Guide to the Human Genome
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Name: NFATC2 Sequence: fasta or formatted (925aa) NCBI GI: 27886541
Description:

nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 isoform C

Referenced in:

T cells

Other entries for this name:
alt prot [901aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
alt prot [921aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         70           2
 C cysteine            1.7         16           1
 D aspartate           3.8         35           2
 E glutamate           5.5         51           3
 F phenylalanine       2.4         22           1
 G glycine             7.0         65           2
 H histidine           3.1         29           2
 I isoleucine          4.4         41           2
 K lysine              3.7         34           1
 L leucine             7.2         67           2
 M methionine          1.6         15           1
 N asparagine          3.2         30           2
 P proline            12.9        119           3
 Q glutamine           6.2         57           3
 R arginine            5.3         49           2
 S serine             10.1         93           3
 T threonine           5.1         47           3
 V valine              5.6         52           2
 W tryptophan          0.4          4           1
 Y tyrosine            3.1         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of activated T-cells, cytoplasmic, ca... 
NFATC2                0.981   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.932   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC1                0.313   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.299   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.296   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.267   nuclear factor of activated T-cells, cytosolic compo...
NFATC3                0.228   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.228   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.228   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.228   nuclear factor of activated T-cells, cytoplasmic, cal...
NFATC4                0.217   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC4                0.216   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC1                0.193   nuclear factor of activated T-cells, cytosolic compo...
NFAT5                 0.104   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.104   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.104   nuclear factor of activated T-cells 5 isoform d [Ho...
NFAT5                 0.104   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.104   nuclear factor of activated T-cells 5 isoform a [Hom...
MLL2                  0.020   myeloid/lymphoid or mixed-lineage leukemia 2 
NACA                  0.018   nascent polypeptide-associated complex alpha subuni...
KIAA1522              0.016   hypothetical protein LOC57648 
PTPN23                0.015   protein tyrosine phosphatase, non-receptor type 23 [...
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
SYNJ1                 0.015   synaptojanin 1 isoform a 
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
SYNJ1                 0.014   synaptojanin 1 isoform b 
SYNJ1                 0.014   synaptojanin 1 isoform d 
ZNF828                0.014   zinc finger protein 828 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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