Guide to the Human Genome
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Search of human proteins with 239741594

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741594 PREDICTED: hypothetical protein XP_002342244 [Homo
sapiens]
         (342 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo ...   725   0.0  
gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo ...   725   0.0  
gi|239741594 PREDICTED: hypothetical protein XP_002342244 [Homo ...   725   0.0  
gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]            37   0.033
gi|14211869 late cornified envelope 3D [Homo sapiens]                  37   0.033
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i...    35   0.074
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s...    35   0.074
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]            34   0.17 
gi|4505719 peroxisomal biogenesis factor 11 beta [Homo sapiens]        34   0.22 
gi|89038927 PREDICTED: similar to U2 small nuclear RNA auxillary...    34   0.22 
gi|89038281 PREDICTED: similar to U2 small nuclear RNA auxillary...    34   0.22 
gi|12056465 fibrillarin [Homo sapiens]                                 34   0.22 
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]     34   0.22 
gi|55956788 nucleolin [Homo sapiens]                                   33   0.28 
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s...    33   0.28 
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|13994190 frizzled 8 [Homo sapiens]                                  33   0.28 
gi|109452587 family with sequence similarity 98, member B isofor...    33   0.28 
gi|57864582 hornerin [Homo sapiens]                                    33   0.37 
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ...    33   0.37 
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]            33   0.37 
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]            33   0.37 
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ...    33   0.37 
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...    33   0.37 
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...    33   0.37 
gi|28376656 zinc finger, X-linked, duplicated B [Homo sapiens]         33   0.37 
gi|59806361 hypothetical protein LOC387104 [Homo sapiens]              32   0.63 
gi|119395750 keratin 1 [Homo sapiens]                                  32   0.82 

>gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo
           sapiens]
          Length = 342

 Score =  725 bits (1872), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA 60
           MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA
Sbjct: 1   MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA 60

Query: 61  GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR 120
           GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR
Sbjct: 61  GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR 120

Query: 121 EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI 180
           EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI
Sbjct: 121 EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI 180

Query: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG
Sbjct: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240

Query: 241 LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW 300
           LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW
Sbjct: 241 LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW 300

Query: 301 RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW 342
           RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW
Sbjct: 301 RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW 342


>gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo
           sapiens]
          Length = 342

 Score =  725 bits (1872), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA 60
           MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA
Sbjct: 1   MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA 60

Query: 61  GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR 120
           GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR
Sbjct: 61  GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR 120

Query: 121 EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI 180
           EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI
Sbjct: 121 EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI 180

Query: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG
Sbjct: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240

Query: 241 LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW 300
           LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW
Sbjct: 241 LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW 300

Query: 301 RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW 342
           RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW
Sbjct: 301 RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW 342


>gi|239741594 PREDICTED: hypothetical protein XP_002342244 [Homo
           sapiens]
          Length = 342

 Score =  725 bits (1872), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA 60
           MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA
Sbjct: 1   MECLSNIQDRQKKLHLKRYLFHKTREPLNWNPGQHANEEIKTKKLVGSSPHHTPGSWAVA 60

Query: 61  GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR 120
           GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR
Sbjct: 61  GLYQNSLLPISPRTTPLEALSLHCGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRR 120

Query: 121 EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI 180
           EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI
Sbjct: 121 EPGAECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTSKPNQPDKSTTLALGYI 180

Query: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG
Sbjct: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240

Query: 241 LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW 300
           LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW
Sbjct: 241 LPLQHLQLLQVFVLVLLFLLLFFLLVLGLPHELVLERGLRPGWAVRGRDQRRLVQVFHGW 300

Query: 301 RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW 342
           RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW
Sbjct: 301 RVEMMLQLLPPPPGPRLRAAGGCGGWGGLRGAGPTEPRDLLW 342


>gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 263

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 4/135 (2%)

Query: 107 KRKGATHASQE-VRREPG-AECRPTDPQQNCTFSKGATQTGRQKHLLKISGCQGLSFLTS 164
           +R GA  AS    R  PG A  R    +  C    G  +      L++     G +   +
Sbjct: 116 RRTGAAGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAA--RA 173

Query: 165 KPNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSG 224
           +P  P  +  L L     +  G+    +  +     R   RR  A +P  LP R  G  G
Sbjct: 174 RPASPAPARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGG 233

Query: 225 RQGGGGHWGRGQPGG 239
           R+ GG   G+G   G
Sbjct: 234 RRAGGARAGQGAHTG 248


>gi|14211869 late cornified envelope 3D [Homo sapiens]
          Length = 92

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 166 PNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRG--WRGHGRRHRARVPRRLPLRGDGGS 223
           P  P KS    L           GG  CG    G  +  H RRH  R  R+ P   D GS
Sbjct: 19  PKCPPKSPVQCLPPASSGCAPSSGG--CGPSSEGGCFLNHHRRHH-RCRRQRPNSCDRGS 75

Query: 224 GRQGGGGHWGRGQPG 238
           G+QGGG   G G  G
Sbjct: 76  GQQGGGSGCGHGSGG 90


>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
           isoform [Homo sapiens]
          Length = 302

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 189 GGRDCGSRQRGWRGHGR-RHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
           GG  CG  +   RG GR R R R   R P  G G  G   GGG  G G  GGG P
Sbjct: 70  GGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGG--DGGGCGGGGSGGGGAP 122


>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
           sapiens]
          Length = 411

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 189 GGRDCGSRQRGWRGHGR-RHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
           GG  CG  +   RG GR R R R   R P  G G  G   GGG  G G  GGG P
Sbjct: 70  GGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGG--DGGGCGGGGSGGGGAP 122


>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 334

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 45/164 (27%), Positives = 57/164 (34%), Gaps = 20/164 (12%)

Query: 84  CGWVNVDVFHSASSPRAQEEGEGKRKGATHASQEVRREPGAECRPTDPQQNCTFSKGATQ 143
           CG     V    SS      G G R+ A  A  E  +E G   R   P    T S+G T+
Sbjct: 15  CGSDTAGVTCRVSSQDGDRRGLG-REAAPGAPAEGEKEKGKNSRRPRP----TCSRGRTE 69

Query: 144 TGRQKHLLKISGCQGLSFLTSKPNQP-DKSTTLALGYIPGSYYGEL----GGRDCGSRQR 198
            GR +        +G          P  +    A   +  + +  L            +R
Sbjct: 70  RGRVE--------RGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121

Query: 199 GWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
           G R  G R  A  P R  LRG  G+      GH GR  P GG P
Sbjct: 122 GLRREGPRRHA--PPRKQLRGRRGAAGLVSAGHLGREPPRGGGP 163


>gi|4505719 peroxisomal biogenesis factor 11 beta [Homo sapiens]
          Length = 259

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 213 RRLPLRGDGGSGRQGGGGHWGRGQPGGGLPLQHLQL-LQVFVL 254
           RRL   G G  G    GG  G G PGGGLP   L+L LQV +L
Sbjct: 155 RRLKGSGGGVPGGSETGGLGGPGTPGGGLPQLALKLRLQVLLL 197


>gi|89038927 PREDICTED: similar to U2 small nuclear RNA auxillary
           factor 1 [Homo sapiens]
          Length = 243

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 187 ELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           EL    CG R++       R R+R   R    GD G G  GGGG  G G PGGG
Sbjct: 178 ELRRELCGQRRKK-----HRSRSRSRERHSRSGDRGHGDGGGGG--GGGGPGGG 224


>gi|89038281 PREDICTED: similar to U2 small nuclear RNA auxillary
           factor 1 [Homo sapiens]
          Length = 243

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 187 ELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           EL    CG R++       R R+R   R    GD G G  GGGG  G G PGGG
Sbjct: 178 ELRRELCGQRRKK-----HRSRSRSRERHSRSGDRGHGDGGGGG--GGGGPGGG 224


>gi|12056465 fibrillarin [Homo sapiens]
          Length = 321

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 10/56 (17%)

Query: 185 YGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           +G+ GGR       G RG G   R R        G GG G  GGGG  G G+ GGG
Sbjct: 18  FGDRGGRGGRGGFGGGRGRGGGFRGR--------GRGGGG--GGGGGGGGGRGGGG 63



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 15/55 (27%)

Query: 186 GELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           G  GGR  G   RG RG               RG  G GR  GGG  GRG+ GGG
Sbjct: 10  GGFGGRG-GFGDRGGRGG--------------RGGFGGGRGRGGGFRGRGRGGGG 49


>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
          Length = 1035

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 40/141 (28%), Positives = 51/141 (36%), Gaps = 14/141 (9%)

Query: 99  RAQEEGEGK-----RKGATHASQEVRREPGAECRPTDPQQNCTFSKGATQTGRQKHLLKI 153
           R+ EEG+G      R+     S + R E   E         C F +G    G +K   + 
Sbjct: 136 RSIEEGDGAFGRSPREIQRSQSWDDRGERRFEKSARRDGARCGFEEGGA--GPRKEHARS 193

Query: 154 SGCQGLSFLTSKPNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRGWRGHGRRHRARVPR 213
                 S    +  + + S  L  G             D G R  GWR HG R R     
Sbjct: 194 DSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSASPDGGPRSAGWREHGERRR---KF 250

Query: 214 RLPLRGD-GGSGRQ---GGGG 230
              LRGD GG G +   GGGG
Sbjct: 251 EFDLRGDRGGCGEEEGRGGGG 271


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 25/56 (44%), Positives = 25/56 (44%), Gaps = 10/56 (17%)

Query: 186 GELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWG-RGQPGGG 240
           G  GGR  G    G RG GR  R          G GG GR G GG  G RG  GGG
Sbjct: 651 GGFGGRGGGRGGFGGRGGGRGGRG---------GFGGRGRGGFGGRGGFRGGRGGG 697


>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
           sapiens]
          Length = 940

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 194 GSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGL 241
           G   RG  G G       P   P RG  G GR GGG   GRG PGGG+
Sbjct: 701 GPYHRGRGGRGGNEPPPPPP--PFRGARG-GRSGGGPPNGRGGPGGGM 745



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 181 PGSYY---GELGGRDCGSRQRGWRG-HGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQ 236
           PG Y+   G  GG +       +RG  G R     P     RG  G G  GGGGH     
Sbjct: 700 PGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNG---RGGPGGGMVGGGGHRPHEG 756

Query: 237 PGGGL 241
           PGGG+
Sbjct: 757 PGGGM 761



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 10/61 (16%)

Query: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           PG   G   G        G  G G R         P  G GGS   GGGGH     PGGG
Sbjct: 757 PGGGMGNSSGHRPHEGPGGGMGSGHR---------PHEGPGGS-MGGGGGHRPHEGPGGG 806

Query: 241 L 241
           +
Sbjct: 807 I 807



 Score = 28.9 bits (63), Expect = 7.0
 Identities = 23/60 (38%), Positives = 24/60 (40%), Gaps = 12/60 (20%)

Query: 186 GELGGRDCGSRQR----GWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGL 241
           G  GG   G R      G  G G  HR       P  G GG G  GG GH     PGGG+
Sbjct: 772 GPGGGMGSGHRPHEGPGGSMGGGGGHR-------PHEGPGG-GISGGSGHRPHEGPGGGM 823


>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 198 RGWRGHGRR----HRARVPRRLPLRGDGGSGRQGGGG 230
           RGW G G      H+  +P    LRG GG    GGGG
Sbjct: 175 RGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGG 211


>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 198 RGWRGHGRR----HRARVPRRLPLRGDGGSGRQGGGG 230
           RGW G G      H+  +P    LRG GG    GGGG
Sbjct: 175 RGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGG 211


>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 198 RGWRGHGRR----HRARVPRRLPLRGDGGSGRQGGGG 230
           RGW G G      H+  +P    LRG GG    GGGG
Sbjct: 175 RGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGG 211


>gi|13994190 frizzled 8 [Homo sapiens]
          Length = 694

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 6/57 (10%)

Query: 194 GSRQRGWRGHGRRHRARVPRRLPLRGDGGS------GRQGGGGHWGRGQPGGGLPLQ 244
           G +     GHGR   AR P R   RG GG        R GGGG   R   GG  P +
Sbjct: 173 GEQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGKARPPGGGAAPCE 229



 Score = 32.0 bits (71), Expect = 0.82
 Identities = 14/22 (63%), Positives = 14/22 (63%)

Query: 219 GDGGSGRQGGGGHWGRGQPGGG 240
           G GG G  GGGG  G G PGGG
Sbjct: 640 GGGGPGGGGGGGPGGGGGPGGG 661


>gi|109452587 family with sequence similarity 98, member B isoform 1
           [Homo sapiens]
          Length = 433

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 15/22 (68%), Positives = 15/22 (68%)

Query: 219 GDGGSGRQGGGGHWGRGQPGGG 240
           G GG GR GGGG  GRG  GGG
Sbjct: 341 GGGGGGRGGGGGGGGRGGWGGG 362



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 15/62 (24%)

Query: 178 GYIPGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQP 237
           G+  G   G  GG   G  + GW G G              G GG G  GGGG WG G  
Sbjct: 337 GWGGGGGGGGRGGGGGGGGRGGWGGGGG-------------GWGGGG--GGGGGWGGGGG 381

Query: 238 GG 239
           GG
Sbjct: 382 GG 383



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/42 (42%), Positives = 19/42 (45%)

Query: 199 GWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           GW G G   R     R    G GG G +GG G  G G P GG
Sbjct: 375 GWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGG 416



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)

Query: 219 GDGGSGRQG---GGGHWGRGQPGGG 240
           G GG GR G   GGG WG G  GGG
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGG 374



 Score = 28.9 bits (63), Expect = 7.0
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)

Query: 307 QLLPPPPG-----PRLRAAGGCGGWGGLRGAG 333
           ++ PPPP       R    GG GGWGG  G G
Sbjct: 314 EIEPPPPEMPPWQKRQEGGGGRGGWGGGGGGG 345



 Score = 28.9 bits (63), Expect = 7.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 3/26 (11%)

Query: 218 RGDGGSGR---QGGGGHWGRGQPGGG 240
           R +GG GR    GGGG  GRG  GGG
Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGG 353


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 18/160 (11%)

Query: 93   HSASSPRAQEEGEGKRKGATHASQEVRR------EPGAECRPTDPQQNCTFSKGATQTGR 146
            H ASS ++   G+    G++ +S   R+       PG   R +  +Q+ ++ +  + +GR
Sbjct: 1562 HGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR 1620

Query: 147  Q----KHLLKISGCQGLSFLTSKPNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRGWRG 202
                 +H   +    G     S   Q    +    G    S YG+ G R  G   RG R 
Sbjct: 1621 SSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS-GQSSRGER- 1678

Query: 203  HGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
            HG   R+         G  GSG +   GH  +G   G  P
Sbjct: 1679 HGSSSRSS-----SRYGQHGSGSRQSSGHGRQGSGSGQSP 1713



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 18/160 (11%)

Query: 93   HSASSPRAQEEGEGKRKGATHASQEVRR------EPGAECRPTDPQQNCTFSKGATQTGR 146
            H ASS ++   G+    G++ +S   R+       PG   R +  +Q+ ++ +  + +GR
Sbjct: 1092 HGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR 1150

Query: 147  Q----KHLLKISGCQGLSFLTSKPNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRGWRG 202
                 +H   +    G     S   Q    +    G    S YG+ G R  G   RG R 
Sbjct: 1151 SSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS-GQSSRGER- 1208

Query: 203  HGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
            HG    +         G  GSG +   GH  +G   G  P
Sbjct: 1209 HGSSSGSSSHY-----GQHGSGSRQSSGHGRQGSGSGHSP 1243



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 18/160 (11%)

Query: 93   HSASSPRAQEEGEGKRKGATHASQEVRR------EPGAECRPTDPQQNCTFSKGATQTGR 146
            H ASS ++   G+    G++ +S   R+       PG   R +  +Q+ ++ +  + +GR
Sbjct: 2032 HGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR 2090

Query: 147  Q----KHLLKISGCQGLSFLTSKPNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRGWRG 202
                 +H   +    G     S   Q    +    G    S YG+ G R  G   RG R 
Sbjct: 2091 SSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS-GQSSRGER- 2148

Query: 203  HGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
            HG    +         G  GSG +   GH  +G   G  P
Sbjct: 2149 HGSSSGSS-----SRYGQHGSGSRQSSGHGRQGSGSGHSP 2183



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 18/160 (11%)

Query: 93   HSASSPRAQEEGEGKRKGATHASQEVRR------EPGAECRPTDPQQNCTFSKGATQTGR 146
            H ASS ++   G+    G++ +S   R+       PG   R +  +Q+ ++ +  + +GR
Sbjct: 2502 HGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR 2560

Query: 147  Q----KHLLKISGCQGLSFLTSKPNQPDKSTTLALGYIPGSYYGELGGRDCGSRQRGWRG 202
                 +H   +    G     S   Q    +    G    S YG+ G R  G   RG R 
Sbjct: 2561 SSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS-GQSSRGER- 2618

Query: 203  HGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGLP 242
            HG    +         G  GSG +   GH  +G   G  P
Sbjct: 2619 HGSSSGSSSHY-----GQHGSGSRQSSGHGRQGSGSGQSP 2653


>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
           sapiens]
          Length = 600

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 190 GRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGL 241
           GR   S +R  RGHGR  +AR     P R  G  G    G H G G P G L
Sbjct: 381 GRPGQSLRRSGRGHGRGIQARDTGGGP-RNRGQEGTHASGRHAGEGAPHGKL 431


>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 24/58 (41%), Positives = 24/58 (41%), Gaps = 9/58 (15%)

Query: 194 GSRQRGWRGHGRRHRARVPRRL---------PLRGDGGSGRQGGGGHWGRGQPGGGLP 242
           GS Q    G GR    R PRR          P RG    GR GGG     G  GGGLP
Sbjct: 23  GSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGRSGGGPAAQSGGDGGGLP 80


>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 510

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 190 GRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGL 241
           GR   S +R  RGHGR  +AR     P R  G  G    G H G G P G L
Sbjct: 238 GRPGQSLRRSGRGHGRGIQARDTGGGP-RNRGQEGTHASGRHAGEGAPHGKL 288


>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
           sapiens]
          Length = 457

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 190 GRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGGL 241
           GR   S +R  RGHGR  +AR     P R  G  G    G H G G P G L
Sbjct: 238 GRPGQSLRRSGRGHGRGIQARDTGGGP-RNRGQEGTHASGRHAGEGAPHGKL 288


>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
           [Homo sapiens]
          Length = 994

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 18/64 (28%)

Query: 185 YGELGGRDCGSRQRGWR-------GHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQP 237
           Y +  GRD G R  G         GHG             RG GG G  GGGG  GRG+ 
Sbjct: 5   YHQNWGRDGGPRSSGGGYGGGPAGGHGGN-----------RGSGGGGGGGGGGRGGRGRH 53

Query: 238 GGGL 241
            G L
Sbjct: 54  PGHL 57


>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
           [Homo sapiens]
          Length = 1008

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 18/64 (28%)

Query: 185 YGELGGRDCGSRQRGWR-------GHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQP 237
           Y +  GRD G R  G         GHG             RG GG G  GGGG  GRG+ 
Sbjct: 5   YHQNWGRDGGPRSSGGGYGGGPAGGHGGN-----------RGSGGGGGGGGGGRGGRGRH 53

Query: 238 GGGL 241
            G L
Sbjct: 54  PGHL 57


>gi|28376656 zinc finger, X-linked, duplicated B [Homo sapiens]
          Length = 803

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 211 VPRRLPLRGDGGSGRQGGGG--HWGRGQPGGGLPLQHLQLLQ 250
           +P R  L+G GG G   GGG  H G   P G +P + L LL+
Sbjct: 7   LPARGTLQGGGGGGIPAGGGRVHRGPDSPAGQVPTRRLLLLR 48


>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
          Length = 947

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 9/66 (13%)

Query: 181 PGSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRL----PLRGDGGSGRQGGGGHWGRGQ 236
           P +    LGGR  G  +        R    VP +L    PL   GG G +GGG   G G+
Sbjct: 128 PAATLAALGGRRPGPPEEP-----PRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGE 182

Query: 237 PGGGLP 242
             GG P
Sbjct: 183 REGGAP 188


>gi|119395750 keratin 1 [Homo sapiens]
          Length = 644

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 13/59 (22%)

Query: 182 GSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGGG 240
           GS YG  GG   GS   G  G G              G GGS    GGG +G G  GGG
Sbjct: 529 GSSYGS-GGGSYGSGGGGGGGRGSY------------GSGGSSYGSGGGSYGSGGGGGG 574



 Score = 28.9 bits (63), Expect = 7.0
 Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 14/58 (24%)

Query: 182 GSYYGELGGRDCGSRQRGWRGHGRRHRARVPRRLPLRGDGGSGRQGGGGHWGRGQPGG 239
           GSY    GG   GS   G    G R              GGSG  GGG   GRG  GG
Sbjct: 564 GSYGSGGGGGGHGSYGSGSSSGGYR--------------GGSGGGGGGSSGGRGSGGG 607



 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)

Query: 219 GDGGSGRQGGGGHWGRGQPGGG 240
           G GGS    GGG +G G  GGG
Sbjct: 526 GSGGSSYGSGGGSYGSGGGGGG 547


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.141    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,342,991
Number of Sequences: 37866
Number of extensions: 964017
Number of successful extensions: 6984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 5792
Number of HSP's gapped (non-prelim): 1021
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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