPPKVYVTRVRPGQR-------A 536
Query: 179 RPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPR---RRPGPGPPALR 235
P PAP P P G F PR LP +LR PR RR G GP A +
Sbjct: 537 SPRAPAPRAPWPPFPGVF-LHPRP--------LPRVQLRAPPRPPRPHGRRTG-GPQATQ 586
Query: 236 SGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLP 284
RPP A A G G A L P++ S L E P
Sbjct: 587 P-------RPPARAQATQGGREGQARTL----GPAAPTVDSNLSSEARP 624
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 49.7 bits (117), Expect = 4e-06
Identities = 54/197 (27%), Positives = 69/197 (35%), Gaps = 31/197 (15%)
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
P G GP P P P P G R G PP P PP+ + +P +
Sbjct: 102 PQGGNQPQGPPPPPGKPQGPPPQGGNRPQG--------PPPPGKPQGPPPQGDKSRSPRS 153
Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
G G G NQ + PP PP P+ + +K PP
Sbjct: 154 PP-----GKPQGPPPQ------GGNQPQG--PPPPPGKPQGPPPQGGKK----PQGPPPP 196
Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGP--GPPALRSGRSR 240
P P P QG R ++ G+ +G PP + Q GP PG GPP + +
Sbjct: 197 GKPQGPPP--QGDKSRSSQSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 252
Query: 241 GSGRPPDSAGAAGTGGS 257
G P G GGS
Sbjct: 253 GPPPPGKPQGPPAQGGS 269
Score = 48.5 bits (114), Expect = 8e-06
Identities = 53/186 (28%), Positives = 67/186 (36%), Gaps = 33/186 (17%)
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
P G GP P P P P G + G PP P PP+ + +P +
Sbjct: 41 PQGGNKPQGPPPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDKSRSPRS 92
Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
G G G NQ + PP PP P+ + +R PP
Sbjct: 93 PP-----GKPQGPPP------QGGNQPQG--PPPPPGKPQGPPPQGG----NRPQGPPPP 135
Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSR 240
P P P QG R PR+ G+ +G PP + Q GP PG GPP G +
Sbjct: 136 GKPQGPPP--QGDKSRSPRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPP--QGGKK 189
Query: 241 GSGRPP 246
G PP
Sbjct: 190 PQGPPP 195
Score = 39.3 bits (90), Expect = 0.005
Identities = 59/246 (23%), Positives = 82/246 (33%), Gaps = 55/246 (22%)
Query: 63 PIAGRPKAGPSPS----PAAPTRPRLLHGRRSAGHVARADVSPPA---GPVP-------A 108
P G+P+ GP P P P P G G +R+ SPP GP P
Sbjct: 113 PPPGKPQ-GPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 171
Query: 109 PTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARME-- 166
P PP + P G + + PP P P + +
Sbjct: 172 PPPPPGKPQGPPPQ----------------------GGKKPQGPPPPGKPQGPPPQGDKS 209
Query: 167 RASRKLPSRVNSRPPH---------PAPTRPT-PRVQGGFGREPRAAAGQGRGWLPPCRL 216
R+S+ P + PP P P +P P QGG +P+ G+ PP +
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG--NKPQGPPPPGKPQGPPAQG 267
Query: 217 RLQDSGPRRRPGP--GPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAA 274
+ R PG GPP +G PP + G + A +G P P
Sbjct: 268 GSKSQSARSPPGKPQGPPQQEGNNPQGP--PPPAGGNPQQPQAPPAGQPQGPPRPPQGGR 325
Query: 275 SSALPE 280
S P+
Sbjct: 326 PSRPPQ 331
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 49.3 bits (116), Expect = 5e-06
Identities = 63/243 (25%), Positives = 79/243 (32%), Gaps = 68/243 (27%)
Query: 7 RPEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHST----PYGGTLEAVSAFHRLGLGL 62
+PE GR P G P R P + P P G + + P G E
Sbjct: 35 KPE-GRRPQGGNQPQRPPPPPGK--PQGPPPQGGNQSQGPPPPPGKPEGRP--------- 82
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
P G GP P P P RP G +S G +PP P PP+
Sbjct: 83 PQGGNQSQGPPPHPGKPERPPPQGGNQSQG-------TPPPPGKPERPPPQ--------- 126
Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
G NQ + PP PP P ER + ++ PPH
Sbjct: 127 ----------------------GGNQSHR--PPPPPGKP----ERPPPQGGNQSQGPPPH 158
Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGS 242
P P +G R R+ G+ +G PP Q G + GP PP G
Sbjct: 159 PGKPEGPPPQEGNKSRSARSPPGKPQG--PP-----QQEG-NKPQGPPPPGKPQGPPPAG 210
Query: 243 GRP 245
G P
Sbjct: 211 GNP 213
Score = 43.1 bits (100), Expect = 3e-04
Identities = 53/194 (27%), Positives = 65/194 (33%), Gaps = 55/194 (28%)
Query: 61 GLPIAGRPKAG-----PSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRAR 115
G P RP+ G P P P P P G +S G P P P P R
Sbjct: 34 GKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQG------------PPPPPGKPEGR 81
Query: 116 NAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSR 175
+ G NQ + PP P P ER + ++
Sbjct: 82 PPQ--------------------------GGNQSQG--PPPHPGKP----ERPPPQGGNQ 109
Query: 176 VNSRPPHPA-PTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGP--GPP 232
PP P P RP P QGG + R G+ PP + Q GP PG GPP
Sbjct: 110 SQGTPPPPGKPERPPP--QGG-NQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPP 166
Query: 233 ALRSGRSRGSGRPP 246
+SR + PP
Sbjct: 167 PQEGNKSRSARSPP 180
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 48.5 bits (114), Expect = 8e-06
Identities = 56/204 (27%), Positives = 73/204 (35%), Gaps = 45/204 (22%)
Query: 87 GRRSAGHVAR-----ADVSPPAGPVP---------APTPP-RARNAETPWNAASLLNRGC 131
G+RS H R + P+ P P APTPP R + + +P +A S RG
Sbjct: 318 GQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRG- 376
Query: 132 CWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPR 191
GR G +R+R + R R+S P R R P PAP R + R
Sbjct: 377 ---------GRAAGGAGRRRRR------RRRRRRSRSSASAPRRRGRRRPRPAPPRGSSR 421
Query: 192 VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGA 251
+ +G GRG P P PG G + + P A
Sbjct: 422 SLSR--ARSSSDSGSGRG------------APGPGPEPGSERGHGGHGKRAKERPPRARP 467
Query: 252 AGTGGSGWAAALRGWPAPSSFAAS 275
A T S A RG P S + S
Sbjct: 468 ASTSPSPGAHGRRGGPEGKSSSRS 491
Score = 33.9 bits (76), Expect = 0.20
Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 14/124 (11%)
Query: 162 KARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDS 221
++R + RK ++ RP +P R + R G P ++ P RL
Sbjct: 225 RSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDS-RSPSRL----- 278
Query: 222 GPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEE 281
P+ R GR GS R S + +GGSGW + R + A P
Sbjct: 279 SPKHRD--------EGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGS 330
Query: 282 CLPP 285
P
Sbjct: 331 AHSP 334
Score = 30.8 bits (68), Expect = 1.7
Identities = 47/183 (25%), Positives = 61/183 (33%), Gaps = 41/183 (22%)
Query: 65 AGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWNAA 124
+GR GP P P + R GH RA PPRAR A T +
Sbjct: 434 SGRGAPGPGPEPGSE--------RGHGGHGKRAK----------ERPPRARPASTSPSPG 475
Query: 125 SLLNRGCCWGAAALLIGRLLGANQKRQRMP-PLPPSSPKARMERASRKLPSRVNSRPPHP 183
+ RG G ++ R P P P S +R SR SR + PH
Sbjct: 476 AHGRRGGPEGKSS-------------SRSPGPHPRSWSSSRSPSKSR---SRSAEKRPHS 519
Query: 184 APTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGP---RRRPGPG---PPALRSG 237
P+P+ ++ A R R + P RRR P P + S
Sbjct: 520 PSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSA 579
Query: 238 RSR 240
R R
Sbjct: 580 RKR 582
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 48.1 bits (113), Expect = 1e-05
Identities = 60/217 (27%), Positives = 79/217 (36%), Gaps = 35/217 (16%)
Query: 85 LHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLL 144
L G R V +P GP PRAR + L+ AA G+ L
Sbjct: 36 LEGARRQRRVGSRQRTP--GPDGQDASPRAREEDGGRERRGGLSHSKDCNAARNARGKHL 93
Query: 145 GANQKRQRM-----PPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGRE 199
++R+ + PP P P+ R + A + +R+ + P P P P
Sbjct: 94 RRTRRRRTLGRRCRPPAPRPRPRPRRKLALDQAATRIPAARPRP----PGP--------- 140
Query: 200 PRAAAGQGRGW-LPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
G+G W + P RL P +P PGPP R + RP G G GG+
Sbjct: 141 ----GGRGSHWKIQPGVQRLPRPTPSAQPRPGPP-----ERRRASRPLIGCGRGG-GGTW 190
Query: 259 WAAALRGWPAP-SSFAAS---SALPEECLPPRRGCGW 291
AA W P F S A P LPP R W
Sbjct: 191 RRAADSRWRRPGGGFQRSRREKARPPRRLPPDRVLSW 227
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 48.1 bits (113), Expect = 1e-05
Identities = 55/228 (24%), Positives = 74/228 (32%), Gaps = 32/228 (14%)
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETP 120
G+P + PK P+P A P P+ S + P P P P + A TP
Sbjct: 929 GIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP 988
Query: 121 WNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
A +G G A GA PP P SP A P
Sbjct: 989 PAATPPSPKG---GPAT---PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP------- 1035
Query: 181 PHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSR 240
PA T P+P+ G +G P L P + GP P+L+ +
Sbjct: 1036 --PAATPPSPK-----GSPAATPLPKGAPTTPAATL------PSPKGGPATPSLKGAPTP 1082
Query: 241 GSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRG 288
+ PP G T + +G P P + S PP +G
Sbjct: 1083 PAATPPSPKGGPAT------PSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Score = 37.4 bits (85), Expect = 0.018
Identities = 53/222 (23%), Positives = 66/222 (29%), Gaps = 34/222 (15%)
Query: 37 PLGAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVAR 96
P GA +TP A + GL P PK P+ A P P+ S
Sbjct: 1191 PKGAPTTP-----AATPPSPKGGLATP---SPKGAPTTPAATPPSPKGGLATPSPKGAPT 1242
Query: 97 ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPL 156
+ P P P P + A TP A +G L GA PP
Sbjct: 1243 TPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG------GLATPPHKGAPNPAVVTPPS 1296
Query: 157 PPSSPKARMERASRKLPSRV--------NSRPPHPAPTRP--TPRVQGGFGREPRAAAGQ 206
P P + + P+ + PP APT P TP G P
Sbjct: 1297 PKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSS 1356
Query: 207 GRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDS 248
G + P + GP PPA G P S
Sbjct: 1357 KGG----------PTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388
Score = 37.0 bits (84), Expect = 0.023
Identities = 69/305 (22%), Positives = 92/305 (30%), Gaps = 38/305 (12%)
Query: 8 PEAGRAPTGLRVPHRAPHILAQLQPNETQPLGAHSTP-YGGTLEAVSAFHRLGLGLPIAG 66
P +P +P AP A P+ P G +TP G +A G P
Sbjct: 1041 PSPKGSPAATPLPKGAPTTPAATLPS---PKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097
Query: 67 RPKAGPSPSPA----------------APTRPRLLHGRRSAGHVARADVSPPAGPVPAPT 110
PK P P A APT P G P P P
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP 1157
Query: 111 PPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASR 170
P+ A P A G + + P P SPK + S
Sbjct: 1158 SPKGGLATPPPKGAPTTPAATPPSPKG---GLATPSPKGAPTTPAATPPSPKGGLATPSP 1214
Query: 171 K-LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGW--LPPCRLRLQDSGPRRRP 227
K P+ + PP P TP +G P A +G PP G P
Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGA-PTTPAATPPSPKGGPATPP------PKGAPTPP 1267
Query: 228 GPGPPALRSGRS----RGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECL 283
PP+L+ G + +G+ P + GG + +G P P + S
Sbjct: 1268 AATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA-TSPPKGAPTPPAATPPSPKGSPGT 1326
Query: 284 PPRRG 288
PP +G
Sbjct: 1327 PPPKG 1331
Score = 32.3 bits (72), Expect = 0.58
Identities = 47/204 (23%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 61 GLPIAGRPKAGPSPSPAAPTRPRLLHGR-RSAGHVARADVSPPA----GPVPA------- 108
G P PK P+P A P P+ G G V+PP+ +PA
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG 1358
Query: 109 -PTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPK----A 163
PT P ++ TP A G + G + + + P + P SPK
Sbjct: 1359 GPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPAT 1418
Query: 164 RMERASRKLPSRVNSRPP--HPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDS 221
+ R PS+ + PP P + P G P + +G LP +
Sbjct: 1419 PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG-GPATPSSKGDPTLP----AVTPP 1473
Query: 222 GPRRRPGPGPPALRSGRSRGSGRP 245
P+ P P A S + P
Sbjct: 1474 SPKEPPAPKQVATSSSPKKAPATP 1497
Score = 28.5 bits (62), Expect = 8.4
Identities = 43/160 (26%), Positives = 56/160 (35%), Gaps = 37/160 (23%)
Query: 64 IAGRPKAGPS-PS----PAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAP--TPPRARN 116
I PK P+ PS P APT LL + A + + PPA VP+P TP
Sbjct: 1509 IPSSPKEVPATPSSRRDPIAPTAT-LLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTP 1567
Query: 117 AETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRV 176
E P +S ++ P + PS+ K +P V
Sbjct: 1568 KEAPATPSS----------------------KEASSPPAVTPSTYKGAPSPKELLIPPAV 1605
Query: 177 NSRPPHPAPTRPT---PRVQGGFGREPRAAAGQGRGWLPP 213
S P APT P P + G P A +G PP
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKG----PATPAPKGTPTSPP 1641
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 47.8 bits (112), Expect = 1e-05
Identities = 78/266 (29%), Positives = 96/266 (36%), Gaps = 64/266 (24%)
Query: 14 PTGLRVPHRAPHILAQ-------LQPNETQPLGAHSTPYGGTLE-----AVSAFHRLGLG 61
PT L P RA Q L+ P G S P GG A +A H+LG G
Sbjct: 112 PTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPG-RSGPSGGVRSGAGHRAAAAEHQLGAG 170
Query: 62 L-------PIAGRPKAGPSP--SPAAPTRPRLLHGRRSAGHVARADVSPPAGPV------ 106
P A P A P P PA P RP R + PP P+
Sbjct: 171 FSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSRWV 230
Query: 107 ---PAPTPPRARNAETPWNA-ASLLNRGCCWGA--AALLIGRLLGANQKRQRMPPLPPSS 160
P P PR R P +L RG + +A+L GR+ G + L PSS
Sbjct: 231 LAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELT----LTPSS 286
Query: 161 PKARMERA----SRKLPSRVNS------RPPHPAPTRPTPRVQGGFGREPR-----AAAG 205
+A A + P+R RPP P+ P+P+ QG R+PR A G
Sbjct: 287 RRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALARG 346
Query: 206 QGRGWLPPCRLRLQDSGPRRRPGPGP 231
RG P RPGP P
Sbjct: 347 APRG-----------RTPSPRPGPAP 361
Score = 39.3 bits (90), Expect = 0.005
Identities = 50/195 (25%), Positives = 68/195 (34%), Gaps = 31/195 (15%)
Query: 104 GPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA 163
G +P P R+ +P G +L +G +R +P P +P
Sbjct: 29 GALPPDRSPTPRSRVSP-------------GVTSLAVGPGNPTRCQRSGVPYEGPGAPGG 75
Query: 164 RMERASR-KLP-----------SRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWL 211
+ R SR +LP R N P P RPT G RA G+ +G
Sbjct: 76 QQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPT-----SLGFPARAGQGRVQGAA 130
Query: 212 PPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSS 271
P +LR + P R GP +RSG + GA + +G R PAP
Sbjct: 131 PGRKLRGEPKTPPGRSGPS-GGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG 189
Query: 272 FAASSALPEECLPPR 286
A P PR
Sbjct: 190 PLLRPARPPRPYFPR 204
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 47.0 bits (110), Expect = 2e-05
Identities = 47/198 (23%), Positives = 70/198 (35%), Gaps = 24/198 (12%)
Query: 89 RSAGHVARADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQ 148
R G A A P P P PP +R + P + + G GA RLLG
Sbjct: 40 RGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLLGLGG 99
Query: 149 KRQRM---------PPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGRE 199
+ P PP++P +R P R PAP P P + +G
Sbjct: 100 PPRPFVVLLLPLASPGAPPAAPTRASPLGARASPPRSGVSLARPAPGCPRPACEPVYG-- 157
Query: 200 PRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGW 259
P + L+ +++ + + + PP +A GGSG
Sbjct: 158 -------------PLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGL 204
Query: 260 AAALRGWPAPSSFAASSA 277
A+ P+PSS + SS+
Sbjct: 205 LASPAAAPSPSSSSVSSS 222
Score = 29.6 bits (65), Expect = 3.7
Identities = 46/203 (22%), Positives = 62/203 (30%), Gaps = 43/203 (21%)
Query: 58 LGLGLP-----IAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPP 112
LGLG P + P A P PAAPTR L R SPP V P
Sbjct: 95 LGLGGPPRPFVVLLLPLASPGAPPAAPTRASPLGAR----------ASPPRSGVSLARPA 144
Query: 113 RARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKL 172
GC A + G L + + +Q+ + ++ ++
Sbjct: 145 ----------------PGCPRPACEPVYGPLTMSLKPQQQQ----------QQQQQQQQQ 178
Query: 173 PSRVNSRPPHPAPTRPTPRVQGGFG--REPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPG 230
+ + P P R GG G P AA + S G G
Sbjct: 179 QQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATAPSSVVAATSGGG 238
Query: 231 PPALRSGRSRGSGRPPDSAGAAG 253
P L GR+ G P + G
Sbjct: 239 RPGLGRGRNSNKGLPQSTISFDG 261
Score = 28.5 bits (62), Expect = 8.4
Identities = 33/116 (28%), Positives = 39/116 (33%), Gaps = 6/116 (5%)
Query: 176 VNSRPPHPAP-----TRPTPRVQGGFGR-EPRAAAGQGRGWLPPCRLRLQDSGPRRRPGP 229
VN P P+P +RP R Q G PRAA PP R S P P
Sbjct: 546 VNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSP 605
Query: 230 GPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPP 285
P + R G P S A + +A RG + S P E P
Sbjct: 606 APVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATP 661
Score = 28.5 bits (62), Expect = 8.4
Identities = 35/157 (22%), Positives = 48/157 (30%), Gaps = 37/157 (23%)
Query: 66 GRPKAGPSPSPAAPTRPRLLHGRRS----AGHVARADVSPPAGPVPAPTPPRARNAETPW 121
G P P PSP++ R G S A R PP+ P P+ P A + P
Sbjct: 549 GVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAP- 607
Query: 122 NAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSR------ 175
+ KR P SPKA+ + ++ +
Sbjct: 608 ----------------------VSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISS 645
Query: 176 ----VNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGR 208
V+ PP A T P R G +G R
Sbjct: 646 GLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPR 682
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 47.0 bits (110), Expect = 2e-05
Identities = 72/292 (24%), Positives = 102/292 (34%), Gaps = 55/292 (18%)
Query: 13 APTGLRVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVS---------------AFHR 57
+P R +P + + QP A S PYGG + VS +F
Sbjct: 610 SPALPRPSRSSPGLYTSPGQDSLQPT-AVSPPYGGDISPVSPSRAWSPRAKQAPRPSFST 668
Query: 58 LGLGLPIAGRPKAGPSP---SPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRA 114
G+ R ++ P+ +P A P L G S G S + P P P PP
Sbjct: 669 RNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPM 728
Query: 115 RNAETPWNAASLLN----RGCCWGAAALLIGRLLGANQKRQRMP-------PLPPSSPKA 163
+ + + + L R ALL ++ A +++ P P P S P+A
Sbjct: 729 SPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRA 788
Query: 164 RMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGP 223
PP P P P PR++ P +AA G + P R L +GP
Sbjct: 789 P---------------PPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPL-PAGP 832
Query: 224 R-----RRPGPGPPA----LRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGW 266
R P P PP RS + +GA G G+ RGW
Sbjct: 833 SSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGW 884
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 47.0 bits (110), Expect = 2e-05
Identities = 61/234 (26%), Positives = 79/234 (33%), Gaps = 18/234 (7%)
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARA---DVSPPAGPVPAP-TPPRARNAE 118
P G GP P P P P G +S G R + PP G + PPR E
Sbjct: 62 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPE 121
Query: 119 TPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNS 178
P ++G G NQ + PP P P+ + ++
Sbjct: 122 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG--PPPRPGKPEGPPPQGG----NQSQG 175
Query: 179 RPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRS 236
PPHP P G + P G+ G PP + Q GP RPG GPP+
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG--PPPQGGNQSQGPPPRPGKPEGPPS--Q 231
Query: 237 GRSRGSGRPPDSAGAAGTGGSGWAAALRGWP--APSSFAASSALPEECLPPRRG 288
G ++ G PP G R P P P++ LPP G
Sbjct: 232 GGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAG 285
Score = 37.0 bits (84), Expect = 0.023
Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 24/133 (18%)
Query: 145 GANQKRQRMPPLPPSSPKARMERASRKL------PSRVNSRPPH---------PAPTRPT 189
G NQ QR PP PP P+ R + + P + PP P P +P
Sbjct: 43 GGNQP-QRTPP-PPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 100
Query: 190 --PRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSRG-SGR 244
P G + P G+ G PP + Q GP RPG GPP +S+G R
Sbjct: 101 GQPPQGGNQSQGPPPRPGKPEG--PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 158
Query: 245 PPDSAGAAGTGGS 257
P G GG+
Sbjct: 159 PGKPEGPPPQGGN 171
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 46.6 bits (109), Expect = 3e-05
Identities = 51/197 (25%), Positives = 65/197 (32%), Gaps = 29/197 (14%)
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
P G GP P P P P G + G PP P PP+ N
Sbjct: 185 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDNKSQSAR 236
Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
+ +G G NQ + PP PP P+ + K PP
Sbjct: 237 SPPGKPQG----------PPPQGGNQPQG--PPPPPGKPQGPPPQGGNKPQG-----PPP 279
Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSR 240
P + P G R R+ G+ +G PP + Q GP PG GPP + +
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 337
Query: 241 GSGRPPDSAGAAGTGGS 257
G P G GGS
Sbjct: 338 GPPPPGKPQGPPPQGGS 354
Score = 42.0 bits (97), Expect = 7e-04
Identities = 49/186 (26%), Positives = 64/186 (34%), Gaps = 32/186 (17%)
Query: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRARNAETPWN 122
P G GP P P P P G + G PP P PP+ + +P +
Sbjct: 62 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQG--------PPPPGKPQGPPPQGDKSRSPRS 113
Query: 123 AASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKLPSRVNSRPPH 182
G G G NQ + PP PP P+ + K PP
Sbjct: 114 PP-----GKPQGPPPQ------GGNQPQG--PPPPPGKPQGPPPQGGNKPQG-----PPP 155
Query: 183 PAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--PGPPALRSGRSR 240
P + P R R+ G+ +G PP + Q GP PG GPP G ++
Sbjct: 156 PGKPQGPPPQGDNKSRSSRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPP--QGGNK 211
Query: 241 GSGRPP 246
G PP
Sbjct: 212 PQGPPP 217
>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
sapiens]
Length = 331
Score = 46.2 bits (108), Expect = 4e-05
Identities = 69/241 (28%), Positives = 91/241 (37%), Gaps = 42/241 (17%)
Query: 34 ETQPLGAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPAAPTRPRLLHGRRSAGH 93
ETQ A +TP +V ++ G + RPK PAA P R AG
Sbjct: 29 ETQEDRASATPRLADSGSVPHDSQVAEGPSVDTRPKK-MEKEPAARGTPGTGKERLKAGA 87
Query: 94 VAR-------ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLL-- 144
R A +PP P P PP A + E PW S LN+ + L+G
Sbjct: 88 SPRSVPARKKAQTAPPLQP---PPPPPALSEELPWGDLS-LNKCLVLASLVALLGSAFQL 143
Query: 145 --------GANQKRQRMPPLPPSS----PKARMERASRKLPSRVNSRPPHP-APTRPTPR 191
A Q R P +PPSS P + + + + P S PP P A P+
Sbjct: 144 CRDAVPGEAALQARVPEPWVPPSSAPREPSSPLPKFEAQAPP---SAPPAPRAEAEVRPK 200
Query: 192 VQG------GFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRP-GPGPPALRSGRSRGSGR 244
+ G EP A G+ + R+ L D GP+ RP G P R + R R
Sbjct: 201 IPGSREAAENDEEEPGEATGEA---VREDRVTLADRGPKERPRREGKP--RKEKPRKEER 255
Query: 245 P 245
P
Sbjct: 256 P 256
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 9/155 (5%)
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
LP + P P PT P R RE + RG P L GP P P
Sbjct: 200 LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259
Query: 232 PALRSGRSRGS--GRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
P LR GR+ GS GR P SG A G A S+ P C
Sbjct: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCATV--GLRRGDCDRAGSSQPPATSGNGERC 317
Query: 290 GWAELLEREAGGSD-----TGHLPLGNEGGRGEGE 319
+ R GG + H P G R + E
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352
Score = 35.4 bits (80), Expect = 0.068
Identities = 53/199 (26%), Positives = 66/199 (33%), Gaps = 42/199 (21%)
Query: 66 GRPK---------AGPSPSP---AAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPR 113
GRPK A P+P P A P RP R A + S PA P P P
Sbjct: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGP 251
Query: 114 ARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERAS--RK 171
A + P A L GR G+ R+ P P ++ ++ R
Sbjct: 252 AHSPAPP--------------APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRG 297
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--- 228
R S P PA + R + R R G+G G GP PG
Sbjct: 298 DCDRAGSSQP-PATSGNGERCRFCRRRRRRGGGGEGEG-------THATHGPASPPGRRH 349
Query: 229 ---PGPPALRSGRSRGSGR 244
G LR+G GS R
Sbjct: 350 DEEVGAAVLRAGSGEGSRR 368
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 45.8 bits (107), Expect = 5e-05
Identities = 65/234 (27%), Positives = 85/234 (36%), Gaps = 20/234 (8%)
Query: 37 PLGAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPAAPTRPRLLHG-RRSAGHVA 95
PL + S+ + SA LGL + R + S + HG +SAG A
Sbjct: 21 PLASSSSRSAAAPSSSSAQSGPELGLSLGPRLPSASSKLRVFTGYFSVPHGVGKSAGAAA 80
Query: 96 --------RADVSPPAGPVPAPTPPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGAN 147
+A + PAG + AR W L R A R L
Sbjct: 81 GEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGGASRPLAGE 140
Query: 148 QKRQ---RMPPLPPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAA 204
R+ R P P +AR R++ RV++ P PA P R Q A
Sbjct: 141 PWREAARRRPQQCPQWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGG 200
Query: 205 GQGRG---WLPPCRLRLQDSG--PRRRPGPGPPALRSGRSRGSGRPPDSAGAAG 253
G R +PPCR G RR G GP R+ R + RPP +A AAG
Sbjct: 201 GGARAEPPRVPPCRPAGCSGGNRSRRAAGAGP---RTTRRKPPPRPPGTAPAAG 251
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 9/155 (5%)
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
LP + P P PT P R RE + RG P L GP P P
Sbjct: 200 LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259
Query: 232 PALRSGRSRGS--GRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
P LR GR+ GS GR P SG A G A S+ P C
Sbjct: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCATV--GLRRGDCDRAGSSQPPATSGNGERC 317
Query: 290 GWAELLEREAGGSD-----TGHLPLGNEGGRGEGE 319
+ R GG + H P G R + E
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352
Score = 35.4 bits (80), Expect = 0.068
Identities = 53/199 (26%), Positives = 66/199 (33%), Gaps = 42/199 (21%)
Query: 66 GRPK---------AGPSPSP---AAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPR 113
GRPK A P+P P A P RP R A + S PA P P P
Sbjct: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGP 251
Query: 114 ARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERAS--RK 171
A + P A L GR G+ R+ P P ++ ++ R
Sbjct: 252 AHSPAPP--------------APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRG 297
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--- 228
R S P PA + R + R R G+G G GP PG
Sbjct: 298 DCDRAGSSQP-PATSGNGERCRFCRRRRRRGGGGEGEG-------THATHGPASPPGRRH 349
Query: 229 ---PGPPALRSGRSRGSGR 244
G LR+G GS R
Sbjct: 350 DEEVGAAVLRAGSGEGSRR 368
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 9/155 (5%)
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGP 231
LP + P P PT P R RE + RG P L GP P P
Sbjct: 200 LPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPA 259
Query: 232 PALRSGRSRGS--GRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEECLPPRRGC 289
P LR GR+ GS GR P SG A G A S+ P C
Sbjct: 260 PELREGRAPGSTAGRRPRPREPQAAEESGCATV--GLRRGDCDRAGSSQPPATSGNGERC 317
Query: 290 GWAELLEREAGGSD-----TGHLPLGNEGGRGEGE 319
+ R GG + H P G R + E
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEE 352
Score = 35.4 bits (80), Expect = 0.068
Identities = 53/199 (26%), Positives = 66/199 (33%), Gaps = 42/199 (21%)
Query: 66 GRPK---------AGPSPSP---AAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPR 113
GRPK A P+P P A P RP R A + S PA P P P
Sbjct: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLPLPGP 251
Query: 114 ARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERAS--RK 171
A + P A L GR G+ R+ P P ++ ++ R
Sbjct: 252 AHSPAPP--------------APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRG 297
Query: 172 LPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPG--- 228
R S P PA + R + R R G+G G GP PG
Sbjct: 298 DCDRAGSSQP-PATSGNGERCRFCRRRRRRGGGGEGEG-------THATHGPASPPGRRH 349
Query: 229 ---PGPPALRSGRSRGSGR 244
G LR+G GS R
Sbjct: 350 DEEVGAAVLRAGSGEGSRR 368
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 5e-05
Identities = 64/263 (24%), Positives = 87/263 (33%), Gaps = 55/263 (20%)
Query: 67 RPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSP--PAGPVPAPTPPRARNAETPWNAA 124
RP G P P P +S+ H + P P P P PTPP P+
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP-------PFPG- 224
Query: 125 SLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA----------------RMERA 168
NRG G ++ L ++ R PPLPP+ +A + R
Sbjct: 225 ---NRGTALGGGSIRQSPLSSSSPFSNR-PPLPPTPSRALDDKPPPPPPPVGNRPSIHRE 280
Query: 169 SRKLPSRVNSRPPHPAPTRPT-----------PRVQGGFGREPRAAAGQGRGWLPPCRLR 217
+ P N++PP P+ RP+ P G P ++ LP L
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS 340
Query: 218 LQDSGPRRRPGPG-------------PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALR 264
L S P P PG PP +R R PP + S A
Sbjct: 341 LSSSTP-PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 265 GWPAPSSFAASSALPEECLPPRR 287
P+ S + + P LPP R
Sbjct: 400 QLPSRSGVDSPRSGPRPPLPPDR 422
Score = 38.5 bits (88), Expect = 0.008
Identities = 69/243 (28%), Positives = 80/243 (32%), Gaps = 47/243 (19%)
Query: 29 QLQPNETQPL--GAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPA---APTRPR 83
Q P T P G T GG S L P + RP P+PS A P P
Sbjct: 212 QPSPGPTPPPFPGNRGTALGGGSIRQSP---LSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
Query: 84 LLHGRRSAGHVARADVSPPAG---PVPA-PTPPRARNAETPWNAASLLNRGCCWGAAALL 139
G R + H PP PVP+ P P + A P S
Sbjct: 269 PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS-------------- 314
Query: 140 IGRLLGANQKRQRMPPLPPSSP-KARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGR 198
R PPLPPSS R ++ S +S PP P+P R P R
Sbjct: 315 ----------RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 199 EP---RAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSG--RSRGSGRPP-----DS 248
P R G+ PP + S R P RSG R RPP S
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Query: 249 AGA 251
AGA
Sbjct: 425 AGA 427
Score = 38.1 bits (87), Expect = 0.011
Identities = 47/164 (28%), Positives = 58/164 (35%), Gaps = 30/164 (18%)
Query: 63 PIAGRP----KAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRAR-NA 117
P+ RP +A P P P P R SA A PP+ P P P PP + N
Sbjct: 270 PVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGND 329
Query: 118 ETPWNAASLLNRGCCWGAAALLI------GRLLGANQKRQRMP---------PLPPSSPK 162
ETP L R ++ + G L +R P PLPP P
Sbjct: 330 ETP----RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPV 385
Query: 163 ARMERASR------KLPSRVNSRPPHPAPTRPTPRVQGGFGREP 200
+R SR +LPSR P P P P + G P
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 5e-05
Identities = 64/263 (24%), Positives = 87/263 (33%), Gaps = 55/263 (20%)
Query: 67 RPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSP--PAGPVPAPTPPRARNAETPWNAA 124
RP G P P P +S+ H + P P P P PTPP P+
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP-------PFPG- 224
Query: 125 SLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKA----------------RMERA 168
NRG G ++ L ++ R PPLPP+ +A + R
Sbjct: 225 ---NRGTALGGGSIRQSPLSSSSPFSNR-PPLPPTPSRALDDKPPPPPPPVGNRPSIHRE 280
Query: 169 SRKLPSRVNSRPPHPAPTRPT-----------PRVQGGFGREPRAAAGQGRGWLPPCRLR 217
+ P N++PP P+ RP+ P G P ++ LP L
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS 340
Query: 218 LQDSGPRRRPGPG-------------PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALR 264
L S P P PG PP +R R PP + S A
Sbjct: 341 LSSSTP-PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 265 GWPAPSSFAASSALPEECLPPRR 287
P+ S + + P LPP R
Sbjct: 400 QLPSRSGVDSPRSGPRPPLPPDR 422
Score = 38.5 bits (88), Expect = 0.008
Identities = 69/243 (28%), Positives = 80/243 (32%), Gaps = 47/243 (19%)
Query: 29 QLQPNETQPL--GAHSTPYGGTLEAVSAFHRLGLGLPIAGRPKAGPSPSPA---APTRPR 83
Q P T P G T GG S L P + RP P+PS A P P
Sbjct: 212 QPSPGPTPPPFPGNRGTALGGGSIRQSP---LSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
Query: 84 LLHGRRSAGHVARADVSPPAG---PVPA-PTPPRARNAETPWNAASLLNRGCCWGAAALL 139
G R + H PP PVP+ P P + A P S
Sbjct: 269 PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS-------------- 314
Query: 140 IGRLLGANQKRQRMPPLPPSSP-KARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGR 198
R PPLPPSS R ++ S +S PP P+P R P R
Sbjct: 315 ----------RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 199 EP---RAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSG--RSRGSGRPP-----DS 248
P R G+ PP + S R P RSG R RPP S
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Query: 249 AGA 251
AGA
Sbjct: 425 AGA 427
Score = 38.1 bits (87), Expect = 0.011
Identities = 47/164 (28%), Positives = 58/164 (35%), Gaps = 30/164 (18%)
Query: 63 PIAGRP----KAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPPRAR-NA 117
P+ RP +A P P P P R SA A PP+ P P P PP + N
Sbjct: 270 PVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGND 329
Query: 118 ETPWNAASLLNRGCCWGAAALLI------GRLLGANQKRQRMP---------PLPPSSPK 162
ETP L R ++ + G L +R P PLPP P
Sbjct: 330 ETP----RLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPV 385
Query: 163 ARMERASR------KLPSRVNSRPPHPAPTRPTPRVQGGFGREP 200
+R SR +LPSR P P P P + G P
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 45.4 bits (106), Expect = 7e-05
Identities = 54/200 (27%), Positives = 76/200 (38%), Gaps = 36/200 (18%)
Query: 56 HRLGLGLPIAG---RPKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPAPTPP 112
H+ G G G RP+ GP P AP P GR +SPPA P P
Sbjct: 1104 HKPGAGATAPGTQERPQ-GPLPGAVAPEAP----GR----------LSPPAAPEERPAAD 1148
Query: 113 RARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASRKL 172
R+ + ++ S ++R C GA+ G A+ +R + + + A +L
Sbjct: 1149 -TRSIVSGYSTLSTMDRSVCSGASGRRAGAGDEADDERSELSHVETDTEGAAGAGPGGRL 1207
Query: 173 PSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPP 232
R + H P R + GR AG+G GPR P PP
Sbjct: 1208 TRRPSFSSHHLMPCDTLARRRLARGRPDGEGAGRG--------------GPR---APEPP 1250
Query: 233 ALRSGRSRGSGRPPDSAGAA 252
S S+ S RPP +A A+
Sbjct: 1251 GSASSSSQESLRPPAAALAS 1270
>gi|239748337 PREDICTED: hypothetical protein XP_002346632 [Homo
sapiens]
Length = 189
Score = 45.4 bits (106), Expect = 7e-05
Identities = 43/116 (37%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 220 DSGPRRRPG-PGPPALRSGRSRGSGRPPDSAGAAGTG---GSGWAAALRG-------WPA 268
++GPRRRP PG R+ R G R SA AG G GSG RG W
Sbjct: 53 ETGPRRRPFLPGVAHPRTHRQTGPARVTRSA-KAGYGLRVGSGPYGRPRGNAGQEKVWEK 111
Query: 269 PSSFAASSALPEECLPPRRGCGWAELLEREAGGSDTGHLPLGNE----GGRGEGEG 320
P+S A++S P E P R G G R G D L G + G G GEG
Sbjct: 112 PASEASASGRPPELAPARSGAGQG----RRPNGGDRQGLGAGRDKHTTDGAGPGEG 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,063,143
Number of Sequences: 37866
Number of extensions: 1392965
Number of successful extensions: 12798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 1428
Number of HSP's that attempted gapping in prelim test: 8856
Number of HSP's gapped (non-prelim): 4535
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.