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Search of human proteins with 239740948
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo
sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo sap... 686 0.0
gi|239756858 PREDICTED: hypothetical protein [Homo sapiens] 102 5e-22
gi|32307177 forkhead box G1 [Homo sapiens] 50 3e-06
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 49 5e-06
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 49 5e-06
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 49 5e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 49 5e-06
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 49 6e-06
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 48 1e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 48 1e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 3e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 3e-05
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 47 3e-05
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 47 3e-05
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 46 4e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 46 4e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 46 4e-05
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 46 5e-05
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 46 5e-05
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 46 5e-05
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 46 5e-05
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 45 9e-05
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 45 9e-05
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 45 1e-04
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 45 1e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 45 1e-04
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 45 1e-04
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 45 1e-04
>gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo
sapiens]
Length = 328
Score = 686 bits (1771), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MCVSSRERPFAVKFKARARVCLGGSFTGINHVLQAAFLNRTPKEKLANEAAAPGEGPPHT 60
MCVSSRERPFAVKFKARARVCLGGSFTGINHVLQAAFLNRTPKEKLANEAAAPGEGPPHT
Sbjct: 1 MCVSSRERPFAVKFKARARVCLGGSFTGINHVLQAAFLNRTPKEKLANEAAAPGEGPPHT 60
Query: 61 PALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGERLLFLL 120
PALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGERLLFLL
Sbjct: 61 PALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGERLLFLL 120
Query: 121 FRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAA 180
FRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAA
Sbjct: 121 FRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAA 180
Query: 181 SFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENG 240
SFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENG
Sbjct: 181 SFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENG 240
Query: 241 ASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCTSICGGRGAR 300
ASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCTSICGGRGAR
Sbjct: 241 ASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCTSICGGRGAR 300
Query: 301 PQLPRTCGDGTQHCGRGKPALAAAEEWP 328
PQLPRTCGDGTQHCGRGKPALAAAEEWP
Sbjct: 301 PQLPRTCGDGTQHCGRGKPALAAAEEWP 328
>gi|239756858 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 102 bits (254), Expect = 5e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 35 AAFLNRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFK 81
AAFLNRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFK
Sbjct: 13 AAFLNRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFK 59
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 50.1 bits (118), Expect = 3e-06
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
Query: 164 HRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRR-------DDSASLRCSVLPPARRAVA 216
H P PAP+PPPP QP P P PP+ DD + + PP A
Sbjct: 54 HHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPA 113
Query: 217 AAL---------GKWRPSS--FSLPPFNLKRRENGASERAGERRGQGEEGQ 256
AAL GK P L P +E GA E++G GE G+
Sbjct: 114 AALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGK 164
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 49.3 bits (116), Expect = 5e-06
Identities = 79/278 (28%), Positives = 96/278 (34%), Gaps = 63/278 (22%)
Query: 66 TPSPDPQQGSPERPFKVPGVFSTLPCL-STALTFRAGGRGRGGGEGGGGERLLFLLFRAL 124
TP+P ++G P P L A T R +G G E G
Sbjct: 62 TPAPPRERGESSSPRG--------PTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113
Query: 125 SRPCSAPTG---PEHGWRPQPGREGGRA-------GAESETA--PPPRTNKHRRLQPEPA 172
P S P G P P+P R GG+ G E+ A P PR K L P
Sbjct: 114 --PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGK---LGKGPP 168
Query: 173 PRPPPPAASFQPGS--------------ALQPP----PAPPRRDDSASLRCSVLPPARRA 214
PRP PP PG+ L+ P P P RR A R LP A A
Sbjct: 169 PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRR---APGRPGCLPTAAAA 225
Query: 215 VAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGA 274
A AL WR LPP +E RR + + +R RR R G G
Sbjct: 226 AADAL--WRSRRAPLPP----------TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHC 273
Query: 275 AAAASVMAPRRSR----CFCTSICGGRGARPQLPRTCG 308
+ A +AP + C S GAR L + G
Sbjct: 274 SRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRG 311
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 49.3 bits (116), Expect = 5e-06
Identities = 79/278 (28%), Positives = 96/278 (34%), Gaps = 63/278 (22%)
Query: 66 TPSPDPQQGSPERPFKVPGVFSTLPCL-STALTFRAGGRGRGGGEGGGGERLLFLLFRAL 124
TP+P ++G P P L A T R +G G E G
Sbjct: 62 TPAPPRERGESSSPRG--------PTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113
Query: 125 SRPCSAPTG---PEHGWRPQPGREGGRA-------GAESETA--PPPRTNKHRRLQPEPA 172
P S P G P P+P R GG+ G E+ A P PR K L P
Sbjct: 114 --PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGK---LGKGPP 168
Query: 173 PRPPPPAASFQPGS--------------ALQPP----PAPPRRDDSASLRCSVLPPARRA 214
PRP PP PG+ L+ P P P RR A R LP A A
Sbjct: 169 PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRR---APGRPGCLPTAAAA 225
Query: 215 VAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGA 274
A AL WR LPP +E RR + + +R RR R G G
Sbjct: 226 AADAL--WRSRRAPLPP----------TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHC 273
Query: 275 AAAASVMAPRRSR----CFCTSICGGRGARPQLPRTCG 308
+ A +AP + C S GAR L + G
Sbjct: 274 SRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRG 311
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 49.3 bits (116), Expect = 5e-06
Identities = 79/278 (28%), Positives = 96/278 (34%), Gaps = 63/278 (22%)
Query: 66 TPSPDPQQGSPERPFKVPGVFSTLPCL-STALTFRAGGRGRGGGEGGGGERLLFLLFRAL 124
TP+P ++G P P L A T R +G G E G
Sbjct: 62 TPAPPRERGESSSPRG--------PTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113
Query: 125 SRPCSAPTG---PEHGWRPQPGREGGRA-------GAESETA--PPPRTNKHRRLQPEPA 172
P S P G P P+P R GG+ G E+ A P PR K L P
Sbjct: 114 --PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGK---LGKGPP 168
Query: 173 PRPPPPAASFQPGS--------------ALQPP----PAPPRRDDSASLRCSVLPPARRA 214
PRP PP PG+ L+ P P P RR A R LP A A
Sbjct: 169 PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRR---APGRPGCLPTAAAA 225
Query: 215 VAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGA 274
A AL WR LPP +E RR + + +R RR R G G
Sbjct: 226 AADAL--WRSRRAPLPP----------TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHC 273
Query: 275 AAAASVMAPRRSR----CFCTSICGGRGARPQLPRTCG 308
+ A +AP + C S GAR L + G
Sbjct: 274 SRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRG 311
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 49.3 bits (116), Expect = 5e-06
Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 29/244 (11%)
Query: 57 PPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGERL 116
PP P A+PSP P++ P P + P + +G
Sbjct: 617 PPPPPKRRASPSPPPKRRVSHSP---PPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREA 673
Query: 117 LFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPP 176
P P P+ P P R G + + +P P T RR+ P P+
Sbjct: 674 RSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKI 733
Query: 177 PPAASFQPGS----------------ALQPPPAPPR--RDDSASLRCSVLPPARRAVAAA 218
AAS P S A + PPAPP + S S S P ++A +
Sbjct: 734 KKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKS-- 791
Query: 219 LGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAA 278
P+ PP N +E G ++ ++ + ++ ++ + + ++ + AAAA
Sbjct: 792 -----PTPSPSPPRN-SDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAV 845
Query: 279 SVMA 282
+ A
Sbjct: 846 TPAA 849
Score = 38.1 bits (87), Expect = 0.011
Identities = 46/164 (28%), Positives = 54/164 (32%), Gaps = 37/164 (22%)
Query: 132 TGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPR-----PPPPAASFQPGS 186
T P R P R APPPR RR P P PR PPP S P
Sbjct: 540 TSPRGRRRRSPSPPPTRRRRSPSPAPPPR----RRRTPTPPPRRRTPSPPPRRRSPSPRR 595
Query: 187 ALQP-----------------PPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFS- 228
P PP PP+R S S PP RR + K R S +
Sbjct: 596 YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPS-----PPPKRRVSHSPPPKQRSSPVTK 650
Query: 229 --LPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGP 270
P + K R+ + R+ + Q R RPR P
Sbjct: 651 RRSPSLSSKHRKGSSPSRSTR---EARSPQPNKRHSPSPRPRAP 691
Score = 36.2 bits (82), Expect = 0.041
Identities = 43/187 (22%), Positives = 67/187 (35%), Gaps = 22/187 (11%)
Query: 122 RALSRPCSAPTGPEHGWRPQPGREGGRA-----GAESETA----------PPPRTNKHRR 166
R + P P P H P R R+ G+ S ++ PP RT+ R
Sbjct: 324 RRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPR 383
Query: 167 LQPEPAPRPPPPAASFQPGSALQPP------PAPPRRDDSASLRCSVLPPARRA-VAAAL 219
+P PP +P PP P P + + + R SV P V
Sbjct: 384 KTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHK 443
Query: 220 GKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAAS 279
G + S S P K + + E G + + QQR + R + G+++++
Sbjct: 444 GTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE 503
Query: 280 VMAPRRS 286
P+RS
Sbjct: 504 DERPKRS 510
Score = 35.8 bits (81), Expect = 0.054
Identities = 56/244 (22%), Positives = 79/244 (32%), Gaps = 37/244 (15%)
Query: 67 PSPDPQQGSPER-PFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGERLLFLLFRALS 125
P P+P++ SPE+ K T P + R+ R R R R+ S
Sbjct: 252 PIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRR-----HRSRS 306
Query: 126 RPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHR-------------------- 165
R S P RP P R PPPR + R
Sbjct: 307 RSYSPRRRPSPRRRPSPRRR----TPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS 362
Query: 166 -RLQPEPAPRPPPPAASFQPGSA--LQPPPAPPRRDDSASLRCSVLPPARRA-VAAALGK 221
+ P+ PP S P L P +PPRR S + P R + +
Sbjct: 363 SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR 422
Query: 222 WRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVM 281
R S S+ P R ++ G + + + R++ L GG AAA +
Sbjct: 423 TRKSRVSVSP---GRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSV 479
Query: 282 APRR 285
RR
Sbjct: 480 QQRR 483
Score = 33.9 bits (76), Expect = 0.20
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 134 PEHGWRPQPGR---EGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQP 190
P P P + E G + PP T RR P PAP PP + P +
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTR--RRRSPSPAP-PPRRRRTPTPPPRRRT 581
Query: 191 PPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPP 231
P PPRR + R S PP +R + + R ++ PP
Sbjct: 582 PSPPPRRRSPSPRRYS--PPIQRRYSPSPPPKRRTASPPPP 620
Score = 32.3 bits (72), Expect = 0.59
Identities = 52/197 (26%), Positives = 67/197 (34%), Gaps = 30/197 (15%)
Query: 122 RALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAAS 181
R+ SR + P H RP+ R R+ + S PR R +P P R PP
Sbjct: 281 RSKSRSRTRSRSPSHT-RPRR-RHRSRSRSYS-----PRRRPSPRRRPSPRRRTPP---- 329
Query: 182 FQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGA 241
PPP RR S R RR+ A+ G SS S K+
Sbjct: 330 -----RRMPPPPRHRRSRSPVRR------RRRSSASLSGSSSSSSSSRSRSPPKKPPKRT 378
Query: 242 SERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCTSICGGRGARP 301
S + R RR R P PP + + R+R S+ G
Sbjct: 379 SSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPG----- 433
Query: 302 QLPRTCGDGTQHCGRGK 318
RT G T+H G K
Sbjct: 434 ---RTSGKVTKHKGTEK 447
Score = 31.6 bits (70), Expect = 1.0
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 139 RPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRD 198
R P R + + + PR + R P P R P+ + P P P P RR
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581
Query: 199 DSASLRCSVLPPARRA 214
S PP RR+
Sbjct: 582 PSP-------PPRRRS 590
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 48.9 bits (115), Expect = 6e-06
Identities = 75/288 (26%), Positives = 100/288 (34%), Gaps = 67/288 (23%)
Query: 54 GEGPPHTPALGATPS--PDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGG 111
G TPA ATP+ P PQ +P P L+ A G G +
Sbjct: 414 GRAARPTPAASATPTAQPLPQPPAPRAPEG-----------DDFLSLHAESDGEGALQVD 462
Query: 112 GGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEP 171
GE P AP + W R R ++R+ P P
Sbjct: 463 LGE------------PAPAPPAADSRWGGLDLRR---------KILTQRRERYRQRSPSP 501
Query: 172 APRPPPPAASFQP---------------------GSALQP-PPAPPRRDDSASLRCSVLP 209
AP P P AA+ P S QP PPAP DS R
Sbjct: 502 APAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRK 561
Query: 210 PARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRG 269
P A ++A + R S S RR + +++R RRG + R +R R RR
Sbjct: 562 PGSHASSSARRRSRSRSRS----RSTRRRSRSTDR---RRGGSRRSRSREKRRRRRRSAS 614
Query: 270 PPGGAAAAASVMAPRRSRCFCTSICGGRGARPQLPRTCGDGTQHCGRG 317
PP A +S + RR R GG G++ + R+ G + G G
Sbjct: 615 PP---PATSSSSSSRRERHRGKHRDGG-GSKKKKKRSRSRGEKRSGDG 658
Score = 33.9 bits (76), Expect = 0.20
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 149 AGAESETAPPPRTNKHRRLQPEPAPRPP-PPAASFQ-------PGSALQPPPAPPRRDD 199
+ A S +P P ++ P P P PP PPA F A PPPAP ++ D
Sbjct: 191 SSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPAPEQKYD 249
Score = 28.9 bits (63), Expect = 6.6
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 16/74 (21%)
Query: 106 GGGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHR 165
GGG GG G ++ +A S CS G + G E E A P T
Sbjct: 930 GGGSGGSGGQVSLKKSKADS--CSQAAGTK-------GAEETSWSGEERAAKVPST---- 976
Query: 166 RLQPEPAPRPPPPA 179
P P PPPPA
Sbjct: 977 ---PPPKAAPPPPA 987
Score = 28.5 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 171 PAPRPPPPAASFQP-----GSALQPPPAPP 195
PAP P P +AS P S+ PPP PP
Sbjct: 184 PAPPPAPSSASSSPSPSPSSSSPSPPPPPP 213
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 48.1 bits (113), Expect = 1e-05
Identities = 38/114 (33%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 48 NEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGG 107
+ A P PP P L TPSP P P P LS T +G GG
Sbjct: 142 SSGAQPSAPPPPAPPLPPTPSPPPPPPPPPP-----------PALSGYTTTNSG----GG 186
Query: 108 GEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRT 161
G G G F+L R LS +AP HG P G + G+ APPP +
Sbjct: 187 GSSGKGHSRDFVLRRDLS--ATAPAAAMHG-APLGGEQRSGTGSPQHPAPPPHS 237
Score = 36.2 bits (82), Expect = 0.041
Identities = 51/194 (26%), Positives = 62/194 (31%), Gaps = 51/194 (26%)
Query: 146 GGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRC 205
GG +GA+ PPP P P PPPP PPP PP
Sbjct: 140 GGSSGAQPSAPPPPAPPL------PPTPSPPPP-----------PPPPPPP-------AL 175
Query: 206 SVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLR 265
S + GK F L RR+ A+ A G G+QR +
Sbjct: 176 SGYTTTNSGGGGSSGKGHSRDFVL------RRDLSATAPAAAMHGAPLGGEQRSGTGSPQ 229
Query: 266 RPRGPPGGA----AAAASVMAPRRSRCFCTSICGGRGARPQLPRTCG---------DGTQ 312
P PP A +A+ + P S GG P L T G +G
Sbjct: 230 HPAPPPHSAGMFISASGTYAGPDGS--------GGPALFPALHDTPGAPGGHPHPLNGQM 281
Query: 313 HCGRGKPALAAAEE 326
G A AAA E
Sbjct: 282 RLGLAAAAAAAAAE 295
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 48.1 bits (113), Expect = 1e-05
Identities = 69/249 (27%), Positives = 84/249 (33%), Gaps = 53/249 (21%)
Query: 52 APGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGG 111
AP P PA A +P P P P V + A RA
Sbjct: 110 APPRAPRGAPAAAAAAAPPPTPAPPPPPAPV----------AAAAPARAP---------- 149
Query: 112 GGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEP 171
RA + +AP P QPG RA + APPP + P
Sbjct: 150 ----------RAAAAAATAPPSPGPA---QPGPRAQRAAPLA--APPPAPAAPPAVAPPA 194
Query: 172 APR--PPPPAASFQPGSALQP---PPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSS 226
PR PPP A+ +P L P PPAPP++ + PP A G RP S
Sbjct: 195 GPRRAPPPAVAAREP--PLPPPPQPPAPPQQQQPPPPQPQ--PPPEGGAVRAGGAARPVS 250
Query: 227 FSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRR--------PRGPPGGAAAAA 278
GA R R QG ++ R RL R PRG G A A
Sbjct: 251 LR-EVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAPPA 309
Query: 279 SVMAPRRSR 287
+ P RS+
Sbjct: 310 ASARPSRSK 318
Score = 32.7 bits (73), Expect = 0.45
Identities = 38/117 (32%), Positives = 45/117 (38%), Gaps = 37/117 (31%)
Query: 140 PQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPP-PAASFQPG-------SALQPP 191
P P R A A + A PP P PAP PPP P A+ P +A P
Sbjct: 109 PAPPRAPRGAPAAAAAAAPP---------PTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 192 PAP------PRRDDSASLRC---------SVLPPA--RRAVAAALGKWRPSSFSLPP 231
P+P PR +A L +V PPA RRA A+ P LPP
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREP---PLPP 213
Score = 30.8 bits (68), Expect = 1.7
Identities = 32/116 (27%), Positives = 37/116 (31%), Gaps = 20/116 (17%)
Query: 179 AASFQPGSALQPPPAPPRRDDSASLRCSVL--------PPARRAVAAALGKWRPSSFSLP 230
AA QP PPAPPR A + PP VAAA P
Sbjct: 96 AARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAP------ 149
Query: 231 PFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRS 286
R A+ A G + G + R L P P A A PRR+
Sbjct: 150 ------RAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRA 199
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/98 (28%), Positives = 34/98 (34%), Gaps = 19/98 (19%)
Query: 139 RPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAP---- 194
R QP R G A PP + R P A PP P A PPPAP
Sbjct: 98 RVQPPRRG---------ATPPAPPRAPRGAPAAAAAAAPP-----PTPAPPPPPAPVAAA 143
Query: 195 -PRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPP 231
P R A+ + PP+ R + + PP
Sbjct: 144 APARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP 181
Score = 29.6 bits (65), Expect = 3.8
Identities = 20/76 (26%), Positives = 27/76 (35%)
Query: 127 PCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGS 186
PC G + G P PG + + + T P+P P PP PG+
Sbjct: 382 PCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPPGKPALPGA 441
Query: 187 ALQPPPAPPRRDDSAS 202
P PP R + S
Sbjct: 442 DGTPFGCPPGRKEKPS 457
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.6 bits (109), Expect = 3e-05
Identities = 55/195 (28%), Positives = 67/195 (34%), Gaps = 25/195 (12%)
Query: 134 PEHGWRPQPGREGGRAGAESETAPPPRTNKH------RRLQPEPAPRPPPPAASFQPGSA 187
P G PQPG R G + PPP+ +H P P P P +A QP S
Sbjct: 462 PPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQ 521
Query: 188 LQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGE 247
PP R PPA R A+ P + PP R+ + + +
Sbjct: 522 AAPPTQGQGRQSRPVAGGPGAPPAARPPASP----SPQRQAGPP-QATRQTSVSGPAPPK 576
Query: 248 RRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCTSICGGRGARPQLPRTC 307
G GQQ R P+ PPG A P R + Q PR
Sbjct: 577 ASGAPPGGQQ-----RQGPPQKPPGPA-------GPTRQASQAGPVPRTGPPTTQQPRPS 624
Query: 308 GDGTQHCGRGKPALA 322
G G GR KP LA
Sbjct: 625 GPGP--AGRPKPQLA 637
Score = 36.6 bits (83), Expect = 0.031
Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 30/160 (18%)
Query: 129 SAPTGPEHGWRPQPGREG-GRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSA 187
++P HG P PG GR ++ PP + +R P+ P P P Q G
Sbjct: 426 ASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQ----QRPPPQGGPPQPGPGPQRQ-GPP 480
Query: 188 LQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGE 247
LQ P P + + L PPA + L + PS S P + AS+ A
Sbjct: 481 LQQRPPPQGQQHLSGLG----PPA----GSPLPQRLPSPTSAP-------QQPASQAAPP 525
Query: 248 RRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSR 287
+GQG + R G PG AA +P R
Sbjct: 526 TQGQGRQS---------RPVAGGPGAPPAARPPASPSPQR 556
Score = 36.6 bits (83), Expect = 0.031
Identities = 50/195 (25%), Positives = 63/195 (32%), Gaps = 27/195 (13%)
Query: 39 NRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTF 98
++ P A + P GPP P P PQ+ P + P P L+
Sbjct: 449 SQQPAGPPAQQRPPPQGGPPQ-------PGPGPQRQGPPLQQRPP------PQGQQHLS- 494
Query: 99 RAGGRGRGGGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP 158
G G G + L A +P S P G Q G GA PP
Sbjct: 495 -----GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPP 549
Query: 159 PRTNKHRRLQPEPAPR------PPPPAASFQP--GSALQPPPAPPRRDDSASLRCSVLPP 210
+ R+ P A R P PP AS P G Q PP P + + S P
Sbjct: 550 ASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 211 ARRAVAAALGKWRPS 225
R + RPS
Sbjct: 610 VPRTGPPTTQQPRPS 624
Score = 29.3 bits (64), Expect = 5.0
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 41 TPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRA 100
TP A + G P +PA PSP G V T + + +
Sbjct: 43 TPGPGTATAERSSGVAPAASPA---APSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQV 99
Query: 101 GGRGRGGGEGGGGERLLFLL 120
GG G G GG R+L ++
Sbjct: 100 GGGSGGAGRGGAASRVLLVI 119
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 3e-05
Identities = 55/195 (28%), Positives = 67/195 (34%), Gaps = 25/195 (12%)
Query: 134 PEHGWRPQPGREGGRAGAESETAPPPRTNKH------RRLQPEPAPRPPPPAASFQPGSA 187
P G PQPG R G + PPP+ +H P P P P +A QP S
Sbjct: 462 PPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQ 521
Query: 188 LQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGE 247
PP R PPA R A+ P + PP R+ + + +
Sbjct: 522 AAPPTQGQGRQSRPVAGGPGAPPAARPPASP----SPQRQAGPP-QATRQTSVSGPAPPK 576
Query: 248 RRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCTSICGGRGARPQLPRTC 307
G GQQ R P+ PPG A P R + Q PR
Sbjct: 577 ASGAPPGGQQ-----RQGPPQKPPGPA-------GPTRQASQAGPVPRTGPPTTQQPRPS 624
Query: 308 GDGTQHCGRGKPALA 322
G G GR KP LA
Sbjct: 625 GPGP--AGRPKPQLA 637
Score = 36.6 bits (83), Expect = 0.031
Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 30/160 (18%)
Query: 129 SAPTGPEHGWRPQPGREG-GRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSA 187
++P HG P PG GR ++ PP + +R P+ P P P Q G
Sbjct: 426 ASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQ----QRPPPQGGPPQPGPGPQRQ-GPP 480
Query: 188 LQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGE 247
LQ P P + + L PPA + L + PS S P + AS+ A
Sbjct: 481 LQQRPPPQGQQHLSGLG----PPA----GSPLPQRLPSPTSAP-------QQPASQAAPP 525
Query: 248 RRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSR 287
+GQG + R G PG AA +P R
Sbjct: 526 TQGQGRQS---------RPVAGGPGAPPAARPPASPSPQR 556
Score = 36.6 bits (83), Expect = 0.031
Identities = 50/195 (25%), Positives = 63/195 (32%), Gaps = 27/195 (13%)
Query: 39 NRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTF 98
++ P A + P GPP P P PQ+ P + P P L+
Sbjct: 449 SQQPAGPPAQQRPPPQGGPPQ-------PGPGPQRQGPPLQQRPP------PQGQQHLS- 494
Query: 99 RAGGRGRGGGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP 158
G G G + L A +P S P G Q G GA PP
Sbjct: 495 -----GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPP 549
Query: 159 PRTNKHRRLQPEPAPR------PPPPAASFQP--GSALQPPPAPPRRDDSASLRCSVLPP 210
+ R+ P A R P PP AS P G Q PP P + + S P
Sbjct: 550 ASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 211 ARRAVAAALGKWRPS 225
R + RPS
Sbjct: 610 VPRTGPPTTQQPRPS 624
Score = 29.3 bits (64), Expect = 5.0
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 41 TPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRA 100
TP A + G P +PA PSP G V T + + +
Sbjct: 43 TPGPGTATAERSSGVAPAASPA---APSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQV 99
Query: 101 GGRGRGGGEGGGGERLLFLL 120
GG G G GG R+L ++
Sbjct: 100 GGGSGGAGRGGAASRVLLVI 119
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 46.6 bits (109), Expect = 3e-05
Identities = 60/239 (25%), Positives = 79/239 (33%), Gaps = 29/239 (12%)
Query: 50 AAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTL------PCLSTALTFRAGGR 103
++ PG+GPP P + P P +P P P FS L P R+
Sbjct: 662 SSLPGQGPP--PYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSL 719
Query: 104 GRGGGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP----P 159
R G G E P + G +PGR + S T P P
Sbjct: 720 SRPGPTEGDAEG-------EAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTP 772
Query: 160 RTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAAL 219
R+ P PPPP + S P P PP D+S + P RR ++
Sbjct: 773 RSQSFALRARRKGPPPPPPK---RLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPA 829
Query: 220 GKWRPSSFSLP--PFNLKRRENGASERAGERRGQGEEG-----QQRLRRLRLRRPRGPP 271
G P P P + E E RG EG + L + +P GPP
Sbjct: 830 GPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPP 888
Score = 34.3 bits (77), Expect = 0.16
Identities = 49/204 (24%), Positives = 68/204 (33%), Gaps = 38/204 (18%)
Query: 33 LQAAFL-----NRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFS 87
LQ A L + TP + PGE PP + PS P QG P P +
Sbjct: 920 LQTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP 979
Query: 88 TL-PCLSTALTFRAGGRGRGGGEGGGGERLLFLLFRALSRPCSAPTG----PEHGWRPQP 142
+ PC L A R G E P +AP P G P+P
Sbjct: 980 PVPPCPGPGLESSAASRWNGETE-----------------PPAAPAALLKVPGAGTAPKP 1022
Query: 143 GREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSAS 202
A +L P PRP PP G+ + P A R + ++S
Sbjct: 1023 ----------VSVACTQLAFSGPKLAPRLGPRPVPPPRPESTGT-VGPGQAQQRLEQTSS 1071
Query: 203 LRCSVLPPARRAVAAALGKWRPSS 226
+ L A +++ + PS+
Sbjct: 1072 SLAAALRAAEKSIGTKEQEGTPSA 1095
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 46.6 bits (109), Expect = 3e-05
Identities = 60/239 (25%), Positives = 79/239 (33%), Gaps = 29/239 (12%)
Query: 50 AAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTL------PCLSTALTFRAGGR 103
++ PG+GPP P + P P +P P P FS L P R+
Sbjct: 744 SSLPGQGPP--PYVFMYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSL 801
Query: 104 GRGGGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP----P 159
R G G E P + G +PGR + S T P P
Sbjct: 802 SRPGPTEGDAEG-------EAEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTP 854
Query: 160 RTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAAL 219
R+ P PPPP + S P P PP D+S + P RR ++
Sbjct: 855 RSQSFALRARRKGPPPPPPK---RLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPA 911
Query: 220 GKWRPSSFSLP--PFNLKRRENGASERAGERRGQGEEG-----QQRLRRLRLRRPRGPP 271
G P P P + E E RG EG + L + +P GPP
Sbjct: 912 GPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPP 970
Score = 34.3 bits (77), Expect = 0.16
Identities = 49/204 (24%), Positives = 68/204 (33%), Gaps = 38/204 (18%)
Query: 33 LQAAFL-----NRTPKEKLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFS 87
LQ A L + TP + PGE PP + PS P QG P P +
Sbjct: 1002 LQTALLAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP 1061
Query: 88 TL-PCLSTALTFRAGGRGRGGGEGGGGERLLFLLFRALSRPCSAPTG----PEHGWRPQP 142
+ PC L A R G E P +AP P G P+P
Sbjct: 1062 PVPPCPGPGLESSAASRWNGETE-----------------PPAAPAALLKVPGAGTAPKP 1104
Query: 143 GREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSAS 202
A +L P PRP PP G+ + P A R + ++S
Sbjct: 1105 ----------VSVACTQLAFSGPKLAPRLGPRPVPPPRPESTGT-VGPGQAQQRLEQTSS 1153
Query: 203 LRCSVLPPARRAVAAALGKWRPSS 226
+ L A +++ + PS+
Sbjct: 1154 SLAAALRAAEKSIGTKEQEGTPSA 1177
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 46.2 bits (108), Expect = 4e-05
Identities = 68/262 (25%), Positives = 88/262 (33%), Gaps = 37/262 (14%)
Query: 45 KLANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRG 104
K + + + P TP SP Q SP P G+ L + R+
Sbjct: 912 KALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSS 971
Query: 105 RGGGEGGGGERLLFLLFRALSRPCSAPTGPEH--------------GWRPQPGREG-GRA 149
G GE L L LS P + P PE G+ P+ G G +
Sbjct: 972 PGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHS 1031
Query: 150 GAESET---APPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCS 206
T APP + H L PA PPPP + G+ PP P R L +
Sbjct: 1032 PGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGT---PPLTPGRLTQDLKLISA 1088
Query: 207 VLPPARRAVAAALGKWRP--SSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRL 264
P + A L + P S S+ F L R G S +G G G
Sbjct: 1089 SQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLG------------ 1136
Query: 265 RRPRGPPGGAAAAASVMAPRRS 286
P G P GA V PR++
Sbjct: 1137 --PPGRPYGAIPGQHVTLPRKT 1156
Score = 40.4 bits (93), Expect = 0.002
Identities = 41/153 (26%), Positives = 55/153 (35%), Gaps = 12/153 (7%)
Query: 51 AAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEG 110
+AP P P+ ++P P GSP P GV +T T F + GG
Sbjct: 866 SAPAGLSPLLPSSSSSPPPGAC-GSPSAPTPSAGVAAT-----TIAGFGHFHKALGGSLS 919
Query: 111 GGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPE 170
LL L P +A P PG GG G PPP +++ P
Sbjct: 920 SSDSPLLTPLQPGARSPQAAQPSPA-----PPGARGG-LGLPEHFLPPPPSSRSPSSSPG 973
Query: 171 PAPRPPPPAASFQPGSALQPPPAPPRRDDSASL 203
+PP + L P PPR+ + SL
Sbjct: 974 QLGQPPGELSLGLATGPLSTPETPPRQPEPPSL 1006
Score = 37.7 bits (86), Expect = 0.014
Identities = 47/171 (27%), Positives = 61/171 (35%), Gaps = 32/171 (18%)
Query: 50 AAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGE 109
+AA G + ALGA S P +G+ G ST A RGGG
Sbjct: 59 SAAAGGTESRSSALGAADSEGPARGA--------GKSSTNGDCRRFRGSLASLGSRGGGS 110
Query: 110 GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQP 169
GG G +G HG E R AE + +P R P
Sbjct: 111 GGTG------------------SGSSHGHLHDSAEER-RLIAEGDASPG-----EDRTPP 146
Query: 170 EPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALG 220
A P P AS QP ++ PP PP+ ++ + SV + AA G
Sbjct: 147 GLAAEPERPGASAQPAASPPPPQQPPQPASASCEQPSVDTAIKVEGGAAAG 197
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 46.2 bits (108), Expect = 4e-05
Identities = 42/147 (28%), Positives = 52/147 (35%), Gaps = 47/147 (31%)
Query: 98 FRAGGRGRGGGE-GGGGERLLFLLFRA------------------------------LSR 126
F GG G GGG GGGG L LF+A ++
Sbjct: 80 FGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAK 139
Query: 127 PCSAPTGPEHGWRPQPGREGG--------------RAGAESETAPPPRTNKHRRLQPEPA 172
P S P+GP P PG G G++ ++ PPP + R +Q P
Sbjct: 140 PFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 173 PR--PPPPAASFQPGSALQPPPAPPRR 197
R PP P QP PPP P R
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPPPFPGNR 226
Score = 45.1 bits (105), Expect = 9e-05
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 125 SRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP-PRTNKHRRLQPEPAPRPPPPAASFQ 183
SRP P P + R R + S + PP P + L P P+ RPPPP
Sbjct: 314 SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP 373
Query: 184 PGSALQPPPAPPRRDDSASLRCSVLP--PARRAVAAALGKWRPSSFSLPP 231
S PPP P R+ S S P P+R V + RP LPP
Sbjct: 374 GRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP---PLPP 420
Score = 43.1 bits (100), Expect = 3e-04
Identities = 54/194 (27%), Positives = 71/194 (36%), Gaps = 38/194 (19%)
Query: 52 APGE--GPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGE 109
+PG GPP P P P P GS +P +P P ST ++ RG
Sbjct: 154 SPGHRSGPPE-PQRNRMPPPRPDVGS--KPDSIPP-----PVPSTPRPIQSSPHNRGSPP 205
Query: 110 GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP-----PRTNKH 164
GG R +P PT P P PG G G S P P +N+
Sbjct: 206 VPGGPR----------QPSPGPTPP-----PFPGNRGTALGGGSIRQSPLSSSSPFSNRP 250
Query: 165 RRLQPEPA------PRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPA-RRAVAA 217
L P P+ P PPPP +P + P PP +++ + + P A +A
Sbjct: 251 P-LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP 309
Query: 218 ALGKWRPSSFSLPP 231
RP LPP
Sbjct: 310 PPPPSRPGPPPLPP 323
Score = 42.4 bits (98), Expect = 6e-04
Identities = 45/164 (27%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 57 PPHTPALGATPSPDPQQGSPE-----RPFKVPGVFS-----TLPCLSTALTFRAGGRGRG 106
PP P PSP + G PE P P V S P ST ++ RG
Sbjct: 143 PPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRG 202
Query: 107 GGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRR 166
GG R +P PT P P PG G G S P ++
Sbjct: 203 SPPVPGGPR----------QPSPGPTPP-----PFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 167 LQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPP 210
+P P PP P+ + +PPP PP + S+ +PP
Sbjct: 248 NRP---PLPPTPSRALDD----KPPPPPPPVGNRPSIHREAVPP 284
Score = 31.6 bits (70), Expect = 1.0
Identities = 53/211 (25%), Positives = 65/211 (30%), Gaps = 48/211 (22%)
Query: 23 GGSFTGINHVLQAAFLNRTPKEKLANEAAAPGEGPPHTPALG--------ATPSPDPQQG 74
GGS + F NR P + A + PP P +G A P P PQ
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRAL-DDKPPPPPPPVGNRPSIHREAVPPPPPQNN 290
Query: 75 SPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGG-----EGGGGERLLFLLFRALSRPCS 129
P P + P S+ R G G + L R LS S
Sbjct: 291 KPPVPS------TPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS 344
Query: 130 APTGPEHGW----------------RPQPGREG--------GRAGAESETAP--PPRTNK 163
P P G R PGR G R G+ S P P ++
Sbjct: 345 TPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSR 404
Query: 164 HRRLQPEPAPRPPPPAASFQPGSALQPPPAP 194
P PRPP P +P + PPP P
Sbjct: 405 SGVDSPRSGPRPPLPPD--RPSAGAPPPPPP 433
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 46.2 bits (108), Expect = 4e-05
Identities = 42/147 (28%), Positives = 52/147 (35%), Gaps = 47/147 (31%)
Query: 98 FRAGGRGRGGGE-GGGGERLLFLLFRA------------------------------LSR 126
F GG G GGG GGGG L LF+A ++
Sbjct: 80 FGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAK 139
Query: 127 PCSAPTGPEHGWRPQPGREGG--------------RAGAESETAPPPRTNKHRRLQPEPA 172
P S P+GP P PG G G++ ++ PPP + R +Q P
Sbjct: 140 PFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 173 PR--PPPPAASFQPGSALQPPPAPPRR 197
R PP P QP PPP P R
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPPPFPGNR 226
Score = 45.1 bits (105), Expect = 9e-05
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 125 SRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP-PRTNKHRRLQPEPAPRPPPPAASFQ 183
SRP P P + R R + S + PP P + L P P+ RPPPP
Sbjct: 314 SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP 373
Query: 184 PGSALQPPPAPPRRDDSASLRCSVLP--PARRAVAAALGKWRPSSFSLPP 231
S PPP P R+ S S P P+R V + RP LPP
Sbjct: 374 GRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP---PLPP 420
Score = 43.1 bits (100), Expect = 3e-04
Identities = 54/194 (27%), Positives = 71/194 (36%), Gaps = 38/194 (19%)
Query: 52 APGE--GPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGE 109
+PG GPP P P P P GS +P +P P ST ++ RG
Sbjct: 154 SPGHRSGPPE-PQRNRMPPPRPDVGS--KPDSIPP-----PVPSTPRPIQSSPHNRGSPP 205
Query: 110 GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPP-----PRTNKH 164
GG R +P PT P P PG G G S P P +N+
Sbjct: 206 VPGGPR----------QPSPGPTPP-----PFPGNRGTALGGGSIRQSPLSSSSPFSNRP 250
Query: 165 RRLQPEPA------PRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPA-RRAVAA 217
L P P+ P PPPP +P + P PP +++ + + P A +A
Sbjct: 251 P-LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP 309
Query: 218 ALGKWRPSSFSLPP 231
RP LPP
Sbjct: 310 PPPPSRPGPPPLPP 323
Score = 42.4 bits (98), Expect = 6e-04
Identities = 45/164 (27%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 57 PPHTPALGATPSPDPQQGSPE-----RPFKVPGVFS-----TLPCLSTALTFRAGGRGRG 106
PP P PSP + G PE P P V S P ST ++ RG
Sbjct: 143 PPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRG 202
Query: 107 GGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRR 166
GG R +P PT P P PG G G S P ++
Sbjct: 203 SPPVPGGPR----------QPSPGPTPP-----PFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 167 LQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPP 210
+P P PP P+ + +PPP PP + S+ +PP
Sbjct: 248 NRP---PLPPTPSRALDD----KPPPPPPPVGNRPSIHREAVPP 284
Score = 31.6 bits (70), Expect = 1.0
Identities = 53/211 (25%), Positives = 65/211 (30%), Gaps = 48/211 (22%)
Query: 23 GGSFTGINHVLQAAFLNRTPKEKLANEAAAPGEGPPHTPALG--------ATPSPDPQQG 74
GGS + F NR P + A + PP P +G A P P PQ
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRAL-DDKPPPPPPPVGNRPSIHREAVPPPPPQNN 290
Query: 75 SPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGG-----EGGGGERLLFLLFRALSRPCS 129
P P + P S+ R G G + L R LS S
Sbjct: 291 KPPVPS------TPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS 344
Query: 130 APTGPEHGW----------------RPQPGREG--------GRAGAESETAP--PPRTNK 163
P P G R PGR G R G+ S P P ++
Sbjct: 345 TPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSR 404
Query: 164 HRRLQPEPAPRPPPPAASFQPGSALQPPPAP 194
P PRPP P +P + PPP P
Sbjct: 405 SGVDSPRSGPRPPLPPD--RPSAGAPPPPPP 433
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 45.8 bits (107), Expect = 5e-05
Identities = 65/231 (28%), Positives = 77/231 (33%), Gaps = 36/231 (15%)
Query: 57 PPHTPALGATPSPDP--QQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGE 114
PP P + P+P Q SP R G S + R G GGG
Sbjct: 101 PPFAPGRISPPAPQAFLAQRSPARASPGGGFTSA----------EGKRKTRPAGRGGGRT 150
Query: 115 RLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPR 174
R R ++ P SA P G P P G + A P R + R LQP A
Sbjct: 151 R------RVVAAPESAAAAP--GRSPSPADPGSTSSATR--VPRARRSSRRALQPRHAA- 199
Query: 175 PPPPAASFQPGSALQPPPAP----------PR---RDDSASLRCSVLPPARRAVAAALGK 221
P P A + S PPPAP PR R L S P + L
Sbjct: 200 PDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSL 259
Query: 222 WRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPG 272
R + + PP + E GE R E Q R RL P P G
Sbjct: 260 ERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAPFG 310
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 45.8 bits (107), Expect = 5e-05
Identities = 65/209 (31%), Positives = 76/209 (36%), Gaps = 53/209 (25%)
Query: 99 RAGGRGRGGGEGGGGERLLFLLFRALSRPCSAPTGPEH---GWRPQ---PGREGGRAG-- 150
R G R G G G L FR P P G P PGRE GR G
Sbjct: 130 RVSGAPRAHGTGAHGTGALRGDFRQCREPARTPQAASRDGDGASPALSAPGREPGRGGRP 189
Query: 151 -------AESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASL 203
A S + PP R+ H P+ R P P + L PPP RRD
Sbjct: 190 ARRTTQRAASSSLPPRRSEGH----PDAPHRSPRPLYRW-----LGPPP---RRDWMRE- 236
Query: 204 RCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLR 263
V A G P F L+RRE ++ AG RR EG R RR
Sbjct: 237 ---------DGVGAGGGPQEPR------FPLRRREARSAVVAGPRR----EGSARSRRAA 277
Query: 264 LRRPRGPPGGAAAAASVMAPRRSRCFCTS 292
RR + PG A+A R+R F +S
Sbjct: 278 RRRRQLQPGPPASA------ERARMFDSS 300
Score = 32.3 bits (72), Expect = 0.59
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 23/117 (19%)
Query: 99 RAGGRGRGGGE----GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESE 154
R+ G +G G GG E LL L R GP+ P+ R GG G
Sbjct: 390 RSEGHEKGKGNYWTFAGGCESLLDLFENGNYRRRRRRRGPKREG-PRGPRAGGAQGPSGP 448
Query: 155 TAPPPRTNKHRRLQP----EPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSV 207
+ PP RL P E AP PPA+ PAPP ++ L+ S+
Sbjct: 449 SEPPAAQG---RLAPDSAGEGAPGREPPAS-----------PAPPGKEHPRDLKFSI 491
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 45.8 bits (107), Expect = 5e-05
Identities = 65/231 (28%), Positives = 77/231 (33%), Gaps = 36/231 (15%)
Query: 57 PPHTPALGATPSPDP--QQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGE 114
PP P + P+P Q SP R G S + R G GGG
Sbjct: 101 PPFAPGRISPPAPQAFLAQRSPARASPGGGFTSA----------EGKRKTRPAGRGGGRT 150
Query: 115 RLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPR 174
R R ++ P SA P G P P G + A P R + R LQP A
Sbjct: 151 R------RVVAAPESAAAAP--GRSPSPADPGSTSSATR--VPRARRSSRRALQPRHAA- 199
Query: 175 PPPPAASFQPGSALQPPPAP----------PR---RDDSASLRCSVLPPARRAVAAALGK 221
P P A + S PPPAP PR R L S P + L
Sbjct: 200 PDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSL 259
Query: 222 WRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPG 272
R + + PP + E GE R E Q R RL P P G
Sbjct: 260 ERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAPFG 310
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 45.8 bits (107), Expect = 5e-05
Identities = 65/209 (31%), Positives = 76/209 (36%), Gaps = 53/209 (25%)
Query: 99 RAGGRGRGGGEGGGGERLLFLLFRALSRPCSAPTGPEH---GWRPQ---PGREGGRAG-- 150
R G R G G G L FR P P G P PGRE GR G
Sbjct: 122 RVSGAPRAHGTGAHGTGALRGDFRQCREPARTPQAASRDGDGASPALSAPGREPGRGGRP 181
Query: 151 -------AESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASL 203
A S + PP R+ H P+ R P P + L PPP RRD
Sbjct: 182 ARRTTQRAASSSLPPRRSEGH----PDAPHRSPRPLYRW-----LGPPP---RRDWMRE- 228
Query: 204 RCSVLPPARRAVAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLR 263
V A G P F L+RRE ++ AG RR EG R RR
Sbjct: 229 ---------DGVGAGGGPQEPR------FPLRRREARSAVVAGPRR----EGSARSRRAA 269
Query: 264 LRRPRGPPGGAAAAASVMAPRRSRCFCTS 292
RR + PG A+A R+R F +S
Sbjct: 270 RRRRQLQPGPPASA------ERARMFDSS 292
Score = 32.3 bits (72), Expect = 0.59
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 23/117 (19%)
Query: 99 RAGGRGRGGGE----GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESE 154
R+ G +G G GG E LL L R GP+ P+ R GG G
Sbjct: 453 RSEGHEKGKGNYWTFAGGCESLLDLFENGNYRRRRRRRGPKREG-PRGPRAGGAQGPSGP 511
Query: 155 TAPPPRTNKHRRLQP----EPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSV 207
+ PP RL P E AP PPA+ PAPP ++ L+ S+
Sbjct: 512 SEPPAAQG---RLAPDSAGEGAPGREPPAS-----------PAPPGKEHPRDLKFSI 554
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 45.1 bits (105), Expect = 9e-05
Identities = 58/197 (29%), Positives = 72/197 (36%), Gaps = 50/197 (25%)
Query: 145 EGGRAGAESE---------TAPPPRTNKHRRLQPEPAPRPPP----------PAASFQPG 185
E G AGA S+ +A P + +R P PAP PPP P A +PG
Sbjct: 34 EEGAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPG 93
Query: 186 SALQPPP------APPRRDDSASLRCSVLP--------PARRAVAAALGKWRPSSFSLPP 231
+ + P P R + LRCS PAR V AL + P S P
Sbjct: 94 AFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPP- 152
Query: 232 FNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCT 291
R + E RG+ G + RR+ L GPPG AS + R R F
Sbjct: 153 -----RASPGGRPGSEARGR--SGAECARRVPLH--HGPPG-----ASGVGSERDRKFQL 198
Query: 292 SICGGRGARPQLPRTCG 308
RG P P G
Sbjct: 199 HQTPARG--PPFPGISG 213
Score = 39.3 bits (90), Expect = 0.005
Identities = 57/206 (27%), Positives = 71/206 (34%), Gaps = 54/206 (26%)
Query: 127 PCSAPTGPEHGWRPQ----------PGREGGRAGAESETAPPPRT-------NKHRRLQP 169
P P GP RP+ PG G RA R + +R P
Sbjct: 73 PPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGP 132
Query: 170 EPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAV-------AAALGKW 222
A + PP +F PG A P +P R S + S ARR A+ +G
Sbjct: 133 ARA-QVPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSE 191
Query: 223 RPSSFSL-------PPF-------------NLKRRENGASERAGERRGQGEEGQQRLRRL 262
R F L PPF + R++ A R GE G +R R
Sbjct: 192 RDRKFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARA 251
Query: 263 RLRRPR--------GPPGGAAAAASV 280
LRRPR GPPGG A S+
Sbjct: 252 -LRRPRAPGRAGGGGPPGGGIPACSI 276
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 45.1 bits (105), Expect = 9e-05
Identities = 58/197 (29%), Positives = 72/197 (36%), Gaps = 50/197 (25%)
Query: 145 EGGRAGAESE---------TAPPPRTNKHRRLQPEPAPRPPP----------PAASFQPG 185
E G AGA S+ +A P + +R P PAP PPP P A +PG
Sbjct: 34 EEGAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPG 93
Query: 186 SALQPPP------APPRRDDSASLRCSVLP--------PARRAVAAALGKWRPSSFSLPP 231
+ + P P R + LRCS PAR V AL + P S P
Sbjct: 94 AFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPP- 152
Query: 232 FNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPRRSRCFCT 291
R + E RG+ G + RR+ L GPPG AS + R R F
Sbjct: 153 -----RASPGGRPGSEARGR--SGAECARRVPLH--HGPPG-----ASGVGSERDRKFQL 198
Query: 292 SICGGRGARPQLPRTCG 308
RG P P G
Sbjct: 199 HQTPARG--PPFPGISG 213
Score = 39.3 bits (90), Expect = 0.005
Identities = 57/206 (27%), Positives = 71/206 (34%), Gaps = 54/206 (26%)
Query: 127 PCSAPTGPEHGWRPQ----------PGREGGRAGAESETAPPPRT-------NKHRRLQP 169
P P GP RP+ PG G RA R + +R P
Sbjct: 73 PPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGP 132
Query: 170 EPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAV-------AAALGKW 222
A + PP +F PG A P +P R S + S ARR A+ +G
Sbjct: 133 ARA-QVPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSE 191
Query: 223 RPSSFSL-------PPF-------------NLKRRENGASERAGERRGQGEEGQQRLRRL 262
R F L PPF + R++ A R GE G +R R
Sbjct: 192 RDRKFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARA 251
Query: 263 RLRRPR--------GPPGGAAAAASV 280
LRRPR GPPGG A S+
Sbjct: 252 -LRRPRAPGRAGGGGPPGGGIPACSI 276
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 45.1 bits (105), Expect = 9e-05
Identities = 46/153 (30%), Positives = 55/153 (35%), Gaps = 14/153 (9%)
Query: 124 LSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQ 183
L R SAP P P+P G G +E P QP PP + +
Sbjct: 110 LPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQDTPGGPASEPAQPPGERSADPPLPALE 169
Query: 184 PGSALQPPPA----PPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLP------PFN 233
A + P A PPR A+ CS P A AA G + LP P
Sbjct: 170 LAQATERPSADAAPPPRAPSEAASPCSDPPDAEPGPGAAKGPPQQKPCMLPVRCVPAPAT 229
Query: 234 LKRRENGASERAGERRGQGEEGQQRLRRLRLRR 266
L+ R +E G RR EE R L LRR
Sbjct: 230 LRLR----AEEPGLRRQLSEEPSPRSSPLLLRR 258
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 45.1 bits (105), Expect = 9e-05
Identities = 46/155 (29%), Positives = 54/155 (34%), Gaps = 27/155 (17%)
Query: 47 ANEAAAPGEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRG 106
A E PG PP A A P+P P PE + L LS GG G
Sbjct: 24 AGEDPGPGPAPPPEGAQEAAPAPRPP---PEPDDAAAALRLALDQLSA---LGLGGAGDT 77
Query: 107 GGEGGGGERLLFLLFRALSRPCSAPTGPEHGWRPQP-GREGGRAGAESETAPPPRTNKHR 165
EG G+ +A G + G P+P +G AGA AP
Sbjct: 78 DEEGAAGDG------------AAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAPGSLP 125
Query: 166 RLQPEPAPRPPPPA--------ASFQPGSALQPPP 192
L P +P PPPP A F P A PP
Sbjct: 126 LLDPNASPPPPPPPRPSPPDVFAGFAPHPAALGPP 160
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 44.7 bits (104), Expect = 1e-04
Identities = 78/284 (27%), Positives = 92/284 (32%), Gaps = 80/284 (28%)
Query: 54 GEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGE---- 109
G GPP L P P + P P P AGG+G GGG+
Sbjct: 140 GLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPA-------------PAGGKGEGGGKESAV 186
Query: 110 -----GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKH 164
GGGE + +AP G P RE +A +T
Sbjct: 187 LWKGAEGGGE-------KGNRNMAAAPLG-------DPAREAAQA----------QTGLR 222
Query: 165 RRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRP 224
RR E PRP P+A P+P +RC L P R V AAL +
Sbjct: 223 RRRPLELVPRPALPSA-----------PSP-------RIRC-FLAPGRSRVGAALTE-EQ 262
Query: 225 SSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPR 284
++ L RR+ R G G R RR R GP G A A S R
Sbjct: 263 AAGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEF-RVAGPRGVAEEAESGRGWR 321
Query: 285 RSRCFCTSICGGRGARPQLPRTCGDGTQHCGRGKPALAAAEEWP 328
F GG P C RGK AA EE P
Sbjct: 322 SWPSFSAVSGGGESPDP----------AGCSRGK---AAPEEPP 352
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 44.7 bits (104), Expect = 1e-04
Identities = 78/284 (27%), Positives = 92/284 (32%), Gaps = 80/284 (28%)
Query: 54 GEGPPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGE---- 109
G GPP L P P + P P P AGG+G GGG+
Sbjct: 140 GLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPA-------------PAGGKGEGGGKESAV 186
Query: 110 -----GGGGERLLFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKH 164
GGGE + +AP G P RE +A +T
Sbjct: 187 LWKGAEGGGE-------KGNRNMAAAPLG-------DPAREAAQA----------QTGLR 222
Query: 165 RRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRP 224
RR E PRP P+A P+P +RC L P R V AAL +
Sbjct: 223 RRRPLELVPRPALPSA-----------PSP-------RIRC-FLAPGRSRVGAALTE-EQ 262
Query: 225 SSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAASVMAPR 284
++ L RR+ R G G R RR R GP G A A S R
Sbjct: 263 AAGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEF-RVAGPRGVAEEAESGRGWR 321
Query: 285 RSRCFCTSICGGRGARPQLPRTCGDGTQHCGRGKPALAAAEEWP 328
F GG P C RGK AA EE P
Sbjct: 322 SWPSFSAVSGGGESPDP----------AGCSRGK---AAPEEPP 352
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/194 (26%), Positives = 66/194 (34%), Gaps = 32/194 (16%)
Query: 57 PPHTPALGATPSPDPQQGSPERPFKVPGVFSTLPCLSTALTFRAGGRGRGGGEGGGGERL 116
PP P LG+ P P P P P P +P + F + G
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGT------------- 346
Query: 117 LFLLFRALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKHRRLQPEPAPRPP 176
P S P+ P H P A+ T PPP ++ P P P PP
Sbjct: 347 --------PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398
Query: 177 PPAASFQPGSALQPPPA-PPRRDDSASLRCSVLPPARRAVAAALGKWRPSSFSLPPFNLK 235
PP P + PA PP D+ + S LP A + L R F L+
Sbjct: 399 PPGPPPPPFTGADGQPAIPPPLSDTTKPKSS-LPAVSDARSDLLSAIRQG------FQLR 451
Query: 236 RRENGASERAGERR 249
R E +R E+R
Sbjct: 452 RVE---EQREQEKR 462
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 44.7 bits (104), Expect = 1e-04
Identities = 48/147 (32%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 143 GREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSAS 202
G GG + AE + R + R L P+ +PP QP LQPPP PP
Sbjct: 10 GGGGGLSWAEKKLEE--RRKRRRFLSPQ---QPPLLLPLLQP-QLLQPPPPPPP------ 57
Query: 203 LRCSVLPPARRAVAAALGKWRPSSFSL-PPFNLKRRENG---ASERAGERRG--QGEEGQ 256
+ P A AAA S FS PP +KR G A R RRG G+E +
Sbjct: 58 -LLFLAAPGTAAAAAAAAAASSSCFSPGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAE 116
Query: 257 QRLRRLRLRRPRGPPGGAAAAASVMAP 283
+R R L +P+ GG A++ + P
Sbjct: 117 KR-RVFSLPQPQQDGGGGASSGGGVTP 142
Score = 28.9 bits (63), Expect = 6.6
Identities = 43/161 (26%), Positives = 59/161 (36%), Gaps = 8/161 (4%)
Query: 123 ALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKH---RRLQPEPAPRPPPPA 179
A S C +P P R G+ RAG + PR + RR+ P P+
Sbjct: 75 AASSSCFSPGPPLEVKRLARGKR--RAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGG 132
Query: 180 ASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAA-ALGKWRPSSFSLPPFNLKRRE 238
+ G P S S + +L A A AA A G S S + +R
Sbjct: 133 GASSGGGVT--PLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRR 190
Query: 239 NGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAAS 279
SER R + G+ + R RR G GG+ A+ S
Sbjct: 191 GEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKS 231
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 44.7 bits (104), Expect = 1e-04
Identities = 48/147 (32%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 143 GREGGRAGAESETAPPPRTNKHRRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSAS 202
G GG + AE + R + R L P+ +PP QP LQPPP PP
Sbjct: 10 GGGGGLSWAEKKLEE--RRKRRRFLSPQ---QPPLLLPLLQP-QLLQPPPPPPP------ 57
Query: 203 LRCSVLPPARRAVAAALGKWRPSSFSL-PPFNLKRRENG---ASERAGERRG--QGEEGQ 256
+ P A AAA S FS PP +KR G A R RRG G+E +
Sbjct: 58 -LLFLAAPGTAAAAAAAAAASSSCFSPGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAE 116
Query: 257 QRLRRLRLRRPRGPPGGAAAAASVMAP 283
+R R L +P+ GG A++ + P
Sbjct: 117 KR-RVFSLPQPQQDGGGGASSGGGVTP 142
Score = 28.9 bits (63), Expect = 6.6
Identities = 43/161 (26%), Positives = 59/161 (36%), Gaps = 8/161 (4%)
Query: 123 ALSRPCSAPTGPEHGWRPQPGREGGRAGAESETAPPPRTNKH---RRLQPEPAPRPPPPA 179
A S C +P P R G+ RAG + PR + RR+ P P+
Sbjct: 75 AASSSCFSPGPPLEVKRLARGKR--RAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGG 132
Query: 180 ASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAA-ALGKWRPSSFSLPPFNLKRRE 238
+ G P S S + +L A A AA A G S S + +R
Sbjct: 133 GASSGGGVT--PLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRR 190
Query: 239 NGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGAAAAAS 279
SER R + G+ + R RR G GG+ A+ S
Sbjct: 191 GEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKS 231
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,704,394
Number of Sequences: 37866
Number of extensions: 1446878
Number of successful extensions: 24979
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 1529
Number of HSP's that attempted gapping in prelim test: 13825
Number of HSP's gapped (non-prelim): 8593
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.