Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NFATC2 Sequence: fasta or formatted (901aa) NCBI GI: 209862843
Description:

nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 isoform D

Referenced in:

T cells

Other entries for this name:
alt prot [921aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
alt prot [925aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         69           2
 C cysteine            1.9         17           1
 D aspartate           3.6         32           2
 E glutamate           5.1         46           2
 F phenylalanine       2.2         20           1
 G glycine             6.8         61           2
 H histidine           3.4         31           2
 I isoleucine          4.7         42           1
 K lysine              3.7         33           1
 L leucine             7.7         69           2
 M methionine          1.8         16           1
 N asparagine          2.9         26           2
 P proline            12.3        111           3
 Q glutamine           6.2         56           3
 R arginine            5.4         49           2
 S serine             10.2         92           3
 T threonine           5.2         47           3
 V valine              5.8         52           2
 W tryptophan          0.6          5           1
 Y tyrosine            3.0         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of activated T-cells, cytoplasmic, c... 
NFATC2                0.974   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.959   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC1                0.313   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.304   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.304   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.274   nuclear factor of activated T-cells, cytosolic compo...
NFATC3                0.234   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.234   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.234   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.234   nuclear factor of activated T-cells, cytoplasmic, cal...
NFATC4                0.220   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.220   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC1                0.199   nuclear factor of activated T-cells, cytosolic compo...
NFAT5                 0.108   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.108   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.108   nuclear factor of activated T-cells 5 isoform d [Ho...
NFAT5                 0.108   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.108   nuclear factor of activated T-cells 5 isoform a [Hom...
MLL2                  0.020   myeloid/lymphoid or mixed-lineage leukemia 2 
NACA                  0.019   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
SYNJ1                 0.015   synaptojanin 1 isoform a 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.015   PREDICTED: hypothetical protein LOC80164 
SYNJ1                 0.014   synaptojanin 1 isoform b 
PTPN23                0.014   protein tyrosine phosphatase, non-receptor type 23 [...
SYNJ1                 0.014   synaptojanin 1 isoform d 
ZNF828                0.014   zinc finger protein 828 
POLR2A                0.014   DNA-directed RNA polymerase II A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press