Search of human proteins with 239742753

Search of human proteins with 239742753

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742753 PREDICTED: similar to high mobility group box 3
isoform 2 [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   373   e-104
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   339   7e-94
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   339   7e-94
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   339   7e-94
gi|71143137 high-mobility group box 3 [Homo sapiens]                  273   6e-74
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   248   2e-66
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   248   2e-66
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   248   2e-66
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   243   9e-65
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   243   9e-65
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          231   3e-61
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          231   3e-61
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   231   3e-61
gi|194688135 high-mobility group box 2 [Homo sapiens]                 195   2e-50
gi|194688133 high-mobility group box 2 [Homo sapiens]                 195   2e-50
gi|11321591 high-mobility group box 2 [Homo sapiens]                  195   2e-50
gi|4504425 high-mobility group box 1 [Homo sapiens]                   194   4e-50
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           186   7e-48
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          180   7e-46
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          180   7e-46
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          180   7e-46
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            174   5e-44
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          120   5e-28
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          120   5e-28
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          111   3e-25
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        103   1e-22
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     83   2e-16
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]       71   6e-13
gi|149408144 TOX high mobility group box family member 2 isoform...    70   8e-13
gi|149408141 TOX high mobility group box family member 2 isoform...    70   8e-13

>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  373 bits (958), Expect = e-104
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MSRMMKASQGALLGDKSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKG 60
           MSRMMKASQGALLGDKSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKG
Sbjct: 1   MSRMMKASQGALLGDKSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKG 60

Query: 61  GKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYI 120
           GKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYI
Sbjct: 61  GKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYI 120

Query: 121 TKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSK 180
           TKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSK
Sbjct: 121 TKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSK 180

Query: 181 KKK 183
           KKK
Sbjct: 181 KKK 183


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  339 bits (870), Expect = 7e-94
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 78
           EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF
Sbjct: 37  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 96

Query: 79  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 138
           LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK
Sbjct: 97  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 156

Query: 139 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 183
           SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK
Sbjct: 157 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 201



 Score = 39.7 bits (91), Expect = 0.001
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKT 123
           K DP  PK   S +  F    R + K  NP ++  + +KK  E W  ++  EK  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 124 AKLKEKYEKDVADSKSKGKFDGSKR 148
                K +K   D + KG   G K+
Sbjct: 62  -----KTDKVHCDREMKGPAKGGKK 81


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  339 bits (870), Expect = 7e-94
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 78
           EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF
Sbjct: 37  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 96

Query: 79  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 138
           LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK
Sbjct: 97  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 156

Query: 139 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 183
           SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK
Sbjct: 157 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 201



 Score = 39.7 bits (91), Expect = 0.001
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKT 123
           K DP  PK   S +  F    R + K  NP ++  + +KK  E W  ++  EK  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 124 AKLKEKYEKDVADSKSKGKFDGSKR 148
                K +K   D + KG   G K+
Sbjct: 62  -----KTDKVHCDREMKGPAKGGKK 81


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  339 bits (870), Expect = 7e-94
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 78
           EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF
Sbjct: 37  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 96

Query: 79  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 138
           LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK
Sbjct: 97  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 156

Query: 139 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 183
           SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK
Sbjct: 157 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 201



 Score = 39.7 bits (91), Expect = 0.001
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKT 123
           K DP  PK   S +  F    R + K  NP ++  + +KK  E W  ++  EK  +    
Sbjct: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61

Query: 124 AKLKEKYEKDVADSKSKGKFDGSKR 148
                K +K   D + KG   G K+
Sbjct: 62  -----KTDKVHCDREMKGPAKGGKK 81


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  273 bits (698), Expect = 6e-74
 Identities = 136/150 (90%), Positives = 139/150 (92%), Gaps = 2/150 (1%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCSERWKTMSGKEKSKFDEMAK DKV  DREMK  GPAKGGKKKKDP+APKRPPSG
Sbjct: 40  EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSG 99

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK AKLKEKYEKDVAD
Sbjct: 100 FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVAD 159

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166
            KSKGKFDG+K PAKVA KKVEEEDE+EEE
Sbjct: 160 YKSKGKFDGAKGPAKVARKKVEEEDEEEEE 189



 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP  PK   S +  F    R + K  NP + +   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62

Query: 122 KTAKLKEKYEKDVAD------SKSKGKFDGSKRP 149
                K +Y++++ D       K K   +  KRP
Sbjct: 63  MAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRP 96


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  248 bits (633), Expect = 2e-66
 Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCS RWKTMS KEK KF EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSG
Sbjct: 40  EFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166
            K KGKF G+KRPAKVA KKVEEEDE++EE
Sbjct: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEE 188


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  248 bits (633), Expect = 2e-66
 Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCS RWKTMS KEK KF EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSG
Sbjct: 40  EFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166
            K KGKF G+KRPAKVA KKVEEEDE++EE
Sbjct: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEE 188


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  248 bits (633), Expect = 2e-66
 Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCS RWKTMS KEK KF EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSG
Sbjct: 40  EFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166
            K KGKF G+KRPAKVA KKVEEEDE++EE
Sbjct: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEE 188


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  243 bits (619), Expect = 9e-65
 Identities = 124/149 (83%), Positives = 131/149 (87%), Gaps = 3/149 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCSERWKTMS KEKSKF+E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSG
Sbjct: 40  EFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE  PK KSTNPGI IGDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA 
Sbjct: 99  FFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAV 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEE 165
            KSKGK DG+K PAKVA KKVEEEDEDEE
Sbjct: 159 YKSKGKSDGAKGPAKVAQKKVEEEDEDEE 187



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP  PK   S +  F    R + K  NP + I   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62

Query: 122 KTAKLKEKYEKDVAD 136
                K  Y++++ D
Sbjct: 63  LAKADKVHYDQEIKD 77


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  243 bits (619), Expect = 9e-65
 Identities = 124/149 (83%), Positives = 131/149 (87%), Gaps = 3/149 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCSERWKTMS KEKSKF+E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSG
Sbjct: 40  EFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE  PK KSTNPGI IGDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA 
Sbjct: 99  FFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAV 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEE 165
            KSKGK DG+K PAKVA KKVEEEDEDEE
Sbjct: 159 YKSKGKSDGAKGPAKVAQKKVEEEDEDEE 187



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP  PK   S +  F    R + K  NP + I   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62

Query: 122 KTAKLKEKYEKDVAD 136
                K  Y++++ D
Sbjct: 63  LAKADKVHYDQEIKD 77


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  231 bits (588), Expect = 3e-61
 Identities = 119/159 (74%), Positives = 131/159 (82%), Gaps = 4/159 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCSE+ KTMSGKEK+KFDEMAK DKVH D+EMK  GP +GGKKK DP+A KRP SG
Sbjct: 40  EFSKKCSEKRKTMSGKEKTKFDEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE  PKIKSTNPGISIGD+AKKLGEMW N +D EKQPYITK A LKEKYEKDVAD
Sbjct: 99  FFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVAD 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEED-EDEEEMRRRMNKQ 174
            KSKGKFD +K P K+AWKKV+E+D EDEEE      K+
Sbjct: 159 YKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKK 197



 Score = 31.6 bits (70), Expect = 0.40
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 66  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKT 123
           D   PK   S +  F+   R + K  NP + +   + +KK  E    ++  EK  +    
Sbjct: 5   DHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMA 64

Query: 124 AKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 156
              K  Y++++ D+   G  +G K+    A K+
Sbjct: 65  KVDKVHYDQEMKDN---GPVEGGKKKDPNALKR 94


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  231 bits (588), Expect = 3e-61
 Identities = 119/159 (74%), Positives = 131/159 (82%), Gaps = 4/159 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCSE+ KTMSGKEK+KFDEMAK DKVH D+EMK  GP +GGKKK DP+A KRP SG
Sbjct: 40  EFSKKCSEKRKTMSGKEKTKFDEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE  PKIKSTNPGISIGD+AKKLGEMW N +D EKQPYITK A LKEKYEKDVAD
Sbjct: 99  FFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVAD 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEED-EDEEEMRRRMNKQ 174
            KSKGKFD +K P K+AWKKV+E+D EDEEE      K+
Sbjct: 159 YKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKK 197



 Score = 31.6 bits (70), Expect = 0.40
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 66  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKT 123
           D   PK   S +  F+   R + K  NP + +   + +KK  E    ++  EK  +    
Sbjct: 5   DHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMA 64

Query: 124 AKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 156
              K  Y++++ D+   G  +G K+    A K+
Sbjct: 65  KVDKVHYDQEMKDN---GPVEGGKKKDPNALKR 94


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  231 bits (588), Expect = 3e-61
 Identities = 119/159 (74%), Positives = 131/159 (82%), Gaps = 4/159 (2%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76
           EFSKKCSE+ KTMSGKEK+KFDEMAK DKVH D+EMK  GP +GGKKK DP+A KRP SG
Sbjct: 40  EFSKKCSEKRKTMSGKEKTKFDEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSG 98

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136
           FFLF SE  PKIKSTNPGISIGD+AKKLGEMW N +D EKQPYITK A LKEKYEKDVAD
Sbjct: 99  FFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVAD 158

Query: 137 SKSKGKFDGSKRPAKVAWKKVEEED-EDEEEMRRRMNKQ 174
            KSKGKFD +K P K+AWKKV+E+D EDEEE      K+
Sbjct: 159 YKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKK 197



 Score = 31.6 bits (70), Expect = 0.40
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 66  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKT 123
           D   PK   S +  F+   R + K  NP + +   + +KK  E    ++  EK  +    
Sbjct: 5   DHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMA 64

Query: 124 AKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 156
              K  Y++++ D+   G  +G K+    A K+
Sbjct: 65  KVDKVHYDQEMKDN---GPVEGGKKKDPNALKR 94


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  195 bits (496), Expect = 2e-50
 Identities = 101/153 (66%), Positives = 116/153 (75%), Gaps = 5/153 (3%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPP 74
           EFSKKCSERWKTMS KEKSKF++MAK+DK   DREMK   P KG KK  KKDP+APKRPP
Sbjct: 40  EFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPP 99

Query: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134
           S FFLF SE RPKIKS +PG+SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+
Sbjct: 100 SAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159

Query: 135 ADSKSKGKFD-GSKRPAKVAWKKVEEEDEDEEE 166
           A  ++KGK + G K P +    K + E EDEEE
Sbjct: 160 AAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEE 192



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP+ P+   S +  F    R + K  +P  S+   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 122 KTAKLKEKYEKDVAD-SKSKGKFDGSKR 148
                K +Y++++ +    KG   G K+
Sbjct: 63  MAKSDKARYDREMKNYVPPKGDKKGKKK 90


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  195 bits (496), Expect = 2e-50
 Identities = 101/153 (66%), Positives = 116/153 (75%), Gaps = 5/153 (3%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPP 74
           EFSKKCSERWKTMS KEKSKF++MAK+DK   DREMK   P KG KK  KKDP+APKRPP
Sbjct: 40  EFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPP 99

Query: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134
           S FFLF SE RPKIKS +PG+SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+
Sbjct: 100 SAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159

Query: 135 ADSKSKGKFD-GSKRPAKVAWKKVEEEDEDEEE 166
           A  ++KGK + G K P +    K + E EDEEE
Sbjct: 160 AAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEE 192



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP+ P+   S +  F    R + K  +P  S+   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 122 KTAKLKEKYEKDVAD-SKSKGKFDGSKR 148
                K +Y++++ +    KG   G K+
Sbjct: 63  MAKSDKARYDREMKNYVPPKGDKKGKKK 90


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  195 bits (496), Expect = 2e-50
 Identities = 101/153 (66%), Positives = 116/153 (75%), Gaps = 5/153 (3%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPP 74
           EFSKKCSERWKTMS KEKSKF++MAK+DK   DREMK   P KG KK  KKDP+APKRPP
Sbjct: 40  EFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPP 99

Query: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134
           S FFLF SE RPKIKS +PG+SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+
Sbjct: 100 SAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159

Query: 135 ADSKSKGKFD-GSKRPAKVAWKKVEEEDEDEEE 166
           A  ++KGK + G K P +    K + E EDEEE
Sbjct: 160 AAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEE 192



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP+ P+   S +  F    R + K  +P  S+   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 122 KTAKLKEKYEKDVAD-SKSKGKFDGSKR 148
                K +Y++++ +    KG   G K+
Sbjct: 63  MAKSDKARYDREMKNYVPPKGDKKGKKK 90


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  194 bits (493), Expect = 4e-50
 Identities = 102/156 (65%), Positives = 116/156 (74%), Gaps = 8/156 (5%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPP 74
           EFSKKCSERWKTMS KEK KF++MAK DK   +REMK   P KG  KKK  DP+APKRPP
Sbjct: 40  EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 99

Query: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134
           S FFLF SE RPKIK  +PG+SIGDVAKKLGEMWNN    +KQPY  K AKLKEKYEKD+
Sbjct: 100 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 159

Query: 135 ADSKSKGKFDGSK----RPAKVAWKKVEEEDEDEEE 166
           A  ++KGK D +K    +  K   KK EEEDE++EE
Sbjct: 160 AAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 195



 Score = 36.6 bits (83), Expect = 0.012
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121
           K DP  P+   S +  F    R + K  +P  S+   + +KK  E W  ++  EK  +  
Sbjct: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62

Query: 122 KTAKLKEKYEKDV-----ADSKSKGKFDGSKRPAK 151
                K +YE+++        ++K KF     P +
Sbjct: 63  MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  186 bits (473), Expect = 7e-48
 Identities = 98/156 (62%), Positives = 114/156 (73%), Gaps = 8/156 (5%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPP 74
           EFS KCSERWKTMS KEK KF++MAK DK H +R+MK   P KG  KKK  DP+APKRPP
Sbjct: 40  EFSNKCSERWKTMSAKEKGKFEDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPP 99

Query: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134
           S FFLF SE  PKIK  +PG+SIGDVAKKLGEMWNN    +KQP   K AKLKEKYEKD+
Sbjct: 100 SAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDI 159

Query: 135 ADSKSKGKFDGSK----RPAKVAWKKVEEEDEDEEE 166
           A  ++KGK + +K    +  K   KK EEEDE++EE
Sbjct: 160 AAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEE 195



 Score = 31.2 bits (69), Expect = 0.52
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 64  KKDPSAPKRPPSGFFLFSSEIRP--KIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 121
           K DP  P+   S +  F    R   K K ++  ++  + + K  E W  ++  EK  +  
Sbjct: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62

Query: 122 KTAKLKEKYEKDV-----ADSKSKGKFDGSKRPAK 151
                K  YE+ +        ++K KF     P +
Sbjct: 63  MAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKR 97


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  180 bits (456), Expect = 7e-46
 Identities = 98/163 (60%), Positives = 113/163 (69%), Gaps = 15/163 (9%)

Query: 19  EFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKGGKKKK--DP 67
           EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG  KKK  DP
Sbjct: 169 EFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDP 228

Query: 68  SAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLK 127
           +APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQPY  ++AKLK
Sbjct: 229 NAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLK 288

Query: 128 EKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 166
           EKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 289 EKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331



 Score = 28.9 bits (63), Expect = 2.6
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 66  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAK 125
           D   P RP        S I          ++  + +KK  E W N++  EK  +     K
Sbjct: 136 DHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGK 195

Query: 126 LKEKYEKDVADSKSKGK 142
            ++  + D A  K + K
Sbjct: 196 FEDMAKADKAHYKREMK 212


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  180 bits (456), Expect = 7e-46
 Identities = 98/163 (60%), Positives = 113/163 (69%), Gaps = 15/163 (9%)

Query: 19  EFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKGGKKKK--DP 67
           EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG  KKK  DP
Sbjct: 169 EFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDP 228

Query: 68  SAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLK 127
           +APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQPY  ++AKLK
Sbjct: 229 NAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLK 288

Query: 128 EKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 166
           EKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 289 EKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331



 Score = 28.9 bits (63), Expect = 2.6
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 66  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAK 125
           D   P RP        S I          ++  + +KK  E W N++  EK  +     K
Sbjct: 136 DHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGK 195

Query: 126 LKEKYEKDVADSKSKGK 142
            ++  + D A  K + K
Sbjct: 196 FEDMAKADKAHYKREMK 212


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  180 bits (456), Expect = 7e-46
 Identities = 98/163 (60%), Positives = 113/163 (69%), Gaps = 15/163 (9%)

Query: 19  EFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKGGKKK--KDP 67
           EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG  KK  KDP
Sbjct: 169 EFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDP 228

Query: 68  SAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLK 127
           +APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQPY  ++AKLK
Sbjct: 229 NAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLK 288

Query: 128 EKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 166
           EKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 289 EKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331



 Score = 28.9 bits (63), Expect = 2.6
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 66  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAK 125
           D   P RP        S I          ++  + +KK  E W N++  EK  +     K
Sbjct: 136 DHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGK 195

Query: 126 LKEKYEKDVADSKSKGK 142
            ++  + D A  K + K
Sbjct: 196 FEDMAKADKAHYKREMK 212


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  174 bits (440), Expect = 5e-44
 Identities = 93/165 (56%), Positives = 115/165 (69%), Gaps = 6/165 (3%)

Query: 16  KSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPK 71
           K  EF KKCSE WKT+  KEK KF++MAK DK H +REMK   P KG KKKK  DP+APK
Sbjct: 711 KFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEKKKKFKDPNAPK 770

Query: 72  RPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYE 131
           RPP  FFLF SE RPKIK  +PG+SI DV KKL  MWNN   ++KQ Y  K AKLKEKY+
Sbjct: 771 RPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLKEKYK 830

Query: 132 KDVADSKSKGKFDGSKRPAKVA--WKKVEEEDEDEEEMRRRMNKQ 174
           KD+A  ++KGK + +K+    A   KK +EE+EDEE+ +   N++
Sbjct: 831 KDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEE 875


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  120 bits (302), Expect = 5e-28
 Identities = 71/153 (46%), Positives = 93/153 (60%), Gaps = 5/153 (3%)

Query: 16  KSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPK 71
           K P  S + S +    + +   +  +  K D  H +REMK   P K   K K  DP+APK
Sbjct: 6   KLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPK 65

Query: 72  RPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYE 131
            PP  FF+FSSE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K  KLKEKYE
Sbjct: 66  SPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYE 124

Query: 132 KDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDE 164
           KD+A    KGK D +K+ A  A K  ++++ED+
Sbjct: 125 KDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 157


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  120 bits (302), Expect = 5e-28
 Identities = 71/153 (46%), Positives = 93/153 (60%), Gaps = 5/153 (3%)

Query: 16  KSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPK 71
           K P  S + S +    + +   +  +  K D  H +REMK   P K   K K  DP+APK
Sbjct: 6   KLPGRSTRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPK 65

Query: 72  RPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYE 131
            PP  FF+FSSE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K  KLKEKYE
Sbjct: 66  SPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYE 124

Query: 132 KDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDE 164
           KD+A    KGK D +K+ A  A K  ++++ED+
Sbjct: 125 KDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 157


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  111 bits (278), Expect = 3e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 34  KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNP 93
           K+KS    +  T +       +   K   K +DP+APK PP  FF+FSSE  PKIK  +P
Sbjct: 57  KKKSSTQMLQSTSQSFLRSAQRAETK--MKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HP 113

Query: 94  GISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA 153
           G+SI DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A
Sbjct: 114 GLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA 173

Query: 154 WKKVEEEDEDE 164
            K  ++++ED+
Sbjct: 174 EKCKKKKEEDK 184


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  103 bits (256), Expect = 1e-22
 Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 2/118 (1%)

Query: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKK--KKDPSAPKRPPSG 76
           EFS+KCSE+W+++S  EK+K++ +AK DK     EM       KK  K+DP  P+RPPS 
Sbjct: 40  EFSRKCSEKWRSISKHEKAKYEALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSS 99

Query: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134
           F LF  +   ++K  NP  S+  VAK  G+MW+   D EK PY  + A L+ KY +++
Sbjct: 100 FLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEEL 157



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 70  PKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKTAKLK 127
           PK   S +  F    R K K   P   +G  + ++K  E W +++  EK  Y       K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 128 EKYEKDVADSKSKGK 142
            +Y++++ +   K K
Sbjct: 69  ARYQEEMMNYVGKRK 83


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 15  DKSPEFSKKCSERWKTMSG---KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPK 71
           D + EF    S    +  G   +++ K  ++ K  K+  DR+ +      KK KDP+APK
Sbjct: 490 DVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKA-KMAKDRKSRKKPVEVKKGKDPNAPK 548

Query: 72  RPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYE 131
           RP S + L+ +  R KIKS +PGISI D++KK GE+W  ++  +K+ +  K    +  YE
Sbjct: 549 RPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYE 608

Query: 132 KDVADSKSKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQS 175
           K + + +  G+ + SKR      KKV+ + E +    R  + +S
Sbjct: 609 KAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKS 651


>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
          Length = 621

 Score = 70.9 bits (172), Expect = 6e-13
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 44  KTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKK 103
           KT  V   ++ K P K  +KKKDP+ P++P S + LF  + +  IK  NP  + G+V+K 
Sbjct: 199 KTVVVEAGKKQKAPKK--RKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKI 256

Query: 104 LGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 138
           +  MW++L + +KQ Y  KT   K++Y K +A  K
Sbjct: 257 VASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYK 291


>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score = 70.5 bits (171), Expect = 8e-13
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 17  SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73
           SP  SK  +    + + +E+S+       +K       ++ K P K  KKKKDP+ P++P
Sbjct: 192 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 249

Query: 74  PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKD 133
            S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y  KT   K++Y K 
Sbjct: 250 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKA 309

Query: 134 VA 135
           +A
Sbjct: 310 LA 311


>gi|149408141 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score = 70.5 bits (171), Expect = 8e-13
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 17  SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73
           SP  SK  +    + + +E+S+       +K       ++ K P K  KKKKDP+ P++P
Sbjct: 150 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 207

Query: 74  PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKD 133
            S + LF  + +  IK  NP  + GDV+K +  MW++L + +KQ Y  KT   K++Y K 
Sbjct: 208 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKA 267

Query: 134 VA 135
           +A
Sbjct: 268 LA 269


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.307    0.125    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,831,466
Number of Sequences: 37866
Number of extensions: 383071
Number of successful extensions: 3330
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 2682
Number of HSP's gapped (non-prelim): 637
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.